Metagenome / Metatranscriptome Family F049975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049975
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	59 residues
Representative Sequence	TARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Number of Associated Samples	127
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	84.93 %
% of genes from short scaffolds (< 2000 bps)	90.41 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.041 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.973 % of family members)
Environment Ontology (ENVO)	Unclassified (20.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.041 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.42% Coil/Unstructured: 75.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF11706	zf-CGNR	13.70
PF02687	FtsX	9.59
PF03704	BTAD	6.85
PF00456	Transketolase_N	4.79
PF06026	Rib_5-P_isom_A	4.79
PF06224	HTH_42	4.11
PF02366	PMT	3.42
PF01872	RibD_C	3.42
PF00892	EamA	2.74
PF00486	Trans_reg_C	2.74
PF00378	ECH_1	1.37
PF03869	Arc	1.37
PF13751	DDE_Tnp_1_6	1.37
PF13561	adh_short_C2	0.68
PF00196	GerE	0.68
PF05598	DUF772	0.68
PF04542	Sigma70_r2	0.68
PF03473	MOSC	0.68
PF04286	DUF445	0.68
PF09656	PGPGW	0.68
PF04264	YceI	0.68
PF03176	MMPL	0.68
PF02274	ADI	0.68
PF08592	Anthrone_oxy	0.68
PF07702	UTRA	0.68
PF02779	Transket_pyr	0.68
PF02133	Transp_cyt_pur	0.68
PF13424	TPR_12	0.68
PF07690	MFS_1	0.68
PF04545	Sigma70_r4	0.68
PF08282	Hydrolase_3	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	6.85
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	6.85
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	4.79
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	4.79
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	4.79
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	4.11
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	3.42
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	3.42
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.68
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.68
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.68
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.68
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.68
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.68
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.68
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.68
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.68
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.68
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.04 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.04 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.04 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.03 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	71.23 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.85 %
Unclassified	root	N/A	10.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.03 %
Unclassified	root	N/A	10.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.37 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.03 %
Unclassified	root	N/A	10.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.79 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.37 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.03 %
Unclassified	root	N/A	10.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.37 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.68 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Actinocorallia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.03 %
Unclassified	root	N/A	10.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.37 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.68 %
Mycobacterium kyorinense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kyorinense	0.68 %
Actinocorallia herbida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → Actinocorallia herbida	0.68 %
Actinomadura hibisca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura hibisca	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_147471	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005179\|Ga0066684_11128612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kyorinense	500	Open in IMG/M
3300005330\|Ga0070690_100287690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1175	Open in IMG/M
3300005344\|Ga0070661_101101648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300005345\|Ga0070692_11345357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300005434\|Ga0070709_10848625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300005434\|Ga0070709_11188534	All Organisms → cellular organisms → Bacteria → Terrabacteria group	612	Open in IMG/M
3300005434\|Ga0070709_11767938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	505	Open in IMG/M
3300005435\|Ga0070714_101599386	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300005436\|Ga0070713_101429386	Not Available	671	Open in IMG/M
3300005437\|Ga0070710_10435518	Not Available	885	Open in IMG/M
3300005457\|Ga0070662_100231978	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300005459\|Ga0068867_100863937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300005471\|Ga0070698_101195281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300005542\|Ga0070732_10745755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300005712\|Ga0070764_10369974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura hibisca	841	Open in IMG/M
3300005719\|Ga0068861_101836139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300005764\|Ga0066903_101457088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1290	Open in IMG/M
3300005764\|Ga0066903_102233957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1056	Open in IMG/M
3300006028\|Ga0070717_10433897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1183	Open in IMG/M
3300006028\|Ga0070717_11339479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300006163\|Ga0070715_10093502	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300006175\|Ga0070712_101850204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300006175\|Ga0070712_102030801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	503	Open in IMG/M
3300006755\|Ga0079222_12605635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300006854\|Ga0075425_100393933	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300009137\|Ga0066709_101743043	Not Available	879	Open in IMG/M
3300009176\|Ga0105242_10394780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1289	Open in IMG/M
3300009177\|Ga0105248_10890260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300009520\|Ga0116214_1048444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300009520\|Ga0116214_1436343	Not Available	513	Open in IMG/M
3300009553\|Ga0105249_12789478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300010303\|Ga0134082_10069450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1369	Open in IMG/M
3300010339\|Ga0074046_10505640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300010359\|Ga0126376_12288208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300010373\|Ga0134128_11293287	Not Available	804	Open in IMG/M
3300010375\|Ga0105239_10364158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1633	Open in IMG/M
3300010376\|Ga0126381_104724425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300010397\|Ga0134124_12830498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300010401\|Ga0134121_10396969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300010401\|Ga0134121_11709880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300011120\|Ga0150983_11788462	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012209\|Ga0137379_11537161	Not Available	566	Open in IMG/M
3300012351\|Ga0137386_10493141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300012356\|Ga0137371_10684837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300012357\|Ga0137384_10190199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300012517\|Ga0157354_1063832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300012961\|Ga0164302_10522794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300012971\|Ga0126369_11449842	Not Available	776	Open in IMG/M
3300012987\|Ga0164307_10101823	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300012988\|Ga0164306_10215902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1355	Open in IMG/M
3300013100\|Ga0157373_10901373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300014969\|Ga0157376_12626881	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300015372\|Ga0132256_103674538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300016404\|Ga0182037_11347526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300016445\|Ga0182038_11906685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300017792\|Ga0163161_10182429	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300017821\|Ga0187812_1049982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1411	Open in IMG/M
3300017821\|Ga0187812_1074211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300017926\|Ga0187807_1048228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1320	Open in IMG/M
3300017926\|Ga0187807_1121818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300017932\|Ga0187814_10108983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300017942\|Ga0187808_10469502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300017943\|Ga0187819_10652434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300017974\|Ga0187777_10885155	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300018060\|Ga0187765_10104763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1546	Open in IMG/M
3300018060\|Ga0187765_11116809	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300020579\|Ga0210407_10271060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1324	Open in IMG/M
3300021088\|Ga0210404_10442079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	731	Open in IMG/M
3300021171\|Ga0210405_10288958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1296	Open in IMG/M
3300021178\|Ga0210408_11064309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	623	Open in IMG/M
3300021178\|Ga0210408_11222281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300021388\|Ga0213875_10178119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	998	Open in IMG/M
3300021403\|Ga0210397_10147675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1640	Open in IMG/M
3300021405\|Ga0210387_10543047	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300021474\|Ga0210390_10394756	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021478\|Ga0210402_10719288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300021478\|Ga0210402_11726072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	552	Open in IMG/M
3300022529\|Ga0242668_1046392	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300022718\|Ga0242675_1039936	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300024331\|Ga0247668_1028026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1159	Open in IMG/M
3300025898\|Ga0207692_10304225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300025898\|Ga0207692_10338672	All Organisms → cellular organisms → Bacteria → Terrabacteria group	925	Open in IMG/M
3300025898\|Ga0207692_10354445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300025915\|Ga0207693_10010775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	7422	Open in IMG/M
3300025915\|Ga0207693_10410300	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300025916\|Ga0207663_11354843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300025917\|Ga0207660_10504560	Not Available	982	Open in IMG/M
3300025920\|Ga0207649_10990662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300025922\|Ga0207646_10414674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300025933\|Ga0207706_10245484	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300026035\|Ga0207703_11107486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300026118\|Ga0207675_100390082	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300026308\|Ga0209265_1054011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300026552\|Ga0209577_10726793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300027029\|Ga0208731_1001512	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300027030\|Ga0208240_1001197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2728	Open in IMG/M
3300027058\|Ga0209111_1014500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300027855\|Ga0209693_10569703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300027884\|Ga0209275_10279429	Not Available	922	Open in IMG/M
3300027905\|Ga0209415_10091174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3416	Open in IMG/M
3300030007\|Ga0311338_11852911	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300030503\|Ga0311370_11964789	All Organisms → cellular organisms → Bacteria → Terrabacteria group	586	Open in IMG/M
3300031057\|Ga0170834_109727830	Not Available	616	Open in IMG/M
3300031236\|Ga0302324_102741994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300031525\|Ga0302326_10423998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2051	Open in IMG/M
3300031543\|Ga0318516_10851041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300031545\|Ga0318541_10592099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300031549\|Ga0318571_10358019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300031573\|Ga0310915_10522020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	843	Open in IMG/M
3300031679\|Ga0318561_10080856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300031681\|Ga0318572_10035067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2633	Open in IMG/M
3300031681\|Ga0318572_10070955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1917	Open in IMG/M
3300031682\|Ga0318560_10022143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2921	Open in IMG/M
3300031708\|Ga0310686_101281445	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031716\|Ga0310813_12005286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031718\|Ga0307474_10512041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300031719\|Ga0306917_11070379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031751\|Ga0318494_10844289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031765\|Ga0318554_10542197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300031768\|Ga0318509_10109855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1494	Open in IMG/M
3300031771\|Ga0318546_10364006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → Actinocorallia herbida	1007	Open in IMG/M
3300031795\|Ga0318557_10209720	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031821\|Ga0318567_10087338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1671	Open in IMG/M
3300031897\|Ga0318520_10017878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3310	Open in IMG/M
3300031910\|Ga0306923_10350953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300031947\|Ga0310909_10094323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2396	Open in IMG/M
3300032001\|Ga0306922_11888993	Not Available	585	Open in IMG/M
3300032009\|Ga0318563_10380302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300032043\|Ga0318556_10739958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300032063\|Ga0318504_10570700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032066\|Ga0318514_10639138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300032068\|Ga0318553_10772794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300032261\|Ga0306920_101416406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300032261\|Ga0306920_103175823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300032783\|Ga0335079_10036965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5609	Open in IMG/M
3300032893\|Ga0335069_10860614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300032954\|Ga0335083_11509174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300033134\|Ga0335073_11388088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300033134\|Ga0335073_11840563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	563	Open in IMG/M
3300034819\|Ga0373958_0116824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.99%
Host-Associated	Host-Associated	13.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.19%
Plants	Host-Associated → Plants	13.01%
Aquatic	Environmental → Aquatic	4.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.90%
Freshwater	Environmental → Aquatic → Freshwater	4.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Peat	Environmental → Terrestrial → Peat	2.74%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.37%
Loam	Environmental → Terrestrial → Soil → Loam	21.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.16%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.05%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.05%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02701860	2199352024	Soil	DNRVLTARGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0066684_111286121	3300005179	Soil	QAPTDCTGSVSLLWYDPGTRAEQWLIRAPGNVIGVASAVPFYGRQNGNL*
Ga0070690_1002876902	3300005330	Switchgrass Rhizosphere	TTDDNRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0070661_1011016481	3300005344	Corn Rhizosphere	TARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0070692_113453572	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0070709_108486251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TEGDNVVLTATGSRLLVQAPTSCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVENAVPFYSRQNGTM*
Ga0070709_111885342	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RVLTARGSRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL*
Ga0070709_117679382	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RVLTARGSRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGDL*
Ga0070714_1015993862	3300005435	Agricultural Soil	VRHTSGDNRVLTARGSRLLVQAPTDCTGSVSLLWYDPGTRAEQWLIRAPGKVLGVANAVPFYSRQNGNL*
Ga0070713_1014293861	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	HTNGDNRVLTARGSRLLVQAPTDCTGSVSLLWYDPAKRAEQWLIRAPGNVIGVAIAVPFYSRQNGDL*
Ga0070710_104355182	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL*
Ga0066687_103794761	3300005454	Soil	PTDCTGSVSLLWYNPGTQAEQWLIRPPGRVIGVTVAVPFYSRQNGNL*
Ga0070662_1002319781	3300005457	Corn Rhizosphere	SRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0068867_1008639371	3300005459	Miscanthus Rhizosphere	SRLLVQAPSECTGSVSLLWFNPATRAEQWLIRSPAHVIGVTVAIPFYSRQNGNL*
Ga0070698_1011952812	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPAHVIGVTVAIPFYSRQNGNL*
Ga0070732_107457552	3300005542	Surface Soil	ARLLIQAPTSCTGSVSLLWFDPGTGAEQWLVRTPSTAHGVVVAVPFYSRENGNL*
Ga0070764_103699742	3300005712	Soil	GSRLLIQAPTSCTGSVSLLWFNPATHAEQWLIRAPAKVNGVAIAIPFYAREDGSL*
Ga0068861_1018361391	3300005719	Switchgrass Rhizosphere	HTSGDNRVLTARGSRLLVQAPSECTGSVSLLWFNPATRAEQWLIRPPAHVIGVTIAIPFYSRQNGNL*
Ga0066903_1014570882	3300005764	Tropical Forest Soil	GSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL*
Ga0066903_1022339572	3300005764	Tropical Forest Soil	VTHHPGGCRLLIQAPTDCTGSVSLLWYDPGKRTEQWLIRAPRNVLGVANAIPFYSRQNGNL*
Ga0070717_104338971	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ARGSRLLVEAPTDCTGSVSLLWYNPGTGAEQWLIRPKGNVLGVASAVPFYSRQNGDL*
Ga0070717_113394791	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGN
Ga0070715_100935021	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RGSRLLVQAPTDCTGSVSLLWYNPATQGEQWLIRPPAHVIGVTVAIPFYSRQNGNL*
Ga0070712_1018502041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PHTSGDNRVLTARGSRLLVQAPSECTGSVSLLWYNPATRAEQWLIRPPAHVIGVTVAIPFYNRQNGNL*
Ga0070712_1020308012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SGDNRVLTARGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0079222_126056351	3300006755	Agricultural Soil	TSGDNRVLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0075425_1003939333	3300006854	Populus Rhizosphere	QAPTDCTGSVSLLWYNPGTQAEQWLIRPPAHVIGVTVAVPFYSRQNGNL*
Ga0066709_1017430432	3300009137	Grasslands Soil	VPHTNGDNRVLTARGSGLLVQAPTDCTGSVSLLWYDPGTRAEQWLIRAPGNVLGVASAVPFYTRQNGNL*
Ga0105242_103947801	3300009176	Miscanthus Rhizosphere	NRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0105248_108902601	3300009177	Switchgrass Rhizosphere	SGDNRVLSARGFRLLVQAPTDCTGSVSLLWYNPATEAEQWLIRPPAHVIGVTVAIPFYSRQNGNL*
Ga0116214_10484443	3300009520	Peatlands Soil	VLTTLGSRLLIQAPTSCTGSVSLVWFNPATQAEQWLIRAPANVTGAAIAIPFYSRENGNL
Ga0116214_14363431	3300009520	Peatlands Soil	TMGDNRVLTALGSRLLIQAPTSCTGSVSLVWFDPATRAEQWLIRAPGNATGAAIAIPFYSRENGNL*
Ga0105249_127894781	3300009553	Switchgrass Rhizosphere	TAPHTSGDNRVLTARGSRLLVQAPSECTGSVSLLWYNPATRAEQWLIRPPAHVIGVTIAIPFYSRQNGNL*
Ga0134082_100694501	3300010303	Grasslands Soil	TARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRAPGNVIGVANAVPFYSRQNGDL*
Ga0074046_105056402	3300010339	Bog Forest Soil	MGDNRVLTALGSRLLIQAPTSCTGSVSLLWLDPATRAEQWLIRAPGNVTGAAIAIPFYSRENGNL*
Ga0126376_122882082	3300010359	Tropical Forest Soil	ASASRLLIQAPTSCVGSNSLLWYNPATHAEQWLIRAPSNVIGVENAVPFYSRQNGNM*
Ga0134128_112932872	3300010373	Terrestrial Soil	SRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL*
Ga0105239_103641581	3300010375	Corn Rhizosphere	NRVLTARGSRLLVQAPSECTGSVSLLWYNPATRAEQWLIRPPAHVIGVTIAIPFYSRQNGNL*
Ga0126381_1047244251	3300010376	Tropical Forest Soil	QGSRLLIQAPTSCLGSNSLLWFDPATRAEQWLIRAPANELGAAIAIPFYSRENGNL*
Ga0134124_128304982	3300010397	Terrestrial Soil	VRHTSGDNRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNG
Ga0134121_103969691	3300010401	Terrestrial Soil	LLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0134121_117098802	3300010401	Terrestrial Soil	GSRLLIQAPTSCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVENAVPFYSRQNGNM*
Ga0150983_117884621	3300011120	Forest Soil	GDNDVLTAFGARLLIQAPTSCIGSNSLLWFNPATHAEQWLIRAPANQIGVTVAIPFYSREDGNL*
Ga0137379_115371611	3300012209	Vadose Zone Soil	TARGSRLLIQAPTDCTGSNSLLWYDPGTHAEQWLIQPKGNVIGVANAIPFYSRQNGDL*
Ga0137378_102202943	3300012210	Vadose Zone Soil	TDCTGSVSLLWYDPGTRAEPWLIRAPGNVLGVANAVPFYTRQNGNL*
Ga0137386_104931411	3300012351	Vadose Zone Soil	GDNRVLTARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRPKGNVLGVADAVPFYSRQNGDL*
Ga0137371_106848371	3300012356	Vadose Zone Soil	ARGSRLLVEAPTECTGSVSLLWYDPGTRAEQWLIRPKGNVLGVANAVPFYSRQNGDL*
Ga0137384_101901993	3300012357	Vadose Zone Soil	RLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRPKGNVLGVANAVPFYSRQNGDL*
Ga0157354_10638321	3300012517	Unplanted Soil	RGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPARAIGVTVAIPFYSRQNGNL*
Ga0164302_105227943	3300012961	Soil	VLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHVIGVTIAIPFYSRQNGNL
Ga0126369_114498422	3300012971	Tropical Forest Soil	ARGPRLLIQAPTECTSGVSLLWYDPGKRAEQWLIRARGNVIGVENAVPFYSRENGNL*
Ga0164307_101018232	3300012987	Soil	VLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPGHVIGVTVAVPFYSRQNGNL
Ga0164306_102159024	3300012988	Soil	VLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYNRQNGNL
Ga0157373_109013732	3300013100	Corn Rhizosphere	TARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHATGVTVAIPFYSRQNGNL*
Ga0157376_126268811	3300014969	Miscanthus Rhizosphere	HTTDDNRVLTARGSRLLVQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL*
Ga0132256_1036745381	3300015372	Arabidopsis Rhizosphere	RLLVQAPSDCTGSVSLLWYNPGTQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL*
Ga0182037_113475262	3300016404	Soil	GSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVVGAAVAIPFYSRENANL
Ga0182038_119066851	3300016445	Soil	GSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0163161_101824293	3300017792	Switchgrass Rhizosphere	QAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0187812_10499822	3300017821	Freshwater Sediment	GSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPSNAIGVASAIPFYSRENGNL
Ga0187812_10742111	3300017821	Freshwater Sediment	RVLTALGSRLLIQAPTSCAGSVSLLWFNPATRAEQWLIRAPGNVAGASIAIPFYSRENGN
Ga0187807_10482282	3300017926	Freshwater Sediment	VLTALGSGLLLQAPTSCAGSVSLLWFNPATRAEQWLIRAPGNVAGATIAIPFYSRANGNL
Ga0187807_11218181	3300017926	Freshwater Sediment	NHVLTALGSRLLIQAPTSCTGSVSLLWFNPATRAEQWLVRAPANVAGASIAIPFYSREDGNL
Ga0187814_101089832	3300017932	Freshwater Sediment	VLTALGSRLLIQAPTSCAGSVSLLWFNPATRAEQWLIRAPGNVAGATIAIPFYSRANGNL
Ga0187808_104695021	3300017942	Freshwater Sediment	VLTALGSRLLIQAPTSCTGSVSLLWFNPATRAEQWLVRAPANVAGASIAIPFYSREDGNL
Ga0187819_106524341	3300017943	Freshwater Sediment	VPNRVLTALGSRLLIQAPTSCAGSVSLLWFNPATRAEQWLIQAPGNVVGASIAIPFYSRENGNL
Ga0187777_108851552	3300017974	Tropical Peatland	GSRLLIQAPTSCVGSVSLLWFNPGTRAEQWLIRAPADMTGAAIAIPFYSRENGSL
Ga0187765_101047631	3300018060	Tropical Peatland	VLTALGSRLLIQAPTSCAGRVSLLSFNPATRAGQWLIRAPGNVVGASIAIPFYSRENGNL
Ga0187765_111168092	3300018060	Tropical Peatland	PHTMGDNHVLTALGSRLLIQAPTSCIGSVSLLWFNPATRAEQWLIRAPANVTGAAIAIPFYSRENGNL
Ga0210407_102710604	3300020579	Soil	LTARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRAPGNVIGVANAVPFYSRQNGDL
Ga0210404_104420791	3300021088	Soil	RLLVQAPTDCTGSVSLLWYDPAKRAEQWLIRAPGNVIGVAIAVPFYSRQNGNL
Ga0210405_102889582	3300021171	Soil	EGDNDVLTALGARLLIRAPTSCIGSNSLLWFNPGTGAEQWLIRAPANQAGVTAALPFYSRQDGSL
Ga0210408_110643092	3300021178	Soil	VQAPTDCTGSVSLLWYDPGTRAEQWLIRPPANVIGVANAIPFYSRQNGDL
Ga0210408_112222812	3300021178	Soil	HTNGDNRVLTARGSRLLVQAPTDCTGSVSLLWYDPATRAEQWLIRPPANVIGVANAIPFYSRQNGDL
Ga0213875_101781191	3300021388	Plant Roots	SRLLVQAPTSCVGSNSLLWYNPGTHAEQWLVRAPSNVIGVENAVPFYNRLNGDM
Ga0210397_101476753	3300021403	Soil	SGDNRVLTARGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0210387_105430471	3300021405	Soil	TKGENDVLTALGARLLIRAPTSCIGSNSLLWFNPGTGAEQWLIRAPANQAGVTAALPFYSRQDGSL
Ga0210390_103947561	3300021474	Soil	QAPTSCTGSNSLLWYNPGTGAEQWLIRAPANEVGVAAAIPFYSRQDGSL
Ga0210402_107192881	3300021478	Soil	GDNQVLTAHGSRLLIQAPTECTGSVSLLWYDPGKRAEQWLIRAPGNVTGVASAVPFYSRENGNL
Ga0210402_117260721	3300021478	Soil	ARLLVQAPTDCTGSVSLLWYDPAKRAEQWLIRAPGNVIGVAIAVPFYSRQNGNL
Ga0242668_10463922	3300022529	Soil	PSGRQRTCWRSGAPTSCIGSNSLLWFNPATHAEQWLIRAPANQIGVTVAIPFYSREDGNL
Ga0242675_10399362	3300022718	Soil	VLTALGARLLIRAPTSCISSNSLLWFNPGTGAEQWLIGAPANQAGVTAAVPFYSRQDGNL
Ga0247668_10280261	3300024331	Soil	IPPHTTDDNRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0207692_103042251	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0207692_103386722	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL
Ga0207692_103544451	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ATGSRLLVQAPTSCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVENAVPFYSRQNGNM
Ga0207693_100107759	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL
Ga0207693_104103003	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVLGVANAIPFYSRQNGDL
Ga0207663_113548431	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GSRLLVEAPTDCTGSVSLLWYNPGTGAEQWLIRPKGNVLGVASAVPFYSRQNGDL
Ga0207660_105045602	3300025917	Corn Rhizosphere	TTDDDRVLTARGSRLLIQAPTDCTGSNSLLWYDPGTRAEQWLIRPKGNVIGVANAIPFYSRQNGNL
Ga0207649_109906622	3300025920	Corn Rhizosphere	LTATGSRLLVQAPTSCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVENAVPFYSRQNGNM
Ga0207646_104146743	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TNGDNRVLTARGSRLLVQAPTDCTGSVSLLWYDPGTRAEQWLIRAPGKVLGVANAVPFYSRQNGNL
Ga0207706_102454841	3300025933	Corn Rhizosphere	NRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0207703_111074861	3300026035	Switchgrass Rhizosphere	RGSRLLVQAPSECTGSVSLLWFNPATRAEQWLIRSPAHVIGVTVAIPFYSRQNGNL
Ga0207675_1003900823	3300026118	Switchgrass Rhizosphere	TARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0209265_10540112	3300026308	Soil	VLTARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRPQGHVLGVAFAVPFYSRQNGDL
Ga0209577_107267932	3300026552	Soil	ARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRAPGNVIGVANAVPFYSRQNGDL
Ga0208731_10015122	3300027029	Forest Soil	HTNGDNDVLTALGARLLIQAPTSCIGSNSLLWFNPATHAEQWLIRAPANQIGVTVAIPFYSREDGNL
Ga0208240_10011971	3300027030	Forest Soil	ALGARLLIQAPTSCIGSNSLLWFNPATHAEQWLIRAPANQIGVTVAIPFYSREDGNL
Ga0209111_10145001	3300027058	Forest Soil	VLTARGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL
Ga0209693_105697032	3300027855	Soil	TLGDNHVLTALGSRLLIQAPTSCEGSNSLLWFNPGTRAEQWLIRAPANVTGVAVAIPFYSKENGNL
Ga0209275_102794292	3300027884	Soil	GDNRVLTARGSRLLVEAPTDCTGSVSLLWYDPGTRAEQWLIRAPANVTGVAVAIPFYSKENGNL
Ga0209415_100911741	3300027905	Peatlands Soil	NRVLTALGSRLLIQAPTSCTGSVSLVWFDPATRAEQWLIRAPGNATGAAIAIPFYSRENGNL
Ga0311338_118529111	3300030007	Palsa	NRVLTAAGSRLLIQAPTSCTGSVSLLWFNPGTRAEQWLVRTPANMSGVAIAIPFYSRENGNL
Ga0311370_119647891	3300030503	Palsa	GSRLLIQAPTSCTGSVSLLWFNPGTRAEQWLVRTPANMSGVAIAIPFYSRENGNL
Ga0170834_1097278302	3300031057	Forest Soil	VPHTLGDNHVLTALGSRLLVQAPTSCTGSNSLLWFDPGTRSEQYLIKSPGNVIGVSMAIPFYSRQNASF
Ga0302324_1027419941	3300031236	Palsa	GSRLLIQAPTSCTGSVSLLWFNPGTRAEQWLVRTPANVSGVAIAIPFYSRENGNL
Ga0302326_104239981	3300031525	Palsa	AAGSRLLIQAPTSCTGSVSLLWFNPGTRAEQWLVRTPANMSGVAIAIPFYSRENGNL
Ga0318516_108510411	3300031543	Soil	SGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0318541_105920992	3300031545	Soil	VLTAFGSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0318571_103580191	3300031549	Soil	DNRVLTAFGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0310915_105220201	3300031573	Soil	GSRLLIQAPTDCTGSVSLLWYDPGTRAEQWLIRPPAHTIGVSIAIPFYSRENGNL
Ga0318561_100808562	3300031679	Soil	RVLTAFGSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGN
Ga0318572_100350673	3300031681	Soil	SRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0318572_100709551	3300031681	Soil	GSRLLIQAPTDCTGSVSLLWYDPGTRAEQWLIRPPAHTIGVTIAIPFYSRENGNL
Ga0318560_100221433	3300031682	Soil	LTALGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0310686_1012814452	3300031708	Soil	ARLLIQAPTSCIGSNSLLWFNPGTGAEQWLIRAPANQIGVTVAIPFYSRQDGHI
Ga0310813_120052861	3300031716	Soil	TSGDNRVLTARGSRLLVQAPTDCTGSVSLLWYNPATQAEQWLIRPPAHVIGVTVALPFYSRQNGNL
Ga0307474_105120412	3300031718	Hardwood Forest Soil	VLTARGSRLLVQAPTDCIGSVSLLWYNPATQAEQWLIRPPARAIGVTVAIPFYSRQNGNL
Ga0306917_110703792	3300031719	Soil	GSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0306918_108873181	3300031744	Soil	APTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0318494_108442892	3300031751	Soil	AFGSRLLIQAPTSCTGSDSLLWFNPATRAEHWLIRAPRNVIGVAAAIPFYSRQNGNL
Ga0318554_105421972	3300031765	Soil	LGDNHVLTALGSRLLIQAPTSCTGSVSLLWFDPATHAEQWLIRAPQNVIGAAMAIPFYSRENGNL
Ga0318509_101098551	3300031768	Soil	PHTASDNRVLTAFGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPRNVIGVAAAIPFYSRQNGNL
Ga0318546_103640061	3300031771	Soil	LTARGSRLLIQAPTDCTGSVSLLWYDPGTRAEQWLIRPPAHTIGVTIAIPFYSRENGNL
Ga0318546_113223492	3300031771	Soil	APTSCVGSNSLLWYNPGTHAEQWLIRAPAKVVGVENAVPFYSRQNGNM
Ga0318557_102097201	3300031795	Soil	DNRVLTALGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0318567_100873382	3300031821	Soil	DNRVLTALGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVVGAAVAIPFYSRENANL
Ga0318520_100178783	3300031897	Soil	TASDNRVLTAFGSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0306923_103509532	3300031910	Soil	NRVLTAFGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVVGAAVAIPFYSRENANL
Ga0310909_100943233	3300031947	Soil	VLTALGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0306922_118889931	3300032001	Soil	LVQAPTDCTGSVSLLWYDPGKRAEQWLIRAPRNALGVTIAVPFYSRQNGNL
Ga0318563_103803021	3300032009	Soil	LTAFGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVAGAAVAIPFYSRENANL
Ga0318556_107399581	3300032043	Soil	HTASDNRVLTAFGSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0318504_105707001	3300032063	Soil	HTASDNRVLTALGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVVGAAVAIPFYSRENANL
Ga0318514_106391381	3300032066	Soil	SDNRVLTASGSRLLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPRNVIGVAAAIPFYSRQNGNL
Ga0318553_107727941	3300032068	Soil	LLIQAPTSCTGSDSLLWFNPATHAEQWLIRAPDNVIGAANAIPFYSRENGNL
Ga0306920_1014164061	3300032261	Soil	SDNRVLTAFGSRLLIQAPTSCTGSNSLLWFNPATHAEQWLIRAPHNVIGVAAAIPFYSRQNGNL
Ga0306920_1031758231	3300032261	Soil	PHTASINRVLTAFGSRLLIQAPTSCTGADSLLWFNPVTHAEQWLIRAPGNVIGAASAIPFYSRQDGNL
Ga0335079_100369654	3300032783	Soil	VPHTNGDNQVLTARGSRLLIQAPTECTGSVSLLWYDPGKRAEQWLIRAPRNALGVANAIPFYSRQNGNL
Ga0335070_119915232	3300032829	Soil	APTDCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVESAVPFYSRQNGNM
Ga0335069_108606141	3300032893	Soil	DNVVLTASASRLLIQAPTDCVGSNSLLWYNPGTHAEQWLIRAPSKVIGVESAVPFYSRQNGNM
Ga0335083_115091741	3300032954	Soil	ARGSRLLIQAPTECTGSVSLLWYDPGKRAEQWLIRAPGNVTGVASAVPFYSRENGNL
Ga0335073_113880881	3300033134	Soil	MRLRRTALIAIATAVLVQAPTDCVGSVSLLWYNPATQAEQWLIRPPAHAIGVTVAVPFYSRQNGNL
Ga0335073_118405631	3300033134	Soil	QAPTDCTGSVSLLWYDPGKRSEQWLIRAPRNALGVANAVPFYSRQNGNL
Ga0373958_0116824_1_204	3300034819	Rhizosphere Soil	DTSGDNRVLTARGSRLLVQAPTDCIGGVSLLWYNPATQAEQWLIRPPAHAIGVTVAIPFYSRQNGNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049975

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences