NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F050051

Metagenome Family F050051

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F050051
Family Type Metagenome
Number of Sequences 145
Average Sequence Length 37 residues
Representative Sequence ALGSDGALKDTRFILVRAECPYVQFVAARVISTENGS
Number of Associated Samples 63
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.70 %
% of genes near scaffold ends (potentially truncated) 98.62 %
% of genes from short scaffolds (< 2000 bps) 98.62 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.931 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(96.552 % of family members)
Environment Ontology (ENVO) Unclassified
(96.552 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(96.552 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.54%    β-sheet: 0.00%    Coil/Unstructured: 58.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.93 %
All OrganismsrootAll Organisms2.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005718|Ga0068866_11414409Not Available509Open in IMG/M
3300013296|Ga0157374_12007427Not Available605Open in IMG/M
3300013297|Ga0157378_11493973Not Available720Open in IMG/M
3300013297|Ga0157378_13316377Not Available500Open in IMG/M
3300015268|Ga0182154_1009810Not Available863Open in IMG/M
3300015268|Ga0182154_1011006Not Available837Open in IMG/M
3300015269|Ga0182113_1012808Not Available904Open in IMG/M
3300015274|Ga0182188_1050277Not Available533Open in IMG/M
3300015275|Ga0182172_1003640Not Available1162Open in IMG/M
3300015275|Ga0182172_1017983Not Available752Open in IMG/M
3300015275|Ga0182172_1019273Not Available739Open in IMG/M
3300015275|Ga0182172_1038772Not Available614Open in IMG/M
3300015275|Ga0182172_1061324Not Available538Open in IMG/M
3300015275|Ga0182172_1068101Not Available521Open in IMG/M
3300015279|Ga0182174_1036389Not Available648Open in IMG/M
3300015279|Ga0182174_1038987Not Available635Open in IMG/M
3300015279|Ga0182174_1060830Not Available559Open in IMG/M
3300015281|Ga0182160_1020735Not Available745Open in IMG/M
3300015282|Ga0182124_1025254Not Available702Open in IMG/M
3300015282|Ga0182124_1029167Not Available675Open in IMG/M
3300015282|Ga0182124_1033014Not Available653Open in IMG/M
3300015283|Ga0182156_1007917Not Available990Open in IMG/M
3300015283|Ga0182156_1017665Not Available796Open in IMG/M
3300015283|Ga0182156_1038804Not Available639Open in IMG/M
3300015285|Ga0182186_1050869Not Available582Open in IMG/M
3300015285|Ga0182186_1065677Not Available540Open in IMG/M
3300015286|Ga0182176_1030725Not Available693Open in IMG/M
3300015286|Ga0182176_1048106Not Available604Open in IMG/M
3300015286|Ga0182176_1083471Not Available506Open in IMG/M
3300015287|Ga0182171_1018213Not Available785Open in IMG/M
3300015288|Ga0182173_1013878Not Available836Open in IMG/M
3300015289|Ga0182138_1042605Not Available625Open in IMG/M
3300015291|Ga0182125_1010482Not Available937Open in IMG/M
3300015291|Ga0182125_1032861Not Available685Open in IMG/M
3300015291|Ga0182125_1064662Not Available564Open in IMG/M
3300015291|Ga0182125_1080105Not Available529Open in IMG/M
3300015291|Ga0182125_1085479Not Available519Open in IMG/M
3300015291|Ga0182125_1087643Not Available515Open in IMG/M
3300015292|Ga0182141_1007052Not Available1037Open in IMG/M
3300015292|Ga0182141_1050476Not Available606Open in IMG/M
3300015292|Ga0182141_1054977Not Available591Open in IMG/M
3300015294|Ga0182126_1080990Not Available530Open in IMG/M
3300015295|Ga0182175_1031385Not Available704Open in IMG/M
3300015295|Ga0182175_1039839Not Available659Open in IMG/M
3300015295|Ga0182175_1054075Not Available603Open in IMG/M
3300015296|Ga0182157_1041704Not Available660Open in IMG/M
3300015296|Ga0182157_1092758Not Available520Open in IMG/M
3300015298|Ga0182106_1012124All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera941Open in IMG/M
3300015300|Ga0182108_1032432Not Available719Open in IMG/M
3300015300|Ga0182108_1086868Not Available536Open in IMG/M
3300015302|Ga0182143_1035574Not Available693Open in IMG/M
3300015302|Ga0182143_1049054Not Available633Open in IMG/M
3300015302|Ga0182143_1102888Not Available504Open in IMG/M
3300015303|Ga0182123_1017296Not Available819Open in IMG/M
3300015303|Ga0182123_1080893Not Available534Open in IMG/M
3300015304|Ga0182112_1028824Not Available738Open in IMG/M
3300015304|Ga0182112_1065853Not Available582Open in IMG/M
3300015305|Ga0182158_1064672Not Available583Open in IMG/M
3300015305|Ga0182158_1088856Not Available529Open in IMG/M
3300015307|Ga0182144_1034640Not Available708Open in IMG/M
3300015307|Ga0182144_1046590Not Available650Open in IMG/M
3300015307|Ga0182144_1066634Not Available585Open in IMG/M
3300015308|Ga0182142_1017709Not Available874Open in IMG/M
3300015314|Ga0182140_1012696Not Available957Open in IMG/M
3300015314|Ga0182140_1047727Not Available660Open in IMG/M
3300015314|Ga0182140_1056863Not Available627Open in IMG/M
3300015314|Ga0182140_1062020Not Available611Open in IMG/M
3300015314|Ga0182140_1067228Not Available596Open in IMG/M
3300015314|Ga0182140_1087323Not Available550Open in IMG/M
3300015314|Ga0182140_1106059Not Available517Open in IMG/M
3300015321|Ga0182127_1058309Not Available639Open in IMG/M
3300015321|Ga0182127_1064362Not Available620Open in IMG/M
3300015321|Ga0182127_1107588Not Available527Open in IMG/M
3300015322|Ga0182110_1055903Not Available645Open in IMG/M
3300015322|Ga0182110_1061001Not Available629Open in IMG/M
3300015323|Ga0182129_1071408Not Available584Open in IMG/M
3300015341|Ga0182187_1098950Not Available648Open in IMG/M
3300015341|Ga0182187_1124036Not Available599Open in IMG/M
3300015342|Ga0182109_1176620Not Available550Open in IMG/M
3300015342|Ga0182109_1198855Not Available525Open in IMG/M
3300015342|Ga0182109_1212677Not Available512Open in IMG/M
3300015343|Ga0182155_1063450Not Available791Open in IMG/M
3300015343|Ga0182155_1126474Not Available623Open in IMG/M
3300015345|Ga0182111_1097037Not Available716Open in IMG/M
3300015345|Ga0182111_1131789Not Available639Open in IMG/M
3300015345|Ga0182111_1170351Not Available579Open in IMG/M
3300015345|Ga0182111_1215078Not Available529Open in IMG/M
3300015346|Ga0182139_1070606Not Available805Open in IMG/M
3300015346|Ga0182139_1100690Not Available707Open in IMG/M
3300015346|Ga0182139_1132001Not Available639Open in IMG/M
3300015346|Ga0182139_1168131Not Available583Open in IMG/M
3300015346|Ga0182139_1208762Not Available536Open in IMG/M
3300015346|Ga0182139_1229446Not Available516Open in IMG/M
3300015346|Ga0182139_1245891Not Available501Open in IMG/M
3300015351|Ga0182161_1101269Not Available737Open in IMG/M
3300015351|Ga0182161_1161552Not Available616Open in IMG/M
3300015351|Ga0182161_1188188Not Available579Open in IMG/M
3300015351|Ga0182161_1241374Not Available524Open in IMG/M
3300015351|Ga0182161_1263977Not Available505Open in IMG/M
3300015355|Ga0182159_1099740Not Available859Open in IMG/M
3300015355|Ga0182159_1155573Not Available715Open in IMG/M
3300015355|Ga0182159_1192445All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius653Open in IMG/M
3300015355|Ga0182159_1199876Not Available643Open in IMG/M
3300015355|Ga0182159_1279030Not Available556Open in IMG/M
3300015361|Ga0182145_1073215All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius698Open in IMG/M
3300015361|Ga0182145_1074061Not Available695Open in IMG/M
3300017410|Ga0182207_1107642Not Available596Open in IMG/M
3300017411|Ga0182208_1064454Not Available626Open in IMG/M
3300017411|Ga0182208_1070226Not Available609Open in IMG/M
3300017411|Ga0182208_1102048Not Available542Open in IMG/M
3300017411|Ga0182208_1102638Not Available541Open in IMG/M
3300017413|Ga0182222_1059958Not Available587Open in IMG/M
3300017417|Ga0182230_1047889Not Available750Open in IMG/M
3300017417|Ga0182230_1076149Not Available604Open in IMG/M
3300017420|Ga0182228_1025934Not Available929Open in IMG/M
3300017420|Ga0182228_1056997Not Available678Open in IMG/M
3300017420|Ga0182228_1066382Not Available641Open in IMG/M
3300017425|Ga0182224_1075766Not Available646Open in IMG/M
3300017427|Ga0182190_1085460Not Available631Open in IMG/M
3300017427|Ga0182190_1127948Not Available549Open in IMG/M
3300017427|Ga0182190_1158942Not Available509Open in IMG/M
3300017430|Ga0182192_1166135Not Available510Open in IMG/M
3300017433|Ga0182206_1142617Not Available521Open in IMG/M
3300017436|Ga0182209_1114890Not Available576Open in IMG/M
3300017436|Ga0182209_1133675Not Available548Open in IMG/M
3300017438|Ga0182191_1168217Not Available517Open in IMG/M
3300017442|Ga0182221_1121307Not Available560Open in IMG/M
3300017442|Ga0182221_1151344Not Available522Open in IMG/M
3300017443|Ga0182193_1085847Not Available669Open in IMG/M
3300017443|Ga0182193_1106066Not Available624Open in IMG/M
3300017443|Ga0182193_1190055Not Available509Open in IMG/M
3300017681|Ga0182226_1028021Not Available1002Open in IMG/M
3300017682|Ga0182229_1037350Not Available832Open in IMG/M
3300017683|Ga0182218_1084381Not Available606Open in IMG/M
3300017683|Ga0182218_1155982Not Available500Open in IMG/M
3300017684|Ga0182225_1055751Not Available675Open in IMG/M
3300017684|Ga0182225_1089141Not Available585Open in IMG/M
3300017684|Ga0182225_1091935Not Available579Open in IMG/M
3300017684|Ga0182225_1128272Not Available522Open in IMG/M
3300017685|Ga0182227_1051621Not Available733Open in IMG/M
3300017686|Ga0182205_1098058Not Available608Open in IMG/M
3300017690|Ga0182223_1061661Not Available611Open in IMG/M
3300025908|Ga0207643_10652942Not Available679Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere96.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.07%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.38%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017681Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068866_1141440923300005718Miscanthus RhizosphereCALGPDGVLKDTRFILVQAECPYVQSVAACVISTEKGS*
Ga0157374_1200742713300013296Miscanthus RhizosphereYNYCALGPDGALKDTMFIRVRAECPYVQSAAARVISTEKGS*
Ga0157378_1149397313300013297Miscanthus RhizosphereALGPDGALMDTRFILVRAECLYVQSVAARVISTENGS*
Ga0157378_1331637713300013297Miscanthus RhizosphereTLGSDGALKDTRYILVRVEYPYVQFVAARIISTMNGA*
Ga0182154_100981013300015268Miscanthus PhyllosphereLGSDGVLKDTRFILVRAECSYVQFVAARVISTENGS*
Ga0182154_101100623300015268Miscanthus PhyllosphereSDGALKDTRFILVRAECPYVQFAAACVISTVNDL*
Ga0182113_101280823300015269Miscanthus PhyllosphereTLGSDGALKDTRFILVRAEYPYVQFVAARVISTMNGS*
Ga0182188_105027713300015274Miscanthus PhyllosphereTLGPDGVLKDTRFILVRAECPYVQFTAARVISTKKGS*
Ga0182172_100364013300015275Miscanthus PhyllosphereVLGSDGALKDTRFILIRAESPYVQFVAARVISTMNG
Ga0182172_101798313300015275Miscanthus PhyllosphereLGPDGALKDTRFILVQAECPYVQSVVAHVISAESGS*
Ga0182172_101927313300015275Miscanthus PhyllosphereGPDGALMDTRFILVRAKCPYVQSVAARVISTENGS*
Ga0182172_103877213300015275Miscanthus PhyllosphereGPDGVLKDTRFILVRAECPYVESTVAACIVSTEYGS*
Ga0182172_106132413300015275Miscanthus PhyllosphereALGSDGALKDTRFILVRAESPYVQFVAARVISTVNGLQ*
Ga0182172_106810113300015275Miscanthus PhyllosphereLGPDGALKDTRFILVWAECPYVQSVAAHVISTENGS*
Ga0182174_103638913300015279Miscanthus PhyllosphereVLGPDGALKDTRFILVRAECPYVQSVAARVISAKSG
Ga0182174_103898713300015279Miscanthus PhyllosphereLGSDGALKDTRFILVRAECPYVQSAAARIISTRKGS*
Ga0182174_106083013300015279Miscanthus PhyllosphereSALGPDGVLKDTRFILVRAECPYVQFAAARVISTEKCS*
Ga0182160_102073523300015281Miscanthus PhyllosphereTLGLDGALKDTRVILVRAECPYVQSVAARVISTE*
Ga0182124_102525413300015282Miscanthus PhyllosphereALGSDGALKDTRFILVRAECPYVQFAAARVISTVNGL*
Ga0182124_102916713300015282Miscanthus PhyllosphereVLGPDGALKDTRFILVQAEHPYVQSAAARVTSTEKGS*
Ga0182124_103301413300015282Miscanthus PhyllosphereALGPYGALKDTRFILVRVECPYVQSVAARVISAESGS*
Ga0182156_100791713300015283Miscanthus PhyllosphereICCVLGPDGVLKDTRFIPVRAECPYVQFAAACVISTEKGS*
Ga0182156_101766513300015283Miscanthus PhyllosphereIYICCALRSNGVLKDTRFVLVWAECPYVRFAAAHVISTEKGS*
Ga0182156_103880413300015283Miscanthus PhyllosphereMLGPDGVLKDTRFILVRAECPYIQSAAARVISTKKG
Ga0182186_105086913300015285Miscanthus PhyllosphereGSDGALKDTRFILVRAECPYVQFVAARVISTVNGL*
Ga0182186_106567713300015285Miscanthus PhyllosphereSDGALKDTRFILVRAKCPYIQFVAARVISTVNGS*
Ga0182176_103072513300015286Miscanthus PhyllosphereLGPDGALMDTRFILVRAECPYVQSVAARVISTKNGS*
Ga0182176_104810613300015286Miscanthus PhyllosphereLGSDGALKDTRFILVRAEYPYVQFVAARVISTVNGS*
Ga0182176_108347113300015286Miscanthus PhyllosphereVLGPDGVLKDTRFRLVRAECPFVQFATAAYIISSERFIVEG
Ga0182171_101821313300015287Miscanthus PhyllosphereGSDGALKDTRFILVRAESPYVQFVAARVISTENGS*
Ga0182173_101387813300015288Miscanthus PhyllosphereALGSDGVLKDTRFILIWAECLYVQFVAARVISTKKGS*
Ga0182138_104260513300015289Miscanthus PhyllosphereGLDGALKDTRFILVRVECPYIQFATARVISTKKGS*
Ga0182125_101048213300015291Miscanthus PhyllosphereSDGALKDTRFILVRAESPYVQFVAARVISTVNGL*
Ga0182125_103286113300015291Miscanthus PhyllosphereNLYCCALGSDGVLKDTRFILVRAECLYVQFAAAYVISTKKGS*
Ga0182125_106466213300015291Miscanthus PhyllosphereCTLGSDGALKDTRFILVRVEYPYVQFVAARVISTVNGS*
Ga0182125_108010513300015291Miscanthus PhyllosphereSDGALKDTRFILVRAEYRYVQFIAASVISTVNCS*
Ga0182125_108547913300015291Miscanthus PhyllosphereALGSDGALKDTGFILVRAERPYVQFVAACVISTVNDL*
Ga0182125_108764313300015291Miscanthus PhyllosphereALDSDGVLKDTRFILVRAECPHVQFAAARVISTEK*
Ga0182141_100705223300015292Miscanthus PhyllosphereSDGALKDTRFILVRAERPYVQFAAACVISTVNDL*
Ga0182141_105047613300015292Miscanthus PhyllosphereGSDGVLKDTRFILVQAECPYVQCAVARVISTEKCS*
Ga0182141_105497713300015292Miscanthus PhyllosphereVIGCGQALNDIGFILVWAEYPYVQFAAARVISTEKGS
Ga0182126_108099013300015294Miscanthus PhyllosphereSDGALKDIRFILGRAEYPYIQFAAARVIITKKGS*
Ga0182175_103138513300015295Miscanthus PhyllosphereCALGSDGALKDTRFILVRAECPYVQFAAACVISTVNGL*
Ga0182175_103983913300015295Miscanthus PhyllosphereALGSDGVLKDTRFILVRAERPYVQFAAARVINTKKGS*
Ga0182175_105407513300015295Miscanthus PhyllosphereGPDGALKDTRFILVQAECPYVQSVVARVISTKSSS*
Ga0182157_104170413300015296Miscanthus PhyllosphereLCALGPDGALKDTRFILVRAECPYVQSVAARVISAENGS*
Ga0182157_109275813300015296Miscanthus PhyllosphereSLNGVLKDTRFILIRTEYLYVQFAAAHVISTEKGL*
Ga0182106_101212433300015298Miscanthus PhyllospherePDGALKDTRFILVQAECPYVQSVAARVISTENGS*
Ga0182108_103243213300015300Miscanthus PhyllosphereVLGSDGALKGTRFILVRAECPYVQFATARVISTVNGL*
Ga0182108_108686813300015300Miscanthus PhyllosphereSDGVLKDTRFILVRAEYPYVQFVVARVISTVNGS*
Ga0182143_103557413300015302Miscanthus PhyllosphereCALGPDGALKGTRFILVRAECPYVQSVVAHVISTENGL*
Ga0182143_104905413300015302Miscanthus PhyllosphereLGSDGALKDTRFILVRAECPYVQFVAARVISTVNGL*
Ga0182143_110288813300015302Miscanthus PhyllosphereALGSDGALNDTRFILVWAECPYVQFVAARVISTVNGS*
Ga0182123_101729613300015303Miscanthus PhyllosphereLGLDGALKDTRFILVRAECPYVHSIAAHVISTKNGS*
Ga0182123_108089313300015303Miscanthus PhyllosphereLGPDGVLKDTRFILVRAECPYVQSAAAACIISTEYGS*
Ga0182112_102882413300015304Miscanthus PhyllosphereMLGSDGVLKDTRFILVRAEYPYVQFVAARVISTGK
Ga0182112_106585313300015304Miscanthus PhyllosphereLGPDGALKDTRFILVRAECPYVYSAAARVISTKKGS*
Ga0182158_106467213300015305Miscanthus PhyllosphereGPDGALKDTRVILVRAECPYVQSAAGRVISTEKGS*
Ga0182158_108885613300015305Miscanthus PhyllosphereALGSDGALKDTRFILVRAECPYVQFVAARVISTENGS*
Ga0182144_103464013300015307Miscanthus PhyllosphereALGPDGALMDIRFILVRAECPYVQSVAARVISTE*
Ga0182144_104659013300015307Miscanthus PhyllosphereICCALGLDSVLKNTRFILVRTEYSYVQFATARVISTEKGS*
Ga0182144_106663423300015307Miscanthus PhyllosphereVLGSNGALKDTRFILLRAECPYVQFVAAHVISTVNGL*
Ga0182142_101770923300015308Miscanthus PhyllosphereLGSDGALKDTRFILVRAERPYVQFAAARVISTVNGL*
Ga0182140_101269613300015314Miscanthus PhyllosphereMLGSDGALKDTRFILVRAEYPYVQFVAARVISTVN
Ga0182140_104772713300015314Miscanthus PhyllosphereGSDGALKDTRFILVRAECPYVQFVATRVISTVNGL*
Ga0182140_105686313300015314Miscanthus PhyllosphereLGPDGALKDTRFILVRAEYPYFQYVAARVISTENSL*
Ga0182140_106202013300015314Miscanthus PhyllosphereCALGPDGVLKDTRFILVRAEYPYVQFAAAARVISIEKCL*
Ga0182140_106722823300015314Miscanthus PhyllosphereALGPDGALMATRFILVRAECPYVQSIAARVISTE*
Ga0182140_108732313300015314Miscanthus PhyllosphereTLGPDGALKDTRFILVRAECPYVQSVAAHVISAESGS*
Ga0182140_110605913300015314Miscanthus PhyllosphereGPDGVLKDIRFILVRAECPYVQSAAAACIISTKYGS*
Ga0182127_105830923300015321Miscanthus PhyllosphereVLGPDGALKDTRFILIRDECPYVQSVAARVISTENGL*
Ga0182127_106436213300015321Miscanthus PhyllosphereIYNCCALCPDGALKDTRFILVRAECPYVQSAAAHVISTEKGS*
Ga0182127_110758813300015321Miscanthus PhyllospherePDGALNDTRFILVRAEYPYVKSAASRVINTEKGS*
Ga0182110_105175513300015322Miscanthus PhyllosphereLYYCALGLDGVLKDTRFILVREECPYVQFMAVAHVIS
Ga0182110_105590313300015322Miscanthus PhyllosphereCALGPDGALQDTRVILVRAECPYVQSVAACVIRTE*
Ga0182110_106100113300015322Miscanthus PhyllospherePDGALKDTRFILVRAECPYVQSAVAALVISTEKGS*
Ga0182129_107140813300015323Miscanthus PhyllosphereALGSDSVLKDIRFILVRAEYPYIQSAATRVISTEKGS*
Ga0182187_109895013300015341Miscanthus PhyllospherePDGALKDTRFILVRAECPYVQSVAARLISAESGS*
Ga0182187_112403613300015341Miscanthus PhyllosphereTLGPDSALKDTRFILVQAECPYVQSVAACVISTEKGS*
Ga0182109_117662013300015342Miscanthus PhyllosphereCTLGPDGALKDTRFILVRVKCPYVQSAAAHVISTEKGS*
Ga0182109_119885513300015342Miscanthus PhyllosphereLGSDGALKDTRFILVRAESPYVQFVAARVISTVNSLQ*
Ga0182109_121267713300015342Miscanthus PhyllosphereVLGSDGALKDTRFILVRVERPYVQSAAARVISTKNGS*
Ga0182155_106345013300015343Miscanthus PhyllosphereCALGSDGALKDTRFILVWAECPYVQSAAARVISTEKDL*
Ga0182155_112647413300015343Miscanthus PhyllosphereCALGPDGVLKDTRFILVWAECPYVQFAAAHVISTEKGS*
Ga0182111_109703713300015345Miscanthus PhyllosphereVLDSDGVLKDTRFILVQAEYLYVQFAAARVISTEKG
Ga0182111_113178913300015345Miscanthus PhyllosphereGPDGALKDTRFILVRAEYPYIQFVAARVISTVNGS*
Ga0182111_117035113300015345Miscanthus PhyllosphereCALGSDGVLKDTRFILVRSECPYVQFAVARVISTEKGS*
Ga0182111_121507813300015345Miscanthus PhyllosphereCTLGPDGALKDTRFILVWAECPYVQSIAARVISTERGS*
Ga0182139_107060613300015346Miscanthus PhyllosphereALTLDGVLKDTRFILVQAEHPYIQFATARVISTEKGS*
Ga0182139_110069023300015346Miscanthus PhyllosphereLGPDGALKDTRFILVRAECPYVQSAAARVISTKKGS*
Ga0182139_113200113300015346Miscanthus PhyllosphereALGSDGALKDTRFILVRAECPYVQFVAAHVISTVNGL*
Ga0182139_116813113300015346Miscanthus PhyllosphereCMLGPDGALKDMRFILVWAERPYVHSTAAHVINTKNGS*
Ga0182139_120876213300015346Miscanthus PhyllosphereGPDGALMEIRFIRVRVECPYIQSVAARVISTESGS*
Ga0182139_122944613300015346Miscanthus PhyllosphereALGPDGALKDTRFILVRSEHPYIQSTVAHVISTEKGS*
Ga0182139_124589123300015346Miscanthus PhyllosphereLCALGPDGALKDTRFIMVQAECPYVQSVAARVISTENGS*
Ga0182177_107483713300015347Miscanthus PhyllosphereALGLDGVLKDTRFILVLAQCPYIQFAAACVISTGKGS*
Ga0182161_110126913300015351Miscanthus PhyllosphereALVPNGVLKDTRFILVQAECPYDQFAVAHVISTEKGS*
Ga0182161_116155213300015351Miscanthus PhyllosphereYNCCALGSDGVLKDTRFILGWAECPYVQFAAARVISTEKGS*
Ga0182161_118818813300015351Miscanthus PhyllosphereLGPDGVLKDTRFILVRAECPYVQSAAVACIISTKYDL*
Ga0182161_124137413300015351Miscanthus PhyllosphereMLGPDGALKDTMFILVRAECPYVQSVATRVISTESGL
Ga0182161_126397713300015351Miscanthus PhyllosphereGSDGALKDTRFILVRAECPYVQFVAARVISTVNGS*
Ga0182159_109974013300015355Miscanthus PhyllosphereGSDGVLKDTRFILVWAECPYVQFVAARVISTKKGS*
Ga0182159_115557313300015355Miscanthus PhyllosphereSDGALKDTRFILARAECPYIQSAAVARVISTEKGS*
Ga0182159_119244523300015355Miscanthus PhyllosphereMLKDIRFILVRTECPYVQFAAVARVISTEKVRSRGT
Ga0182159_119987613300015355Miscanthus PhyllosphereCALGPDGVLKDTRFILVRAECPYVQSVVARVISTESGS*
Ga0182159_127903013300015355Miscanthus PhyllosphereALGSDGVLKNTRFILVQAECPYVQFATARVISTKKGS*
Ga0182145_107321513300015361Miscanthus PhyllosphereVLGSDGALKDTRFILVRAECPYVQFVAARVISTVNG
Ga0182145_107406113300015361Miscanthus PhyllosphereLGSDGVLKDTRFILVRAEYPYVQFAAARVISTGKGL*
Ga0182207_110764213300017410Miscanthus PhyllosphereIYICCALGPDDVLRDTMFILVRAEYPYVQFTVARVISTEK
Ga0182208_106445413300017411Miscanthus PhyllosphereALGSDGALKDTRFILVRAECPYVQFAATRVISTVNGL
Ga0182208_107022613300017411Miscanthus PhyllosphereALGSNGVLKDTRLILVWAECPYVQFAAARVISTEKGS
Ga0182208_110204813300017411Miscanthus PhyllosphereYIRCALGPDGVLKDTRFILVRVEHPYVQFVAAHVISTKKGS
Ga0182208_110263813300017411Miscanthus PhyllosphereALGSDGALKDTRFILVWAECPYIQFVAARVISTVNGL
Ga0182222_105995813300017413Miscanthus PhyllosphereALGPDGALKDTRFILVRAECPYVQSIAARVISTENGS
Ga0182230_104788913300017417Miscanthus PhyllosphereALGPDGAPKDTRFILVRAECPYVQSVVARVISIEKGS
Ga0182230_107614913300017417Miscanthus PhyllosphereCALGPGGALKDTRFILVRAECPYVHSTAARVISTKKGS
Ga0182228_102593423300017420Miscanthus PhyllosphereGSDGALKDTRFILVRAERPYVQFAASCVISTVNDL
Ga0182228_105699713300017420Miscanthus PhyllosphereCCALGSDGVLKDTRFILVRTERPYVQSTTTRVISTEKGS
Ga0182228_106638213300017420Miscanthus PhyllosphereALGPDGALKDTRFILVRPECPYVQSAIARVISTEKGS
Ga0182224_107576623300017425Miscanthus PhyllosphereGSDGGLKGTRFILVRAKCPYVQFAAARVISTVNGL
Ga0182190_108546013300017427Miscanthus PhyllosphereCTLGSDGALKDTRFILVRAEYPYVQFVAAHVISTMNGS
Ga0182190_112794813300017427Miscanthus PhyllosphereALGLDGALKDIKFILVRAECFYVQFAAACVISTVNGL
Ga0182190_115894223300017427Miscanthus PhyllosphereGSDGALKDTRFILVRAECPYVQFVAAHVISTENGS
Ga0182192_116613513300017430Miscanthus PhyllosphereALGSDGALKDTRFILVRAEYPYVQFVAARVISTMNGS
Ga0182206_114261723300017433Miscanthus PhyllosphereGSDGALKDTRFILVRAEYPYVQFVAARVISTINGL
Ga0182209_111489013300017436Miscanthus PhyllosphereLDAFSALGSDGVLKDIRFILVWAECPYVQFAAARVISTEKDS
Ga0182209_113367523300017436Miscanthus PhyllosphereCTLGSDGVLKDTRFILVRAKCPYVQSTAAACIISTEYGS
Ga0182191_116821713300017438Miscanthus PhyllosphereGPDGALKDTRFILVQAECPYVQSAAAHVISAEKGLQ
Ga0182221_112130713300017442Miscanthus PhyllosphereALGSDGALKDTRFILVRAESPYVQFVAARVISTVNGL
Ga0182221_115134413300017442Miscanthus PhyllosphereLGPDGALKDTRFILVRAECPYVQSAAAYVISTETGS
Ga0182193_108584713300017443Miscanthus PhyllosphereCTLGSDGALKDIRFILVQAECLYVQFVAARVISTVNDL
Ga0182193_110606613300017443Miscanthus PhyllosphereLGPNGALKDIRFILVWAECPYVQSIAARVISTGKGS
Ga0182193_119005513300017443Miscanthus PhyllosphereALGSDGALKDTRFILVRAECLYVQFVAARVISTVNGL
Ga0182226_102802113300017681Miscanthus PhyllosphereLGSDGALKDTRFILVRAECPYVQFAAARVISTVNGLQ
Ga0182229_103735013300017682Miscanthus PhyllosphereGSNGALKDTRFILLRAECPYVQFVAAHVISTVNGL
Ga0182218_108438113300017683Miscanthus PhyllosphereALGSDGALKDTGFILVRAERPYVQFVAACVISTVNDL
Ga0182218_115598213300017683Miscanthus PhyllosphereALGSDGALKDIRFILVRAEYPYVQFVAAHVISTVNGS
Ga0182225_105575113300017684Miscanthus PhyllosphereYALGSDGVLKDTRFILVQAECPYIQSAAARVISTEKGS
Ga0182225_108914113300017684Miscanthus PhyllosphereGLDGALKNTRFILVRAERPYVQFATVAHVINTKNGL
Ga0182225_109193513300017684Miscanthus PhyllosphereCALGPDGALKDMRFILVRAERPYIQSAADAAHVISIENGS
Ga0182225_112827213300017684Miscanthus PhyllosphereALGSDDVLKDTRFILVRTKCPCVQSAAARGISTEKDS
Ga0182227_105162113300017685Miscanthus PhyllosphereALGPDGALKDTRFILVRTKCPYVQSVAARVISTKSGS
Ga0182205_109805813300017686Miscanthus PhyllosphereLGPDGALKDTRFILVRAECPYVQSVAARVISTKRGS
Ga0182223_106166123300017690Miscanthus PhyllosphereGSDGALKDTRFILVRAEYPYVQFVAARVISTMNGS
Ga0207643_1065294213300025908Miscanthus RhizosphereMLGPDGALMDTRFILVRAECLYVQSVAARVISTKNGS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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