Metagenome Family F050261

Basic Information
Family ID	F050261
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	42 residues
Representative Sequence	AMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIVSDE
Number of Associated Samples	125
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.21 %
% of genes near scaffold ends (potentially truncated)	92.41 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Bacteria (99.310 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.931 % of family members)
Environment Ontology (ENVO)	Unclassified (23.448 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.897 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.41% β-sheet: 2.94% Coil/Unstructured: 92.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF01266	DAO	62.76
PF08352	oligo_HPY	6.21
PF04392	ABC_sub_bind	2.76
PF00496	SBP_bac_5	2.07
PF13229	Beta_helix	1.38
PF00497	SBP_bac_3	0.69
PF00534	Glycos_transf_1	0.69
PF00583	Acetyltransf_1	0.69
PF05598	DUF772	0.69
PF13660	DUF4147	0.69
PF03060	NMO	0.69
PF07992	Pyr_redox_2	0.69
PF02615	Ldh_2	0.69
PF04324	Fer2_BFD	0.69
PF01494	FAD_binding_3	0.69
PF09335	SNARE_assoc	0.69
PF00528	BPD_transp_1	0.69
PF13649	Methyltransf_25	0.69
PF08240	ADH_N	0.69
PF13419	HAD_2	0.69
PF02515	CoA_transf_3	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.76
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.38
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.69
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.69
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.69
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.69
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.69
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.69
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.69
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.31 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.31 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.31 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	61.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	61.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	61.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.07 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	55.17 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.17 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.69 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.69 %
Unclassified	root	N/A	0.69 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.17 %
Paraburkholderia oxyphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	0.69 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.69 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.69 %
Unclassified	root	N/A	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101430445	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300002908\|JGI25382J43887_10169330	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300004463\|Ga0063356_105377985	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005174\|Ga0066680_10490180	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005178\|Ga0066688_10185585	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005295\|Ga0065707_10024869	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300005330\|Ga0070690_100651688	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005332\|Ga0066388_101084723	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300005445\|Ga0070708_100263383	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300005447\|Ga0066689_10146098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1403	Open in IMG/M
3300005447\|Ga0066689_10778642	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005459\|Ga0068867_101954966	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005471\|Ga0070698_100311678	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005547\|Ga0070693_101603653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	511	Open in IMG/M
3300005552\|Ga0066701_10621898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300005556\|Ga0066707_10514497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300005558\|Ga0066698_10000840	All Organisms → cellular organisms → Bacteria → Proteobacteria	12513	Open in IMG/M
3300005558\|Ga0066698_11094510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300005559\|Ga0066700_10598206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	769	Open in IMG/M
3300005576\|Ga0066708_10758415	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005598\|Ga0066706_11052521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300005713\|Ga0066905_101055270	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005764\|Ga0066903_102417339	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300005764\|Ga0066903_103913664	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006032\|Ga0066696_10674795	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006034\|Ga0066656_10354908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	947	Open in IMG/M
3300006049\|Ga0075417_10111102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1251	Open in IMG/M
3300006796\|Ga0066665_10084604	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300006844\|Ga0075428_100007972	All Organisms → cellular organisms → Bacteria	11748	Open in IMG/M
3300006844\|Ga0075428_100589278	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300006846\|Ga0075430_100280928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1377	Open in IMG/M
3300006847\|Ga0075431_101290764	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300006852\|Ga0075433_10414689	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300006852\|Ga0075433_11960472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300006854\|Ga0075425_100132844	All Organisms → cellular organisms → Bacteria	2846	Open in IMG/M
3300006854\|Ga0075425_101006753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	951	Open in IMG/M
3300006871\|Ga0075434_100016829	All Organisms → cellular organisms → Bacteria → Proteobacteria	7034	Open in IMG/M
3300006880\|Ga0075429_100251094	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300006903\|Ga0075426_10403727	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300006904\|Ga0075424_102625235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300006914\|Ga0075436_100630549	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006914\|Ga0075436_101087877	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006954\|Ga0079219_11057376	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300007076\|Ga0075435_101543011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300009012\|Ga0066710_100286472	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300009012\|Ga0066710_100604509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1664	Open in IMG/M
3300009089\|Ga0099828_10549444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1041	Open in IMG/M
3300009090\|Ga0099827_10089555	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300009137\|Ga0066709_100101799	All Organisms → cellular organisms → Bacteria	3522	Open in IMG/M
3300009147\|Ga0114129_10470448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1646	Open in IMG/M
3300009148\|Ga0105243_11857434	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300009177\|Ga0105248_10616361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1224	Open in IMG/M
3300009553\|Ga0105249_11688746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300009792\|Ga0126374_10126031	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300009792\|Ga0126374_10438420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	924	Open in IMG/M
3300009792\|Ga0126374_11380958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300010046\|Ga0126384_10206653	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1558	Open in IMG/M
3300010046\|Ga0126384_10816988	Not Available	836	Open in IMG/M
3300010047\|Ga0126382_11997278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300010303\|Ga0134082_10009497	All Organisms → cellular organisms → Bacteria	3495	Open in IMG/M
3300010336\|Ga0134071_10504493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300010358\|Ga0126370_11298576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
3300010358\|Ga0126370_12366900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300010359\|Ga0126376_10671746	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300010359\|Ga0126376_11952162	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010360\|Ga0126372_11417812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300010362\|Ga0126377_10227381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1803	Open in IMG/M
3300010366\|Ga0126379_12734416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300010376\|Ga0126381_101816640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300010398\|Ga0126383_10139877	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300010399\|Ga0134127_11972367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	661	Open in IMG/M
3300010399\|Ga0134127_12079041	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	646	Open in IMG/M
3300010401\|Ga0134121_11022860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	813	Open in IMG/M
3300010403\|Ga0134123_11690028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300012199\|Ga0137383_10322231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300012200\|Ga0137382_10691530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300012203\|Ga0137399_10457565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1068	Open in IMG/M
3300012208\|Ga0137376_10412128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1173	Open in IMG/M
3300012210\|Ga0137378_11491908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300012582\|Ga0137358_10653005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300012930\|Ga0137407_10544723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1086	Open in IMG/M
3300012944\|Ga0137410_10145714	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1799	Open in IMG/M
3300012944\|Ga0137410_11669536	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	560	Open in IMG/M
3300012948\|Ga0126375_11107418	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300014154\|Ga0134075_10001938	All Organisms → cellular organisms → Bacteria → Proteobacteria	7235	Open in IMG/M
3300014166\|Ga0134079_10054113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1421	Open in IMG/M
3300015053\|Ga0137405_1211686	All Organisms → cellular organisms → Bacteria	3099	Open in IMG/M
3300015371\|Ga0132258_11076928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2032	Open in IMG/M
3300015371\|Ga0132258_12627830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1257	Open in IMG/M
3300015374\|Ga0132255_100808529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1398	Open in IMG/M
3300016319\|Ga0182033_11124517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300016445\|Ga0182038_10833523	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300018061\|Ga0184619_10288753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300018429\|Ga0190272_12085709	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300020170\|Ga0179594_10140249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	890	Open in IMG/M
3300020170\|Ga0179594_10150909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	859	Open in IMG/M
3300021560\|Ga0126371_10925779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300025899\|Ga0207642_10341699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	880	Open in IMG/M
3300025922\|Ga0207646_10963445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300025922\|Ga0207646_11848945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300025930\|Ga0207701_11697104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300025931\|Ga0207644_11657939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300025935\|Ga0207709_11188499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300025941\|Ga0207711_10052720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3487	Open in IMG/M
3300026095\|Ga0207676_12388996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300026309\|Ga0209055_1061104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1594	Open in IMG/M
3300026315\|Ga0209686_1006936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4881	Open in IMG/M
3300026323\|Ga0209472_1266958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300026324\|Ga0209470_1334067	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300026332\|Ga0209803_1071356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1472	Open in IMG/M
3300026334\|Ga0209377_1237155	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300026342\|Ga0209057_1195015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300026529\|Ga0209806_1031473	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300026530\|Ga0209807_1245269	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300026548\|Ga0209161_10408729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300026552\|Ga0209577_10632918	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300027654\|Ga0209799_1059717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	855	Open in IMG/M
3300027655\|Ga0209388_1061304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1085	Open in IMG/M
3300027748\|Ga0209689_1248543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300027748\|Ga0209689_1345342	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300027862\|Ga0209701_10025634	All Organisms → cellular organisms → Bacteria	3833	Open in IMG/M
3300027873\|Ga0209814_10019853	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300028711\|Ga0307293_10230988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300028791\|Ga0307290_10385392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300028807\|Ga0307305_10409458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300031544\|Ga0318534_10675955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	584	Open in IMG/M
3300031561\|Ga0318528_10044351	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300031681\|Ga0318572_10572906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300031720\|Ga0307469_10528555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300031724\|Ga0318500_10695075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300031751\|Ga0318494_10536539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300031771\|Ga0318546_10227762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1279	Open in IMG/M
3300031793\|Ga0318548_10323177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300031819\|Ga0318568_10655568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300031831\|Ga0318564_10068861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1557	Open in IMG/M
3300031835\|Ga0318517_10135201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1097	Open in IMG/M
3300031860\|Ga0318495_10006194	All Organisms → cellular organisms → Bacteria	4766	Open in IMG/M
3300031945\|Ga0310913_10259500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1222	Open in IMG/M
3300032044\|Ga0318558_10133573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1185	Open in IMG/M
3300032067\|Ga0318524_10125800	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300032068\|Ga0318553_10165270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1149	Open in IMG/M
3300032091\|Ga0318577_10074773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1558	Open in IMG/M
3300032174\|Ga0307470_10773932	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300032180\|Ga0307471_103696818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300032180\|Ga0307471_103963986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.62%
Host-Associated	Host-Associated	21.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.93%
Plants	Host-Associated → Plants	21.38%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.83%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.86%
Loam	Environmental → Terrestrial → Soil → Loam	8.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.07%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1014304453	3300000559	Soil	WVSWFGIPTQFSPHWEAGMAIDEPTAHTRLIMSDE*
JGI25382J43887_101693302	3300002908	Grasslands Soil	LWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSEE*
Ga0063356_1053779851	3300004463	Arabidopsis Thaliana Rhizosphere	AAMREDWVSWFGIPTQFSPHWTAGMVVDEPTAHARLIVSEE*
Ga0066680_104901801	3300005174	Soil	VLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILSDE*
Ga0066688_101855852	3300005178	Soil	DEPPAMRGDWVSWFGIPTQFSPHWEAGMVIDEPTAHGRLILSDE*
Ga0065707_100248691	3300005295	Switchgrass Rhizosphere	PAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE*
Ga0070690_1006516881	3300005330	Switchgrass Rhizosphere	PADEPPAMREDWVSWFGIATQFSPHWEGPPIDEPTYHTRLVGE*
Ga0066388_1010847232	3300005332	Tropical Forest Soil	PLPLNVLWPADEPPAMREHWVGWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0070708_1002633831	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EPPAMRGDWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE*
Ga0066689_101460982	3300005447	Soil	MRGDWVSWFGIPTQFSPHWEAGMAMDEPTAHGRLIMSDE*
Ga0066689_107786422	3300005447	Soil	DEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE*
Ga0068867_1019549661	3300005459	Miscanthus Rhizosphere	PLNVLWPTDEPPAMREHWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE*
Ga0070698_1003116782	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILRDE*
Ga0070693_1016036531	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE*
Ga0066701_106218982	3300005552	Soil	REEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE*
Ga0066707_105144971	3300005556	Soil	MREDWVSWFGIPTQFSPHWTAGMAVDEPTAHARLILSEE*
Ga0066698_1000084015	3300005558	Soil	AAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIVSE*
Ga0066698_110945102	3300005558	Soil	WVSWFGIPTQFSPHWEAGMAVAEPTAQAPLILSDE*
Ga0066700_105982061	3300005559	Soil	DEPAAMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0066708_107584152	3300005576	Soil	NVLWPADEPAAMREDWVSWFGIPTQFSPHWTAGMAVDEPTAHARLILSEE*
Ga0066706_110525212	3300005598	Soil	MRGDWVSWFGIPTQFSPHWEAGMAVDEPTAHGRLIMSDE*
Ga0066905_1010552702	3300005713	Tropical Forest Soil	ADEPPAMREHWVGWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0066903_1024173391	3300005764	Tropical Forest Soil	AMREDWVSWFGIPTQFSPHWDGAPIDEPTAHARLVGE*
Ga0066903_1039136643	3300005764	Tropical Forest Soil	EEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIMSDE*
Ga0066696_106747951	3300006032	Soil	SVLWPGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE*
Ga0066656_103549082	3300006034	Soil	WVSWFGIPTQFSPHWTAGMAMDEPTAHTRLILSDE*
Ga0075417_101111021	3300006049	Populus Rhizosphere	EDWVSWFGIPTQFSPHWEAGMAADEPTAQARFIRER*
Ga0066665_100846043	3300006796	Soil	EDRVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE*
Ga0075428_10000797216	3300006844	Populus Rhizosphere	WVSWFGIPTQFSPHWEAGMAADEPTAQARFIRER*
Ga0075428_1005892781	3300006844	Populus Rhizosphere	ADEPAAMREDWVSWFGIPTQFSPHWTAGMALDEPTAHARLIMSDE*
Ga0075430_1002809281	3300006846	Populus Rhizosphere	DWVSWFGIPTQFSPHWEPGMVLDEPTAHARLIVSDE*
Ga0075431_1012907642	3300006847	Populus Rhizosphere	PADEPAAMREDWVSWFGIPTQFSPHWTAGMALDEPTAHARLIMSDE*
Ga0075433_104146892	3300006852	Populus Rhizosphere	MREEWVSWFGIPTQFSPHWTAGMAVDEPTAHTRLISE*
Ga0075433_119604722	3300006852	Populus Rhizosphere	DWVSWFGIPTQFSPHWEAGMVGDEPTARARFITHEE*
Ga0075425_1001328441	3300006854	Populus Rhizosphere	DEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLISE*
Ga0075425_1010067531	3300006854	Populus Rhizosphere	MREHWVSWFGIPTQFSPHWEPGMVLDEPTAHTRLILSDE*
Ga0075434_1000168296	3300006871	Populus Rhizosphere	VLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAVDEPTAHTRLISE*
Ga0075429_1002510943	3300006880	Populus Rhizosphere	NVLWPADEPAAMREDWVSWFGIPTQFSPHWTAGMALDEPTAHARLIMSDE*
Ga0075426_104037271	3300006903	Populus Rhizosphere	DEPAAMREEWVSWFGIPTQFSPHWTAGMAVDEPTAHTRLISE*
Ga0075424_1026252351	3300006904	Populus Rhizosphere	EDWVSWFGIPTQFSPHWEAGMAIDEPTAHARLIVSDE*
Ga0075436_1006305491	3300006914	Populus Rhizosphere	AMREDWVSWFGIPTQFSPHWDGPPIDEPTYHTRLVGE*
Ga0075436_1010878771	3300006914	Populus Rhizosphere	LWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAVDEPTAHTRLISE*
Ga0079219_110573761	3300006954	Agricultural Soil	MREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIGE*
Ga0075435_1015430112	3300007076	Populus Rhizosphere	REQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0066710_1002864721	3300009012	Grasslands Soil	DEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE
Ga0066710_1006045091	3300009012	Grasslands Soil	NVLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILSDE
Ga0099828_105494441	3300009089	Vadose Zone Soil	WVSWFGIPTQFSPHWEAGMAIDEPTARARLIVSDE*
Ga0099827_100895555	3300009090	Vadose Zone Soil	VLWPGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAVDEPTAHGRLILSDE*
Ga0066709_1001017991	3300009137	Grasslands Soil	NVLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILSDE*
Ga0114129_104704482	3300009147	Populus Rhizosphere	WVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0105243_118574342	3300009148	Miscanthus Rhizosphere	EHWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE*
Ga0105248_106163614	3300009177	Switchgrass Rhizosphere	NVLWPTDEPPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE*
Ga0105249_116887462	3300009553	Switchgrass Rhizosphere	MREEWVSWYGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE*
Ga0126374_101260313	3300009792	Tropical Forest Soil	WVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIMSDE*
Ga0126374_104384201	3300009792	Tropical Forest Soil	DELPAMREEWVGWFGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE*
Ga0126374_113809582	3300009792	Tropical Forest Soil	HDELPAMREEWVSWYGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE*
Ga0126384_102066531	3300010046	Tropical Forest Soil	AAMREEWVSWFGIPAQFSPHWTAGMAIDEPTAHTRLIMSDE*
Ga0126384_108169881	3300010046	Tropical Forest Soil	PLPLNVLWPHDELPAMREEWVSWYGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE*
Ga0126382_119972782	3300010047	Tropical Forest Soil	AMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIVSDE*
Ga0134082_100094976	3300010303	Grasslands Soil	MREDWVSWFGIPTQFSPHWEAGMAIDEPTARGRLIVSEE*
Ga0134071_105044932	3300010336	Grasslands Soil	LNVLWPADEPPAMREHWVSWFGIPTQFSPHWEAGMAVAEPTAQAPLILSDE*
Ga0126370_112985761	3300010358	Tropical Forest Soil	PQDEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLIRSDE*
Ga0126370_123669001	3300010358	Tropical Forest Soil	EEWVGWFGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE*
Ga0126376_106717462	3300010359	Tropical Forest Soil	MREEWVSWYGIPTQFSPHWEAGMAIAEPTAQTRLIVSDE*
Ga0126376_119521621	3300010359	Tropical Forest Soil	MREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE*
Ga0126372_114178122	3300010360	Tropical Forest Soil	PPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0126377_102273812	3300010362	Tropical Forest Soil	MREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0126379_127344161	3300010366	Tropical Forest Soil	LNVLWPADEPPAMREHWVGWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0126381_1018166401	3300010376	Tropical Forest Soil	PADEPPAMREHWVGWFGIPTQFSPHWEAGMAIAEPTAQTPLIPSDE*
Ga0126383_101398771	3300010398	Tropical Forest Soil	MREEWVSWFGIPTQFSPHWTVGMAIDEPTAHARLIGE*
Ga0134127_119723672	3300010399	Terrestrial Soil	PADEPSAMREDWVSWFGIPTQFSPHWEGPPIDEPTYHTRLVGE*
Ga0134127_120790411	3300010399	Terrestrial Soil	APADEPTAMREDWVSWFGIPTQFSPHYDGPPIDEPTYHTRLVGE*
Ga0134121_110228602	3300010401	Terrestrial Soil	IREDWVSWFGIPTQFSPHWDGAPLVEPTAHTRLIVSDE*
Ga0134123_116900281	3300010403	Terrestrial Soil	TDEPPAMREQWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE*
Ga0137383_103222312	3300012199	Vadose Zone Soil	WVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE*
Ga0137382_106915302	3300012200	Vadose Zone Soil	PGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE*
Ga0137399_104575651	3300012203	Vadose Zone Soil	AMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRIILSDE*
Ga0137376_104121282	3300012208	Vadose Zone Soil	WPADEPAAMREEWVSWFGIPTQFSPHWTAGIAIDEPTAHARLIMSDE*
Ga0137378_114919081	3300012210	Vadose Zone Soil	AMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE*
Ga0137358_106530052	3300012582	Vadose Zone Soil	MREHWVSWFGIPTQFSPHWEAGMAIDEPTARARLIVSDE*
Ga0137407_105447231	3300012930	Vadose Zone Soil	EEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMNDE*
Ga0137410_101457143	3300012944	Vadose Zone Soil	WVSWFGIPTQFSPHWTAGMAIDEPTAHVRLIMSDE*
Ga0137410_116695361	3300012944	Vadose Zone Soil	VLAPADESAAIREDWVSWFGIPTQFSPHWDGAPIDEPTAHTRLIVSDE*
Ga0126375_111074181	3300012948	Tropical Forest Soil	AAMREHWVGWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE*
Ga0134075_100019388	3300014154	Grasslands Soil	LSVLWPGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAMDEPTAHGRLIMSDE*
Ga0134079_100541132	3300014166	Grasslands Soil	DWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE*
Ga0137405_12116863	3300015053	Vadose Zone Soil	WPVDEPPAMREHWVSWFGIPTQFSPHWEAGMAVAEPTAQAPFILSDE*
Ga0132258_110769284	3300015371	Arabidopsis Rhizosphere	NVLWPTDELPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDSDPAGY*
Ga0132258_126278302	3300015371	Arabidopsis Rhizosphere	TDEPSAMRVDWVGWFGIPTQFSPHWEPGMVLDEPTAHARLIMSDE*
Ga0132255_1008085291	3300015374	Arabidopsis Rhizosphere	VLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIMSDE*
Ga0182033_111245171	3300016319	Soil	NVLWPADEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0182038_108335232	3300016445	Soil	NVLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0184619_102887532	3300018061	Groundwater Sediment	EWVSWFGIPTQFSPHWEAGMAIDEPTARARLIVSDE
Ga0190272_120857092	3300018429	Soil	MREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0179594_101402492	3300020170	Vadose Zone Soil	WPGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE
Ga0179594_101509091	3300020170	Vadose Zone Soil	DEPAAMREDWVSWFGIPTQFSPHWTAGMAMDEPTAHTRLILSDE
Ga0126371_109257791	3300021560	Tropical Forest Soil	EDELPAMREEWVSWFGIPTQFSPHWAAGMAIAEPTAQTRLIVSDE
Ga0207642_103416992	3300025899	Miscanthus Rhizosphere	PAMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0207646_109634452	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ENWVSWFGISTQFSPHWEVGMAIAEPTAETRLILSDE
Ga0207646_118489451	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0207701_116971042	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DEPTAMREDWVSWFGIATQFSPHWEGPPVDEPTYHTRLVGE
Ga0207644_116579391	3300025931	Switchgrass Rhizosphere	MREHWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE
Ga0207709_111884992	3300025935	Miscanthus Rhizosphere	EHWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE
Ga0207711_100527203	3300025941	Switchgrass Rhizosphere	NVLWPADEPPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDSDPAGY
Ga0207676_123889961	3300026095	Switchgrass Rhizosphere	ELPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0209055_10611041	3300026309	Soil	AAMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0209686_10069367	3300026315	Soil	DEPAAMREDWVSWFGIPTQFSPHWTAGMAVDEPTAHARLILSEE
Ga0209472_12669582	3300026323	Soil	PAAMREDWVSWFGIPTQFSPHWTAGMAVDEPTAHARLILSEE
Ga0209470_13340672	3300026324	Soil	EEWVGWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE
Ga0209803_10713562	3300026332	Soil	PLSVLWPGDEPPAMRGDWVSWFGIPTQFSPHWEAGMAMDEPTAHGRLIMSDE
Ga0209377_12371552	3300026334	Soil	DWVSWFGIPTQFSPHWEAGMAIAEPTAQSRLILSDE
Ga0209057_11950152	3300026342	Soil	VLWPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIVSE
Ga0209806_10314731	3300026529	Soil	DEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILSDE
Ga0209807_12452692	3300026530	Soil	PAAMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0209161_104087292	3300026548	Soil	MREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE
Ga0209577_106329181	3300026552	Soil	LLWLGDEPTAVREDWVSWFGIPTQFSPHWDGAPLDEPTAHTRLVGE
Ga0209799_10597173	3300027654	Tropical Forest Soil	AAMREEWVSWFGIPAQFSPHWTAGMAIDEPTAHTRLIMSDE
Ga0209388_10613041	3300027655	Vadose Zone Soil	SVLWPADEPPAMRGDWVSWFGIPTQFSPHWEAGMAIDEPTAHGRLILSDE
Ga0209689_12485432	3300027748	Soil	PAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLILSDE
Ga0209689_13453422	3300027748	Soil	PAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIMSDE
Ga0209701_100256346	3300027862	Vadose Zone Soil	TAMREDWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0209814_100198533	3300027873	Populus Rhizosphere	DWVSWFGIPTQFSPHWEPGMVLDEPTAHTRLIVSDE
Ga0307293_102309882	3300028711	Soil	ADEPAAMREEWVSWFGIPTQFSPHWEAGMAIDEPTAHARLIVSDE
Ga0307290_103853922	3300028791	Soil	REEWVSWFGIPTQFSPHWEAGMAIDEPTAHARLIVSDE
Ga0307305_104094581	3300028807	Soil	MREEWVSWFGIPTQFSPHWEAGMAIDEPTAHARLIVSDE
Ga0318534_106759551	3300031544	Soil	MREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0318528_100443513	3300031561	Soil	WPADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0318572_105729061	3300031681	Soil	REEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0307469_105285552	3300031720	Hardwood Forest Soil	PADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHTRLIE
Ga0318500_106950752	3300031724	Soil	GDEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0318494_105365391	3300031751	Soil	PYDELPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLIVSDE
Ga0318546_102277621	3300031771	Soil	LNVLWPADEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318548_103231772	3300031793	Soil	VLWPADEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318568_106555682	3300031819	Soil	PAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLIVSDE
Ga0318564_100688611	3300031831	Soil	AAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0318517_101352012	3300031835	Soil	PLNVLWPADEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318495_100061946	3300031860	Soil	PAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0310913_102595002	3300031945	Soil	DEPPAMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318558_101335732	3300032044	Soil	AMREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318524_101258002	3300032067	Soil	MREQWVSWFGIPTQFSPHWEAGMAIAEPTAQTPLILSDE
Ga0318553_101652702	3300032068	Soil	ADEPAAMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0318577_100747733	3300032091	Soil	AMREEWVSWFGIPTQFSPHWTAGMAIDEPTAHARLIGE
Ga0307470_107739322	3300032174	Hardwood Forest Soil	PTDEPPAMREHWVSWFGIPTQFSPHWEAGMAVAEPTAQTPLILSDE
Ga0307471_1036968181	3300032180	Hardwood Forest Soil	DEPPAMREEWVSWFGIPTQFSPHWEAGMAIAEPTAQTRLILSDE
Ga0307471_1039639861	3300032180	Hardwood Forest Soil	AMREVWVSWFGIPTQFSPLWEAGMAIAEPTAETRLIMSDE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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