Metagenome / Metatranscriptome Family F050018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	56 residues
Representative Sequence	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Number of Associated Samples	109
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.01 %
% of genes near scaffold ends (potentially truncated)	41.10 %
% of genes from short scaffolds (< 2000 bps)	75.34 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.767 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.671 % of family members)
Environment Ontology (ENVO)	Unclassified (46.575 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.781 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.42% β-sheet: 0.00% Coil/Unstructured: 31.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF13417	GST_N_3	33.56
PF02698	DUF218	22.60
PF13409	GST_N_2	10.27
PF10633	NPCBM_assoc	3.42
PF03737	RraA-like	2.74
PF12679	ABC2_membrane_2	2.05
PF00248	Aldo_ket_red	1.37
PF00005	ABC_tran	1.37
PF04392	ABC_sub_bind	0.68
PF06508	QueC	0.68
PF00346	Complex1_49kDa	0.68
PF07370	DUF1489	0.68
PF13365	Trypsin_2	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	22.60
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	22.60
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	2.74
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.68
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.68
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.68
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.68
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.68
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.68
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.68
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.68
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.68
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.68
COG5458	Uncharacterized conserved protein, DUF1489 domain	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.77 %
Unclassified	root	N/A	21.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.77 %
Unclassified	root	N/A	21.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.77 %
Unclassified	root	N/A	21.23 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.64 %
Unclassified	root	N/A	21.23 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.00 %
Unclassified	root	N/A	21.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.74 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25.34 %
Unclassified	root	N/A	21.23 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	4.11 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.23 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	13.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.11 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.23 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	13.70 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	4.11 %
Methylogaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea	2.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.23 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	4.11 %
Methylogaea oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	2.74 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.23 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	2.74 %
Methylogaea oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	2.74 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1.37 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10349348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1546	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1068063	Not Available	542	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1069539	Not Available	621	Open in IMG/M
3300001431\|F14TB_100400030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2335	Open in IMG/M
3300002906\|JGI25614J43888_10011411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2869	Open in IMG/M
3300002911\|JGI25390J43892_10013907	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300004633\|Ga0066395_10079065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1535	Open in IMG/M
3300005177\|Ga0066690_10621008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300005178\|Ga0066688_10386841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	907	Open in IMG/M
3300005186\|Ga0066676_10146062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300005332\|Ga0066388_100110217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	3245	Open in IMG/M
3300005332\|Ga0066388_100332838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	2164	Open in IMG/M
3300005332\|Ga0066388_100753276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300005332\|Ga0066388_101636360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300005332\|Ga0066388_102782637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300005363\|Ga0008090_10142405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1241	Open in IMG/M
3300005363\|Ga0008090_10162886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1548	Open in IMG/M
3300005363\|Ga0008090_10194527	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300005363\|Ga0008090_10199192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2433	Open in IMG/M
3300005446\|Ga0066686_10553672	Not Available	781	Open in IMG/M
3300005468\|Ga0070707_100610627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300005468\|Ga0070707_100884376	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005518\|Ga0070699_100001491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21462	Open in IMG/M
3300005713\|Ga0066905_100002328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	7053	Open in IMG/M
3300005713\|Ga0066905_100172235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300005713\|Ga0066905_100342479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300005764\|Ga0066903_103326429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	868	Open in IMG/M
3300005937\|Ga0081455_10000664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44581	Open in IMG/M
3300006800\|Ga0066660_10377143	Not Available	1162	Open in IMG/M
3300006845\|Ga0075421_100048143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5400	Open in IMG/M
3300006845\|Ga0075421_101894318	Not Available	638	Open in IMG/M
3300007258\|Ga0099793_10360900	Not Available	711	Open in IMG/M
3300009147\|Ga0114129_10173044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	2942	Open in IMG/M
3300010041\|Ga0126312_10269564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1198	Open in IMG/M
3300010046\|Ga0126384_10195061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1598	Open in IMG/M
3300010048\|Ga0126373_10628424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300010358\|Ga0126370_10496078	Not Available	1030	Open in IMG/M
3300010358\|Ga0126370_12438418	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010360\|Ga0126372_10943617	Not Available	869	Open in IMG/M
3300010362\|Ga0126377_10809736	Not Available	995	Open in IMG/M
3300010362\|Ga0126377_11326747	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300010366\|Ga0126379_10869306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300010366\|Ga0126379_13357353	Not Available	536	Open in IMG/M
3300010398\|Ga0126383_10599677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300010398\|Ga0126383_13409563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300012199\|Ga0137383_10103432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2069	Open in IMG/M
3300012200\|Ga0137382_10142516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1619	Open in IMG/M
3300012201\|Ga0137365_10064889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2756	Open in IMG/M
3300012201\|Ga0137365_10079797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2467	Open in IMG/M
3300012204\|Ga0137374_10758790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300012207\|Ga0137381_10577315	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012210\|Ga0137378_11689555	Not Available	540	Open in IMG/M
3300012349\|Ga0137387_10902602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300012353\|Ga0137367_11117243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300012355\|Ga0137369_10200874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1541	Open in IMG/M
3300012356\|Ga0137371_10004955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10429	Open in IMG/M
3300012357\|Ga0137384_10076066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2790	Open in IMG/M
3300012358\|Ga0137368_10132957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1863	Open in IMG/M
3300012359\|Ga0137385_10024018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5459	Open in IMG/M
3300012360\|Ga0137375_10180724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2023	Open in IMG/M
3300012929\|Ga0137404_11701149	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012971\|Ga0126369_10391001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1426	Open in IMG/M
3300015053\|Ga0137405_1319447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4127	Open in IMG/M
3300016270\|Ga0182036_10164456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1594	Open in IMG/M
3300016270\|Ga0182036_11696678	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300016294\|Ga0182041_10925128	Not Available	785	Open in IMG/M
3300016357\|Ga0182032_10902930	Not Available	751	Open in IMG/M
3300016371\|Ga0182034_10196996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1554	Open in IMG/M
3300016371\|Ga0182034_11396248	Not Available	612	Open in IMG/M
3300016387\|Ga0182040_11855075	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300016445\|Ga0182038_12009648	Not Available	523	Open in IMG/M
3300018468\|Ga0066662_10375473	Not Available	1237	Open in IMG/M
3300018482\|Ga0066669_11788026	Not Available	567	Open in IMG/M
3300021086\|Ga0179596_10506503	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021168\|Ga0210406_10675094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300024347\|Ga0179591_1024887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3926	Open in IMG/M
3300025922\|Ga0207646_10590900	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300026310\|Ga0209239_1002054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12032	Open in IMG/M
3300026552\|Ga0209577_10675488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300027646\|Ga0209466_1002697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3650	Open in IMG/M
3300027654\|Ga0209799_1109699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300027873\|Ga0209814_10097318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	1248	Open in IMG/M
3300027874\|Ga0209465_10037701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2292	Open in IMG/M
3300027909\|Ga0209382_11617119	Not Available	640	Open in IMG/M
3300028878\|Ga0307278_10031979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2405	Open in IMG/M
3300031543\|Ga0318516_10005579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5739	Open in IMG/M
3300031543\|Ga0318516_10014904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3853	Open in IMG/M
3300031543\|Ga0318516_10016512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3689	Open in IMG/M
3300031543\|Ga0318516_10035228	Not Available	2662	Open in IMG/M
3300031543\|Ga0318516_10120872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1493	Open in IMG/M
3300031543\|Ga0318516_10802596	Not Available	532	Open in IMG/M
3300031544\|Ga0318534_10266409	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031545\|Ga0318541_10006733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4936	Open in IMG/M
3300031545\|Ga0318541_10371812	Not Available	798	Open in IMG/M
3300031561\|Ga0318528_10129227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1338	Open in IMG/M
3300031561\|Ga0318528_10525233	Not Available	635	Open in IMG/M
3300031668\|Ga0318542_10060406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1748	Open in IMG/M
3300031668\|Ga0318542_10309442	Not Available	809	Open in IMG/M
3300031679\|Ga0318561_10044814	All Organisms → cellular organisms → Bacteria → Proteobacteria	2193	Open in IMG/M
3300031680\|Ga0318574_10789418	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031744\|Ga0306918_10412133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300031747\|Ga0318502_10035124	All Organisms → cellular organisms → Bacteria → Proteobacteria	2563	Open in IMG/M
3300031763\|Ga0318537_10119301	Not Available	979	Open in IMG/M
3300031763\|Ga0318537_10143241	Not Available	889	Open in IMG/M
3300031764\|Ga0318535_10539819	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031765\|Ga0318554_10121275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1475	Open in IMG/M
3300031771\|Ga0318546_10143572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1603	Open in IMG/M
3300031771\|Ga0318546_10207597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1339	Open in IMG/M
3300031771\|Ga0318546_10326254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300031777\|Ga0318543_10237122	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031777\|Ga0318543_10365319	Not Available	646	Open in IMG/M
3300031778\|Ga0318498_10068654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1590	Open in IMG/M
3300031778\|Ga0318498_10273581	Not Available	759	Open in IMG/M
3300031779\|Ga0318566_10347967	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031780\|Ga0318508_1191329	Not Available	585	Open in IMG/M
3300031781\|Ga0318547_10339367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	916	Open in IMG/M
3300031792\|Ga0318529_10021044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2602	Open in IMG/M
3300031792\|Ga0318529_10339384	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031793\|Ga0318548_10637881	Not Available	517	Open in IMG/M
3300031798\|Ga0318523_10007935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	4182	Open in IMG/M
3300031798\|Ga0318523_10325314	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031832\|Ga0318499_10037533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1773	Open in IMG/M
3300031832\|Ga0318499_10056571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1473	Open in IMG/M
3300031833\|Ga0310917_10358007	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300031846\|Ga0318512_10054735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1789	Open in IMG/M
3300031879\|Ga0306919_10839054	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031894\|Ga0318522_10287624	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031910\|Ga0306923_11740234	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031912\|Ga0306921_12467208	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031947\|Ga0310909_10015848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5310	Open in IMG/M
3300031954\|Ga0306926_10057036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4687	Open in IMG/M
3300031959\|Ga0318530_10023819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2129	Open in IMG/M
3300032009\|Ga0318563_10060594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1953	Open in IMG/M
3300032009\|Ga0318563_10294476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	877	Open in IMG/M
3300032009\|Ga0318563_10378883	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032009\|Ga0318563_10463201	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300032010\|Ga0318569_10431693	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032051\|Ga0318532_10282259	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032063\|Ga0318504_10005706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3969	Open in IMG/M
3300032065\|Ga0318513_10055986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1776	Open in IMG/M
3300032068\|Ga0318553_10073528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1715	Open in IMG/M
3300032089\|Ga0318525_10250287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylogaea → Methylogaea oryzae	910	Open in IMG/M
3300032205\|Ga0307472_100311365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1271	Open in IMG/M
3300032261\|Ga0306920_103722684	Not Available	559	Open in IMG/M
3300033289\|Ga0310914_10479685	Not Available	1125	Open in IMG/M
3300033290\|Ga0318519_10975639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.89%
Host-Associated	Host-Associated	4.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.89%
Plants	Host-Associated → Plants	4.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_103493482	3300000550	Soil	MRVEMRPAIPSALPHVPGARRERLLRWAAAAVTVLAATVAVLGAAMTAVMLGIT*
AF_2010_repII_A01DRAFT_10680632	3300000580	Forest Soil	ETRPAIPSTLPEVMVPRARRDRLLRWFAAALTVLAATVAVVGAAMTAVMLGIT*
AF_2010_repII_A100DRAFT_10695391	3300000655	Forest Soil	VEMRPAIPSTLPEVIVPRTRRNRLLRWFAAAVTVLAATVAVLGAAMTAVMLGIT*
F14TB_1004000302	3300001431	Soil	MRVEMRPAIPSALPHVPGARRERLLRWAAAAVTVLAATVAVLGAAMTAVMLGIS*
JGI25614J43888_100114112	3300002906	Grasslands Soil	MPIEMRPAIPAALPHAAVARGRRERLLGWLRAAVTVLAATVAVLGAAMTAVILGIT*
JGI25390J43892_100139071	3300002911	Grasslands Soil	MRVEMRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVVLGIT*
Ga0066395_100790652	3300004633	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT*
Ga0066690_106210082	3300005177	Soil	MPLEMRPAIPAALPHAAVARGRGERLLRCFVAAVTVLAATIAVLGAAMTAVILGIS*
Ga0066688_103868412	3300005178	Soil	MPLEMRPAIPAVARGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS*
Ga0066676_101460622	3300005186	Soil	MPLEMRPAIPAALPHAAVARGRGERLLRCFAAAVTVLAATIAVLGAPMTAVILGIS*
Ga0066388_1001102173	3300005332	Tropical Forest Soil	MPLEMRPAIPAPVPHGAVAHGRRERLLRWFAAAVTALAATVAVLGAAMTAVILGIT*
Ga0066388_1003328382	3300005332	Tropical Forest Soil	MRAEMRPAIPSTLPEVMVPRARRDRLLRWFAAALTVLAATVAVVGAAMTAVMLGIT*
Ga0066388_1007532763	3300005332	Tropical Forest Soil	MRVEMRPAMPSSLPRAAVSQARRERLLRRSALAVTVLTATIAVLAAAVAAVMLGMT*
Ga0066388_1016363602	3300005332	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLAATIAVLAAA
Ga0066388_1027826372	3300005332	Tropical Forest Soil	MMRVEIRPAMPSVMPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVLLGIT*
Ga0008090_101424052	3300005363	Tropical Rainforest Soil	MRVEMRPAMPSALPRAAISQARRERLLRWSALAVTVLTATIAVLAAAMAAVLLGMT*
Ga0008090_101628862	3300005363	Tropical Rainforest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0008090_101945271	3300005363	Tropical Rainforest Soil	MRAETRPAIPSTLPEVMVPRARRDRLLRWFAAALTVLAATVAVVGAAMTAVMLGIT*
Ga0008090_101991923	3300005363	Tropical Rainforest Soil	VRVEMRPAIPSTLPEVIVPRTRRNRLLRWFAAAVTVLAATVAVLGAAMTAVMLGIT*
Ga0066686_105536722	3300005446	Soil	MRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVVLGIT*
Ga0070707_1006106271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPIEMRPAIPAALPHAAVARGRRERLLGWLRAAVTVLAATVAVLSAAMTAVILGIT*
Ga0070707_1008843762	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0070699_1000014918	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0066905_1000023289	3300005713	Tropical Forest Soil	MPATPPHAAVAPGRLLRWLAAAVTVLAATVAVLGAAMTAVILGIT*
Ga0066905_1001722351	3300005713	Tropical Forest Soil	PMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT*
Ga0066905_1003424792	3300005713	Tropical Forest Soil	GKEHHPMMRVEMRPAMPSALPRAAVAQARRERLLRWSALVVTVLTATIAVLAVAMTAVMLGIT*
Ga0066903_1033264292	3300005764	Tropical Forest Soil	MMRVEMRPAMPSVLPRAAVAQGRRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0081455_1000066420	3300005937	Tabebuia Heterophylla Rhizosphere	MMRVEMRPAIPSALPQVLRARRERLLRWVASAVTVFAATVAVLGAAMAAVMLGLT*
Ga0066660_103771432	3300006800	Soil	MPLEMRPAIPAALPHAGVAHGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS*
Ga0075421_1000481432	3300006845	Populus Rhizosphere	MRVEMRPAIPSALPHVAVSRARRERLLRRLAAAVTMLAATVAVLGAAMTAVMLGIT*
Ga0075421_1018943181	3300006845	Populus Rhizosphere	MMRVEMRPAIPSALPHVPRARRERLLRWVAAAVTMLAATVAVLGAAMTAVMLGIT*
Ga0099793_103609002	3300007258	Vadose Zone Soil	VLISGQGVLTMPIEMRPAIPAALPHAAVARGRRERLLGWLRAAVTVLAATVAVLGAAMTAVILGIT*
Ga0114129_101730441	3300009147	Populus Rhizosphere	MMRVEMRPAIPSALPHVPRARRERLLRWVAAAVTMFAATVAVLGAAMTAVMLGIT*
Ga0126312_102695641	3300010041	Serpentine Soil	MRVEMRPAIPSALPHVAVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVMLGIT*
Ga0126384_101950611	3300010046	Tropical Forest Soil	GHICARAPSKEHHPMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT*
Ga0126373_106284242	3300010048	Tropical Forest Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT*
Ga0126370_104960782	3300010358	Tropical Forest Soil	MSAHERLGWEGAPVMRVEMRPAMPSSLPRAAVSQARRERLLRRSALAVTVLTATIAVLAAAVAAVMLGMT*
Ga0126370_124384181	3300010358	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMT
Ga0126372_109436171	3300010360	Tropical Forest Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT*
Ga0126377_108097362	3300010362	Tropical Forest Soil	MMRAEIRPAMPAALPDVAASQARRDRLLRWLAAAVTVFTATIAVLAAAMTAVMLGLT*
Ga0126377_113267472	3300010362	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALVVTVLTATIAVLAVAMTAVMLGIT*
Ga0126379_108693061	3300010366	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVVAA
Ga0126379_133573531	3300010366	Tropical Forest Soil	MMRVEMRPAMPSAFPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT*
Ga0126383_105996772	3300010398	Tropical Forest Soil	MSAHERLGWEGAPVMRVEMRPAMPSSLPRAAVSQARRERLLRRSALAVTVLTATIAVLAAAMAAVMLGST*
Ga0126383_134095631	3300010398	Tropical Forest Soil	KEHHPMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT*
Ga0137383_101034323	3300012199	Vadose Zone Soil	MMRVEIRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0137382_101425161	3300012200	Vadose Zone Soil	MRVEMRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAGVLGIT*
Ga0137365_100648894	3300012201	Vadose Zone Soil	MRVEIRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVVLGIT*
Ga0137365_100797973	3300012201	Vadose Zone Soil	MPLEMRPAIPAVARGRGERLLRCFAAAVTVLAATIAVLGAAMTAVMLGIS*
Ga0137374_107587901	3300012204	Vadose Zone Soil	RPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVMLGIT*
Ga0137381_105773151	3300012207	Vadose Zone Soil	MMRVEIRPAMPSALPRAAVSQARRERLLRWFALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0137378_116895552	3300012210	Vadose Zone Soil	MEIPAALPHAAVARGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS*
Ga0137387_109026022	3300012349	Vadose Zone Soil	CARAPSKEHHPMMRVEIRPAMPSALPRAAVSQARRERLLRWFALAVTVLTATIAVLAAAMTAVMLGIS*
Ga0137367_111172432	3300012353	Vadose Zone Soil	MRVEMRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVMLGIT*
Ga0137369_102008741	3300012355	Vadose Zone Soil	MRVEMRPAIPSALPHVPRARRERLLRWVAGAVTVLAATVAVLGAAMTAVMLGIT*
Ga0137371_1000495513	3300012356	Vadose Zone Soil	ARTVLRPSAWEGASTMRVEMRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVVLGIT*
Ga0137384_100760662	3300012357	Vadose Zone Soil	MMRVEIRPAMPSALPRAAVSQARRERLLRWSALAVAVLTATIAVLAAAMTAVMLGIT*
Ga0137368_101329572	3300012358	Vadose Zone Soil	MPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT*
Ga0137385_100240181	3300012359	Vadose Zone Soil	AVARGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS*
Ga0137375_101807242	3300012360	Vadose Zone Soil	MRVEMRPAIPSALPHVPGARRERLLRWVAAAVTVLAATVAVLGAAMTAVMLGIS*
Ga0137404_117011492	3300012929	Vadose Zone Soil	MRVEMRPAIPSALPHVSRARRERLLRRFAAAVTVLAATVAVLGAAMTAVVLGIT*
Ga0126369_103910013	3300012971	Tropical Forest Soil	VEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVAAAAMTAVMLGIT*
Ga0137405_13194474	3300015053	Vadose Zone Soil	MPSALPRAAGRASRRERLLRWSALAVTVLAATIAVLAAAMTAVMLGIT*
Ga0182036_101644563	3300016270	Soil	SALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0182036_116966781	3300016270	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAV
Ga0182041_109251282	3300016294	Soil	MRAEMRPAIPSTLPEVMVPRARRDRLLRWFAAALTVLAATVAVVGAAVTAVMLGIT
Ga0182032_109029302	3300016357	Soil	RPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAEAMTAVMLGIT
Ga0182034_101969961	3300016371	Soil	PSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAEAMTAVMLGIT
Ga0182034_113962482	3300016371	Soil	SALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMMGIT
Ga0182040_118550752	3300016387	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAM
Ga0182038_120096481	3300016445	Soil	VSAHERLGRSMILMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTAMIAVLAAAMAAVLLGMT
Ga0066662_103754732	3300018468	Grasslands Soil	MMRVEIRPAMPSALPRAAVSQARRQRLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0066669_117880261	3300018482	Grasslands Soil	MPLEMRPAIPADLPHAAVARGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS
Ga0179596_105065031	3300021086	Vadose Zone Soil	MPIEMRPAIPAALPHAAVARGRRERLLGWLRAAVTVLAATVAVLGAAMTAVILGIT
Ga0210406_106750942	3300021168	Soil	MPIEMRPAIPAALPHAAVARGPRERLLGWLRAAVTVLAATVAVLGAAMTAVILGIT
Ga0179591_10248872	3300024347	Vadose Zone Soil	MPIVMRPAIPAALPHAAVARGRRERLLGWLRAAVTVLAATVAVLGAAMTAVILGIT
Ga0207646_105909001	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0209239_100205411	3300026310	Grasslands Soil	MRVEMRPAIPSALPHVSRARRERLLRRLAAAVTVLAATVAVLGAAMTAVVLGIT
Ga0209577_106754881	3300026552	Soil	MPLEMRPAIPAALPHAGVAHGRGERLLRCFAAAVTVLAATIAVLGAAMTAVILGIS
Ga0209466_10026974	3300027646	Tropical Forest Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0209799_11096992	3300027654	Tropical Forest Soil	MMHVEMRPAMPSALPRAAVAQARRERLLRWCALAVTVVTATIAVLAAAMTAVMLGIS
Ga0209814_100973182	3300027873	Populus Rhizosphere	MRVEMRPAIPSALPHVAVSRARRERLLRRLAAAVTMLAATVAVLGAAMTAVMLGIT
Ga0209465_100377012	3300027874	Tropical Forest Soil	MMRVEMRPAMPSAFPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0209382_116171192	3300027909	Populus Rhizosphere	MMRVEMRPAIPSALPHVPRARRDRLLRWVAAAVTMLAATVAVLGAAMTAVMLGIT
Ga0307278_100319793	3300028878	Soil	MMRVETRPAMPSALPSMGVARARRDLLLRWFAAAVTVLTATIAVLAAAMTAVMLGIT
Ga0318516_100055792	3300031543	Soil	MMREMRPAMPSALPRPAVSQARRERLLRRSALAVTVLTATVAVLAVAVAAVMLGMT
Ga0318516_100149045	3300031543	Soil	MMRVEMRPAMPSASPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0318516_100165122	3300031543	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMMGIT
Ga0318516_100352283	3300031543	Soil	MMRAEIRPAMPAALPDVAASQARRDRLLRWLAAAVTVFTATIAVLAAAMTTVMLGLT
Ga0318516_101208722	3300031543	Soil	MRVEMRPAMPSALPRTAVSQARRERLLRRSALAVTVLTATVAVLAAAMAAVMLGMT
Ga0318516_108025961	3300031543	Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318534_102664091	3300031544	Soil	MCAHERLGRSIILMRVEMRPAMPSALPRTAVSQARRERLLRRSALAVTVLTATVAVLAAAMAAVMLGMT
Ga0318541_100067331	3300031545	Soil	MMRVEMRPAMPSASPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGI
Ga0318541_103718121	3300031545	Soil	AMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318528_101292272	3300031561	Soil	MMRVEMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0318528_105252331	3300031561	Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT
Ga0318542_100604061	3300031668	Soil	HHPMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318542_103094422	3300031668	Soil	ADMSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT
Ga0318561_100448142	3300031679	Soil	LRKRCWHSGRTSMMRAEIRPAMPAALPDVAASQARRDRLLRWLAAAVTVFTATIAVLAAAMTTVMLGLT
Ga0318574_107894182	3300031680	Soil	VSAHERLGRSMILMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMAAVLLGMT
Ga0306918_104121331	3300031744	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAARTA
Ga0318502_100351244	3300031747	Soil	RPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318537_101193012	3300031763	Soil	MMREMRPAMPSALPRPAVSQARRERLLRRSALAVTVLTATARTATVAVAAVMLGMT
Ga0318537_101432411	3300031763	Soil	EMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAEAMTAVMLGIT
Ga0318535_105398192	3300031764	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAA
Ga0318554_101212752	3300031765	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318546_101435721	3300031771	Soil	KEHHPMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318546_102075973	3300031771	Soil	PAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT
Ga0318546_103262541	3300031771	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318543_102371221	3300031777	Soil	MRVEMRPAMPSALPRTAVSQARRERLLRRSALAVTVLTATVAVLAAAMAAVML
Ga0318543_103653192	3300031777	Soil	ILMRVEMRPAMPSALPRTAVSQARRERLLRRSALAVTVLTATVAVLAAAMAAVMLGMT
Ga0318498_100686543	3300031778	Soil	RMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318498_102735811	3300031778	Soil	TLIRFDWGADTSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318566_103479672	3300031779	Soil	MMRVEMRPAMPSASPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLG
Ga0318508_11913291	3300031780	Soil	MCAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318547_103393671	3300031781	Soil	PAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMMGIT
Ga0318529_100210442	3300031792	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAEAMTAVMLGIT
Ga0318529_103393841	3300031792	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT
Ga0318548_106378811	3300031793	Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRRSAFAVTVLTATIAVLAAAMAAVLLGMT
Ga0318523_100079355	3300031798	Soil	MPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318523_103253142	3300031798	Soil	MRAEMRPAIPSTLPEVMVPRARRDRLLRWFAAALTVLAATVAVVG
Ga0318499_100375331	3300031832	Soil	SRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318499_100565712	3300031832	Soil	MSAHERLGRSIILMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATNAVLAAAMAAVLLGMT
Ga0310917_103580071	3300031833	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALTVTVLTATIAVVAAA
Ga0318512_100547351	3300031846	Soil	MRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0306919_108390541	3300031879	Soil	MPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGMT
Ga0318522_102876242	3300031894	Soil	MMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMT
Ga0306923_117402341	3300031910	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAM
Ga0306921_124672082	3300031912	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMAAVLLGM
Ga0310909_100158487	3300031947	Soil	AMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0306926_100570361	3300031954	Soil	MMRVEMRPAMPSASPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAV
Ga0318530_100238193	3300031959	Soil	PMMREMRPAMPSALPRPAVSQARRERLLRRSALAVTVLTATVAVLAVAVAAVMLGMT
Ga0318563_100605941	3300032009	Soil	EMRPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0318563_102944762	3300032009	Soil	HRMMRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318563_103788832	3300032009	Soil	VSAHERLGRSMILMRVEMRPAMPSALPRTAVSQARRERLLRRSALAVTVLTATVAVLAAAMAAVMLGMT
Ga0318563_104632012	3300032009	Soil	MMREMRPAMPSALPRPAVSQARRERLLRRSALAVTVLTATVAVLAVAVAAVMLG
Ga0318569_104316931	3300032010	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAM
Ga0318532_102822592	3300032051	Soil	MRVEMRPAMPSALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMAAVLLGLT
Ga0318504_100057062	3300032063	Soil	MMREMRPARPSALPRPAVSQARRERLLRRSALAVTVLTATVAVLAVAVAAVMLGMT
Ga0318513_100559863	3300032065	Soil	PAMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318553_100735283	3300032068	Soil	AMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVVAAAMTAVMLGIT
Ga0318525_102502872	3300032089	Soil	PSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT
Ga0307472_1003113652	3300032205	Hardwood Forest Soil	MPVEMRPAMPAAPPHAAIAPRRLLRWLAAGVTVLAATVAVLGAAMTAVILGIT
Ga0306920_1037226841	3300032261	Soil	MSAQERLGRSMILMRVEMRPSMPSALPRAAVSQARRERLLRWSALAVTVLTATIAVLAAAMAAVLLGMT
Ga0310914_104796852	3300033289	Soil	PALPPALPRAAVSQARRERLLRWCALAVTVLTATIAVLAAAMVAVLLGMT
Ga0318519_109756392	3300033290	Soil	RPAMPSALPRAAVAQARRERLLRWSALAVTVLTATIAVLAAAMTAVMLGIT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences