Metagenome / Metatranscriptome Family F050087

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050087
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	58 residues
Representative Sequence	MKITGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLVLFTRAHLVAKRGNE
Number of Associated Samples	86
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.31 %
% of genes near scaffold ends (potentially truncated)	14.48 %
% of genes from short scaffolds (< 2000 bps)	73.10 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.172 % of family members)
Environment Ontology (ENVO)	Unclassified (60.690 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.22% β-sheet: 0.00% Coil/Unstructured: 36.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00909	Ammonium_transp	41.38
PF13520	AA_permease_2	4.14
PF13620	CarboxypepD_reg	2.07
PF13672	PP2C_2	1.38
PF08032	SpoU_sub_bind	0.69
PF13191	AAA_16	0.69
PF13847	Methyltransf_31	0.69
PF13426	PAS_9	0.69
PF16355	DUF4982	0.69
PF00127	Copper-bind	0.69
PF05598	DUF772	0.69
PF06289	FlbD	0.69
PF00392	GntR	0.69
PF08668	HDOD	0.69
PF00005	ABC_tran	0.69
PF13560	HTH_31	0.69
PF13649	Methyltransf_25	0.69
PF13447	Multi-haem_cyto	0.69
PF02702	KdpD	0.69
PF03009	GDPD	0.69
PF06835	LptC	0.69
PF00831	Ribosomal_L29	0.69
PF07669	Eco57I	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	41.38
COG0255	Ribosomal protein L29	Translation, ribosomal structure and biogenesis [J]	0.69
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.69
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.69
COG1582	Swarming motility protein SwrD	Cell motility [N]	0.69
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
All Organisms	root	All Organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
cellular organisms	root	All Organisms → cellular organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.45 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.45 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	3.45 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	3.45 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.69 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.90 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3.45 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.69 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10009221	All Organisms → cellular organisms → Bacteria	2880	Open in IMG/M
3300005538\|Ga0070731_10035607	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300009523\|Ga0116221_1543336	Not Available	510	Open in IMG/M
3300009547\|Ga0116136_1027021	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300009552\|Ga0116138_1000017	All Organisms → cellular organisms → Bacteria	149796	Open in IMG/M
3300009616\|Ga0116111_1046013	Not Available	1289	Open in IMG/M
3300009639\|Ga0116122_1044235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1519	Open in IMG/M
3300009640\|Ga0116126_1202376	Not Available	638	Open in IMG/M
3300009839\|Ga0116223_10262555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300010339\|Ga0074046_10034097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3457	Open in IMG/M
3300010339\|Ga0074046_10544056	Not Available	691	Open in IMG/M
3300010341\|Ga0074045_10527641	Not Available	757	Open in IMG/M
3300010341\|Ga0074045_10938229	Not Available	545	Open in IMG/M
3300010343\|Ga0074044_10009960	All Organisms → cellular organisms → Bacteria → Acidobacteria	7293	Open in IMG/M
3300010379\|Ga0136449_100031276	All Organisms → cellular organisms → Bacteria	12858	Open in IMG/M
3300010379\|Ga0136449_100241413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3369	Open in IMG/M
3300010379\|Ga0136449_100462106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2221	Open in IMG/M
3300010379\|Ga0136449_100763978	Not Available	1606	Open in IMG/M
3300010379\|Ga0136449_102240725	Not Available	795	Open in IMG/M
3300014151\|Ga0181539_1001808	All Organisms → cellular organisms → Bacteria	22785	Open in IMG/M
3300014153\|Ga0181527_1293234	Not Available	643	Open in IMG/M
3300014155\|Ga0181524_10105671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1559	Open in IMG/M
3300014159\|Ga0181530_10389046	Not Available	712	Open in IMG/M
3300014160\|Ga0181517_10018254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4963	Open in IMG/M
3300014160\|Ga0181517_10376252	Not Available	732	Open in IMG/M
3300014165\|Ga0181523_10213379	Not Available	1113	Open in IMG/M
3300014169\|Ga0181531_10391706	Not Available	854	Open in IMG/M
3300014490\|Ga0182010_10227009	Not Available	986	Open in IMG/M
3300014493\|Ga0182016_10116582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1858	Open in IMG/M
3300014493\|Ga0182016_10483922	Not Available	718	Open in IMG/M
3300014494\|Ga0182017_10901757	Not Available	532	Open in IMG/M
3300014496\|Ga0182011_10288681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300014499\|Ga0182012_10096059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2237	Open in IMG/M
3300014502\|Ga0182021_11260818	Not Available	890	Open in IMG/M
3300014502\|Ga0182021_12587081	Not Available	610	Open in IMG/M
3300014655\|Ga0181516_10499156	Not Available	624	Open in IMG/M
3300014838\|Ga0182030_11419042	Not Available	578	Open in IMG/M
3300014839\|Ga0182027_10024885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7900	Open in IMG/M
3300014839\|Ga0182027_10068266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4377	Open in IMG/M
3300014839\|Ga0182027_10554435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1244	Open in IMG/M
3300017925\|Ga0187856_1000691	All Organisms → cellular organisms → Bacteria	29249	Open in IMG/M
3300017929\|Ga0187849_1076362	Not Available	1473	Open in IMG/M
3300017934\|Ga0187803_10061974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1471	Open in IMG/M
3300017935\|Ga0187848_10168786	Not Available	954	Open in IMG/M
3300017940\|Ga0187853_10127499	Not Available	1234	Open in IMG/M
3300017948\|Ga0187847_10736586	Not Available	556	Open in IMG/M
3300017970\|Ga0187783_10003928	All Organisms → cellular organisms → Bacteria	10979	Open in IMG/M
3300017970\|Ga0187783_11065392	Not Available	582	Open in IMG/M
3300017972\|Ga0187781_10029174	All Organisms → cellular organisms → Bacteria	3812	Open in IMG/M
3300017972\|Ga0187781_10186775	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300017972\|Ga0187781_10308400	Not Available	1123	Open in IMG/M
3300017975\|Ga0187782_10961307	Not Available	663	Open in IMG/M
3300017988\|Ga0181520_10106426	Not Available	2386	Open in IMG/M
3300017988\|Ga0181520_10337212	Not Available	1114	Open in IMG/M
3300017988\|Ga0181520_10616705	Not Available	751	Open in IMG/M
3300017996\|Ga0187891_1176334	Not Available	743	Open in IMG/M
3300018004\|Ga0187865_1223438	Not Available	635	Open in IMG/M
3300018005\|Ga0187878_1049484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1904	Open in IMG/M
3300018013\|Ga0187873_1291011	Not Available	600	Open in IMG/M
3300018014\|Ga0187860_1226366	Not Available	753	Open in IMG/M
3300018016\|Ga0187880_1463455	Not Available	523	Open in IMG/M
3300018017\|Ga0187872_10329089	Not Available	661	Open in IMG/M
3300018026\|Ga0187857_10320396	Not Available	706	Open in IMG/M
3300018034\|Ga0187863_10159500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1258	Open in IMG/M
3300018035\|Ga0187875_10134564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1390	Open in IMG/M
3300018038\|Ga0187855_10061374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	2316	Open in IMG/M
3300018040\|Ga0187862_10759324	Not Available	564	Open in IMG/M
3300018042\|Ga0187871_10559178	Not Available	634	Open in IMG/M
3300018042\|Ga0187871_10662368	Not Available	580	Open in IMG/M
3300018047\|Ga0187859_10756748	Not Available	555	Open in IMG/M
3300018062\|Ga0187784_10522478	Not Available	956	Open in IMG/M
3300018062\|Ga0187784_11205528	Not Available	600	Open in IMG/M
3300018085\|Ga0187772_10491623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300018085\|Ga0187772_10848654	Not Available	661	Open in IMG/M
3300018085\|Ga0187772_10979564	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	617	Open in IMG/M
3300018088\|Ga0187771_10307541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300018088\|Ga0187771_11490457	Not Available	574	Open in IMG/M
3300018090\|Ga0187770_10191934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1571	Open in IMG/M
3300018090\|Ga0187770_11713441	Not Available	514	Open in IMG/M
3300019082\|Ga0187852_1300081	Not Available	640	Open in IMG/M
3300019082\|Ga0187852_1447089	Not Available	500	Open in IMG/M
3300023068\|Ga0224554_1069789	Not Available	863	Open in IMG/M
3300025442\|Ga0208034_1062805	Not Available	721	Open in IMG/M
3300025576\|Ga0208820_1110091	Not Available	662	Open in IMG/M
3300027825\|Ga0209039_10002466	All Organisms → cellular organisms → Bacteria → Acidobacteria	15660	Open in IMG/M
3300027854\|Ga0209517_10267054	Not Available	1016	Open in IMG/M
3300027854\|Ga0209517_10309842	Not Available	919	Open in IMG/M
3300027869\|Ga0209579_10024329	All Organisms → cellular organisms → Bacteria	3362	Open in IMG/M
3300027896\|Ga0209777_10527867	Not Available	866	Open in IMG/M
3300027905\|Ga0209415_10406440	Not Available	1096	Open in IMG/M
3300027905\|Ga0209415_10465627	Not Available	989	Open in IMG/M
3300027911\|Ga0209698_11297162	Not Available	533	Open in IMG/M
3300029911\|Ga0311361_10136575	All Organisms → cellular organisms → Bacteria	3283	Open in IMG/M
3300029914\|Ga0311359_10141560	Not Available	2227	Open in IMG/M
3300031090\|Ga0265760_10279731	Not Available	586	Open in IMG/M
3300031234\|Ga0302325_11750930	Not Available	782	Open in IMG/M
3300031708\|Ga0310686_102799067	All Organisms → cellular organisms → Bacteria	4231	Open in IMG/M
3300031788\|Ga0302319_11186690	Not Available	707	Open in IMG/M
3300032069\|Ga0315282_10013848	All Organisms → cellular organisms → Bacteria	12091	Open in IMG/M
3300032160\|Ga0311301_10763711	Not Available	1339	Open in IMG/M
3300032160\|Ga0311301_10886584	Not Available	1205	Open in IMG/M
3300032770\|Ga0335085_10005459	All Organisms → cellular organisms → Bacteria	20353	Open in IMG/M
3300032770\|Ga0335085_10012619	All Organisms → cellular organisms → Bacteria	12435	Open in IMG/M
3300032770\|Ga0335085_12241358	Not Available	548	Open in IMG/M
3300032770\|Ga0335085_12307902	Not Available	538	Open in IMG/M
3300032783\|Ga0335079_10303365	Not Available	1742	Open in IMG/M
3300032783\|Ga0335079_10875463	Not Available	925	Open in IMG/M
3300032805\|Ga0335078_11352141	Not Available	809	Open in IMG/M
3300032805\|Ga0335078_11513777	Not Available	749	Open in IMG/M
3300032805\|Ga0335078_11835547	Not Available	657	Open in IMG/M
3300032805\|Ga0335078_11860345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	651	Open in IMG/M
3300032805\|Ga0335078_12079934	Not Available	604	Open in IMG/M
3300032828\|Ga0335080_11773300	Not Available	603	Open in IMG/M
3300032892\|Ga0335081_10529969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1473	Open in IMG/M
3300032892\|Ga0335081_11128637	Not Available	901	Open in IMG/M
3300032892\|Ga0335081_11484103	Not Available	752	Open in IMG/M
3300032892\|Ga0335081_12600799	Not Available	520	Open in IMG/M
3300032893\|Ga0335069_10850228	Not Available	1024	Open in IMG/M
3300032897\|Ga0335071_10885220	Not Available	841	Open in IMG/M
3300033158\|Ga0335077_10930598	Not Available	873	Open in IMG/M
3300033402\|Ga0326728_10000352	All Organisms → cellular organisms → Bacteria	185891	Open in IMG/M
3300033402\|Ga0326728_10002049	All Organisms → cellular organisms → Bacteria	68632	Open in IMG/M
3300033402\|Ga0326728_10003819	All Organisms → cellular organisms → Bacteria	45853	Open in IMG/M
3300033402\|Ga0326728_10005661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	34660	Open in IMG/M
3300033402\|Ga0326728_10009130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	24046	Open in IMG/M
3300033402\|Ga0326728_10012123	All Organisms → cellular organisms → Bacteria	19310	Open in IMG/M
3300033402\|Ga0326728_10012583	All Organisms → cellular organisms → Bacteria	18738	Open in IMG/M
3300033402\|Ga0326728_10029138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9493	Open in IMG/M
3300033402\|Ga0326728_10080916	All Organisms → cellular organisms → Bacteria	4165	Open in IMG/M
3300033402\|Ga0326728_10128434	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300033402\|Ga0326728_10169795	All Organisms → cellular organisms → Bacteria → Acidobacteria	2294	Open in IMG/M
3300033402\|Ga0326728_10351867	Not Available	1297	Open in IMG/M
3300033402\|Ga0326728_10363689	Not Available	1264	Open in IMG/M
3300033402\|Ga0326728_10383670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1213	Open in IMG/M
3300033402\|Ga0326728_10531526	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300033402\|Ga0326728_10587597	Not Available	872	Open in IMG/M
3300033402\|Ga0326728_10634293	Not Available	822	Open in IMG/M
3300033402\|Ga0326728_10726250	Not Available	740	Open in IMG/M
3300033405\|Ga0326727_10482321	Not Available	1089	Open in IMG/M
3300033405\|Ga0326727_10883314	Not Available	672	Open in IMG/M
3300033405\|Ga0326727_11064153	Not Available	581	Open in IMG/M
3300033977\|Ga0314861_0001203	All Organisms → cellular organisms → Bacteria	35292	Open in IMG/M
3300033977\|Ga0314861_0030059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3258	Open in IMG/M
3300033977\|Ga0314861_0124898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300033977\|Ga0314861_0146591	Not Available	1157	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.59%
Aquatic	Environmental → Aquatic	32.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.66%
Freshwater	Environmental → Aquatic → Freshwater	31.72%
Peat	Environmental → Terrestrial → Peat	17.93%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	37.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	11.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.69%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.17%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	14.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.34%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.28%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.45%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.38%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100092212	3300003218	Bog Forest Soil	MKITGFLLMPAGWFIVLAALVLLRAVPARNLFIAAGLGVEILGLVLFTRAHLPAKGGNE*
Ga0070731_100356072	3300005538	Surface Soil	MKITGLLMLPAGWFLVLAALVLLRTFVAQSLFVAAGSGVEIMGLVLFARGHQTPKRGRK*
Ga0116221_15433362	3300009523	Peatlands Soil	KITGLLMMPAGWIIVLAALVLLRAVLARNLFISAGLGVEILGLVLLTRSHLTAKRGNE*
Ga0116136_10270212	3300009547	Peatland	MKITGLLMMPAGLFIVLAAVVLLRTFLAQNLFVAAGIGVEILGLVLFTRSHLMAKRGNE*
Ga0116138_1000017102	3300009552	Peatland	MKVAGLLMMPAGWFIVLAALVLLKAYLMQNLFMSAGVGVEVLGLILFALSHVPSKGGKE*
Ga0116111_10460132	3300009616	Peatland	MKITGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLILFTRAHFVAKRGNE*
Ga0116122_10442352	3300009639	Peatland	MKITGLLMMPAGWFIVLAALVLLRATLARNVFIAAGLGVEILGLVLFTRSHLMAKGGNE*
Ga0116126_12023761	3300009640	Peatland	MKITGLLMMPAGWFIVLAALVLLRATLARNLFVTAGLGVEILGLVLFTRSHGVAQRGNE*
Ga0116223_102625551	3300009839	Peatlands Soil	MKITGLLMMPAGWFLVLAALVLLRAFVVQDLFIAAGIGVEILGLVLFTRAHWVAKGGNE*
Ga0074046_100340973	3300010339	Bog Forest Soil	MKITGLLMMPAGWFIVLAALVLLRTILAQNLFIAAGIGVEILGLVLFTRSHMAARRGNE*
Ga0074046_105440561	3300010339	Bog Forest Soil	MKITGLLMMPAGWFIVLAALVLLRQFLAQNLFIAAGMGVEILGLVLFTRSHIPTAKRGNE
Ga0074045_105276411	3300010341	Bog Forest Soil	MKLTGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLVLFTRAHLVAKRGNE*
Ga0074045_109382292	3300010341	Bog Forest Soil	MKITGLLMMPAGWIIVLAALVLLRAFLARNLFITAGLGVEILGLVLLTRSHLTAKRGNE*
Ga0074044_100099603	3300010343	Bog Forest Soil	MKITGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLVLFTRAHLVAKRGNE*
Ga0136449_1000312768	3300010379	Peatlands Soil	MKITGLLMMPAGWIIVLAALVLLRAILARNLFIGAGLGVEILGLVLLTRAHLTAKRGNE*
Ga0136449_1002414132	3300010379	Peatlands Soil	MKITGFLMMPAGWFLVLAALVLLRAFVAQNLFIAAGVGVEIMGLVLFTRAHLVPKRGHE*
Ga0136449_1004621062	3300010379	Peatlands Soil	VKITGLLMMPAGWFIVLAAVVLLRASLPESLFIAAGIGVEILGLVLFARSHMPAKGGNE*
Ga0136449_1007639781	3300010379	Peatlands Soil	MKITGLLMMPAGWFIVLAALVLLRVFLVQNLFIAAGLGVEILGLVLFARSHMVAKRGNE*
Ga0136449_1022407252	3300010379	Peatlands Soil	MKITGLLMMPAGWIIVLAALVLLPVSLVMNLFIAAGIGVEILGLVLFTRSHMISRKGA*
Ga0181539_100180812	3300014151	Bog	MKITGLLLMPAGWFIVLAALVLLRAFLAQDLFIAAGIGVEILGLVLFTRSHLMAKRGNE*
Ga0181527_12932342	3300014153	Bog	MKITGLLMMPAGWFLVLAALVLLRAFVMQDLFIAAGIGVEILGLVLFTRAHWVAKGGNE*
Ga0181524_101056712	3300014155	Bog	MKITGLLMMPAGWFLVLAALVLLRAFVAQNLFIAAGVGVEILGLVLFTRAHLIPKRGHE*
Ga0181530_103890461	3300014159	Bog	MKITGLLLMPAGWFIVLAALVLLRAFLAQDLFIAAGIGVEILGLVLFTRAHLA
Ga0181517_100182545	3300014160	Bog	MKVTGLLMMPSGWFIVLTALILLRGVVAQDLFVAAGAGVEILGLVLFTRSHLMVKRGHE*
Ga0181517_103762521	3300014160	Bog	MKITGLLMMPAGWFIVLAALVLLRAFLAQNLFIAAGIGVEILGLVLFTRSHL
Ga0181523_102133792	3300014165	Bog	MKIVGILMLPAGCFLVLAALVLLRAYAPRDLFVAAGIGVEVMGLVFFTRAHIVAKRGHE*
Ga0181531_103917061	3300014169	Bog	MKITGLLMMPAGWFLVLAALVLLRAFLAQSFFVAAGTGVEIMGLVLFARAHLSPIRGRE*
Ga0182010_102270092	3300014490	Fen	MKMTGFLMMPAGWFLVLAALVLLRAFVAQNLFIAAGVGVEIMGLVLFTRAHLVPKRGHE*
Ga0182016_101165822	3300014493	Bog	MKITGLLLMPAGWFIVLAALVLLRAFMGRELFIAAGIGVEILGLVLFTRAHLAANRGNE*
Ga0182016_104839222	3300014493	Bog	MGEIMKMTGFLMMPAGWFLVLAALVMLRTFVAQNLFIAAGVGVEIMGLVLFTRAHLVPKRGHE*
Ga0182017_109017572	3300014494	Fen	IMKMTGFLMMPAGWFLVLAALVLLRAFVAQNLFIAAGVGVEIMGLVLFTRAHLVPKRGHE
Ga0182011_102886812	3300014496	Fen	MMPAGWFLVLAALVLLRAFVARNLFIAAGMGVEIMGLVLFTRAHLVPKRGHE*
Ga0182012_100960592	3300014499	Bog	MKFIGLLMLPAGWFLVLAALVLLRTFVAQNVFVAAGLGVEIMGLVLFTRAHLVPKRGHK*
Ga0182021_112608182	3300014502	Fen	MKIIGLLMMPAGWFIVLAALVLLRTFLAQHLFIAAGIGVEMLGLVLFTRSHLAVKRGNE*
Ga0182021_125870811	3300014502	Fen	MKITGLLMMPAGWFLVLAALVLLRAFVAQDLFIAAGVGVEILGLVLFTRAHWMAKGGNE*
Ga0181516_104991561	3300014655	Bog	MKIIGILMLPAGCFLVLCAFVLLRAEVARDLFIAAGAGVEIMGLVLLTRAHLPAKRGRA*
Ga0182030_114190422	3300014838	Bog	MKITGLLMMPAGWFIVLAALVLLRAFLVQHLFVAAGVGVEILGLVLFTRSHLVAKRGNE*
Ga0182027_100248852	3300014839	Fen	MKVTGLLMMPSGWFIVLTALILLRGILAQDLFVAAGAGVEILGLVLFTRSNLMIKRGHE*
Ga0182027_100682663	3300014839	Fen	MKIPGLLLMPAGWFLVLTSLVLLRAFLAQNLFIAAGIGVEIMGLVLLTRSHLVAKRGND*
Ga0182027_105544352	3300014839	Fen	MKITGLLMMPAGWFLVLAALVLLRAFVAQDLFIAAGIGVEILGVVLFTRAHSVAKGGHE*
Ga0187856_10006915	3300017925	Peatland	MKITGLLMMPAGLFIVLAAVVLLRTFLAQNLFVAAGIGVEILGLVLFTRSHLMAKRGNE
Ga0187849_10763621	3300017929	Peatland	MKVAGLLMMPAGWFIVLAALVLLKAYLMQNLFMSAGVGVEVLGLILFALSHVPSKGGKE
Ga0187803_100619742	3300017934	Freshwater Sediment	MKITGLFLMPAGWFIVLAALVLLRTIPAQSSFVAAGMGVEILGLVLFIRAHLAPKRGNE
Ga0187848_101687861	3300017935	Peatland	MKLTGLLMMPAGWFIVLAALMLLRTVLMQNLFIAAGVGVEILGLVLLIRGHLTAKGGNA
Ga0187853_101274991	3300017940	Peatland	MKITGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLILFTRAHFVAKRGNE
Ga0187847_107365861	3300017948	Peatland	MKITGLLMMPAGWFLVLAALVLLRTYLAQNMFVAAGIGVEILGLVLFTRSHLGARRGDE
Ga0187783_100039288	3300017970	Tropical Peatland	MKITGLLMMPAGWFLVLAALVLLRTYVAQVSFIAAGIGVEILGLVLFTRAHWVAKGGSE
Ga0187783_110653922	3300017970	Tropical Peatland	MKLTGFLIMPAGWFIVLAALVLLRAYVAQNLFIAAGFGVEIMGLVLFTRAHRAAKGRNE
Ga0187781_100291743	3300017972	Tropical Peatland	MMPAGWFLVLAALVLLRTYVAQVSFIAAGIGVEILGLVLFTRAHWVAKGGSE
Ga0187781_101867752	3300017972	Tropical Peatland	MKITGLLMMPAGWFIVLTAVALLRAFLAQSLFIASGIGVEILGFVLFTRSHLAAKRGE
Ga0187781_103084002	3300017972	Tropical Peatland	MKITGLLMMPAGWFIVLAALVLLRAFVAQNLFIVAGIGVEILGLVLFMRSHLGADRGSE
Ga0187782_109613072	3300017975	Tropical Peatland	MKITGLLMMPAGWFIVLAALVLLRAFVAQNLFIVAGIGVEILGLVLFTRSHLGADRGSE
Ga0181520_101064263	3300017988	Bog	MKVTGLLMMPSGWFIVLTALILLRGVVAQDLFVAAGAGVEILGLVLFTRSHLMVKRGHE
Ga0181520_103372122	3300017988	Bog	MMPSGLFIILAAVVLLRTSLAQNWFVAAGIGVEILGLVLFTRSHLMTKRGNE
Ga0181520_106167052	3300017988	Bog	MKITGLLMMPAGWFIVLAALVLLRAFLAQNLFIAAGIGVEILGLVLFTRSHLVAKGGND
Ga0187891_11763342	3300017996	Peatland	VKITGLLMMPAGWVIVLAALALLHGLLPESLFIAAGGGVEILGLVLFARSHMPAKGGNE
Ga0187865_12234382	3300018004	Peatland	GWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLILFTRAHFVAKRGNE
Ga0187878_10494842	3300018005	Peatland	MKITGLLMMPAGWFIVLAALVLLRAFLAQNLFIAAGLGVEILGLVLFTRSHLGAKGGHE
Ga0187873_12910111	3300018013	Peatland	MKITGLLLMPAGWFIVLAALVLLRAFMGRELFIAAGIGVEILGLVLFTRSHLGAKGGHE
Ga0187860_12263662	3300018014	Peatland	GGGRMKITGLLMMPAGWFIVLAAWVLLRATLARNLFVTAGFGVEFLGLVLFTRAHLMAKGGNE
Ga0187880_14634551	3300018016	Peatland	MKITGLLMMPAGWIIVLAALVLLRPVLAQNMFIAAGIGVEILGLVLFTHAHLVAKRGNE
Ga0187872_103290891	3300018017	Peatland	MKVAGLLMLPAGWFIILSALALLHTFMAQHVFVAAGIGVEILGLVLFARSHL
Ga0187857_103203962	3300018026	Peatland	MKITGLLMMPAGWFIVLAALVLLRAFLAQNLFIAAGIGVEIMGLVLFTRAHLVAKRGNE
Ga0187863_101595002	3300018034	Peatland	MKITGFLLMPAGWFLGLAALVLLRTVVARDLFIAAGIGVEFLGLGLFTRAHWAAKGGNE
Ga0187875_101345642	3300018035	Peatland	MKITGLLLMPAGWFIVLAALVLLRAFMGRELFIAAGIGVEILGLVLFTRAHLAA
Ga0187855_100613743	3300018038	Peatland	MKITGLLMLPAGWLIVLAALVLLRPFLAQNLFVAAGIGVEILGLVLFTRSHLGARRGDE
Ga0187862_107593241	3300018040	Peatland	LMMPAGWFIVLAALALLRGLLPESLFIAAGCGVEILGLVLFARSHMPAKGGNE
Ga0187871_105591782	3300018042	Peatland	MKITGLLLMPAGWFIVLAALVLLRAFMGRELFIAAGIGVEILGLVLFTRAHLAANRGNE
Ga0187871_106623681	3300018042	Peatland	MPSGLFIILAAVVLLRTSLAQNWFVAAGIGVEILGLVLFTRSHLMTKRGN
Ga0187859_107567481	3300018047	Peatland	MKITGLLMMPAGWFIVLAALVLLHATLARNLFVTAALGVELLGLVLFTRAHIMAKGGNE
Ga0187784_105224782	3300018062	Tropical Peatland	MKITGLLMMPAGWFIVLAALVLLRAFVAQNLFIVAGIGVEILGLVLFTRSHLGANRGSE
Ga0187784_112055281	3300018062	Tropical Peatland	MKITGLLLMPAGWFIVLAALALLRTIPAQSSFVAAGLGVEILGLVLLIRSHLTPPRGNE
Ga0187772_104916232	3300018085	Tropical Peatland	MKITGLLLLPAGWFIVMAALVLLRAHLAQNLFIMAGLGVELLGFVLLTRSHLGTTRWNE
Ga0187772_108486542	3300018085	Tropical Peatland	MKITGLLLMPAGWFLVLAALVLLRAFTVQNMFVAAGMGVEILGLVLFTRSHLGARRGNE
Ga0187772_109795642	3300018085	Tropical Peatland	MKLTGFLMMPAGWFIVVAAVALLRLLSAQELFVGAGCGVEILGLVLIIRAHLGEKGASE
Ga0187771_103075412	3300018088	Tropical Peatland	MKITGLLMMPAGWFIVLAALVLLRAYLARNLFIAAGMGVEILGLVLLTRAHWDAKRGNE
Ga0187771_114904572	3300018088	Tropical Peatland	ITGLLMMPAGWFIVLAALVLLRAFVAQNLFIVAGIGVEILGLVLFTRSHLGANRGSE
Ga0187770_101919342	3300018090	Tropical Peatland	MKVAALAMMPAGWFIVLSALVMLKGGGTQGLFVVAGLGVEVLGLIIFGRSHLPSKGGQA
Ga0187770_117134411	3300018090	Tropical Peatland	MKITGLLMMPAGWVIALAALALLRAFPARYLFIGAGVGVEILGLVLLTRSHLTAKRGNE
Ga0187852_13000811	3300019082	Peatland	MKITGLLMMPAGWFIVLAALVLLRATLARNLFVTAGLGVEILGLVLFTRAHLMAKGGNE
Ga0187852_14470891	3300019082	Peatland	MKITGLLMMPAGWFIVLAALVLLRAFLAQNLFIAAGIGVEIMGLVLLTRSHLVAKRGND
Ga0224554_10697891	3300023068	Soil	RARGGKMKITGLLLMPAGWFLVLTSLVLLRAFLAQNLFIAAGIGVEIMGLVLLTRSHLVAKRGND
Ga0208034_10628051	3300025442	Peatland	MKITGLLMMPAGWFIVLAALVLLRAVLAQNLFIAAGLGVEILGLILFTRAHFVAKRG
Ga0208820_11100912	3300025576	Peatland	GRMKITGLLMMPAGLFIVLAAVVLLRTFLAQNLFVAAGIGVEILGLVLFTRSHLMAKRGN
Ga0209039_100024668	3300027825	Bog Forest Soil	MKITGFLLMPAGWFIVLAALVLLRAVPARNLFIAAGLGVEILGLVLFTRAHLPAKGGNE
Ga0209517_102670542	3300027854	Peatlands Soil	MKITGLLMMPAGWIIVLAALVLLRAILARNLFIGAGLGVEILGLVLLTRAHLTAKRGNE
Ga0209517_103098422	3300027854	Peatlands Soil	MKITGLLMMPAGWFLVLAALVLLRAFVMQDLFIAAGIGVEILGLVLFTRAHWVAKGGNE
Ga0209579_100243293	3300027869	Surface Soil	MKITGLLMLPAGWFLVLAALVLLRTFVAQSLFVAAGSGVEIMGLVLFARGHQTPKRGRK
Ga0209777_105278672	3300027896	Freshwater Lake Sediment	MKITGLLMLPAGWFIVLAALVLLRAFLAQNLFIAAGIGVEIMGLVLFTRAHWVAKRGNE
Ga0209415_104064402	3300027905	Peatlands Soil	VKITGLLMMPAGWFIVLAAVVLLRASLPESLFIAAGIGVEILGLVLFARSHMPAKGGNE
Ga0209415_104656271	3300027905	Peatlands Soil	MKITGLLMMPAGWFLVLAALVLLRAFVVQDLFIAAGIGVEILGLVLFTRAHWVAKGGNE
Ga0209698_112971622	3300027911	Watersheds	LMLPAGWFIVLTALVLLRTFLAQHLFVAAGIGVEVLGLVLFTRAHLTVSVPIIPA
Ga0311361_101365752	3300029911	Bog	MKFIGLLMLPAGWFLVLAALVLLRTFVAQNVFVAAGLGVEIMGLVLFTRAHLVPKRGHK
Ga0311359_101415602	3300029914	Bog	MLPAGWFLVLAALVLLRTFVAQNVFVAAGLGVEIMGLVLFTRAHLVPKRGHK
Ga0265760_102797312	3300031090	Soil	MKITGLLMMPAGWFLVLAALVLLRAFLAQSLFVAAGTGVEIMGLVLFARAHLSPKRGRE
Ga0302325_117509301	3300031234	Palsa	MKITGLLMLPAGWLIVLTALVLLRGFVAQNLFVAAGVGVEIMGLTLFARAHLLVGRGNE
Ga0310686_1027990672	3300031708	Soil	MKITGLLMMPAGWFLVLAALVLLRAFLAQSLFVAAGIGVEIMGLVLFARAHLSPKRGRE
Ga0302319_111866902	3300031788	Bog	MKFIGLLMMPAGWFLVLAALVLLRAFVAQSVFVAAGLGVEIMGLVLFTRAHLAPKRGHK
Ga0315282_100138489	3300032069	Sediment	MKITGLLMMPAGWFIVLSALVLLRAFLAQNLFIAAGIGVEILGLVLFTRSHWVAKRGNA
Ga0311301_107637111	3300032160	Peatlands Soil	MKITGFLMMPAGWFLVLAALVLLRAYVAQNLFIAAGVGVEIMGLVLFTRAHLVPKRGHE
Ga0311301_108865842	3300032160	Peatlands Soil	VKITGLLMMPAGWFIVLAAVVLLRALLPESLFIAAGIGVEILGLVLFARSHMPAKGGNE
Ga0335085_100054599	3300032770	Soil	MGMKITGLLLMPAGWFIELAALVLLRNFSVQCAFSAAGIGVEILGLVLLARSHRGARRES
Ga0335085_100126192	3300032770	Soil	MKITGLLLMPAGWFIVLAALVLLRAFLAQNMFIAAGLGVEILGLVLFTRSHLTAKRGNE
Ga0335085_122413582	3300032770	Soil	MKIIGFLLLPSGCFLVLAALILLRAYGARDLFVAAGMGVELMGLALVTRAQISVKRGRD
Ga0335085_123079021	3300032770	Soil	MKITGLLLMPAGWVIVLTALVLLRAIAVQNLFVLAGLGVEIMGLVLFTRAHAVTRRGNE
Ga0335079_103033652	3300032783	Soil	MKITGLLLMPSGWFIVLAALVLLRTIPALSAFVAAGMGVEILGLVLLIRSHLTPKGGNE
Ga0335079_108754632	3300032783	Soil	MMPAGLFIVLAAVALLCGNVTQNLFVAAGMGVEILGLFLVTRSHLPGKRRKE
Ga0335078_113521412	3300032805	Soil	MKITGLLLMPAGWMIVVTALVLLRTLVAQHLFVAAGVGVEILGLVLFTRSHLAPKRGKV
Ga0335078_115137771	3300032805	Soil	AGWIIVLAAVALLKANLALNVFVTAGCGVEILGLVLLTRSHLSQRRGLE
Ga0335078_118355471	3300032805	Soil	MKITGLLLMPAGWVIVLAALVLLRTDVARNVFILAGLGVEILGLVFLTRSHIGARGKN
Ga0335078_118603451	3300032805	Soil	MKITGLFLLPAGWIIVLAAVALLRGNLAQNVFVTAGGGVEILGLVLLTRSHLPHQRGME
Ga0335078_120799341	3300032805	Soil	AGWFIVLTALVLLRAFLAQNLFIAAGIGVEVLGFILFARSHLVARKGNE
Ga0335080_117733001	3300032828	Soil	MKVIGLLMMPAGWFIVLAALVLLRAVMAQNVFVVAGVGVEILGLVLFTRSHLTAKRGNE
Ga0335081_105299692	3300032892	Soil	MMPAGLVIVLAAVALLCGNVTQNLFVAAGMGVEILGLFLVTRSHLPGKRRKE
Ga0335081_111286372	3300032892	Soil	MKITGLLLMPSGWFIILAALVLLRTFFMQNLFIFAGIGVEILGLVLLTRGHLTVKGGNE
Ga0335081_114841031	3300032892	Soil	MKITGLLMMPAGWLIVLAAVVLLRTSLSLNLFIAAGVGVEILGLVLFTRSHLVVKRGNE
Ga0335081_126007992	3300032892	Soil	MKITGLLMMSAGWFIVLAALVLLRAIPAQELFIAAGAGVEILGLVLFTRSHLGAKRGNE
Ga0335069_108502282	3300032893	Soil	MKITGLLLMPAGWMIVVTALVLLRTLVAQQLFVAAGVGVEILGFVLFTRSHLAPKRGRS
Ga0335071_108852202	3300032897	Soil	MKITGLLMMPSGWFIVIAALVLLRAAVAQNLFVAAGVGIEILGLVLFTRSHLTSKRGNE
Ga0335077_109305982	3300033158	Soil	MLPAGWVIVLAALVLLRISIVQNIFVTAGLGVELVGLVLLTRAHLMFQGGNE
Ga0326728_1000035241	3300033402	Peat Soil	MKITGLLLMPAGWFIVLAALVLLRAVLAQNLFVAAGMGVEILGLVLFTRAHLVAKRGNE
Ga0326728_1000204946	3300033402	Peat Soil	MKITGLLMMPAGWFIVLAALVLLRSVRAQILFIAAGIGVEILGLVLFTRAHGLAKRGNE
Ga0326728_1000381931	3300033402	Peat Soil	MKITGLLMMPAGWFIVLAALVLLRATLARNIFVTAGLGVEILGLVLFTRAHLMAKGGNE
Ga0326728_1000566110	3300033402	Peat Soil	MKITGLLMMPAGWIIVLAALVLLRAVLARNLFIAAGLGVEILGLVLLTRSHLTAKRGNE
Ga0326728_1000913013	3300033402	Peat Soil	MKITGLLMMPAGWFIVLAALVLLRTFMAQHLFIAAGMGVEILGLVLFTRSHLAVKRGSE
Ga0326728_1001212317	3300033402	Peat Soil	GGRMKITGLLMMPAGWFIVLAALVLLRTILAQNLFIAAGIGVEILGLVLFTRSHMAARRGNE
Ga0326728_100125835	3300033402	Peat Soil	MKITGLLMMPAGWFIVLAALVLLRAALAQNLFIAAGLGVEILGLVLFTRAHLMAKGGNE
Ga0326728_1002913811	3300033402	Peat Soil	MKITGLLIMPAGWLIVLAAVVLLRAYLVQNLFIAAGIGVEIMGLVLLTRAHGTAKRGHE
Ga0326728_100809162	3300033402	Peat Soil	MKITGLLMMPAGWFIVLAALVLLRTILVQNLFIAAGIGVEILGLVLFTRSHMAARRGNE
Ga0326728_101284341	3300033402	Peat Soil	RMKITGLLMMPAGWFLVLAALVLLRAFVARDLFIAAGIGVEILGLVLFTRAHWVAKGGNE
Ga0326728_101697951	3300033402	Peat Soil	VKITGLLMMPAGWIIVLSALVLLRAFLALNLFIAAGLGVEILGLVLLTRSHLTAKRGNE
Ga0326728_103518671	3300033402	Peat Soil	MKITGLLIMPAGWFIVLAAVVLLRALLVQNLFIAAGIGVEILGLALLTRSHLTAKRGNE
Ga0326728_103636892	3300033402	Peat Soil	MKVAGLLMLAAGWFIILSALALLHTFMAQHVFVAAGIGVEILGLVLLARSHLTAKGGTQ
Ga0326728_103836702	3300033402	Peat Soil	MKITGLLLMPAGWFIVLAALVLLRAFLAQNLFVAAGIGVEILGLILFTRSHLGANRRTE
Ga0326728_105315263	3300033402	Peat Soil	MKITGFLLMPAGWFIVLTALVLLRTVAAQSLFIAAGSGVEILGLVMFTRAHAAAKRGTE
Ga0326728_105875972	3300033402	Peat Soil	MKITGFLIMPAGWFIVLAALVLLRAYVARNLFIAAGFGVEIMGLVLFTRAHWAAKGRNE
Ga0326728_106342931	3300033402	Peat Soil	MKLTGLLMMPAGWFIVLAALVLLRTSLAQNLFIGAGIGVEILGLVLFTRSHLAAKRGNE
Ga0326728_107262501	3300033402	Peat Soil	MKITGLLMMPAGWFLVLAALVLLRAFVMQDLFIASGIGVEILGLVLFTRAHWVAKGGNE
Ga0326727_104823211	3300033405	Peat Soil	MKITGLLLMPAGLFIVLSAVVMLRAFVAESLFVAAGMGVEVLGLILFARSHRLAKGGSE
Ga0326727_108833142	3300033405	Peat Soil	MMPAGWFIVLAALVLLRTILVQNLFIAAGIGVEILGLVLFTRSHMAARRGNE
Ga0326727_110641531	3300033405	Peat Soil	SGGKMKITGLLLMPAGWMIVLAALLLLRAFVAQHLFVAAGVGVEILGLVLFTRSHLAPKRGRV
Ga0314861_0001203_25081_25260	3300033977	Peatland	MKVAGLLMMPAGWFIVLTALVLLKAYVVQNLFISAGIGVEVLGLILFTLSHMPSKGGNE
Ga0314861_0030059_1835_2014	3300033977	Peatland	MKITGLLMLPAGGFLVLASMVLLRTFMIQSLFVTAGVGVEILGLNLLARAHLPARRGNE
Ga0314861_0124898_129_308	3300033977	Peatland	MKVAALAMMPAGWFIVLSALVMLKGGGTQGLFVVAGLGVEVLGLIIFVRSHLPSKGGQA
Ga0314861_0146591_769_948	3300033977	Peatland	MKITGLLMMPAGWFIVLTALVLLRAFLAQRLFIAAGVGVEIMGLVLLTRAHLVAKRGNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050087

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences