NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F049802

Metagenome / Metatranscriptome Family F049802

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049802
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 54 residues
Representative Sequence MSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNRRRHCPSCGRQLRSGCTCR
Number of Associated Samples 124
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.00 %
% of genes near scaffold ends (potentially truncated) 30.82 %
% of genes from short scaffolds (< 2000 bps) 81.51 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.863 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(14.384 % of family members)
Environment Ontology (ENVO) Unclassified
(26.712 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.740 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 43.90%    β-sheet: 2.44%    Coil/Unstructured: 53.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF00589Phage_integrase 39.73
PF00285Citrate_synt 14.38
PF02899Phage_int_SAM_1 13.70
PF13646HEAT_2 4.11
PF01347Vitellogenin_N 2.05
PF00180Iso_dh 2.05
PF13302Acetyltransf_3 1.37
PF00106adh_short 0.68
PF01061ABC2_membrane 0.68
PF13561adh_short_C2 0.68
PF01293PEPCK_ATP 0.68
PF00378ECH_1 0.68
PF02754CCG 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG0372Citrate synthaseEnergy production and conversion [C] 14.38
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 13.70
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 13.70
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 0.68
COG1866Phosphoenolpyruvate carboxykinase, ATP-dependentEnergy production and conversion [C] 0.68
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 0.68

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.86 %
UnclassifiedrootN/A30.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459021|G14TP7Y02IGZNNAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300000953|JGI11615J12901_13099161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300000956|JGI10216J12902_100654285Not Available1060Open in IMG/M
3300002568|C688J35102_118841196Not Available603Open in IMG/M
3300002568|C688J35102_119549328Not Available717Open in IMG/M
3300002568|C688J35102_120538235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1158Open in IMG/M
3300002911|JGI25390J43892_10001618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4712Open in IMG/M
3300004114|Ga0062593_102457013Not Available589Open in IMG/M
3300004153|Ga0063455_101591356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300004643|Ga0062591_101312981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria712Open in IMG/M
3300005093|Ga0062594_101481996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300005093|Ga0062594_101578318Not Available678Open in IMG/M
3300005171|Ga0066677_10133051Not Available1348Open in IMG/M
3300005175|Ga0066673_10050710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2091Open in IMG/M
3300005175|Ga0066673_10109564All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300005176|Ga0066679_10755608Not Available625Open in IMG/M
3300005177|Ga0066690_10657123Not Available698Open in IMG/M
3300005179|Ga0066684_10035094All Organisms → cellular organisms → Bacteria2770Open in IMG/M
3300005179|Ga0066684_10783749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria632Open in IMG/M
3300005181|Ga0066678_10869929Not Available591Open in IMG/M
3300005184|Ga0066671_10482722Not Available795Open in IMG/M
3300005186|Ga0066676_10285507Not Available1088Open in IMG/M
3300005332|Ga0066388_103666273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria784Open in IMG/M
3300005336|Ga0070680_100401022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1169Open in IMG/M
3300005337|Ga0070682_100788105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria771Open in IMG/M
3300005338|Ga0068868_100745524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300005356|Ga0070674_100588090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium939Open in IMG/M
3300005406|Ga0070703_10069489Not Available1173Open in IMG/M
3300005434|Ga0070709_10712630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300005436|Ga0070713_100205042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1782Open in IMG/M
3300005437|Ga0070710_10485009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria844Open in IMG/M
3300005438|Ga0070701_11161976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria546Open in IMG/M
3300005439|Ga0070711_100735507Not Available833Open in IMG/M
3300005440|Ga0070705_100082152All Organisms → cellular organisms → Bacteria1982Open in IMG/M
3300005440|Ga0070705_100793864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300005445|Ga0070708_100038681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4169Open in IMG/M
3300005445|Ga0070708_100088705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2813Open in IMG/M
3300005458|Ga0070681_11021461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria747Open in IMG/M
3300005467|Ga0070706_100418910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1246Open in IMG/M
3300005468|Ga0070707_100015631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7122Open in IMG/M
3300005468|Ga0070707_101146267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria743Open in IMG/M
3300005518|Ga0070699_100079277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2860Open in IMG/M
3300005518|Ga0070699_100471744Not Available1139Open in IMG/M
3300005536|Ga0070697_100814253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria827Open in IMG/M
3300005540|Ga0066697_10600085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria611Open in IMG/M
3300005569|Ga0066705_10518612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria744Open in IMG/M
3300005575|Ga0066702_10373507Not Available868Open in IMG/M
3300005575|Ga0066702_10757640Not Available578Open in IMG/M
3300005586|Ga0066691_10235751Not Available1072Open in IMG/M
3300005713|Ga0066905_100003625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6135Open in IMG/M
3300005764|Ga0066903_100004161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12130Open in IMG/M
3300005764|Ga0066903_104618465Not Available734Open in IMG/M
3300006028|Ga0070717_10353536Not Available1314Open in IMG/M
3300006034|Ga0066656_10334932Not Available978Open in IMG/M
3300006046|Ga0066652_100568416Not Available1064Open in IMG/M
3300006175|Ga0070712_101181052Not Available665Open in IMG/M
3300006579|Ga0074054_11487272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria792Open in IMG/M
3300006791|Ga0066653_10133089Not Available1185Open in IMG/M
3300006800|Ga0066660_10482805All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300006804|Ga0079221_11099305Not Available608Open in IMG/M
3300006806|Ga0079220_10109453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1450Open in IMG/M
3300006847|Ga0075431_100046291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4485Open in IMG/M
3300006852|Ga0075433_11403939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria604Open in IMG/M
3300006854|Ga0075425_100002512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria18412Open in IMG/M
3300006904|Ga0075424_102186048Not Available582Open in IMG/M
3300006914|Ga0075436_100221170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1344Open in IMG/M
3300006954|Ga0079219_11409151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria623Open in IMG/M
3300009036|Ga0105244_10441589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300009137|Ga0066709_100499063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1713Open in IMG/M
3300009174|Ga0105241_10161309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1843Open in IMG/M
3300009176|Ga0105242_10191652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1810Open in IMG/M
3300010043|Ga0126380_10260190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1208Open in IMG/M
3300010301|Ga0134070_10051073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1395Open in IMG/M
3300010320|Ga0134109_10016494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2215Open in IMG/M
3300010323|Ga0134086_10059272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1309Open in IMG/M
3300010337|Ga0134062_10538935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria592Open in IMG/M
3300010359|Ga0126376_12472797Not Available567Open in IMG/M
3300010364|Ga0134066_10018658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia1510Open in IMG/M
3300010371|Ga0134125_10033694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5707Open in IMG/M
3300012198|Ga0137364_11294864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300012199|Ga0137383_10680761Not Available752Open in IMG/M
3300012200|Ga0137382_10729575Not Available711Open in IMG/M
3300012201|Ga0137365_10099963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2183Open in IMG/M
3300012201|Ga0137365_10857606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300012202|Ga0137363_10160654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1773Open in IMG/M
3300012205|Ga0137362_11411847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria582Open in IMG/M
3300012208|Ga0137376_10663090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria901Open in IMG/M
3300012211|Ga0137377_10172903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2073Open in IMG/M
3300012212|Ga0150985_116628924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300012350|Ga0137372_10025457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5481Open in IMG/M
3300012350|Ga0137372_10153246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1880Open in IMG/M
3300012354|Ga0137366_10379057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1032Open in IMG/M
3300012356|Ga0137371_10002102All Organisms → cellular organisms → Bacteria15826Open in IMG/M
3300012362|Ga0137361_10409591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1245Open in IMG/M
3300012362|Ga0137361_11374041Not Available630Open in IMG/M
3300012469|Ga0150984_118380302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria529Open in IMG/M
3300012951|Ga0164300_10024943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2123Open in IMG/M
3300012955|Ga0164298_10205846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1154Open in IMG/M
3300012975|Ga0134110_10417735Not Available598Open in IMG/M
3300012977|Ga0134087_10609411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300012986|Ga0164304_10117708All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300013100|Ga0157373_11273069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300014150|Ga0134081_10038675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1402Open in IMG/M
3300014326|Ga0157380_11218504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria797Open in IMG/M
3300015077|Ga0173483_10657770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300015357|Ga0134072_10225877Not Available661Open in IMG/M
3300017657|Ga0134074_1261063Not Available625Open in IMG/M
3300017792|Ga0163161_10653268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria872Open in IMG/M
3300018027|Ga0184605_10036398Not Available2053Open in IMG/M
3300018027|Ga0184605_10113795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1201Open in IMG/M
3300018028|Ga0184608_10216319Not Available841Open in IMG/M
3300018051|Ga0184620_10271424Not Available570Open in IMG/M
3300018054|Ga0184621_10126880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria914Open in IMG/M
3300018071|Ga0184618_10004631All Organisms → cellular organisms → Bacteria3768Open in IMG/M
3300018071|Ga0184618_10125326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1030Open in IMG/M
3300018431|Ga0066655_10148543Not Available1388Open in IMG/M
3300018433|Ga0066667_10000755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11419Open in IMG/M
3300018433|Ga0066667_10386492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1126Open in IMG/M
3300019356|Ga0173481_10602715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300019789|Ga0137408_1275628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria729Open in IMG/M
3300019875|Ga0193701_1017645Not Available1446Open in IMG/M
3300019875|Ga0193701_1049824Not Available848Open in IMG/M
3300020012|Ga0193732_1032903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria895Open in IMG/M
3300021560|Ga0126371_13945283Not Available500Open in IMG/M
3300025910|Ga0207684_10134552All Organisms → cellular organisms → Bacteria2122Open in IMG/M
3300025910|Ga0207684_10179640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1824Open in IMG/M
3300025926|Ga0207659_11075844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300025930|Ga0207701_11416635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300026312|Ga0209153_1005019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4138Open in IMG/M
3300026343|Ga0209159_1118680Not Available1120Open in IMG/M
3300027765|Ga0209073_10190618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria775Open in IMG/M
3300028778|Ga0307288_10080668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1162Open in IMG/M
3300028784|Ga0307282_10109464Not Available1288Open in IMG/M
3300028787|Ga0307323_10079688Not Available1167Open in IMG/M
3300028807|Ga0307305_10062679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1714Open in IMG/M
3300028872|Ga0307314_10052846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1024Open in IMG/M
3300028876|Ga0307286_10043007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1518Open in IMG/M
3300028878|Ga0307278_10550113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300028881|Ga0307277_10001032All Organisms → cellular organisms → Bacteria10753Open in IMG/M
3300028881|Ga0307277_10034294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2032Open in IMG/M
3300028881|Ga0307277_10039886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1892Open in IMG/M
3300028881|Ga0307277_10377560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria632Open in IMG/M
3300030336|Ga0247826_11760712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300031847|Ga0310907_10265784Not Available850Open in IMG/M
3300034268|Ga0372943_0052422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2284Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.05%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.68%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.68%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459021Litter degradation NP4EngineeredOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4NP_016659702170459021Switchgrass, Maize And Mischanthus LitterMSLGQHALGLLASSFCVGLLMTLAGIQKSLLGWKNRRRYCQSYGRQLRSGCTCR
JGI11615J12901_1309916123300000953SoilMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRS
JGI10216J12902_10065428513300000956SoilVALDPHAFGLFASTFCIALLMTLSGIHKSLLGWKNGRRYCQSCGRQLRSGCTCR*
C688J35102_11884119623300002568SoilMSLDPHVVGLIASTVCIALLMALSGIEKSALEWKPRRRICQSCGRQLRSGCICH*
C688J35102_11954932823300002568SoilMSLSPHVFGLFASTFCVALLMTLSGIQKSLLDWKLRRRHCPSCGRLLRSGCICR*
C688J35102_12053823533300002568SoilMSLDPHVVGLMASTVCIALLMALSGIDKSVLEWKPRRRTCQSCGRQLRSGCSCR*
JGI25390J43892_1000161863300002911Grasslands SoilMSLGPHALALFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0062593_10245701323300004114SoilMPLAPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCR*
Ga0063455_10159135623300004153SoilDKMSLDPHVVGLMASTVCIALLMALSGIEKSVLEWKPRRRTCQSCGRQLRSGCSCR*
Ga0062591_10131298123300004643SoilMSLAPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCR*
Ga0062594_10148199613300005093SoilENCRESGTVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0062594_10157831823300005093SoilMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLDSGGGCRCR*
Ga0066677_1013305133300005171SoilMSLDPHILGLVASTVCTALLMALSGIDKSLLDWKNGRRHCPSCGRQLRSGCICR*
Ga0066673_1005071023300005175SoilMSPDPHTLGLFASAFCVALLMTLSGIQKSVLDWKNRRRHCPACGRQLRSGCICRTNR*
Ga0066673_1010956423300005175SoilMATDPHTLALVVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0066679_1075560823300005176SoilVSLDPHVFGLFASTFCVALLMTLSGIHKSLLGWKNGRRICPSCGRQLRSGCTCR*
Ga0066690_1065712323300005177SoilVSLDPHVFGLFASTFCVALLMTLSGIHKSLLGWKNGRRQCPSCGRQLRSGCTCR*
Ga0066684_1003509413300005179SoilMATDPHTPALVVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0066684_1078374923300005179SoilMSLGPHVLALFASTFCVALLMTLSGIQKSLLGWKNGRRICPSCGRQLRSGCTCR*
Ga0066678_1086992923300005181SoilMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNRRRHCPSCGRQLRSGCTCR
Ga0066671_1048272213300005184SoilMSPDPHTLGLFVSAFCVALLMTLSGIQKSVLDWKNRRRHCPACGRQLRSGCICRLTNRD*
Ga0066676_1028550713300005186SoilMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNRRRHCPSCGRQLRSGCTCR*
Ga0066388_10366627323300005332Tropical Forest SoilMAIDPHALALVVSTLCVGVLMAFSGMQKSVLDWKNRRRLCPSCGRQLRSGCTCR*
Ga0070680_10040102213300005336Corn RhizosphereCRESRTVSLDPHVLGFFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR
Ga0070682_10078810523300005337Corn RhizosphereVSLDPHVLGFFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0068868_10074552423300005338Miscanthus RhizosphereMSLGPHALGLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCSCR*
Ga0070674_10058809023300005356Miscanthus RhizosphereVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0070703_1006948913300005406Corn, Switchgrass And Miscanthus RhizosphereMSLGPHALGLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCTCR*
Ga0070709_1071263023300005434Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLASGCRCR*
Ga0070713_10020504233300005436Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDFKNRRRHCPSCGRRLASGCRCR*
Ga0070710_1048500923300005437Corn, Switchgrass And Miscanthus RhizosphereSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0070701_1116197613300005438Corn, Switchgrass And Miscanthus RhizosphereRAENCRESGTVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0070711_10073550713300005439Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRR
Ga0070705_10008215233300005440Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLDSGGGCRCC*
Ga0070705_10079386423300005440Corn, Switchgrass And Miscanthus RhizosphereMSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0070708_10003868133300005445Corn, Switchgrass And Miscanthus RhizosphereMSLGPHVLGLFGSTFCVALLMTLSGIRKSLLGWKNGRRYCPSCGRLRSYCTCR*
Ga0070708_10008870533300005445Corn, Switchgrass And Miscanthus RhizosphereMSLGPHFLGLFASTFCVALLMALSGIQKSVLDWKNGRRQCPSCGRQLRSGCTCR*
Ga0066687_1048440923300005454SoilVASTVCTALLMALSGIDKSLLDWKNGRRHCPSCGRQLRSGCICR*
Ga0070681_1102146123300005458Corn RhizosphereLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0070706_10041891023300005467Corn, Switchgrass And Miscanthus RhizosphereMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNGRRYCPSCGRQLRSGSGCNCR*
Ga0070707_10001563163300005468Corn, Switchgrass And Miscanthus RhizosphereMMSLGPHVLGLFGSTFCVALLMTLSGIHKSLLGWKNGRRYCPSCGRQLRSGSGCNCR*
Ga0070707_10114626713300005468Corn, Switchgrass And Miscanthus RhizosphereMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNARRYCPSCGRRLRSRSGCSCR*
Ga0070699_10007927733300005518Corn, Switchgrass And Miscanthus RhizosphereMSLGPHVPGLFASTFTVALLMTLSGIRKSLLGWKNGRRYCPSCGRLRSYCTCR*
Ga0070699_10047174413300005518Corn, Switchgrass And Miscanthus RhizosphereVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSG
Ga0070697_10081425313300005536Corn, Switchgrass And Miscanthus RhizosphereMSLGPHVLGLFGSTFCVALLMTLSGIQKSLLGWKNGRRYCPSCGRQLRSGSGCNCR*
Ga0066697_1060008523300005540SoilMATDPHALALVVSTFCVGALMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0066705_1051861223300005569SoilALVVSTLCVGAMMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0066702_1037350723300005575SoilVSLDPHVFGLFASTFCVALLMTLSGIHKSLLGWKNGRRQCPSCGRQL
Ga0066702_1075764013300005575SoilMSLGPHVLALFASTFCVALLMTLSGIQKSLLGWKNGCRICPSCGRQLRSG
Ga0066691_1023575123300005586SoilMSLAPHVLGLFASTFCVALLMTLSGIQKSALDWKNRRRHCPSCGRTLASGCRCR*
Ga0066905_10000362573300005713Tropical Forest SoilMALEPHVLGLFGSTVCVALLMTLSGIHKSLLGWKDVRRCHSCGRQLRSGCTCR*
Ga0066903_10000416143300005764Tropical Forest SoilMALDPHSLALAVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLGSGCICR*
Ga0066903_10461846523300005764Tropical Forest SoilMAIDAHALALVVSTLCVGLLMAFSGMEKSVLDWKNRRRMCPSCGRQLRSGCTCR*
Ga0070717_1035353613300006028Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRL
Ga0066656_1033493223300006034SoilMAKDPHTLALVVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0066652_10056841623300006046SoilMATDPHSLALVVSTLCVGVMMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCTCR*
Ga0070712_10118105223300006175Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLASG
Ga0074054_1148727223300006579SoilMALGPHVLGLFASTVCVALLMTLSGIKKSTLDWKNRRRHCPSCGRRLSSGCTCR*
Ga0066653_1013308923300006791SoilMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0066660_1048280523300006800SoilVSLDPHVFGLFASTFCVALLMTLSGIHKSLLGWKNGRRLCPSCGRQLRSGCTCR*
Ga0079221_1109930523300006804Agricultural SoilMAPDPHSLALVVSTLCVGAMMAFSGMQKSVLEWKNRRRMCPSCGRRLRSGCICR*
Ga0079220_1010945323300006806Agricultural SoilMSLGPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR*
Ga0075431_10004629113300006847Populus RhizosphereCMAPDPHSLALVVSTLCVGAMMAFSGMQKSVLEWKNRRRMCPSCGRRLRSGCICR*
Ga0075433_1140393913300006852Populus RhizosphereAPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR*
Ga0075425_100002512193300006854Populus RhizosphereMSLAPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR*
Ga0075424_10218604813300006904Populus RhizosphereVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRR
Ga0075436_10022117033300006914Populus RhizosphereLAPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR*
Ga0079219_1140915123300006954Agricultural SoilMSLAPHVLGLFASTFSIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR*
Ga0105244_1044158923300009036Miscanthus RhizosphereMSLGPHALGLFASSFCVGLLMTLSGIQKSMLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0066709_10049906323300009137Grasslands SoilMKLEPHALGLFASTFAVALLMALAGIQKSVLEWKNRRRTCPSCGRELRSGCVCR*
Ga0105241_1016130933300009174Corn RhizosphereYLIVGIALGPHALGLFASSFCVGLLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0105242_1019165223300009176Miscanthus RhizosphereVSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0126380_1026019023300010043Tropical Forest SoilMAMDPHALALVVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLHSGCTCR*
Ga0134070_1005107333300010301Grasslands SoilLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0134109_1001649433300010320Grasslands SoilMSPDPHTLGLFASAFCVALLMTLSGIQKSVLDWKNRRRHCPACGRQLRSGCICRLTNRD*
Ga0134086_1005927213300010323Grasslands SoilKPGRMSLGPHALALFASSFCVALLMTLSGIQKSMLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0134062_1053893523300010337Grasslands SoilALFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0126376_1247279713300010359Tropical Forest SoilMALEPHVLGLFGSTVCVALLMTLSGIHKSLLGWKDVRRCHSCGRQLRSGCT
Ga0134066_1001865813300010364Grasslands SoilMATDPHSLALVVSTLCVGVMMAFSGMQKSVLDWKNRRRHCPACGRQL
Ga0134125_1003369473300010371Terrestrial SoilMLLNPHVVGLIASTVCVALLMALSGIEKSTLEWKPRRRICQSCGRQLRSGCSCR*
Ga0137364_1129486413300012198Vadose Zone SoilKIKRMSPDPHTLGLFASAFCVALLMTLSGIQKSVLDWKNRRRHCPACGRQLRSGCICRTNR*
Ga0137383_1068076113300012199Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSALDWKNRRRHCPSCGRTLASGCRCL*
Ga0137382_1072957523300012200Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSALDWKNRRRHCPSCGRRLASGCRCR*
Ga0137365_1009996323300012201Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSTLDWKNRRRHCPLCGRKLGSGCNCR*
Ga0137365_1085760623300012201Vadose Zone SoilMSFDPHVFGLFASTFCVALLMTLSGIQKSLLSWKQRRRFCPSCGRQLRSGCICR*
Ga0137363_1016065423300012202Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSTLDWKNRRRHCPSCGRTQASGCRCR*
Ga0137362_1141184723300012205Vadose Zone SoilMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNGRRYCPSCGRQLRSGSGCSCG*
Ga0137376_1066309013300012208Vadose Zone SoilPHVLGLFASTFCVALLMTLSGIQKSALDWKNRRRHCPSCGRRLGSGCSCR*
Ga0137377_1017290323300012211Vadose Zone SoilMSLGPHVLGLFASTFCVALLMTLSGIQKRLLGWKNGRRYCPSCGRQLRSGSGCSCR*
Ga0150985_11662892413300012212Avena Fatua RhizosphereENESTMSLDPHVVGLIASTVCIALLMALSGIEKSALEWKPRRRICQSCGRQLRSGCICH*
Ga0137372_1002545753300012350Vadose Zone SoilMSLDPHVLGLFASTVCIALLMTLSGIQKSLLDWKQRRRFCPSCGRQLRSGCTCR*
Ga0137372_1015324613300012350Vadose Zone SoilMSSHPHVVVLVASTFCAALLMTLSGIHKSLLDWKQRNRLCPSCGRQLRSGCICR*
Ga0137366_1037905733300012354Vadose Zone SoilMSSHPHVVVLFASTFCAALLMTLSGIHKSLLDWKQRNRQCPSCGRRLRSGCICR*
Ga0137371_10002102103300012356Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSTLDWKNRRCHCPLCGR*
Ga0137361_1040959113300012362Vadose Zone SoilMSLGPHVLGLFASTFCVALLMTLSGIQKSLLGWKNGRRYCPSCGRQFRSGSGCRCG*
Ga0137361_1137404113300012362Vadose Zone SoilMSLDPHVLGLFASTFCVALLMTLSGIQKSTLDWKNRRRHCPSCGRTLASGCRCR*
Ga0150984_11838030223300012469Avena Fatua RhizosphereVVGMIAATVCVALLMMLSGIEKSALEWKPRRRICHSCGRQLRSGCTCR*
Ga0164300_1002494333300012951SoilMALGPHVLGLFASTFCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLGSGCSCR*
Ga0164298_1020584623300012955SoilMLLDPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLDSGGGCRCC*
Ga0134110_1041773523300012975Grasslands SoilMATDPHTPALVVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLRS
Ga0134087_1060941113300012977Grasslands SoilMKLEPHALALVVSTFCVGALMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCVCR*
Ga0164304_1011770833300012986SoilMLLDPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLDS
Ga0157373_1127306913300013100Corn RhizospherePHVLGFFASTFCVALLMPLSGIQKSRLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0134081_1003867533300014150Grasslands SoilMATDPHSLALVVSTLCVGAMMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR*
Ga0157380_1121850413300014326Switchgrass RhizosphereHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR*
Ga0173483_1065777023300015077SoilSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCTCR*
Ga0134072_1022587713300015357Grasslands SoilMSLDPHILGLVASTVCTALLMALSGIDKSLLDWKNGRRHCPSCGRQLRSG
Ga0134074_126106323300017657Grasslands SoilMATDPHSLALVVSTLCVGVLMAFSGMQKSVLDWKNRRRHCPACGRQLRSGCICRLTNRD
Ga0163161_1065326833300017792Switchgrass RhizosphereLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCTCR
Ga0184605_1003639823300018027Groundwater SedimentMSLDPHVLGLFASTVCIALLMTLSGIQKSLLDWKQRRRFCPSCGRQLRSGCICR
Ga0184605_1011379523300018027Groundwater SedimentMSLGPHALGLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCTCR
Ga0184608_1021631923300018028Groundwater SedimentMSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0184620_1027142423300018051Groundwater SedimentMSLGPHALGLFASSFCIGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0184621_1012688033300018054Groundwater SedimentMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0184618_1000463143300018071Groundwater SedimentMSDPHALGLVASSFCVALLMTLSGIQKSALDWKNRRRQCPSCGRRLRSGCICR
Ga0184618_1012532623300018071Groundwater SedimentMSLGPHALGLFASSFCVALRMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0066655_1014854323300018431Grasslands SoilMATDPHSLALVVSTLCVGAMMAFSGMQKSVLDWKNRRRMCPSCGRRLRSGCICR
Ga0066667_1000075553300018433Grasslands SoilMSLDPHILGLVASTVCTALLMALSGIDKSLLDWKNGRRHCPSCGRQLRSGCICR
Ga0066667_1038649223300018433Grasslands SoilVSLDPHVFGLFASTFCVALLMTLSGIHKSLLGWKNGRRQCPSCGRQLRSGCTCR
Ga0173481_1060271523300019356SoilMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRKLDGGGGCRCR
Ga0137408_127562813300019789Vadose Zone SoilMSLGPHALALFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0193701_101764523300019875SoilMPLDPHVVGLIASTFCIALLMALSGIEKSALDWKPRRGICPSCGRQLRSGCSCR
Ga0193701_104982423300019875SoilMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRLLRSGCTCR
Ga0193732_103290333300020012SoilLSKQNTMPLDPHVVGLIASTFCIALLMALSGIEKSALDWKPRRGICPSCGRQLRSGCSCR
Ga0126371_1394528323300021560Tropical Forest SoilMALDPHSLALAVSTLCVGVLMAFSGMQKSVLDWKNRRRMCPSCGRRLGSGCICR
Ga0207684_1013455223300025910Corn, Switchgrass And Miscanthus RhizosphereMLLAPHVLGLFASTVCVALLMTLSGIQKSTLDWKNRRRHCPSCGRRLDSGGGCRCR
Ga0207684_1017964023300025910Corn, Switchgrass And Miscanthus RhizosphereMSLGPHFLGLFASTFCVALLMALSGIQKSVLDWKNGRRQCPSCGRQLRSGCTCR
Ga0207659_1107584413300025926Miscanthus RhizosphereMSLGPHALGLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCSCR
Ga0207701_1141663523300025930Corn, Switchgrass And Miscanthus RhizosphereAENWRKPGRMSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCTCR
Ga0209153_100501933300026312SoilMSLGPHVLALFASTFCVALLMTLSGIQKSLLGWKNGRRICPSCGRQLRSGCTCR
Ga0209159_111868013300026343SoilMSLGPHALGLFASSFCAALLMTLSGIQKSMLGWKNRRRYCQSCGRQLRSGCTCR
Ga0209073_1019061823300027765Agricultural SoilMSLGPHVLGLFASTFCIALLMTLSGIHKSVLGWKNGRRYCHSCGRQLRSGCTCRWLR
Ga0307288_1008066823300028778SoilMPLDPHVVGLIASTLCVALLMALSGIEKSALDWKPRRGICPSCGRQFRSGCSCR
Ga0307282_1010946433300028784SoilMSLDPHVLGLFASTVCIALLMTLSGVQKSLLDWKQRRRFCQSCGRQLRSGCICH
Ga0307323_1007968823300028787SoilMSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRHRYCQSCGRQLRSGCTCR
Ga0307305_1006267923300028807SoilMSLDPHVLGLFASTVCIALLMTLSGIQKSLLDWKQRRRFCPSCGRQLRTGCICR
Ga0307314_1005284633300028872SoilNCRNRNTMPLDPHVVGLIASTFCIALLMALSGIEKSALDWKPRRGICPSCGRQLRSGCSC
Ga0307286_1004300723300028876SoilMSLGPHALGLFASSFCVGLLMTLSGIQKSLLGWKNRRRYCQSCGRQLRSGCICR
Ga0307278_1055011323300028878SoilMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQFRSGCTCR
Ga0307277_1000103253300028881SoilMSLDPHVLGLFASTVCIALLMTLSGIQKSLLDWKQRKRFCPSCGRQLRSGCICR
Ga0307277_1003429413300028881SoilMSLGPHALGLFASSFCVALLMTLSGIQKSLLGWKNRRRYCQSCGRQ
Ga0307277_1003988623300028881SoilMMSFDPHVLGLFASTFCIALLMTLSGIQKSLLAWRQRRRFCPSCGRQLRSGCICR
Ga0307277_1037756023300028881SoilMSLSPHVFGLFASTFCVALLMTLSGIQKSLLDWKLRRRHCPSCGRLLRSGCICR
Ga0247826_1176071213300030336SoilPHALGLFASSFCVGLLMTLSGIQKSLLVWKNRRRYCQSCGRQLRSGCTCR
Ga0310907_1026578413300031847SoilVSLDPHVLGLFASTFCVALLMTLSGIQKSLLGWKDGRRYCHSCGRRLRSGCT
Ga0372943_0052422_634_7983300034268SoilMALDPHVVGLFASTVCVALLMALSGIQKSALEWKRQRRHCPTCGRDVRSRCACR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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