NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F049899

Metagenome Family F049899

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049899
Family Type Metagenome
Number of Sequences 146
Average Sequence Length 96 residues
Representative Sequence QLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Number of Associated Samples 137
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.37 %
% of genes near scaffold ends (potentially truncated) 97.95 %
% of genes from short scaffolds (< 2000 bps) 91.10 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.041 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.274 % of family members)
Environment Ontology (ENVO) Unclassified
(22.603 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(33.562 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 36.46%    β-sheet: 37.50%    Coil/Unstructured: 26.04%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF00005ABC_tran 89.73
PF02653BPD_transp_2 4.79
PF00866Ring_hydroxyl_B 1.37
PF00296Bac_luciferase 0.68
PF01717Meth_synt_2 0.68
PF13555AAA_29 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG55173-phenylpropionate/cinnamic acid dioxygenase, small subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 1.37
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.68
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.04 %
UnclassifiedrootN/A10.96 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000931|JGI12531J12852_10114064Not Available523Open in IMG/M
3300000956|JGI10216J12902_102017238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1051Open in IMG/M
3300003352|JGI26345J50200_1007115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1102Open in IMG/M
3300003618|JGI26381J51731_1064573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300003702|PicMicro_10035794All Organisms → cellular organisms → Bacteria3259Open in IMG/M
3300004002|Ga0055477_10251379All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300004005|Ga0055448_10115064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1020Open in IMG/M
3300004005|Ga0055448_10188403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria803Open in IMG/M
3300004063|Ga0055483_10186304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia671Open in IMG/M
3300004145|Ga0055489_10299882Not Available516Open in IMG/M
3300004278|Ga0066609_10193101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300004280|Ga0066606_10040651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1890Open in IMG/M
3300004463|Ga0063356_102488440All Organisms → cellular organisms → Bacteria → Proteobacteria793Open in IMG/M
3300004479|Ga0062595_102696823All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005367|Ga0070667_102307774Not Available507Open in IMG/M
3300005466|Ga0070685_11288594Not Available558Open in IMG/M
3300005534|Ga0070735_10864640All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005541|Ga0070733_10714893All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005764|Ga0066903_108882802All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005840|Ga0068870_10994090All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300006047|Ga0075024_100036457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2026Open in IMG/M
3300006162|Ga0075030_100789149All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300006172|Ga0075018_10521847All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300006881|Ga0068865_100850769All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300007614|Ga0102946_1349941Not Available554Open in IMG/M
3300007757|Ga0102949_1168282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.610Open in IMG/M
3300009053|Ga0105095_10686055All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300009098|Ga0105245_12988788All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300009174|Ga0105241_11293524All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300009176|Ga0105242_11914498All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300009551|Ga0105238_12729460Not Available530Open in IMG/M
3300009553|Ga0105249_10868423All Organisms → cellular organisms → Bacteria → Proteobacteria968Open in IMG/M
3300009629|Ga0116119_1054866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041027Open in IMG/M
3300009631|Ga0116115_1057439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041026Open in IMG/M
3300009645|Ga0116106_1007985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.4033Open in IMG/M
3300009683|Ga0116224_10642113Not Available508Open in IMG/M
3300009700|Ga0116217_10182238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041388Open in IMG/M
3300009764|Ga0116134_1016064All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3109Open in IMG/M
3300009788|Ga0114923_10686920All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010040|Ga0126308_11250999All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300010048|Ga0126373_12667820All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300010349|Ga0116240_10910778All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300010375|Ga0105239_11949117All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300010399|Ga0134127_10377028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1395Open in IMG/M
3300010399|Ga0134127_11965540All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010400|Ga0134122_11978517All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300010403|Ga0134123_11828962All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300012891|Ga0157305_10300765Not Available503Open in IMG/M
3300013105|Ga0157369_11280861All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300013297|Ga0157378_10598848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041113Open in IMG/M
3300013297|Ga0157378_11911892All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300013306|Ga0163162_12571730All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300014162|Ga0181538_10037959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12043110Open in IMG/M
3300014168|Ga0181534_10269081All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales910Open in IMG/M
3300014307|Ga0075304_1190306All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300014311|Ga0075322_1117472All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300015201|Ga0173478_10799800All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300015372|Ga0132256_102304978All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300016319|Ga0182033_10053071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2760Open in IMG/M
3300016371|Ga0182034_10180522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041615Open in IMG/M
3300016387|Ga0182040_10145596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041681Open in IMG/M
3300016422|Ga0182039_10352991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1235Open in IMG/M
3300016422|Ga0182039_12177128Not Available511Open in IMG/M
3300017936|Ga0187821_10418123All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300017940|Ga0187853_10017220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4101Open in IMG/M
3300017970|Ga0187783_11158402All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300017972|Ga0187781_10773560All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300017972|Ga0187781_11318902All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300017975|Ga0187782_10040438All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense3394Open in IMG/M
3300017975|Ga0187782_10873618All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300017998|Ga0187870_1102854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041101Open in IMG/M
3300018016|Ga0187880_1031723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12042992Open in IMG/M
3300018018|Ga0187886_1215687All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300018030|Ga0187869_10440809All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300018033|Ga0187867_10045247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2667Open in IMG/M
3300018034|Ga0187863_10416283All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300018058|Ga0187766_10473306All Organisms → cellular organisms → Bacteria → Proteobacteria840Open in IMG/M
3300018060|Ga0187765_10353651All Organisms → cellular organisms → Bacteria → Proteobacteria895Open in IMG/M
3300018062|Ga0187784_11255361All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300018085|Ga0187772_10275705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1147Open in IMG/M
3300018086|Ga0187769_10250546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1317Open in IMG/M
3300018086|Ga0187769_10837288All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300018090|Ga0187770_10961460All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300018422|Ga0190265_11823043All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300018429|Ga0190272_11474038All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300018468|Ga0066662_12507688All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300018469|Ga0190270_11095922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root1204829Open in IMG/M
3300020579|Ga0210407_11305920All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300021405|Ga0210387_11525093All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300021444|Ga0213878_10367089All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300021474|Ga0210390_11372303All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300021477|Ga0210398_10660978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria847Open in IMG/M
(restricted) 3300022888|Ga0233428_1036786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2140Open in IMG/M
(restricted) 3300024339|Ga0233445_1164567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens674Open in IMG/M
3300025412|Ga0208194_1028261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria889Open in IMG/M
3300025439|Ga0208323_1034345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria989Open in IMG/M
3300025454|Ga0208039_1064222All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300025477|Ga0208192_1031451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041164Open in IMG/M
3300025593|Ga0210096_1138873All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300025625|Ga0208219_1130720Not Available556Open in IMG/M
3300025667|Ga0209043_1069469Not Available995Open in IMG/M
3300025681|Ga0209263_1031931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense1890Open in IMG/M
3300025916|Ga0207663_10530248All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales918Open in IMG/M
3300025919|Ga0207657_11281510All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300025930|Ga0207701_11368707All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300025961|Ga0207712_10618787All Organisms → cellular organisms → Bacteria → Proteobacteria938Open in IMG/M
3300026116|Ga0207674_11570222Not Available627Open in IMG/M
3300027026|Ga0207814_111755All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041514Open in IMG/M
3300027869|Ga0209579_10562869All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300027879|Ga0209169_10057800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2011Open in IMG/M
3300027986|Ga0209168_10432514All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300028177|Ga0257122_1177158Not Available540Open in IMG/M
3300029943|Ga0311340_11345145Not Available567Open in IMG/M
3300030056|Ga0302181_10419788All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300030524|Ga0311357_10926659All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300030580|Ga0311355_10684914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria955Open in IMG/M
3300030620|Ga0302046_11344213All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300030693|Ga0302313_10287809All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300030739|Ga0302311_10434270All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300031028|Ga0302180_10634654All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300031231|Ga0170824_128796660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense2918Open in IMG/M
3300031232|Ga0302323_102453136All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300031359|Ga0307426_1084362All Organisms → cellular organisms → Bacteria → Proteobacteria1225Open in IMG/M
3300031379|Ga0307434_1106284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria802Open in IMG/M
3300031682|Ga0318560_10629671All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300031693|Ga0302139_10310493All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300031740|Ga0307468_102280330Not Available526Open in IMG/M
3300031788|Ga0302319_10800325All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300031792|Ga0318529_10350952All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300031792|Ga0318529_10622141All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300031795|Ga0318557_10569711All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031798|Ga0318523_10497887All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300031831|Ga0318564_10289046All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300031833|Ga0310917_10171167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. Root12041443Open in IMG/M
3300031833|Ga0310917_11034263Not Available550Open in IMG/M
3300031912|Ga0306921_10286246All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300032001|Ga0306922_11965290All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300032043|Ga0318556_10741294All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300032061|Ga0315540_10203017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria857Open in IMG/M
3300032090|Ga0318518_10595822All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300032091|Ga0318577_10369421All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300032805|Ga0335078_11555772All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300032828|Ga0335080_11087372All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300032892|Ga0335081_11005124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium comanense971Open in IMG/M
3300032898|Ga0335072_11402005All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300034257|Ga0370495_0102655All Organisms → cellular organisms → Bacteria → Proteobacteria888Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.27%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland8.22%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.79%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.79%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.11%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.05%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.05%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.05%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.37%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.37%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.37%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.37%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.37%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.37%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.37%
Aerobic Enrichment MediaEngineered → Lab Enrichment → Defined Media → Aerobic Media → Unclassified → Aerobic Enrichment Media1.37%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.68%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.68%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.68%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.68%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment0.68%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.68%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.68%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.68%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.68%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.68%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.68%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000931Aerobic enrichment media microbial communities from Bioluminiscent Bay, La Parguera, Puerto Rico - Tt and P1 (2)EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003352Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1EnvironmentalOpen in IMG/M
3300003618Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNAEnvironmentalOpen in IMG/M
3300003702Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial AssemblyEnvironmentalOpen in IMG/M
3300004002Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2EnvironmentalOpen in IMG/M
3300004005Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2EnvironmentalOpen in IMG/M
3300004063Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004278Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150mEnvironmentalOpen in IMG/M
3300004280Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100mEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007614Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D1_MGEnvironmentalOpen in IMG/M
3300007757Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D1_MGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009788Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaGEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010349AD_HKTAcaEngineeredOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014307Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300022888 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MGEnvironmentalOpen in IMG/M
3300024339 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_100_MGEnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025593Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025667Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025681Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027026Aerobic enrichment media microbial communities from Bioluminiscent Bay, La Parguera, Puerto Rico - Tt and P1 (2) (SPAdes)EngineeredOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028177Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031359Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40EnvironmentalOpen in IMG/M
3300031379Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031693Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032061Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12531J12852_1011406413300000931Aerobic Enrichment MediaLGQLVLAVGFETSAQNIVQAIIIIASVGLVEAGRRLRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLLDVAPQVRWRWRTAYLRLKKRLDITE*
JGI10216J12902_10201723823300000956SoilVGFETSAQNIVQAIIIIASVGLVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLGRLLDVAPQFRWRLRTAYLRLKKRLEITE*
JGI26345J50200_100711513300003352Bog Forest SoilNPIGGGLRGSVAATIVGALLLTYLGQLVLAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE*
JGI26381J51731_106457323300003618MarineGSVAATIVGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE*
PicMicro_1003579413300003702Marine, Hydrothermal Vent PlumeVGVPEVVKTDLGDVQNIVQAVIIIASVGIVEVGRRIRFEFIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNISPDTRVRLHTAYLRLKKRLDITP*
Ga0055477_1025137913300004002Natural And Restored WetlandsALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGLIEIGRRIKFEWFKFKFWITKPDVEFRIRTTYLRFMAATGLEKIIVFSPETKTRWHGRYLRLKKRLDITP*
Ga0055448_1011506423300004005Natural And Restored WetlandsGGGLRGSVAATIVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVIEAGRRIRIEWIRFKFWVTSKDVEFRISTTASRFMAATGLAKIIQISPELRTKWSVAYRRLKKRLEITE*
Ga0055448_1018840323300004005Natural And Restored WetlandsTVIGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGLIEIGRRIKFEWIKFKFWITKPDVEFRIRTTYLRFMAATGLEKIIVFSPETKTRWHGRYLRLKKRLDITP*
Ga0055483_1018630423300004063Natural And Restored WetlandsTIFGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGFVEVGRRMRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRTAYLRLKKRLEITE*
Ga0055489_1029988213300004145Natural And Restored WetlandsIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTATRLGLSKLLDVAPDVRWRWHAAYLRLKKRLEITE*
Ga0066609_1019310113300004278MarineTIVGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE*
Ga0066606_1004065123300004280MarineALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE*
Ga0063356_10248844013300004463Arabidopsis Thaliana RhizosphereAIIIIASVGIVETGRRLRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0062595_10269682313300004479SoilYLGQLVLAVGFETSAQNIVQAIIIIASVGIVETGRRLRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLARLLNVAPEVRWRWRAAYARLKKRLEITV*
Ga0070667_10230777423300005367Switchgrass RhizosphereFEWIRFKFWVTSPDVEFRIVTTFTRATDRLGLSRFITPDRKGRWGATYMRLKKRLEIIE*
Ga0070685_1128859423300005466Switchgrass RhizosphereVLAVGFETSAQNIVQAVIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLGRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0070735_1086464023300005534Surface SoilVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRVGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0070733_1071489323300005541Surface SoilYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0066903_10888280223300005764Tropical Forest SoilRLRFEWIRFKFWVTSPDVEFRIATTFTRTMTRLGLSRLINVSPQTKGRWGAAYMRLKKRLEIIE*
Ga0068870_1099409023300005840Miscanthus RhizosphereGFETSAQNIVQAVIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLMNVAPQVRWRWRAAYARLKKRLEITE*
Ga0075024_10003645723300006047WatershedsAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0075030_10078914923300006162WatershedsAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0075018_1052184723300006172WatershedsTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0068865_10085076913300006881Miscanthus RhizosphereAVGFETSAQNIVQAVIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLGRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0102946_134994123300007614SoilLVLAVGFQTSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMSRLGLSKLLDVAPQVRWRWRTAYLRLKKRLEITE*
Ga0102949_116828223300007757SoilMGLPPTTTAATVAAVVVGGNPIGGGLRGSVTATIVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMSRLGLSKLLDVAPQVRWRWRTAYLRLKKRLEITE*
Ga0105095_1068605513300009053Freshwater SedimentVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSKLLDVAPQVRWRWRTAYLRLKKRLEITE*
Ga0105245_1298878813300009098Miscanthus RhizospherePIGGGVRGSVAATIVGALLLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVETGRRLRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0105241_1129352413300009174Corn RhizosphereSWRDKPLQSRKSNVEEESINIASGGIVKMNSRIRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLARLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0105242_1191449823300009176Miscanthus RhizosphereMIGGGLRGSVAATIMGALLLTYLGQLVVAVGFDTSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLARLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0105238_1272946023300009551Corn RhizosphereVGIVEVGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLMDVAPEVRWRWRAAYVRLKKKLEITE*
Ga0105249_1086842313300009553Switchgrass RhizosphereQLVLAVGFETSAQNIVQAVIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLGRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0116119_105486623300009629PeatlandGGARGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE*
Ga0116115_105743923300009631PeatlandGGNPIGGGARGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE*
Ga0116106_100798533300009645PeatlandFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE*
Ga0116224_1064211323300009683Peatlands SoilAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLLLKRRLEITE*
Ga0116217_1018223823300009700Peatlands SoilRGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE*
Ga0116134_101606433300009764PeatlandVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE*
Ga0114923_1068692023300009788Deep SubsurfaceGSVAATVVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVIEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTLARLGLSKILDVSTDTKVRWHTRYLRLKKRLDITP*
Ga0126308_1125099913300010040Serpentine SoilASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMTRLGLSKLLDVAPEVRWRWRTAYLRLKKRLEITE*
Ga0126373_1266782013300010048Tropical Forest SoilASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0116240_1091077813300010349Anaerobic Digestor SludgeFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEAGRRIKFEWIRFKFWVTSPDVEFRIRTIYTRTLTRLGLSRLLDVSPETRTRWRTFYLRMKKRLEITE*
Ga0105239_1194911713300010375Corn RhizosphereLRGSVAATIMGALLLTYLGQLVVAIGFDTSAQNIVQAIIIIASVGIVEVGRRARFEWIRFKFWVTSPDIEFRISTTFNRTMTRLGLSKFLDNMSPEVRGRWLARYARLKRRLEITE*
Ga0134127_1037702813300010399Terrestrial SoilEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE*
Ga0134127_1196554023300010399Terrestrial SoilGALLLTYLGQLVVAVGFDTSAQNIVQAIIIIASVGIVEVGRRARFEWIRFKFWVTSPDIEFRISTTFNRTMTRLGLSKFLDNMSPEVRGRWLARYARLKRRLEITE*
Ga0134122_1197851723300010400Terrestrial SoilEWIRFKFWVTSPDIEFRISTTFHRTMTRFGLSKFLDNMSPEVRGRWLARYARLKRRLEITE*
Ga0134123_1182896213300010403Terrestrial SoilIMGALFLTYLGQLVLAVGFETSAQNIVQGIIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLARLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0157305_1030076513300012891SoilAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRAAYLRLKKRLEITE*
Ga0157369_1128086113300013105Corn RhizosphereLTYLGQLVLAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE*
Ga0157378_1059884823300013297Miscanthus RhizosphereAATIVGGLLLTYLGQPVFAVGFETSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSRDVEFRIRTTFTRAMTRLGLARLLNVAPEVRWRWRAAYARLKKRLEITE*
Ga0157378_1191189213300013297Miscanthus RhizosphereVAATIVGALLLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEVGRRARFEWIRFKFWVTSPDIEFRISTTFNRTMTRLGLSKFLDNMSPEVRGRWLARYARLKRRLEITE*
Ga0163162_1257173013300013306Switchgrass RhizosphereAIIIIASVGIVAAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLAKLMDVAPEVRWRWRAAYLRLKKRLEITE*
Ga0181538_1003795923300014162BogFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE*
Ga0181534_1026908123300014168BogLAVGFETSAQNIVQAVIIIASVGIVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE*
Ga0075304_119030623300014307Natural And Restored WetlandsAQNIVQAIIIIASVGLVEVGRRIRFEWIRFKFWVTSPDIEFWIRTNFTRTMTRLGLSKLLDVAPEVRWRWRTAYLRLKKRLEITE*
Ga0075322_111747213300014311Natural And Restored WetlandsQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFWIRTNYTRTMTRLGLGKLLDVAPEVRTRWRTAYLRLKKRLEITE*
Ga0173478_1079980023300015201SoilIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRAAYLRLKKRLEITE*
Ga0132256_10230497823300015372Arabidopsis RhizosphereGNPIGGGLRGRVTATIVGALFLTYLGQLVLAVGFDTSAQNIVQAIIIIASVGIVQVGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLMDVAPEVRWRWRAAYLRLKKRLEITE*
Ga0182033_1005307113300016319SoilAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLRLQRLMNVAPEVRWRWRAAYLRLKKRLEITE
Ga0182034_1018052223300016371SoilGNPIGGGLRGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSSFLNVSPEVRGRWLAAYARLKKRLEITE
Ga0182040_1014559613300016387SoilGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0182039_1035299123300016422SoilQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0182039_1217712823300016422SoilQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLRLQRLMNVAPEVRWRWRAAYLRLKKRLEITE
Ga0187821_1041812313300017936Freshwater SedimentGGGLRGSVAATIVGALLLTYLSQLVIAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDIEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0187853_1001722043300017940PeatlandFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0187783_1115840213300017970Tropical PeatlandGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0187781_1077356023300017972Tropical PeatlandIVQAIIIIASVGVVEVGRRIRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187781_1131890213300017972Tropical PeatlandYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTWLGLAKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187782_1004043843300017975Tropical PeatlandGGNPIGGGLRGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0187782_1087361823300017975Tropical PeatlandIIIASVGVVEVGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLRLAKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187870_110285423300017998PeatlandGGNPIGGGARGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0187880_103172323300018016PeatlandFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE
Ga0187886_121568723300018018PeatlandGARGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0187869_1044080923300018030PeatlandEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0187867_1004524713300018033PeatlandVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE
Ga0187863_1041628323300018034PeatlandGNPIGGGLRGSVAATIVGALLLTYLGQLVLAVGFATSAQNIVQAIIIIASVGIVETGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0187766_1047330623300018058Tropical PeatlandVQAIIIIASVGVVEVGRRIRFVWIRFKFWITSPDVEYRIRTTFTRTVTRLGLTKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187765_1035365123300018060Tropical PeatlandLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0187784_1125536123300018062Tropical PeatlandGQLVLAVGFETSAQNIVQAVIIIASVGVVEVGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRTAYLRLKKRLEITE
Ga0187772_1027570513300018085Tropical PeatlandRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187769_1025054613300018086Tropical PeatlandQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTMFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0187769_1083728813300018086Tropical PeatlandEVGRRIRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRTAYLRLKKRLEITE
Ga0187770_1096146023300018090Tropical PeatlandPIGGGARGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGVVEVGRRIRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRTAYLRLKKRLEITE
Ga0190265_1182304313300018422SoilTIMGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSKLLDVAPQIRWRWRTAYLRLKKKLEITE
Ga0190272_1147403813300018429SoilRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSKLLDVAPEVRWRWRAAYLRLKKRLEITE
Ga0066662_1250768813300018468Grasslands SoilVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTSFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0190270_1109592213300018469SoilGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGLVAAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSKLMDVTPQVRWRLRTAYLRLKKRLEITE
Ga0210407_1130592023300020579SoilAQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0210387_1152509313300021405SoilLRGSVAATIVGALLLTYLGQLVVAVGYATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0213878_1036708913300021444Bulk SoilAQNIVQAIIIIASVGIVEAGRRLRIEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0210390_1137230313300021474SoilIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0210398_1066097813300021477SoilNPIGGGLRGSVAATIVGALLLTYLGQLVIAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEIT
(restricted) Ga0233428_103678623300022888SeawaterNPIGGGVRGSVAATIVGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
(restricted) Ga0233445_116456713300024339SeawaterQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
Ga0208194_102826113300025412PeatlandGSVTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0208323_103434513300025439PeatlandTATILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE
Ga0208039_106422213300025454PeatlandLFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE
Ga0208192_103145113300025477PeatlandTILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWHAAYLRLKRRLEITE
Ga0210096_113887323300025593Natural And Restored WetlandsTVIGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGLIEIGRRIKFEWIKFKFWITKPDVEFRIRTTYLRFMAATGLEKIIVFSPETKTRWHGRYLRLKKRLDITP
Ga0208219_113072023300025625Arctic Peat SoilFDTSAQNIVQAIIIIASVGIVEAGRRIRFEWILFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINVSPEVRGRWGAAYRRLKKRLEIIE
Ga0209043_106946923300025667MarineLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
Ga0209263_103193113300025681MarineALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
Ga0207663_1053024813300025916Corn, Switchgrass And Miscanthus RhizosphereLTYLGQLVLAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRGAYARLKKRLEITE
Ga0207657_1128151013300025919Corn RhizosphereVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0207701_1136870713300025930Corn, Switchgrass And Miscanthus RhizosphereGLRGSVTATIVGALFLTYLGQLVLAVGFETSTQNIVQAIIIIASVGIVAAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLAKLMDVAPEVRWRWRAAYLRLKKRLEITE
Ga0207712_1061878713300025961Switchgrass RhizosphereQNIVQAVIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLGRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0207674_1157022213300026116Corn RhizosphereGIVEVGRRARFEWIRFKFWVTSPDIEFRISTTFNRTMTRLGLSKFLDNMSPEVRGRWLARYARLKRRLEITE
Ga0207814_11175523300027026Aerobic Enrichment MediaRGSVTATIVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGLVEAGRRLRFEWIRFKFWITSPDVEFRIRTTFTRTMTRLGLAKLLDVAPQVRWRWRTAYLRLKKRLDITE
Ga0209579_1056286923300027869Surface SoilLLLTYLGQLVVAVGFATSAQNIVQAVIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0209169_1005780023300027879SoilGGGLRGSVAATIVGALLLTYLAQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0209168_1043251413300027986Surface SoilVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRVGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0257122_117715823300028177MarineSPTVFSGVPYLLATVAAVVVGGNPIGGGVRGSVAATIVGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRSMARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
Ga0311340_1134514523300029943PalsaAVGFSTSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0302181_1041978813300030056PalsaIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0311357_1092665913300030524PalsaRGSIAATIVGALLLTYLGQLVVSVGFSTSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0311355_1068491413300030580PalsaIGGGLRGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQASIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0302046_1134421323300030620SoilLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLDVAPQVRWRWRTAYLRLKKRLEITE
Ga0302313_1028780923300030693PalsaGLRGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0302311_1043427023300030739PalsaVQASIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0302180_1063465413300031028PalsaSVASTIVGALLLTYLSQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIVTTFTRTMTRLGLSRLINISPERRGRWGAAYMRLKKRLEIIE
Ga0170824_12879666013300031231Forest SoilIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWGAAYARLKKRLEITE
Ga0302323_10245313613300031232FenVVSVGYPTSAQNIVQAIIIIASVGIVEAGRRLKFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLARLMDVSPEFRWRLGSFYARLKKRLEITE
Ga0307426_108436213300031359Salt MarshLRGSVTATIVGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSKLLDVAPEVRWRWRTAYLRLKKRLEITE
Ga0307434_110628423300031379Salt MarshTSAQNIVQAIIIIASVGVIEAGRRIRIEWIRFKFWITSKDVEFRISTTASRFMAATGLAKIIQISPELRTKWSVAYRRLKKRLEITE
Ga0318560_1062967113300031682SoilVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0302139_1031049313300031693MarineNPIGGGLRGSVAATVFGALFLTYLGQLVLAVGFETSAQNIVQAVIIIASVGIVEVGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTVARLGLSKLLDNVSSDTRTRMHTAYLRLKRRLEITE
Ga0307468_10228033023300031740Hardwood Forest SoilVGFETSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLAKLMDVAPEVRWRWRAAYLRLKKRLEITE
Ga0302319_1080032513300031788BogLGQLVVSVGFATSAQNIVQAIIIIASVGIVEAGRRIRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLDVSPQVRGRWRAAYARLKKRLEITE
Ga0318529_1035095213300031792SoilGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLRLQRLMNVAPEVRWRWRAAYLRLKKRLEITE
Ga0318529_1062214113300031792SoilGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0318557_1056971123300031795SoilTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0318523_1049788723300031798SoilQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0318564_1028904613300031831SoilASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0310917_1017116713300031833SoilVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTRMMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0310917_1103426323300031833SoilAVGFATSAQNIVQATIIIASVGIVEAGRRLRFEWIRFKFWITSPDVEFRVRTTFTRTITRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0306921_1028624633300031912SoilATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSSFLNVSPEVRGRWLAAYARLKKRLEITE
Ga0306922_1196529023300032001SoilRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLRLQRLMNVAPEVRWRWRAAYLRLKKRLEITE
Ga0318556_1074129413300032043SoilLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTHMITRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0315540_1020301713300032061Salt Marsh SedimentVTATIFGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGFIEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLDVAPEVRWRWRTAYLRLKKRLEITE
Ga0318518_1059582223300032090SoilPIGGGLRGSVAATIVGALLLTYLGQLVVAVGFATSAQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTHMITRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0318577_1036942123300032091SoilQNIVQAIIIIASVGIVEAGRRLRFEWIRFKFWVTSPDVEFRVRTTFTHMITRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0335078_1155577213300032805SoilILGALFLTYLGQLVLAVGFETSAQNIVQAIIIIASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0335080_1108737223300032828SoilVAVGFATSAQNIVQAFIIIASVGIVEAGRRLRFEWIRFKFWVTSRDVEFRIRTTFTRTMTRLGLSRLLNVAPEVRWRWRAAYARLKKRLEITE
Ga0335081_1100512413300032892SoilASVGVVEVGRRLRFEWIRFKFWITSPDVEYRIRTTFTRTMTRLGLAKLLNVAPEVRWRWRAAYLRLKRRLEITE
Ga0335072_1140200513300032898SoilGFATSAQNIVQAIIIIASVGIVEGGRRLRFEWIRFKFWVTSPDVEFRIRTTFTRTMTRLGLSRLLNVAPEARGRWLAAYARLKRRLEITE
Ga0370495_0102655_640_8883300034257Untreated Peat SoilIVQAIIIIASVGIVEVGRRMRFEWIRFKFWITSPDIEFRIRTTFTRTMARLGLSKLLDVAPEVRWRWRTAYLRLKKRLEITE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.