Metagenome / Metatranscriptome Family F050272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050272
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	58 residues
Representative Sequence	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP
Number of Associated Samples	97
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	84.14 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (44.138 % of family members)
Environment Ontology (ENVO)	Unclassified (76.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.53% β-sheet: 0.00% Coil/Unstructured: 60.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF05685	Uma2	14.48
PF00069	Pkinase	8.28
PF00581	Rhodanese	6.21
PF00127	Copper-bind	5.52
PF00248	Aldo_ket_red	5.52
PF03928	HbpS-like	4.14
PF01047	MarR	4.14
PF00196	GerE	3.45
PF04185	Phosphoesterase	3.45
PF07676	PD40	2.76
PF13437	HlyD_3	1.38
PF09948	DUF2182	1.38
PF04011	LemA	0.69
PF04030	ALO	0.69
PF00873	ACR_tran	0.69
PF08281	Sigma70_r4_2	0.69
PF00282	Pyridoxal_deC	0.69
PF01713	Smr	0.69
PF04542	Sigma70_r2	0.69
PF13360	PQQ_2	0.69
PF06537	DHOR	0.69
PF12706	Lactamase_B_2	0.69
PF00580	UvrD-helicase	0.69
PF13463	HTH_27	0.69
PF13560	HTH_31	0.69
PF03704	BTAD	0.69
PF12840	HTH_20	0.69
PF06452	CBM9_1	0.69
PF01510	Amidase_2	0.69
PF07593	UnbV_ASPIC	0.69
PF11074	DUF2779	0.69
PF10518	TAT_signal	0.69
PF06772	LtrA	0.69
PF07732	Cu-oxidase_3	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	33.10
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	14.48
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	3.45
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.69
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.69
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.69
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.69
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.69
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.69
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.69
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	24.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.76 %
Unclassified	root	N/A	1.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.76 %
Unclassified	root	N/A	1.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.69 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.69 %
Desulfobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
unclassified Zavarzinella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella	0.69 %
Desulfobacter curvatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter curvatus	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.76 %
Unclassified	root	N/A	1.38 %
Zavarzinella sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	0.69 %
Desulfobacter curvatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter curvatus	0.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10052603	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300002909\|JGI25388J43891_1074904	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005166\|Ga0066674_10026573	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300005166\|Ga0066674_10361195	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005171\|Ga0066677_10024748	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300005172\|Ga0066683_10150202	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005172\|Ga0066683_10482871	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005172\|Ga0066683_10539928	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005174\|Ga0066680_10514823	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005175\|Ga0066673_10015754	All Organisms → cellular organisms → Bacteria	3372	Open in IMG/M
3300005176\|Ga0066679_10538326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	761	Open in IMG/M
3300005177\|Ga0066690_10352586	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300005177\|Ga0066690_10753545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	638	Open in IMG/M
3300005177\|Ga0066690_10787266	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005177\|Ga0066690_10930291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter curvatus	552	Open in IMG/M
3300005179\|Ga0066684_10016027	All Organisms → cellular organisms → Bacteria	3784	Open in IMG/M
3300005180\|Ga0066685_10316556	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300005180\|Ga0066685_10498127	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300005180\|Ga0066685_10575691	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005184\|Ga0066671_10185364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300005186\|Ga0066676_11108176	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005187\|Ga0066675_10031423	All Organisms → cellular organisms → Bacteria	3118	Open in IMG/M
3300005445\|Ga0070708_100860304	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005447\|Ga0066689_10316024	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005447\|Ga0066689_10602742	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005450\|Ga0066682_10555934	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005467\|Ga0070706_101467919	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005552\|Ga0066701_10977425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300005553\|Ga0066695_10512558	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005553\|Ga0066695_10722633	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005556\|Ga0066707_10016845	All Organisms → cellular organisms → Bacteria → Proteobacteria	3784	Open in IMG/M
3300005560\|Ga0066670_10037774	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300005566\|Ga0066693_10120485	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300005568\|Ga0066703_10695007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300005569\|Ga0066705_10183444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1302	Open in IMG/M
3300005574\|Ga0066694_10104979	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005574\|Ga0066694_10383571	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300006034\|Ga0066656_10600248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300006046\|Ga0066652_100051021	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300006046\|Ga0066652_100408989	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300006794\|Ga0066658_10098585	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300006796\|Ga0066665_10777978	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300006796\|Ga0066665_10868315	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300006796\|Ga0066665_10962475	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006797\|Ga0066659_10222833	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300006797\|Ga0066659_11199203	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006797\|Ga0066659_11268408	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006852\|Ga0075433_11628174	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006854\|Ga0075425_102995856	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	516	Open in IMG/M
3300006903\|Ga0075426_11505483	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006914\|Ga0075436_100067687	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300006914\|Ga0075436_100348780	Not Available	1066	Open in IMG/M
3300009012\|Ga0066710_102500681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	746	Open in IMG/M
3300009012\|Ga0066710_103950812	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009012\|Ga0066710_104316143	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300009090\|Ga0099827_10017504	All Organisms → cellular organisms → Bacteria	4879	Open in IMG/M
3300009090\|Ga0099827_11333822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	624	Open in IMG/M
3300009090\|Ga0099827_11676391	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009137\|Ga0066709_100638522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1522	Open in IMG/M
3300009137\|Ga0066709_101477088	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300009137\|Ga0066709_101944276	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300009137\|Ga0066709_102334767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300009137\|Ga0066709_102752860	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009137\|Ga0066709_103111601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300009162\|Ga0075423_10277000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1758	Open in IMG/M
3300010301\|Ga0134070_10081246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300010301\|Ga0134070_10266357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300010303\|Ga0134082_10114634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1073	Open in IMG/M
3300010304\|Ga0134088_10196029	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300010304\|Ga0134088_10256626	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300010320\|Ga0134109_10102331	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300010320\|Ga0134109_10158001	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010323\|Ga0134086_10466192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	518	Open in IMG/M
3300010325\|Ga0134064_10149190	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300010326\|Ga0134065_10148257	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300010333\|Ga0134080_10280493	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300010333\|Ga0134080_10534190	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010335\|Ga0134063_10106416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300010335\|Ga0134063_10364922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	703	Open in IMG/M
3300010335\|Ga0134063_10778602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300010336\|Ga0134071_10557467	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012200\|Ga0137382_10127496	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300012200\|Ga0137382_10906860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M
3300012201\|Ga0137365_10421642	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012207\|Ga0137381_10239002	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300012207\|Ga0137381_10364086	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300012211\|Ga0137377_10360401	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300012211\|Ga0137377_10790790	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300012211\|Ga0137377_11290679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300012356\|Ga0137371_10098467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2277	Open in IMG/M
3300012356\|Ga0137371_10947653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300012401\|Ga0134055_1011872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300012925\|Ga0137419_11154003	All Organisms → cellular organisms → Bacteria → FCB group	647	Open in IMG/M
3300012929\|Ga0137404_10924783	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012972\|Ga0134077_10223315	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012976\|Ga0134076_10094192	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300014150\|Ga0134081_10108422	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300014157\|Ga0134078_10155497	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300015264\|Ga0137403_11175259	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300017656\|Ga0134112_10007402	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300017657\|Ga0134074_1173624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300017659\|Ga0134083_10183873	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300018071\|Ga0184618_10033186	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300018431\|Ga0066655_10053260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2096	Open in IMG/M
3300018433\|Ga0066667_10483046	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300018433\|Ga0066667_11110203	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300018433\|Ga0066667_11805431	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300018468\|Ga0066662_12176213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300018482\|Ga0066669_10158824	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300018482\|Ga0066669_12333823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300020018\|Ga0193721_1101573	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300026296\|Ga0209235_1051931	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300026296\|Ga0209235_1162395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	864	Open in IMG/M
3300026296\|Ga0209235_1192024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	734	Open in IMG/M
3300026301\|Ga0209238_1104746	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300026308\|Ga0209265_1206283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300026310\|Ga0209239_1254888	Not Available	605	Open in IMG/M
3300026315\|Ga0209686_1005954	All Organisms → cellular organisms → Bacteria	5346	Open in IMG/M
3300026324\|Ga0209470_1353204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	527	Open in IMG/M
3300026325\|Ga0209152_10006172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4325	Open in IMG/M
3300026326\|Ga0209801_1041912	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300026327\|Ga0209266_1187717	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300026329\|Ga0209375_1161484	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300026329\|Ga0209375_1166541	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300026332\|Ga0209803_1157460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	873	Open in IMG/M
3300026333\|Ga0209158_1004465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7852	Open in IMG/M
3300026333\|Ga0209158_1022325	All Organisms → cellular organisms → Bacteria	2837	Open in IMG/M
3300026342\|Ga0209057_1132262	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300026343\|Ga0209159_1090253	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1355	Open in IMG/M
3300026343\|Ga0209159_1208889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300026523\|Ga0209808_1268804	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026529\|Ga0209806_1012455	All Organisms → cellular organisms → Bacteria	4540	Open in IMG/M
3300026529\|Ga0209806_1222690	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300026530\|Ga0209807_1013131	All Organisms → cellular organisms → Bacteria	4077	Open in IMG/M
3300026530\|Ga0209807_1122444	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300026532\|Ga0209160_1032664	All Organisms → cellular organisms → Bacteria	3254	Open in IMG/M
3300026542\|Ga0209805_1046090	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300026547\|Ga0209156_10181244	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300027748\|Ga0209689_1072947	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300027748\|Ga0209689_1434261	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027787\|Ga0209074_10312752	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027882\|Ga0209590_10026460	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300028536\|Ga0137415_10451407	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1091	Open in IMG/M
3300031740\|Ga0307468_101796324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300032180\|Ga0307471_103287485	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.86%
Host-Associated	Host-Associated	4.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.17%
Plants	Host-Associated → Plants	4.14%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.14%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.14%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	60.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	44.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	16.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	15.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_100526031	3300002562	Grasslands Soil	AVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
JGI25388J43891_10749042	3300002909	Grasslands Soil	GVPAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAGDQGARTFFADWLMVRTP
Ga0066674_100265734	3300005166	Soil	WQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTDVVEPTGTAGSRMFFADWLRMRS*
Ga0066674_103611952	3300005166	Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPSARRFFGDWLRDTVVTP
Ga0066677_100247483	3300005171	Soil	LLVFVAKGGVPGWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL*
Ga0066683_101502022	3300005172	Soil	WQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTQQTNVVEPTGPAGARLFFGDWLRRGVLTP*
Ga0066683_104828711	3300005172	Soil	RVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP*
Ga0066683_105399281	3300005172	Soil	VFAAKGGVPAWQRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARVFFGDWLRTGS*
Ga0066680_105148231	3300005174	Soil	WQRAVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARVFFGDWLRDTVLTP*
Ga0066673_100157543	3300005175	Soil	VYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP*
Ga0066679_105383262	3300005176	Soil	YYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAGDQGARTFFADWLRVRTP*
Ga0066690_103525861	3300005177	Soil	IPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPGTRMFFGDWLRDTVLTP*
Ga0066690_107535452	3300005177	Soil	AVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARVFFGDWLRDTVLTP*
Ga0066690_107872661	3300005177	Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP*
Ga0066690_109302911	3300005177	Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSSAIQPSARRFFGDWLRDTVLTP*
Ga0066684_100160273	3300005179	Soil	VYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL*
Ga0066685_103165562	3300005180	Soil	LVFVATKVPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTQQTNVVEPTGPAGARLFFGDWLRRGVLTP*
Ga0066685_104981271	3300005180	Soil	YYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSNAVQPGTRMFFSDWVLPR*
Ga0066685_105756912	3300005180	Soil	GGVPAWQRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARVFFGDWLRTGS*
Ga0066671_101853641	3300005184	Soil	WQRALYYLLNSLIIFSVSIGTNSVGVGLTHPPAQQTGAVEPGARMFFGDWLLSR*
Ga0066676_111081762	3300005186	Soil	RAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWILTP*
Ga0066675_100314231	3300005187	Soil	VYYLLNSLIIFSVSIGTNYVGVGLTHPPTRQTNVVEPTGPAGARLFFGDWLRMRS*
Ga0070708_1008603042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQTHVAEPTGSTGARVFFGDWLRTGS*
Ga0066689_103160241	3300005447	Soil	WQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTNVVEPTGSAGARMFFGDWLRQSVLTP*
Ga0066689_106027423	3300005447	Soil	KIPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSSAVDPGARRFFSDWVFTP*
Ga0066682_105559342	3300005450	Soil	RAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVTP*
Ga0070706_1014679191	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LNSLIIFSVSIGTNYVGVGVTHPPATQTNAGPSGPGPAGARSFFSDWW*
Ga0066701_109774252	3300005552	Soil	LLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP*
Ga0066695_105125582	3300005553	Soil	LWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVTP*
Ga0066695_107226331	3300005553	Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPSARRFFGDWLRDTVVTP*
Ga0066707_100168451	3300005556	Soil	QRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPGARTFFGDWLKVLSP*
Ga0066670_100377741	3300005560	Soil	YVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL*
Ga0066693_101204851	3300005566	Soil	YYVLNSLIIFSVSIGTNYAGVGLTHPPVQQGNTVDPGARTFFGDWLKVRTP*
Ga0066703_106950072	3300005568	Soil	AVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFGDWLRDTVLTP*
Ga0066705_101834444	3300005569	Soil	AVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAPEPAARVFFGDWLKVHTP*
Ga0066694_101049792	3300005574	Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSNAVETGPRRFFGDWVRTP*
Ga0066694_103835711	3300005574	Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0066656_106002481	3300006034	Soil	AVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPGARMFFGDWVLTP*
Ga0066652_1000510213	3300006046	Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTRQTNVVEPTGPAGARLFFGDWLRMRS*
Ga0066652_1004089893	3300006046	Soil	LWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0066658_100985853	3300006794	Soil	RVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP*
Ga0066665_107779782	3300006796	Soil	LLGLLVFVATTRAPLWQRAVYYLLNSLIIFSVSIGTNYVGVRVTHPPAQRTNGGEPTGPAGARTFFGDWLRMRSE*
Ga0066665_108683151	3300006796	Soil	LWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARTFFGDWLRETVLTP*
Ga0066665_109624752	3300006796	Soil	VPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTNVVEPTGSAGARMFFGDWLRQSVLTP*
Ga0066659_102228333	3300006797	Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP*
Ga0066659_111992031	3300006797	Soil	AVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQTNTIEPGTRAFFGDWLRMGS*
Ga0066659_112684081	3300006797	Soil	TRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP*
Ga0075433_116281742	3300006852	Populus Rhizosphere	YYLLNSLIIFSVSIGTNYVGVGVTHPPATQTNAPTGPGPAGARAFFSDWW*
Ga0075425_1029958561	3300006854	Populus Rhizosphere	AVYYLLNSLIIFSVSIGTNYVGVGVTHPPATQTNAPSGPAGSRSFFSDWR*
Ga0075426_115054832	3300006903	Populus Rhizosphere	AVYYVLNSLIIFSVSIGTNYVGVGLTHPAAQQTSAGDPGTRTFFGDWFRVLTP*
Ga0075436_1000676873	3300006914	Populus Rhizosphere	WQRAVYYVLNSLIIFSVSIGTNYVGVGRTHPAAQQTNGGDRAARTFFGDWLR*
Ga0075436_1003487802	3300006914	Populus Rhizosphere	LLNSLIIFSVSIGTNYVGVGVTHPPATQTNAGPTGPGPAVARSFFSDWW*
Ga0066710_1025006812	3300009012	Grasslands Soil	AVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARVFFGDWLRDTVLTP
Ga0066710_1039508121	3300009012	Grasslands Soil	TRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP
Ga0066710_1043161431	3300009012	Grasslands Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP
Ga0099827_100175041	3300009090	Vadose Zone Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP
Ga0099827_113338222	3300009090	Vadose Zone Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSARMFFGDWLRDSVLTP
Ga0099827_116763912	3300009090	Vadose Zone Soil	VYYVLNSLIIFSVSIGTNYVGVGLMHPPAQQSNAVDSAPRAFFGDWLRVLAR*
Ga0066709_1006385221	3300009137	Grasslands Soil	KIPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPGTRMFFGDWLRDTVLTP*
Ga0066709_1014770881	3300009137	Grasslands Soil	RVPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTDVVEPTGTAGSRMFFADWLRMRS*
Ga0066709_1019442762	3300009137	Grasslands Soil	VFVAKGGVPGWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL*
Ga0066709_1023347671	3300009137	Grasslands Soil	QRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVTP*
Ga0066709_1027528602	3300009137	Grasslands Soil	AVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAPEPGARTFFGDWLRVGS*
Ga0066709_1031116012	3300009137	Grasslands Soil	TRVPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTQQTNVVEPTGSAGARMFFGDWLRQSVLTP*
Ga0075423_102770001	3300009162	Populus Rhizosphere	RAVYYLLNSLIIFSVSIGTNYVGVGVTHPPATQTNAPTGPGPAGARAFFSDWW*
Ga0134070_100812461	3300010301	Grasslands Soil	LNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARAFFGDWLRTGS*
Ga0134070_102663572	3300010301	Grasslands Soil	LNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARVFFGDWLRTGS*
Ga0134082_101146343	3300010303	Grasslands Soil	YYVLNSLIIFSVSIGTNYVGGGLTHPPAQQSNAGDQGARTFFADWLMVRTP*
Ga0134088_101960291	3300010304	Grasslands Soil	TRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0134088_102566262	3300010304	Grasslands Soil	AVYYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSSAVDPGARRFFSDWVFTP*
Ga0134109_101023312	3300010320	Grasslands Soil	VPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTQQTNVVEPTGPAGARLFFGDWLRRGVLTP*
Ga0134109_101580012	3300010320	Grasslands Soil	VFVSKGGVPGWQRALYYLLNSLSIFSVSIGAVYAGVGLAHPPARQTSAVEPGARMFFGDWLLSP*
Ga0134086_104661922	3300010323	Grasslands Soil	LLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWILTP*
Ga0134064_101491901	3300010325	Grasslands Soil	VATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPSARRFFGDWLRDTVVTP*
Ga0134065_101482572	3300010326	Grasslands Soil	GLLVFVATRVPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTQQTNVVEPTGPAGARLFFGDWLRRGVLTP*
Ga0134080_102804931	3300010333	Grasslands Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP*
Ga0134080_105341902	3300010333	Grasslands Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0134063_101064161	3300010335	Grasslands Soil	PAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAASSARTFFADWLRVPAP*
Ga0134063_103649223	3300010335	Grasslands Soil	LLVFVAKGGSVPPWQRAVYYLLNSLIIFSVSIGTNYVGVGVTRPPPQQNKVAAPAGPSGARVFFGDWFETGS*
Ga0134063_107786021	3300010335	Grasslands Soil	VFVAKGGVPAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAGDQGARTFFADWLMVRTP*
Ga0134071_105574671	3300010336	Grasslands Soil	APLRQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPGARLFFGDWLRDTVLTP*
Ga0137382_101274963	3300012200	Vadose Zone Soil	AKGGVPAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAASSARTFFGDWLRVPAP*
Ga0137382_109068601	3300012200	Vadose Zone Soil	FVATKIPLWQRALYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQTGARRFFGDWLRDTVHTP*
Ga0137365_104216422	3300012201	Vadose Zone Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQTNTIEPGTRAFFGDWLRMGS*
Ga0137381_102390024	3300012207	Vadose Zone Soil	ATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTPPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0137381_103640863	3300012207	Vadose Zone Soil	FVATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP*
Ga0137377_103604011	3300012211	Vadose Zone Soil	RAVYYLLNSLIIFSVSIGTNYVGVGLTHPPGQQTNTIEPGTRAFFGDWLRMGS*
Ga0137377_107907902	3300012211	Vadose Zone Soil	PLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSNAVQPRARMFFGDWLRGSVLTP
Ga0137377_112906791	3300012211	Vadose Zone Soil	GVPAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAASSARTFFGDWLRVPAP
Ga0137371_100984671	3300012356	Vadose Zone Soil	KIPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQTNTIEPGTRAFFGDWLRMGS*
Ga0137371_109476531	3300012356	Vadose Zone Soil	GVPAWQRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARVFFGDWLRTGS*
Ga0134055_10118723	3300012401	Grasslands Soil	WQRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGPSGARVFFGDWFETGS*
Ga0137419_111540033	3300012925	Vadose Zone Soil	VYYLLNSLIIFSVSIGTNYVGVGVTRPPTQQTNGGGPTGPAGARVFFGDWLRMGSWPE*
Ga0137404_109247832	3300012929	Vadose Zone Soil	PLWQRAVYYVLNSLIIFSVSIGTNYVGVGLIHPPTQQTNAGGPTGPAGSRPFFGDWLR*
Ga0134077_102233152	3300012972	Grasslands Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP*
Ga0134076_100941923	3300012976	Grasslands Soil	AMTSSVPLWQRAVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFGDWLRDTVLTP*
Ga0134081_101084221	3300014150	Grasslands Soil	YLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP*
Ga0134078_101554971	3300014157	Grasslands Soil	VYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTDVVEPTGTAGSRMFFADWLRMRS*
Ga0137403_111752591	3300015264	Vadose Zone Soil	ATKAPLWQRAVYYVLNSLIIFSVSIGTNYVGVGLIHPPTQQTNAGGPTGPAGSRPFFGDWLR*
Ga0134112_100074027	3300017656	Grasslands Soil	YYLLNSLIIFSVSIGTNYVGAGLTHPPARQTNGVEPADPAGSREFFSDWLRVGS
Ga0134074_11736241	3300017657	Grasslands Soil	RAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP
Ga0134083_101838732	3300017659	Grasslands Soil	LWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP
Ga0184618_100331861	3300018071	Groundwater Sediment	ILGFMAKGGVPGWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQTNAVEPGARLFFGDWLRVLTP
Ga0066655_100532602	3300018431	Grasslands Soil	WQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTRQTNVVEPTGPAGARLFFGDWLRMRS
Ga0066667_104830461	3300018433	Grasslands Soil	VYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL
Ga0066667_111102032	3300018433	Grasslands Soil	QRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVVTP
Ga0066667_118054311	3300018433	Grasslands Soil	TRVPLWQRAVYYLLNSLIIFAVSIGTNYVGVGLTHPPTPQTNVVEPTGSAGARMFFGDWLRQSVLTP
Ga0066662_121762132	3300018468	Grasslands Soil	NSLIIFSVSIGTNYVGVGLTPPPAQQSNAMQPSARRFFGDWLRDTVLTP
Ga0066669_101588242	3300018482	Grasslands Soil	AVYYVLNSLIIFSVSIGTNYAGVGLTHPPAQQSNAPEPGARTFFGDWLRVGS
Ga0066669_123338231	3300018482	Grasslands Soil	PAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAGDQGARTFFADWLRVRTP
Ga0193721_11015732	3300020018	Soil	GVPVWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVEPASARSFFGDWLRVLT
Ga0209235_10519313	3300026296	Grasslands Soil	RAVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARTFFGDWLRDTVLTP
Ga0209235_11623952	3300026296	Grasslands Soil	RAVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFGDWLRDTVLTP
Ga0209235_11920241	3300026296	Grasslands Soil	RAVYYLVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARVFFGDWLRDTVLTP
Ga0209238_11047461	3300026301	Grasslands Soil	LVNSLIIFAVSIGTNYVGVGLTHPPAQQSNAVQPRARVFFGDWLRDTVLTP
Ga0209265_12062832	3300026308	Soil	VAKGGVPAWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAASSARTFFADWLRVPAP
Ga0209239_12548882	3300026310	Grasslands Soil	AKGGVPVWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPARQTNAVEPGARTFFGDWLRGAH
Ga0209686_10059545	3300026315	Soil	LLVFVAKGGVPGWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL
Ga0209470_13532041	3300026324	Soil	QRAVYYLLNSLIIFSVSIGTNYAGVAVTHPPARQNQVAAPAGPSGARVFFGDWFETGS
Ga0209152_100061724	3300026325	Soil	ATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSSAIQPSARRFFGDWLRDTVLTP
Ga0209801_10419123	3300026326	Soil	RVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP
Ga0209266_11877172	3300026327	Soil	ATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSPRRFFGDWLRDTVLTP
Ga0209375_11614841	3300026329	Soil	NSLIIFSVSIGTNYVGVGLTHPPTQQSNAVQPRARMFFGDWLRGSVLTP
Ga0209375_11665411	3300026329	Soil	TRVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP
Ga0209803_11574601	3300026332	Soil	RAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTRQTNVVEPTGPAGARLFFGDWLRMRS
Ga0209158_10044651	3300026333	Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLT
Ga0209158_10223251	3300026333	Soil	VPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVT
Ga0209057_11322621	3300026342	Soil	VYYLLNSLIIFSVSIGTNYVGVGVTHPPAQRTNGGEPTGPAGPRTFFGDWLRMRS
Ga0209159_10902532	3300026343	Soil	LWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPTQQSNAVETGPRRFFGDWVRTP
Ga0209159_12088892	3300026343	Soil	QRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPAQQNKVAAPAGQSGARAFFGDWLRTGS
Ga0209808_12688041	3300026523	Soil	YVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL
Ga0209806_10124551	3300026529	Soil	LLGLAFVATKIPLWQRALYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPGTRMFFGDWLRDTVLTP
Ga0209806_12226901	3300026529	Soil	YLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAMQPSARRFFGDWLRDTVLTP
Ga0209807_10131315	3300026530	Soil	PGWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAPEPAARVFFGDWLKVHTP
Ga0209807_11224443	3300026530	Soil	LLVFIAKGGVPGWQRTVYYVLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAAEPAARVFFGDWLRLGL
Ga0209160_10326641	3300026532	Soil	RVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVTP
Ga0209805_10460901	3300026542	Soil	VLNSLIIFSVSIGTNYVGVGLTRPPAQQSNAPEPAARVFFGDWLKVHTP
Ga0209156_101812442	3300026547	Soil	LLVFVAKGGVPVWQRALYYLLNSLIIFSVSIGTNYVGVGLTHPPARQTSAVEPGARMFFGDWLLSP
Ga0209689_10729474	3300027748	Soil	YYLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAVQPRARMFFSDWVLTP
Ga0209689_14342611	3300027748	Soil	YLLNSLIIFSVSIGTNYVGVGLTHPPAQQSNAIQPSPRRFFGDWLRDTVVTP
Ga0209074_103127521	3300027787	Agricultural Soil	YYLLNSLIIFSVSIGTNYVGVGVTHPPATQTNAPTGPAGARSFFSDWR
Ga0209590_100264605	3300027882	Vadose Zone Soil	FVATRVPLWQRAVYYLLNSLIIFSVSIGTNYVGMGLTHHPARQTNVVEPTGPVGPRMFFGDWLRMGS
Ga0137415_104514073	3300028536	Vadose Zone Soil	LLVFVATTRVPVWQRAVYYLLNSLIIFAVSIGTNYVGVGVTHPPARQNKVAAPAGPSGARVFFGDWFRTGS
Ga0307468_1017963242	3300031740	Hardwood Forest Soil	KGGAVPLWQRAVYYLLNSLIIFSVSIGTNYVGVGVTHPSATQTNAPTGPGGGPAGARSFFTDWR
Ga0307471_1032874852	3300032180	Hardwood Forest Soil	PVWQRAVYYVLNSLIIFSVSIGTNYVGVGLTHPAAQQSNPVEPGARVFFGDWLRVLTPRPPLLFGRGGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050272

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences