Metagenome Family F049805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049805
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	62 residues
Representative Sequence	AMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW
Number of Associated Samples	115
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.48 %
% of genes near scaffold ends (potentially truncated)	88.36 %
% of genes from short scaffolds (< 2000 bps)	87.67 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.260 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (35.616 % of family members)
Environment Ontology (ENVO)	Unclassified (45.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.014 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF12833	HTH_18	4.79
PF00144	Beta-lactamase	3.42
PF03462	PCRF	2.74
PF03544	TonB_C	2.74
PF01965	DJ-1_PfpI	2.74
PF12681	Glyoxalase_2	2.74
PF00924	MS_channel	2.74
PF08543	Phos_pyr_kin	2.05
PF00903	Glyoxalase	1.37
PF00211	Guanylate_cyc	1.37
PF00248	Aldo_ket_red	1.37
PF14534	DUF4440	1.37
PF01274	Malate_synthase	1.37
PF03583	LIP	0.68
PF04030	ALO	0.68
PF00149	Metallophos	0.68
PF13432	TPR_16	0.68
PF07681	DoxX	0.68
PF01402	RHH_1	0.68
PF13620	CarboxypepD_reg	0.68
PF14242	DUF4342	0.68
PF12779	WXXGXW	0.68
PF13715	CarbopepD_reg_2	0.68
PF04945	YHS	0.68
PF02274	ADI	0.68
PF01799	Fer2_2	0.68
PF07719	TPR_2	0.68
PF11376	DUF3179	0.68
PF00069	Pkinase	0.68
PF01810	LysE	0.68
PF00291	PALP	0.68
PF01070	FMN_dh	0.68
PF12275	DUF3616	0.68
PF08447	PAS_3	0.68
PF00085	Thioredoxin	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.42
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.42
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.42
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	2.74
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.74
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	2.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.74
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	2.74
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	2.74
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	2.05
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	2.05
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	2.05
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.05
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.37
COG2225	Malate synthase	Energy production and conversion [C]	1.37
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.68
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.68
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.68
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.68
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.68
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.68
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	2.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.05 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.08 %
Unclassified	root	N/A	2.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.05 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.05 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	15.75 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.74 %
Unclassified	root	N/A	2.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.05 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.75 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.74 %
Unclassified	root	N/A	2.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.05 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	1.37 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.75 %
Unclassified	root	N/A	2.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.05 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.37 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.37 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.68 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.75 %
Unclassified	root	N/A	2.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.05 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1.37 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.37 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	0.68 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.68 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.75 %
Unclassified	root	N/A	2.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.05 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	1.37 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.68 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	0.68 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.68 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.75 %
Unclassified	root	N/A	2.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.05 %
Mucilaginibacter gotjawali	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter gotjawali	0.68 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.68 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	0.68 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.68 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101840629	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002909\|JGI25388J43891_1059923	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004479\|Ga0062595_100805799	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300004479\|Ga0062595_101518383	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300004479\|Ga0062595_102170324	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005167\|Ga0066672_10075629	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300005175\|Ga0066673_10226356	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005176\|Ga0066679_10624619	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005179\|Ga0066684_10504660	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300005179\|Ga0066684_10741121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300005179\|Ga0066684_10873562	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005184\|Ga0066671_10885117	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005186\|Ga0066676_10115852	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300005340\|Ga0070689_101799316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	558	Open in IMG/M
3300005434\|Ga0070709_11243311	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005436\|Ga0070713_101382082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300005437\|Ga0070710_10326036	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300005447\|Ga0066689_10075835	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300005447\|Ga0066689_10211110	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300005454\|Ga0066687_10182059	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005518\|Ga0070699_102214552	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005535\|Ga0070684_100006749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	8899	Open in IMG/M
3300005539\|Ga0068853_100026265	All Organisms → cellular organisms → Bacteria	4889	Open in IMG/M
3300005546\|Ga0070696_101027880	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005547\|Ga0070693_100395423	Not Available	957	Open in IMG/M
3300005554\|Ga0066661_10032696	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300005555\|Ga0066692_10932288	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005559\|Ga0066700_10008289	All Organisms → cellular organisms → Bacteria → Proteobacteria	5239	Open in IMG/M
3300005559\|Ga0066700_10352409	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005559\|Ga0066700_10806422	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005559\|Ga0066700_11026400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300005559\|Ga0066700_11164080	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005560\|Ga0066670_10836416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300005561\|Ga0066699_10497871	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005561\|Ga0066699_10671667	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005561\|Ga0066699_10880915	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005563\|Ga0068855_100943044	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300005568\|Ga0066703_10137140	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005569\|Ga0066705_10412590	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005569\|Ga0066705_10442154	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005569\|Ga0066705_10834020	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005575\|Ga0066702_10301293	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005576\|Ga0066708_10075865	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300005576\|Ga0066708_10528104	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005576\|Ga0066708_10553383	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005586\|Ga0066691_10743124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300005598\|Ga0066706_10757835	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005598\|Ga0066706_11359823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300005764\|Ga0066903_100232294	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300005764\|Ga0066903_106148386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300005764\|Ga0066903_108380046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	528	Open in IMG/M
3300006032\|Ga0066696_11059739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300006175\|Ga0070712_100907034	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300006175\|Ga0070712_101393536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300006794\|Ga0066658_10318014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	831	Open in IMG/M
3300006794\|Ga0066658_10709341	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006796\|Ga0066665_10028444	All Organisms → cellular organisms → Bacteria	3629	Open in IMG/M
3300006797\|Ga0066659_10135952	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300006797\|Ga0066659_10875761	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006797\|Ga0066659_11280399	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006797\|Ga0066659_11803275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
3300006800\|Ga0066660_10035096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3129	Open in IMG/M
3300006804\|Ga0079221_10346583	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006871\|Ga0075434_100252646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1782	Open in IMG/M
3300006954\|Ga0079219_10137588	All Organisms → cellular organisms → Bacteria → Acidobacteria	1279	Open in IMG/M
3300007255\|Ga0099791_10420783	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300007258\|Ga0099793_10329646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300009012\|Ga0066710_102048392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300009012\|Ga0066710_102352993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	773	Open in IMG/M
3300009012\|Ga0066710_102581496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	731	Open in IMG/M
3300009038\|Ga0099829_11721110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300009093\|Ga0105240_10218992	All Organisms → cellular organisms → Bacteria	2219	Open in IMG/M
3300009093\|Ga0105240_12680965	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009093\|Ga0105240_12744026	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300009098\|Ga0105245_11311881	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300009137\|Ga0066709_103750988	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009137\|Ga0066709_104094981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300009174\|Ga0105241_10922087	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300009545\|Ga0105237_12133390	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010304\|Ga0134088_10252296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	849	Open in IMG/M
3300010320\|Ga0134109_10222910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	703	Open in IMG/M
3300010326\|Ga0134065_10175801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300010360\|Ga0126372_11007399	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300010371\|Ga0134125_10597940	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter gotjawali	1219	Open in IMG/M
3300010375\|Ga0105239_10072148	All Organisms → cellular organisms → Bacteria	3795	Open in IMG/M
3300010400\|Ga0134122_11086839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300012198\|Ga0137364_11358398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300012198\|Ga0137364_11465266	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012200\|Ga0137382_10062335	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300012200\|Ga0137382_10520180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	846	Open in IMG/M
3300012202\|Ga0137363_10598296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	931	Open in IMG/M
3300012209\|Ga0137379_10754062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	878	Open in IMG/M
3300012362\|Ga0137361_11929955	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012582\|Ga0137358_10936186	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012917\|Ga0137395_11001624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	598	Open in IMG/M
3300012917\|Ga0137395_11279059	Not Available	508	Open in IMG/M
3300012923\|Ga0137359_10220987	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300012948\|Ga0126375_11193407	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012961\|Ga0164302_10435812	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300012971\|Ga0126369_11569555	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300012975\|Ga0134110_10133112	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300012984\|Ga0164309_11332405	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012986\|Ga0164304_10694619	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012987\|Ga0164307_10116654	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300013100\|Ga0157373_10064457	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300013297\|Ga0157378_10850812	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300013307\|Ga0157372_12029108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300014166\|Ga0134079_10339070	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300015264\|Ga0137403_11103234	Not Available	639	Open in IMG/M
3300017930\|Ga0187825_10339530	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018071\|Ga0184618_10257594	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300018433\|Ga0066667_11612888	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300018468\|Ga0066662_10105332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2012	Open in IMG/M
3300020001\|Ga0193731_1071061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300020022\|Ga0193733_1097426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300020059\|Ga0193745_1023847	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300020580\|Ga0210403_11496746	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300021413\|Ga0193750_1019857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1616	Open in IMG/M
3300024178\|Ga0247694_1009403	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300025862\|Ga0209483_1189696	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025909\|Ga0207705_10074892	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	2458	Open in IMG/M
3300025928\|Ga0207700_10505780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300025929\|Ga0207664_11601023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	573	Open in IMG/M
3300025931\|Ga0207644_11315613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300026041\|Ga0207639_10025382	All Organisms → cellular organisms → Bacteria	4297	Open in IMG/M
3300026277\|Ga0209350_1095557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300026308\|Ga0209265_1140458	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300026309\|Ga0209055_1022096	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300026312\|Ga0209153_1191156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300026315\|Ga0209686_1033304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1969	Open in IMG/M
3300026322\|Ga0209687_1306361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	505	Open in IMG/M
3300026323\|Ga0209472_1224102	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300026330\|Ga0209473_1154186	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300026332\|Ga0209803_1013601	All Organisms → cellular organisms → Bacteria	4204	Open in IMG/M
3300026333\|Ga0209158_1219664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300026527\|Ga0209059_1287311	Not Available	555	Open in IMG/M
3300026542\|Ga0209805_1386450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300026552\|Ga0209577_10142853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1891	Open in IMG/M
3300028047\|Ga0209526_10634668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	680	Open in IMG/M
3300028828\|Ga0307312_10374352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300031718\|Ga0307474_10052305	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300031754\|Ga0307475_10988022	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031820\|Ga0307473_10486602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300031945\|Ga0310913_10208760	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300031954\|Ga0306926_11277767	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300031962\|Ga0307479_11712464	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.04%
Host-Associated	Host-Associated	10.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.67%
Plants	Host-Associated → Plants	10.96%
Aquatic	Environmental → Aquatic	1.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Sediment	Environmental → Aquatic → Sediment	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.66%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.37%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	35.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1018406292	3300002245	Forest Soil	MLAKGRMLWSPDSEDAALIFIALLLFFGRAGRVWGIDSYLAKRWPNSPLW*
JGI25388J43891_10599231	3300002909	Grasslands Soil	TGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0062595_1008057991	3300004479	Soil	GALTRVGAAVAGFIFLNYMLSHGRMLWSPDSEDAALVIITIVLFLGRAGRVWGIDGYLAKRWPNSPLW*
Ga0062595_1015183831	3300004479	Soil	WFWSPDSEDAAVFFSALVVLLGAAGRSFGVDAFLAKRWPRVVLW*
Ga0062595_1021703241	3300004479	Soil	MLGKGRNFWSPDSEDAALIIITLLPFGRAGRAFRIDIYLAKRWPKSMLW*
Ga0066672_100756291	3300005167	Soil	SLLTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0066673_102263561	3300005175	Soil	MTGEAVAALSLLTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVHGVDVYLANRWPNSPLW*
Ga0066679_106246191	3300005176	Soil	AEGRMFWSPDSEDAAVFFIALIVFLGRAGRAWGIDSYLAKRWPNSPLW*
Ga0066684_105046601	3300005179	Soil	RVGSTIAMFLFLNYMLAEGRMFWSPDSEDAALIFITILLFFGRAGRAWGIDSYLAKRWPKSPLW*
Ga0066684_107411212	3300005179	Soil	MFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0066684_108735621	3300005179	Soil	FLFAKGRLFWSPDSEDAAVFFSALVCLLGAAGRVWGVDAYLAKRWPRSILW*
Ga0066671_108851172	3300005184	Soil	LFLSYMLAKARMFWSPDSEDAAVFFIALVVFLGRAGRVWGSDAFLARRWPRSWLW*
Ga0066676_101158521	3300005186	Soil	NYMLAKGRMFWSPDSQDAAVFFIALVVFLGRAGRVWGVDAYLAQRWPKSPLW*
Ga0070689_1017993162	3300005340	Switchgrass Rhizosphere	VAMILFVNYMMAKGRWFWSPDSEDAAVFFIALVVLLGRAGRVCGIDSYLARRWPNAPLW*
Ga0070709_112433112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LAKGRWFLSPDSEDAAVFFSALVVMLGAAGRAFGFNVYLARRWPKALIW*
Ga0070713_1013820822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATLFSYLVMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDACLARRWPRSWIW*
Ga0070710_103260362	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ISHATLFSYLVMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDACLARRWPRSWIW*
Ga0066689_100758353	3300005447	Soil	SPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPKSALW*
Ga0066689_102111101	3300005447	Soil	MLAKGHMFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYHAKR*
Ga0066687_101820593	3300005454	Soil	SHATLFSYLVMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSNGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLATRWPRSWIW*
Ga0070699_1022145522	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LGAGVAMLLFLNYMLAEGRIFWSPDSEDAALFFIGLVIFLGRAGRVWGIDSYLAKRWPNSLLW*
Ga0070684_1000067494	3300005535	Corn Rhizosphere	MWSKGRWFWSPDSEDAAVFLIALVLLLAPAGRLFVIDVFLAKKWPRGIL*
Ga0068853_1000262656	3300005539	Corn Rhizosphere	AGVCLLLGVFTRIGGVIAMFLFLNYMFSKGRWFWSPDSEDAAVFFSALVCCIGAAGRVYGIDAYLASRWPRFPLW*
Ga0070696_1010278802	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PDSEDAAVFFSALVVLIGAAGRVWGLDTYLVRRWPRGFIW*
Ga0070693_1003954232	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MFLFLNYMLAKGRMLWSPDSEDAAVLLSALVVALGAAGRSLGVDALLHRRWPRVPAW*
Ga0066661_100326961	3300005554	Soil	MFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW*
Ga0066692_109322881	3300005555	Soil	GRRRFLNYMLAKGHMFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW*
Ga0066700_100082895	3300005559	Soil	MLAKGHMFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW*
Ga0066700_103524091	3300005559	Soil	AMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFFGRAGRVWGVDGYLAKRWPNSPLW*
Ga0066700_108064222	3300005559	Soil	AVAALLLLTGTMTRVGAAVAMFLFLNYMLAKGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRCPKSPLW*
Ga0066700_110264002	3300005559	Soil	LLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0066700_111640802	3300005559	Soil	GVMTRLGALVAASLFLNYMLAEGRIFWSPDSEDAALFFIALVIFLGRAGRVWGIDAYLAKRWPICPLW*
Ga0066670_108364161	3300005560	Soil	SLLTGTLTRVGSTIAMFLFLNYMLAEGRMFWSPDSEDAALIFITILLFFGRAGRAFGIDSYLAKRWPKSPLW*
Ga0066699_104978713	3300005561	Soil	LLTGTLTRVGSTIAMFLFLNYMLAEGRMFWSPDSEDAALIFITILLFFGRAGRAFGIDSYLAKRWPKSPLW*
Ga0066699_106716671	3300005561	Soil	VIAGELTGGISLLFGLGTRIGAAIAMVLFVNYMLAKGRWFWSPDSQDAAVFFEALAVFLGSAGRTFGLDALLFARRAR*
Ga0066699_108809151	3300005561	Soil	MTGEAVAALSLLTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVHGVDVYLAKRWPNSPLW*
Ga0068855_1009430441	3300005563	Corn Rhizosphere	FLFLNYMLAKGRMLWSPDSEDAAVLLSALVVALGAAGRSLGVDALLHRRWPRVPAW*
Ga0066703_101371403	3300005568	Soil	LAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDRYLAKRWSKSPLW*
Ga0066705_104125901	3300005569	Soil	VMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0066705_104421541	3300005569	Soil	MTRLGAAIAMVLFFNYMLAKGRLFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPNARFGNLILNAA*
Ga0066705_108340201	3300005569	Soil	EGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0066702_103012931	3300005575	Soil	GELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLARRWPRSWIW*
Ga0066708_100758654	3300005576	Soil	AVVISHATLFSYLVMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0066708_105281042	3300005576	Soil	LLTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFFARAGRVWGIDAYLAKRWPNSPLW*
Ga0066708_105533831	3300005576	Soil	ALFLFLNYMLAKGRMFWAPDSQDAAVFFIALIVFLGRAGRVWGVDAYLAKRWPKSPLW*
Ga0066691_107431242	3300005586	Soil	GAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0066706_107578351	3300005598	Soil	YMLAKGRMFWAPDSQDAAVFFIALVVFLGRAGRVWGVDDYLAKRWPNSPLW*
Ga0066706_113598232	3300005598	Soil	VMTGELVAAISLLTGTATRIGALIAMFLFLSYMLAKARMFWSPDSEDAAVFFIALVVFLGRAGRVWGMDAFLAKRWPRSWLW*
Ga0066903_1002322943	3300005764	Tropical Forest Soil	SLLTGTLTRVGAAVAGFLFLNYMLAKGRMFWSPDSEDAALFFIALVIFLGRAGRTFGIDSYLAKRWPKSPLW*
Ga0066903_1061483862	3300005764	Tropical Forest Soil	GFLFLNYMLAKGRIFWSPDSEDGALIVITLLLFFGRAGRIFGIDSYLAKRWPKSLLW*
Ga0066903_1083800462	3300005764	Tropical Forest Soil	TMTRLGAAIAMVLFLNYMIAKGRWVWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPNAPLW*
Ga0066696_110597392	3300006032	Soil	TGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0070712_1009070341	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPKSPLW*
Ga0070712_1013935362	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TFWAPDSQDAAVFFIALVVFLGRAGRVFGIDACLARRWPRSWIW*
Ga0066658_103180141	3300006794	Soil	AAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0066658_107093411	3300006794	Soil	AVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFFGRAGRVWGVDGYLAKRWPNSPLW
Ga0066665_100284441	3300006796	Soil	MFLFLNYLLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0066659_101359524	3300006797	Soil	TRLGAAIAMVLFFNYMLAKGRLFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPNARFGNMILNAA*
Ga0066659_108757612	3300006797	Soil	IAMFLFLNYMLAEGRMFWSPDSEDAALIFITILLFFGRAGRAFGIDSYLAKRWPKSPLW*
Ga0066659_112803992	3300006797	Soil	RRFLNYMLAKGHMFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW*
Ga0066659_118032751	3300006797	Soil	YMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPKSALW*
Ga0066660_100350961	3300006800	Soil	FLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFFGRAGRVWGVDGYLAKRWPNSPLW*
Ga0079221_103465833	3300006804	Agricultural Soil	IAMLLFLNYMLAKGRWFLSPDSEDAAVFFSALVVMLGAAGRAFGFDVFLARRWPGALIW*
Ga0075434_1002526461	3300006871	Populus Rhizosphere	LLTGTMTRLGAAVAMVLFFNYMLAKGRLFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPNAPLW*
Ga0079219_101375882	3300006954	Agricultural Soil	FAKGRLFWSPDSEDAAVFFSAMVCCLGAAGRVWGIDAYLARRWPTVFLW*
Ga0099791_104207832	3300007255	Vadose Zone Soil	MTRIGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAHLAKRWPKSALW*
Ga0099793_103296461	3300007258	Vadose Zone Soil	KGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLATRWPRSWIW*
Ga0066710_1020483923	3300009012	Grasslands Soil	VMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW
Ga0066710_1023529932	3300009012	Grasslands Soil	NYMLAEGRMFWSPDSEDAAVLFIALVVFLGRAGRVWGIDGYLAKRWPKSPLW
Ga0066710_1025814963	3300009012	Grasslands Soil	LTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW
Ga0099829_117211101	3300009038	Vadose Zone Soil	MSRERCAISLLTGTMTRVGAAVAMFLFFNYMLAEGRMFWSPDSQDAAVFFIALVVFLGRAGRVWGIDNYLAKRWPKSPLW*
Ga0105240_102189921	3300009093	Corn Rhizosphere	LCTRVGAVIAMFLFLNYLFSKGRWFWSPDSEDAAVFFSALVCLLGAAGRVYGIDAYLARRLPRTFRLFL*
Ga0105240_126809652	3300009093	Corn Rhizosphere	FLFLNYMFSKGRWFWSPDSEDAAVFFSALVCCIGAAGRVYGIDAYLARRWPRSPLW*
Ga0105240_127440262	3300009093	Corn Rhizosphere	NYLFAKGRWFWSPDSEDAAVFFIALVLLLGKAGRFFGVDSYLAKRWPNSFLF*
Ga0105245_113118811	3300009098	Miscanthus Rhizosphere	AIAMLLFVNYMLAKGRMFWSPDSEDAAVFFSALVVCLAAAGRTLGVDALLHRRWPRVTAW
Ga0066709_1037509882	3300009137	Grasslands Soil	AMFLFLNYMLAEGRIFWSPDSEDAALIFITILLFLGRAGRAFGIDSYLAKRWPKSPLW*
Ga0066709_1040949812	3300009137	Grasslands Soil	SHATLFSYLVMTGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0105241_109220872	3300009174	Corn Rhizosphere	AMFLFLNYMFAKGRLFWSPDSEDAAVFFSALVCCLGAPGRVWGIDAYLARRWPRFLLW*
Ga0105237_121333902	3300009545	Corn Rhizosphere	PDSEDAAVFFSALVCCIGAAGRVYGIDGYLARRWPGSKIW*
Ga0134088_102522961	3300010304	Grasslands Soil	EDAAVLFIALVVFLGRAGRVWGIDGYLAKRWPKSPLW*
Ga0134109_102229102	3300010320	Grasslands Soil	AMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0134065_101758011	3300010326	Grasslands Soil	NFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0126372_110073992	3300010360	Tropical Forest Soil	FLFLNYMFAKGRLFWSPDSEDAAVFFSALVCCLGAAGRVWGIDAYLARLWPKIFLW*
Ga0134125_105979403	3300010371	Terrestrial Soil	YMLAKGRWFWSPDSEDAAVFFIALVLFLGRAGRYFGLDSFLEKRWPKAFLI*
Ga0105239_100721484	3300010375	Corn Rhizosphere	IALVLFLNYMWSKGRWFWSPDSEDAAVFFIALVLLLAPAGRLFGIDVFLAKKWPRGILW*
Ga0134122_110868392	3300010400	Terrestrial Soil	LNFMFAKGAWFWSPNSQDAAVFFIALAVFLGRAGRVFGIDYFLEKFNPGSPFW*
Ga0137364_113583981	3300012198	Vadose Zone Soil	LLTGTATRIGAAVAMFLFLNFMLSKGRTFCAPDSQDAAVFFIALVVFLGRAGRVFGIDAHLARRWPRSWIW*
Ga0137364_114652661	3300012198	Vadose Zone Soil	LAKGRMFWSPDSQDAAIFFIALVVFLGRAGRVWGIDAILARRWPRAWLW*
Ga0137382_100623355	3300012200	Vadose Zone Soil	LLLTGTMTRVGAAVAMFLFLNDMLAKGRMLWAPDSQDAGVFFIALVVFLGRAGRVWGVDAYLAKRWTKSPLW*
Ga0137382_105201803	3300012200	Vadose Zone Soil	LTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0137363_105982963	3300012202	Vadose Zone Soil	RMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0137379_107540623	3300012209	Vadose Zone Soil	DAAVFFIALVVFLGRAGRVYGIDAYLAKRWPKSPLW*
Ga0137361_119299551	3300012362	Vadose Zone Soil	ALSLLTGTMTRVGAAVAMFLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPKSSLW*
Ga0137358_109361862	3300012582	Vadose Zone Soil	AAIATFLFLNYMLAKGRMFWSPDSQDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPNSPLW*
Ga0137395_110016241	3300012917	Vadose Zone Soil	DSEDAAVFFIALVVFLARAGRVWGIDRYLARRWPKSPLW*
Ga0137395_112790592	3300012917	Vadose Zone Soil	PDSEDAAVFFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW*
Ga0137359_102209873	3300012923	Vadose Zone Soil	FLFLNFMLAKGRIFWSPDSEDAAVFFSALVCLLGAAGRVWGIDAYLARRRPSSLLG*
Ga0126375_111934073	3300012948	Tropical Forest Soil	FLNFLFAKGRLFWSPDSEDAAVFFSALVCLLGAAGRVWGIDVFIARRWPRVILW*
Ga0164302_104358121	3300012961	Soil	GEVVAGICLLLGLCTRVGAAVAMFLFLNFMLSKGRLFWSPDSEDAAVFFSALVVLIGAAGRVWGLDTYLIRRWHRGFIW*
Ga0126369_115695551	3300012971	Tropical Forest Soil	MFLFLNYMLAKGRLFWAPDSEDAAVFFSALVCLLGAAGRVLGIDAYLARRWPRVFLW*
Ga0134110_101331121	3300012975	Grasslands Soil	GELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW*
Ga0164309_113324051	3300012984	Soil	RMFWSPDSEDAAVFFIALVVFLSGAGRVWGVDSVLAKRWPRSWLW*
Ga0164304_106946191	3300012986	Soil	TGEMFAAVSLLTGTMTRLGAAVAMVLFVNYMMAKGRWFWSPDSEDAAVFFIALVVLLGRAGRVFGVDSYLARRWPNAPLW*
Ga0164307_101166541	3300012987	Soil	TMTRLGAAVAMVLFLNYMMAKGRWFWSPDSEDAAVFFIALVVFLGRAGRVFGIDSYLGRRWPNAPLW*
Ga0157373_100644573	3300013100	Corn Rhizosphere	FLNYLFSKGRWFWSPDSEDAAVFFSALVCLLGAAGRVYGIDAYLARRLPRTFRLFL*
Ga0157378_108508122	3300013297	Miscanthus Rhizosphere	AGELVAGLSLLFGVATRVGAAIAMLLFLSYMLAKGRMFWSPDSEDAAVFFSALVVCLAAAGRTLGVDALLHRRWPRVAAW*
Ga0157372_120291081	3300013307	Corn Rhizosphere	KGRWFWSPDSEDAAVFFSALVCCIGAAGRVYGIDAYLARRWPRAIFW*
Ga0134079_103390701	3300014166	Grasslands Soil	FMLAKARMFWSPDSEDAAVFFIALVVCLARAGRVWGVDAFLARRWPRAWLW*
Ga0137403_111032342	3300015264	Vadose Zone Soil	NYMLAKGRWFWSPDSEDAAVFFIALILFLGKAGRFFGLDSYLSKLFPKII*
Ga0187825_103395302	3300017930	Freshwater Sediment	RAGAAIAMLLFLNYMLAKGRWFLSPDSEDAAVFFSALVVMLGAAGRAFGFDVFLARRWPRALIW
Ga0184618_102575941	3300018071	Groundwater Sediment	MTRVGAAVAMPLFLNYMLAKGRMFWSPDSEDAAVFFIALVVFLGRAGRAWGVDRYLAKSWPKSPLW
Ga0066667_116128881	3300018433	Grasslands Soil	MTGYAVAALSLLTGTMTRVGAAVAMSLFLNYMLAEGRMFWSPDSEDAAVFFIALVVFLGRAGRVHGVDVYLANRWPNSPLW
Ga0066662_101053321	3300018468	Grasslands Soil	AMFLFLNYMLAEGRMLWSPYSEDAAVFFIALVVFFGRAGRVWGVDGYLAKRWPNSPLW
Ga0193731_10710612	3300020001	Soil	MTRVGAAVAMSLFLNYMLAKGRMFWSPDSEDAAVSFIALVVFLGRAGRAWGVDSYVAKSWPKSPLW
Ga0193733_10974261	3300020022	Soil	MTRLGAAVAMSLFLNYMLAKGRMFWSPDSEDAAVFFIALVVFLGRAGRAWGVDSYLAKSWPKSPLW
Ga0193745_10238472	3300020059	Soil	MTRVGAAVAMSLFLNYMLAKGRMFWSPDSEDAAVFFIALVVFLGRAGRAWGVDSYLAKSWPKSPLW
Ga0210403_114967463	3300020580	Soil	KGHMFWSPDSEDAAVFFIALVVFLGRAGRMWGVDGYLAKRWPKSPLW
Ga0193750_10198572	3300021413	Soil	MARVGAAVAMSLFLNYMLAKGRMFWSPDSEDATVFFIALVVFLGRAGRPWGVDSYLAKSWPKSPLW
Ga0247694_10094031	3300024178	Soil	LNYMWAKGRWFWSPDSEDAAVFFSALVVLLGAAGRVFGVDAILARRWPRVLLW
Ga0209483_11896963	3300025862	Arctic Peat Soil	YLFAKGRWFWSPDSEDAAVFFIALVLLLGKAGRFFGVDSYLAKRWPNPFLL
Ga0207705_100748923	3300025909	Corn Rhizosphere	AFIALILFVNYLFAKGRWFWSPDSEDAAVFFIALVLLLGKAGRCFGFDAYLAKRWPDSPL
Ga0207700_105057802	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SPDSEDAALIFITFLLFLGRGGRVWGIDSYLSKRWPNSPLW
Ga0207664_116010232	3300025929	Agricultural Soil	MLDIVDAEAFAAISLLTGTLTRVGAAVAGFLFLNYMLAKGRMFWSPDSEDAALVFIALVIFLGRAGRTFGIDSYLAKRWPKSPLW
Ga0207644_113156131	3300025931	Switchgrass Rhizosphere	QAVVISHATLFSYLVMTGELTAAISLLTGAATRIGAAVAMFLFLNFMLSKGRTFWAPDSQDAAVFFIALVVFLGRAGRVFGIDACLARRWPRSWIW
Ga0207639_100253821	3300026041	Corn Rhizosphere	GELIAGVCLLLGVFTRIGGVIAMFLFLNYMFSKGRWFWSPDSEDAAVFFSALVCCIGAAGRVYGIDAYLASRWPRFPLW
Ga0209350_10955571	3300026277	Grasslands Soil	TGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLAIRWPRSWIW
Ga0209265_11404581	3300026308	Soil	FGLGTRIGAAIAMVLFVNYMLAKGRWFWSPDSQDAAVFFEALAVFLGSAGRTFGLDALLFARRAR
Ga0209055_10220961	3300026309	Soil	MFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW
Ga0209153_11911562	3300026312	Soil	AVSLLTGTLTRVGSTIAMFLFLNYMLAEGRMFWSPDSEDAALIFITILLFFGRAGRAWGIDSYLAKRWPKCPLW
Ga0209686_10333042	3300026315	Soil	MLAKGHMFWSPDSEDAAVFFIALVVFPGRAGRVWGVDWYLAKRWPKSPLW
Ga0209687_13063612	3300026322	Soil	AAVSFIALVVFLGRAGRVWGIDSYLAKRWPKSPLW
Ga0209472_12241022	3300026323	Soil	AIAMVLFVNYMLAKGRWFWSPDSQDAAVFFEALAVFLGSAGRTFGLDALLFARRAR
Ga0209473_11541863	3300026330	Soil	ALFLFLNYMLAKGRMFWAPDSQDAAVFFIALVVFLGRAGRVSGVDAYLAKRWPKSPLW
Ga0209803_10136011	3300026332	Soil	EGRMFWSPDSEDAAVFFIALVVFLGRAGRVWGVDAYLAKRWPKSALW
Ga0209158_12196642	3300026333	Soil	LFLNYMLAEGRMFWSPDSEDAAVFFIALVVFFGRAGRVWGVDGYLAKRWPNSPLW
Ga0209059_12873112	3300026527	Soil	DSEDAAVFFIALVVFLGRAGRIWGIDAILAKRWPRL
Ga0209805_13864501	3300026542	Soil	WSPDSEDAAVFFIALIVFLGRAGRVWGVDSLLACRWPRSPLW
Ga0209577_101428532	3300026552	Soil	SPDSEDAAVFFIALVVFFGRAGRVWGVDTFLARRWPRSWLW
Ga0209526_106346682	3300028047	Forest Soil	FAAISLLTGTLSRLGAVVAGFLFLNYMLAKGRMLWSPDSEDAALIFIALLLFFGRAGRVWGIDSYLAKRWPNSPLW
Ga0307312_103743521	3300028828	Soil	MTRVGAAVAMSLFLNYMLAKGRMFWSPDSEDAAVFFIALVVFLGPAGRAWGVDRYLAKSWPKSPLW
Ga0307474_100523053	3300031718	Hardwood Forest Soil	MTGEACAALSLLTGTLTRVGAAVAGFVFLNYMLSHGRTLWSPDSEDAALVIITIVLFLGRTGRAWGIDSYLAERWPTSPLW
Ga0307475_109880221	3300031754	Hardwood Forest Soil	YMLAEGRMFWSPDSEDAALIFITFLLFFGRAGRSWGIDSYLAKRWPNSPLW
Ga0307473_104866021	3300031820	Hardwood Forest Soil	FIQAVVISHATLFSYLVMSGELTAAISLLTGTATRIGAAVAMFLFLNFMLSKGRMFWAPDSQDAAVFFIALVVFLGRAGRVFGIDAYLATRWPRSWIW
Ga0310913_102087601	3300031945	Soil	MLAKGRLFWSPDSEDAAVFFSALVCLLGAAGRVLGIDAYLARRWPQVLLW
Ga0306926_112777672	3300031954	Soil	IAMFLFLNYMLAKGRMFWSPDSEDAAVFFIGLVVFLGRAGRLWGIDAYLAKRWPNSPLW
Ga0307479_117124641	3300031962	Hardwood Forest Soil	SLFLNYMLAKGRMFWSPDSQDAAVFFIALVVFLSRAGRVWGIDSFLARRWPRSWIW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences