Metagenome / Metatranscriptome Family F050409

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050409
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	90 residues
Representative Sequence	MSENGMRIIDIDGHVREADDLFEKYLEPPFRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRVKEDGSPVNENRHLATDPKDRLKAMD
Number of Associated Samples	132
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.17 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.034 % of family members)
Environment Ontology (ENVO)	Unclassified (28.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.86% β-sheet: 11.86% Coil/Unstructured: 76.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF09084	NMT1	24.14
PF01321	Creatinase_N	9.66
PF02515	CoA_transf_3	0.69
PF13365	Trypsin_2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	24.14
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	24.14
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	9.66
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.07 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.38 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	68.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.38 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.69 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.69 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	0.69 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Frankia discariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	0.69 %
Oscillatoria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
unclassified Oscillatoria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria	0.69 %
Frankia discariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	0.69 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.38 %
Oscillatoria sp. PCC 10802	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria → Oscillatoria sp. PCC 10802	0.69 %
Frankia discariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	0.69 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001308723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	826	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0493791	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300001431\|F14TB_107330044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300003992\|Ga0055470_10062961	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300003999\|Ga0055469_10001070	All Organisms → cellular organisms → Bacteria	3624	Open in IMG/M
3300004145\|Ga0055489_10036553	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300004157\|Ga0062590_102035638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300005171\|Ga0066677_10028472	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300005175\|Ga0066673_10056721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1993	Open in IMG/M
3300005183\|Ga0068993_10293792	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005183\|Ga0068993_10308745	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005289\|Ga0065704_10576625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300005293\|Ga0065715_10964759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300005294\|Ga0065705_10068243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300005295\|Ga0065707_10709426	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005334\|Ga0068869_100303397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1290	Open in IMG/M
3300005341\|Ga0070691_10229299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
3300005353\|Ga0070669_100038998	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300005353\|Ga0070669_101671345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300005356\|Ga0070674_101979674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300005365\|Ga0070688_101249450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300005441\|Ga0070700_101676701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300005535\|Ga0070684_100645767	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005545\|Ga0070695_101893862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia discariae	501	Open in IMG/M
3300005546\|Ga0070696_100231641	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300005563\|Ga0068855_100889170	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005718\|Ga0068866_10393620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300005719\|Ga0068861_102088798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300005840\|Ga0068870_11289155	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006046\|Ga0066652_100061142	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300006358\|Ga0068871_100351622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1304	Open in IMG/M
3300006358\|Ga0068871_100686081	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006846\|Ga0075430_101345553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300006847\|Ga0075431_101264144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300006853\|Ga0075420_101197281	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300006853\|Ga0075420_101432421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300006854\|Ga0075425_100762770	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300006865\|Ga0073934_10795325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria → Oscillatoria sp. PCC 10802	539	Open in IMG/M
3300006904\|Ga0075424_101402782	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300006914\|Ga0075436_100030064	All Organisms → cellular organisms → Bacteria	3738	Open in IMG/M
3300006917\|Ga0075472_10364805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300006918\|Ga0079216_10291852	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300006954\|Ga0079219_10906737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300006954\|Ga0079219_11089626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300009094\|Ga0111539_10068928	All Organisms → cellular organisms → Bacteria	4176	Open in IMG/M
3300009100\|Ga0075418_10507813	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300009100\|Ga0075418_10720868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1076	Open in IMG/M
3300009111\|Ga0115026_11022871	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009147\|Ga0114129_12888847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300009156\|Ga0111538_12215532	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009162\|Ga0075423_12205483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300009553\|Ga0105249_10764146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1029	Open in IMG/M
3300009609\|Ga0105347_1322622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300010037\|Ga0126304_10543742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
3300010037\|Ga0126304_11170225	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010323\|Ga0134086_10283658	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010335\|Ga0134063_10035701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2130	Open in IMG/M
3300010358\|Ga0126370_11180081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300010375\|Ga0105239_13634948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300010399\|Ga0134127_10098931	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300010399\|Ga0134127_10318493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1505	Open in IMG/M
3300010400\|Ga0134122_10408747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1201	Open in IMG/M
3300010401\|Ga0134121_11722833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300010403\|Ga0134123_12088992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300011409\|Ga0137323_1006471	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300011438\|Ga0137451_1217038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300012285\|Ga0137370_11008818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300012359\|Ga0137385_10825587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300012480\|Ga0157346_1029425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300012484\|Ga0157333_1022941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300012491\|Ga0157329_1006114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300012503\|Ga0157313_1028299	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300012910\|Ga0157308_10455711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012951\|Ga0164300_10032340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1933	Open in IMG/M
3300014300\|Ga0075321_1111434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300014314\|Ga0075316_1121637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300014873\|Ga0180066_1030134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1028	Open in IMG/M
3300014883\|Ga0180086_1024994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1355	Open in IMG/M
3300015256\|Ga0180073_1141399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300015371\|Ga0132258_13816796	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300015372\|Ga0132256_103487116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300015374\|Ga0132255_104799502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300015374\|Ga0132255_105901763	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300017654\|Ga0134069_1085704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1018	Open in IMG/M
3300017930\|Ga0187825_10086090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1081	Open in IMG/M
3300017966\|Ga0187776_10085297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1856	Open in IMG/M
3300018000\|Ga0184604_10009359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2013	Open in IMG/M
3300018028\|Ga0184608_10219015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300018051\|Ga0184620_10020906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1625	Open in IMG/M
3300018056\|Ga0184623_10128264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1173	Open in IMG/M
3300018064\|Ga0187773_10048299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1950	Open in IMG/M
3300018071\|Ga0184618_10126256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1027	Open in IMG/M
3300018072\|Ga0184635_10312592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300018481\|Ga0190271_11887626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300020200\|Ga0194121_10212333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1039	Open in IMG/M
3300021063\|Ga0206227_1016999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300021063\|Ga0206227_1129337	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300021082\|Ga0210380_10282602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300021082\|Ga0210380_10371397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300021332\|Ga0210339_1026254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300025792\|Ga0210143_1098568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300025901\|Ga0207688_10469926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300025904\|Ga0207647_10406789	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300025908\|Ga0207643_10910616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300025917\|Ga0207660_10523867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300025930\|Ga0207701_11094989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300025942\|Ga0207689_11625647	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300025945\|Ga0207679_11804002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300025947\|Ga0210067_1018432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300025960\|Ga0207651_10250074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1450	Open in IMG/M
3300026028\|Ga0208420_1009285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	830	Open in IMG/M
3300026088\|Ga0207641_11022219	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300026089\|Ga0207648_11124093	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300026118\|Ga0207675_100744715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300026118\|Ga0207675_101721110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300026309\|Ga0209055_1088638	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300026325\|Ga0209152_10352323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300026535\|Ga0256867_10092300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1174	Open in IMG/M
3300027552\|Ga0209982_1071063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300027560\|Ga0207981_1109575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300027717\|Ga0209998_10056896	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300027787\|Ga0209074_10396939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300027907\|Ga0207428_10396666	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300027909\|Ga0209382_10331392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1710	Open in IMG/M
3300027909\|Ga0209382_11890425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300027964\|Ga0256864_1249230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300028380\|Ga0268265_11690650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300028802\|Ga0307503_10227047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300029636\|Ga0222749_10692816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300030606\|Ga0299906_10657624	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300030620\|Ga0302046_10181569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1729	Open in IMG/M
3300031184\|Ga0307499_10246477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300031198\|Ga0307500_10040658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1090	Open in IMG/M
3300031854\|Ga0310904_10558195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300031879\|Ga0306919_10473305	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	965	Open in IMG/M
3300031890\|Ga0306925_11064608	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031901\|Ga0307406_11718947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300031908\|Ga0310900_10893774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	724	Open in IMG/M
3300031942\|Ga0310916_10248467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1499	Open in IMG/M
3300032012\|Ga0310902_11027912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300032075\|Ga0310890_11007506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300032180\|Ga0307471_101334696	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300033289\|Ga0310914_10776079	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	856	Open in IMG/M
3300033475\|Ga0310811_10517938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1240	Open in IMG/M
3300034417\|Ga0364941_089171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.83%
Host-Associated	Host-Associated	35.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.21%
Plants	Host-Associated → Plants	35.17%
Aquatic	Environmental → Aquatic	18.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.55%
Sediment	Environmental → Aquatic → Sediment	8.28%
Marine	Environmental → Aquatic → Marine	6.21%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.38%
Roots	Host-Associated → Plants → Roots	1.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Floodplain	Environmental → Terrestrial → Floodplain	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.28%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.07%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.38%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Coastal	Environmental → Aquatic → Marine → Coastal	0.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.69%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.28%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.07%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.07%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.69%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.69%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.28%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.07%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.07%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.07%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.07%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.38%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.38%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.38%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.38%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.69%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.69%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026028	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001361791	2001200001	Soil	MSEQAIRVIDIDGHVREADDLWERYLESPFRARAAKIEKVANGQLLFVLKSKHHHREPDENPFRSKDDRAPVNENRDLATRSRAPGF
ICChiseqgaiiDRAFT_04937911	3300000033	Soil	MADTGIRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKE
F14TB_1073300442	3300001431	Soil	MSENAVRIIDIDGHVREADDLWEKYLEPPFRARAPKLEQVANGQLLFRLEGDRHHRRPDETPFRVKEDGSPANENRHLATDPNDRLKAMDRDRIERG
Ga0055470_100629612	3300003992	Natural And Restored Wetlands	MSENGMRILDIDGHVREADDLFEKYLDVPFRARAPKIERVANGQLLFRLEGDRHHRRPDESPFRIKADGSAVNEQRHLATNPKQRLEAMDR
Ga0055469_100010705	3300003999	Natural And Restored Wetlands	MPEDTMRIIDIDGHVREADDLFEKYLEPAFRPRAPKVERVPNGQLLFRLEGDRHHRRPDESPFRIKADG
Ga0055489_100365531	3300004145	Natural And Restored Wetlands	MTENGIRIIDVDGHVRESDDLFEKYLEPPFRTRAPRIEEVANGQLLFRLEGERHHRRPDESPFRVKTDGSPVNEQRH
Ga0062590_1020356381	3300004157	Soil	MADNGIHIIDIDGHVREADDLFEKYLEPPFRAHAPKIEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATNPKQRL
Ga0066677_100284723	3300005171	Soil	MSEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEHRDLATDPHGRL
Ga0066673_100567211	3300005175	Soil	MSEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEHRDLA
Ga0068993_102937922	3300005183	Natural And Restored Wetlands	MSENGMRIIDVDGHVREADDLFEKYLEPPFRVRAPKIEKVANGQLLFRLEGDRHHRRPDESPFRVKADGSP
Ga0068993_103087451	3300005183	Natural And Restored Wetlands	MTDNGVRIIDVDGHVREADDLFEKYLEPPFRARAPKIERVANGQLLFRLEGNRHHRRPDESPFRVKADGSP
Ga0065704_105766251	3300005289	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGDRHHRKPDETPFRIKADGSPANENRHLATNPKQRLTAMDRDR
Ga0065715_109647592	3300005293	Miscanthus Rhizosphere	MKMPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPRQRLAAMNRDRIERG
Ga0065705_100682431	3300005294	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRXPRVEKVANGQLLFRLEGDRHHRKPDESPFRVKEDGAPVNENRHLATDPKQRLAAMDRDRIERGLLFPSAGL
Ga0065707_107094262	3300005295	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGDRHHRKPDETPFRIKADGSPANENRHLATNPKQRLTAMDRDRIERGLLFPSAALY
Ga0068869_1003033971	3300005334	Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVERVANGQLLFRLEGERHHRRPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQEDA
Ga0070691_102292991	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENR
Ga0070669_1000389981	3300005353	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRRPDETPFRVKEDG
Ga0070669_1016713451	3300005353	Switchgrass Rhizosphere	MPDDGIRIIDIDGHVREADDLFEKYLEPPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDGSPANENRHLATHPKQRLVAMDRDRIERGLLFPSA
Ga0070674_1019796742	3300005356	Miscanthus Rhizosphere	MPNDGVRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDGSPANENRHLATHPKQRLVAMDRDRIERG
Ga0070688_1012494502	3300005365	Switchgrass Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAQQRLQAM
Ga0070700_1016767011	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRRDESPFRIKEDGSPVNENRHLATN
Ga0070684_1006457671	3300005535	Corn Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGDRHHRKPDETPFRIKADGSPANENRHLATNPKQRLTAMDRDRIERGLLFPSA
Ga0070695_1018938621	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSDREVRIVDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQMLFRLEGDRHHRRPDETPFRVKEDGAEANENRHLATNPKQ
Ga0070696_1002316412	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHL
Ga0068855_1008891702	3300005563	Corn Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPK
Ga0068866_103936201	3300005718	Miscanthus Rhizosphere	MPDDGIRIIDIDGHVREADDLFEKYLEVPYRARAPKVEKVANGQQLFRLEGERHHRRPDESPFPIKDDGAPANENRHLATHPKQRLVAMDRDRIERGLLFPSAGLYLPSVQEEAYAAALC
Ga0068861_1020887982	3300005719	Switchgrass Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAKQRLQAMD
Ga0068870_112891551	3300005840	Miscanthus Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDG
Ga0066652_1000611421	3300006046	Soil	MSEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEHRDLAT
Ga0068871_1003516221	3300006358	Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVERVANGQLLFRLEGERHHRRPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQEDAYAA
Ga0068871_1006860812	3300006358	Miscanthus Rhizosphere	MSENAVRIIDIDGHVREADDLFEKYLEAPYRERAPKVEQLSNGQQLFRLEGDRHHRRPDETPFRIKEDGTPANENRHLATNPKQRLQAMDRDR
Ga0075430_1013455531	3300006846	Populus Rhizosphere	MLESEMRIIDIDGHVRESDDLFEKYLEPAFRARAPKVEKVPNGQLLFRLEGDRHHRRPDESPFRLKADGSPVNENRHLATDPKDRLKAMDRDGIERGLLF
Ga0075431_1012641441	3300006847	Populus Rhizosphere	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDETPFRIKDDGSPVNEQRHLATHPKQRLQAMDRDRIERGLLFP
Ga0075420_1011972812	3300006853	Populus Rhizosphere	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDETPFRIKDDGSPVNEQ
Ga0075420_1014324211	3300006853	Populus Rhizosphere	MPNDGVRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFRIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFPSAGLYLPSVQEEAYAAA
Ga0075425_1007627701	3300006854	Populus Rhizosphere	MLDLRIIDVDGHVREADDLFEKYLEAPFRDRAPRVEKVANGQLLFLLEGDRHHRRPDETPFRIKEDGSPANENRHLATN
Ga0073934_107953251	3300006865	Hot Spring Sediment	MRIIDIDGHVREADDLWERYLEPPFRARAPRIEQVANGQLLFRLEGGRHHRRPDESPFRVKTDGSP
Ga0075424_1014027821	3300006904	Populus Rhizosphere	MSDRDVRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQMLFRLEGDRHHRRPDETPFRIKDDGSPANENRHLATNPKQRLAAM
Ga0075436_1000300641	3300006914	Populus Rhizosphere	MPDNELRIIDIDGHVREADDLFERYLEPPFRARAPRVEKVANGQVLFRLEGERHHRRPDETPFRVKDDGSPANENRHLATDP
Ga0075472_103648052	3300006917	Aqueous	MANSDIRIIDIDGHVREADDLFEKYLEPPFRARAPKIEKVANGQLLFKLEGDRHHRRPDESPFRVKNDGSPVNEGRHLATNPKQRLEAMDRDRID
Ga0079216_102918521	3300006918	Agricultural Soil	MAESEMRIIDIDGHVREADDLFEKYLEPAFRARAPKVEKVPNGQLLFRLEGDRHHRRPDESPFRVKEDGSPVNENRHLAT
Ga0079219_109067371	3300006954	Agricultural Soil	MSDHEVRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQMLFRLEGDRHHRRPDETPFRIKDDGAEANENRHLATNPKQRLAAMDRDRIERGLLFPSAGLYLTSVEEEPYAAAL
Ga0079219_110896261	3300006954	Agricultural Soil	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNR
Ga0111539_100689281	3300009094	Populus Rhizosphere	MKMPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRFEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRFAAMNRDRIERGLLFPSAGLYLPSV
Ga0075418_105078133	3300009100	Populus Rhizosphere	MSENAVRIIDIDGHVREADDLWEKYLEPPFRARAPKVEQVANGQLLFRLEGDRHHRRPDETPFRVKEDGSPANENRHLATDPNDRLKAMDRDRI
Ga0075418_107208681	3300009100	Populus Rhizosphere	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDETPFRIKDDGSPVNEQRHLATHPKQRLQAMDRDRIERGLLFPSAGLYLTSVHE
Ga0115026_110228712	3300009111	Wetland	MADNGIRIIDIDGHVREADDLFEKYLEAPFRARAPRIEKVANGQLLFRLEGDRHHRRPDESPFRIKT
Ga0114129_128888471	3300009147	Populus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRAPRVEKVANGQLLFRLEGDRHHRKPDETPFRIKEDGSPANENRHLATDPKQRLAAMD
Ga0111538_122155322	3300009156	Populus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGDRHHRKPDETPFRNKADGSPANENRHLATNPKQRLTAMDRDRIEQGLLFPSAGLYLPSVQNEA
Ga0075423_122054832	3300009162	Populus Rhizosphere	MAENEIRIIDVDGHVREADDLFEKYLEAPFRDRAPKIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQRLQ
Ga0105249_107641462	3300009553	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVERVANGQLLFRLEGERHHRRPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQE
Ga0105347_13226221	3300009609	Soil	MADNGIRIIDIDGHVREADDFFEKYLEVPFRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATNPKQRLEAMDRDRIDRGMLFPSAGLYLASVQEDAYA
Ga0126304_105437421	3300010037	Serpentine Soil	MADNEIRIIDIDGHVREADDLFEKYLEAPYRERAPKVERVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNERRHLATHPKQRLEAMDRDR
Ga0126304_111702251	3300010037	Serpentine Soil	MSEQAIRVIDIDGHVREADDLWERYLEQPFRARAPKIERVANGQLLFLLEGKRHHRRPDETPFRQKDDGSPVN
Ga0134086_102836582	3300010323	Grasslands Soil	VIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEH
Ga0134063_100357013	3300010335	Grasslands Soil	MPEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKFDESPFRIKSDDSPVNEHRDLAMDPH*
Ga0126370_111800812	3300010358	Tropical Forest Soil	MPENHIRVIDIDGHVREADNLWERYLEAPFRARAPKIEKVPNGQLLFLLEGKRHHRRPDESPFQIKADDSPVNEHRDLATDPRERLQDMDRDGI
Ga0105239_136349481	3300010375	Corn Rhizosphere	MPSNDMRIIDVDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAKQRLQAMDRDRIERGLLFPSAGLYLTSVLEEAYAAA
Ga0134127_100989314	3300010399	Terrestrial Soil	MSEIGIRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATHPKQRLQAMDRDRIERGLLFPSAGLYL
Ga0134127_103184931	3300010399	Terrestrial Soil	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPRQRLAAMDRDRIERGLLFPSAGLYLPSVQNEAYAAA
Ga0134122_104087472	3300010400	Terrestrial Soil	MPDDGIRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDESPFPIKDDGSPANENRHLATHPKQRLVAMDRDRIERGLLFP
Ga0134121_117228332	3300010401	Terrestrial Soil	MSDRDVRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQMLFRLEGDRHHRRPDETPFRIKDDGSPA
Ga0134123_120889921	3300010403	Terrestrial Soil	MRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLAT
Ga0137323_10064714	3300011409	Soil	MSENGMRIIDVDGHVREADDLFEKYLEPPFRARAPKIEKVTNGQLLFRLEGDRHHRRPDETPFRVKADGSPVNEQRHLATHPKQRLQAMDRDHIERGLLFPSA*
Ga0137451_12170381	3300011438	Soil	MADNGIQIIDIDGHVREADDLFEKYLAAPFRERAPKVEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATN
Ga0137370_110088182	3300012285	Vadose Zone Soil	MPDNEIRIIDIDGHVREADDLFEKYLEPPFRARAPRVEQVANGQMLFRLEGERHHRRPDETPFLIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFPSAGLYLTSVQEED
Ga0137385_108255873	3300012359	Vadose Zone Soil	MSENAVRIIDIDGHVREADDLWEKYLEPPFRARAPKVEQVANGQLLFRLEGDRHHRRPDETPFRVKEDGSPANENRHLATDPNDRLKAMDRDRIERGL
Ga0157346_10294252	3300012480	Arabidopsis Rhizosphere	MPDDGIRIIDIDGHVREADDLFEKYLESPYRARAPKVEKVANGQQLFRLEGERYHRRPDESPFPIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFPSAGLYLPSVQ*
Ga0157333_10229412	3300012484	Soil	MPDDGIRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRSDETPFPIKDDGSPANENRHLATHPKQRLVAMDRDRIERGLLFPSAGLYLPSVQEEAYAAALC
Ga0157329_10061141	3300012491	Arabidopsis Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFLLEGDRHHRRPDETPFRIKEDGSPANENRHLATNPKQRLAAMDRDRIERGLLFPSAALYLPSVEEESYA
Ga0157313_10282991	3300012503	Arabidopsis Rhizosphere	MPDDGIRIIDIDGHVREADDLFEKYLEAPYRTRAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDG
Ga0157308_104557111	3300012910	Soil	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQEDAYA
Ga0164300_100323403	3300012951	Soil	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGDRHHRKPDETPFRIKADGSPANENRHLATNPKQRLTAMDRDRIERGLLFPSAGLYLPSVQN
Ga0075321_11114341	3300014300	Natural And Restored Wetlands	MPEDTMRIIDIDGHVREADDLFEKYLEPAFRPRAPKVERVPNGQLLFRLEGDRHHRRPDESPFRIKADGSPVNENRH
Ga0075316_11216371	3300014314	Natural And Restored Wetlands	MPDNGTRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQLLFRLEGERHHRRPDESPFRVKEDGSPVNEQRHLATQPKQRLEAMDRDRIERGLLFPSAGLYLTSVQEEAYAAALC
Ga0180066_10301342	3300014873	Soil	MRVIDIDGHVREADDLWERYLEAPFRARAPKIEKVANGQLLFLLEGKRHHRRPDESPFPVKEDGSPVNEHRSLAPDPRERLKD
Ga0180086_10249942	3300014883	Soil	MTDNHIRIIDIDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFKLEGERHHRRPDESPFRVKDDGSPVNEGRHLATNPKQRLEAMDRDRIERGLMFPSA
Ga0180073_11413992	3300015256	Soil	MSENAIRIIDVDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQRLQAMDRD
Ga0132258_138167961	3300015371	Arabidopsis Rhizosphere	MKMPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRFEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRD
Ga0132256_1034871162	3300015372	Arabidopsis Rhizosphere	MPNDGVRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDGSPANENRHLA
Ga0132255_1047995022	3300015374	Arabidopsis Rhizosphere	MDPRIIDIDGHVREADDLFEKYLEAPFQNRAPRVEKVANGQLLFRLEGDRHHRKPDESPFRVKEDGAPVNENRHLATDPKQRLAAM
Ga0132255_1059017632	3300015374	Arabidopsis Rhizosphere	MSDLRIIDIDGHVREADDLFEKYLEAPFQDRAPRVEKVANGQLLFRLEGDRHHRKPDESPFRVKEDGAPVNEN
Ga0134069_10857042	3300017654	Grasslands Soil	MPEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIEKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEHRDLATDPH
Ga0187825_100860901	3300017930	Freshwater Sediment	MSENGMRILDIDGHVREADDLFEKYLEAPFRARAPKIERVANGQLLFRLEGDRHHRRPDESPFRVKDNGSAVNEHRHLATNPKQRLQAMDRDRIER
Ga0187776_100852973	3300017966	Tropical Peatland	MAENGVRIIDIDGHVREADDLFEKYLEAPFRGRAPKVEKVPNGQQLFRLEGERHHRRPDETPFRIKDDGS
Ga0184604_100093593	3300018000	Groundwater Sediment	MPNNDMRIIDVDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAQQRLQAMDRDRIERGLLFPSAGLYLPSVLEEAYAAAL
Ga0184608_102190152	3300018028	Groundwater Sediment	MPNNDMRIIDVDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKKDGSPVNENRHLATNAQQRLQAM
Ga0184620_100209061	3300018051	Groundwater Sediment	MPNNDMRIIDVDGHVREADDLFEKYLEAPFRARAPQIEKVVNGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAQQRLQAMDRDRIERG
Ga0184623_101282641	3300018056	Groundwater Sediment	MSENEVRIIDIDGHVREADDLWEKYLESPFRSRAPKVEKVANGQQLFRLEGERHHRRPDETPFRIKEDGSPANENRHLATD
Ga0187773_100482993	3300018064	Tropical Peatland	MAENEIRIIDIDGHVREADDLFEKYLEAPFRGRAPKVEKVPNGQQLFRLEGERHHRRPDETPFRIKDDGSPANENRHLATNP
Ga0184618_101262561	3300018071	Groundwater Sediment	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLENDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQRLQAMDRDRIERGLLFP
Ga0184635_103125921	3300018072	Groundwater Sediment	MPDDGIRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFRIKDDGSPANENRHLATNPKQRLVAMDRDRIERGL
Ga0190271_118876261	3300018481	Soil	MADKEMRIIDIDGHVREADDLFEKYLETPFRARAPKVEKVANGQLLFKLEGERHHRRSDESPFRVKDDGSPVNEGRHLATNPKQRLEA
Ga0194121_102123331	3300020200	Freshwater Lake	MADNSIRIVDIDGHVREADDLFEKYLEAPYRDRAPKIEKVANGQLLFKLEGNMHHRRPDESPFRIKTDGTPVNEGRHLATNPKQRLQA
Ga0206227_10169991	3300021063	Deep Subsurface Sediment	MSENAIRIIDVDGHVREADDLFEKYLEAPFHARAPQIEKVANGQLLFCLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQR
Ga0206227_11293372	3300021063	Deep Subsurface Sediment	MSENGMRIIDLDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRFKEDGSPVNEQRHLATNPKQRLQAMDRDRIERGLLFPSAGLYLT
Ga0210380_102826021	3300021082	Groundwater Sediment	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQRLQAMDRDRIERGLL
Ga0210380_103713971	3300021082	Groundwater Sediment	MTDNHIRIIDIDGHVREADDLFEKYLETPFRARAPKVEKVANGQLLFKLEGERHHRRPDESPFRVKDDGSPVNEGRHLATNPKQRLEAM
Ga0210339_10262541	3300021332	Estuarine	MTDNSIRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQLLFKLEGERHHRRPDESPFRVKDDGSPVNEGRHLATNPKQRLEAMDRDRIERGRQALGLEFRADAEH
Ga0210143_10985681	3300025792	Natural And Restored Wetlands	MTGTGIRIIDVDGHVREADDLFEKYLEAPFRARAPKIEQVANGQLLFRLEGDRHHRRPDETPFRIKEDGTPVNENRHLATDP
Ga0207688_104699263	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQE
Ga0207647_104067892	3300025904	Corn Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRTPRVEKVANGQLLFRLEGERHHRRPDETPFRVKEDGSPVNEN
Ga0207643_109106162	3300025908	Miscanthus Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAQQR
Ga0207660_105238671	3300025917	Corn Rhizosphere	MSDREVRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQMLFRLEGDRHHRRPDETPFRVKEDGAEANENRHLATNPKQRLAAMDRDRIERGLLFPSAGLYLTSVEEEA
Ga0207701_110949891	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDGSPVNEQRHLATNPKQRLQAMDRDRIERGLLFPSAGLYL
Ga0207689_116256472	3300025942	Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVERVANGQLLFRLEGERHHRRPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGRALHHVG
Ga0207679_118040021	3300025945	Corn Rhizosphere	MSDQAIRVIDIDGHVREADDLWERYLEQPFRARAPKIERVANGQLLFLLEGKRHHRKPDETPFRLKDDGTPVNEHRELATDPRA
Ga0210067_10184321	3300025947	Natural And Restored Wetlands	MADNGIRIIDIDGHVREADDLFEKYLEAPFRDRVPKIEKVANGQLLFRLEGERHHRRPDESPFRIKTDGSPVNEGRHLATNPKQR
Ga0207651_102500742	3300025960	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNENRHLATDPKQRLAAMNRDRIERGLLFPSAGLYLPSVQEDAYAAALCRA
Ga0208420_10092851	3300026028	Natural And Restored Wetlands	MTGTGIRIIDVDGHVREADDLFEKYLEAPFRARAPKIEQVANGQLLFRLEGDRHHRRPDETPFRIKEDGTPVNENRHLATDPKD
Ga0207641_110222192	3300026088	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNEN
Ga0207648_111240931	3300026089	Miscanthus Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDQPPRVEKVANGQLLFRFEGERHHRKPDETPFRVKEDGSPVKENRHLATDPKQRLAAMNR
Ga0207675_1007447151	3300026118	Switchgrass Rhizosphere	MPDLRIIDIDGHVREADDLFEKYLEAPFRDRAPRVEKVANGQLLFRLEGERHHRKPDETPFRVKEDGSPVNEN
Ga0207675_1017211101	3300026118	Switchgrass Rhizosphere	MPNNDMRIIDFDGHVREADDLFEKYLEAPFRARAPQIEKVANGQLLFRLEGERHHRRPDESPFRIKEDGSPVNENRHLATNAQQRLQAMDRDRIERGLLFPSAGLYLPSVLE
Ga0209055_10886382	3300026309	Soil	MPEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPV
Ga0209152_103523232	3300026325	Soil	MPEHAIRVIDIDGHVREADDLWQHYLEPPFRIRAPRIDKVPNGQLLFLLEGKRHHRKPDESPFRIKSDDSPVNEHRDLATDP
Ga0256867_100923001	3300026535	Soil	MRVIDIDGHVREADDLWERYLEAPFRARAPKIERVANGQLLFRLEGDRHHRRPDESPFRVKEDGSPVNEHRHLATN
Ga0209982_10710632	3300027552	Arabidopsis Thaliana Rhizosphere	MPEDMMRIIDIDGHVREADDLFEKYLEPAFRARAPKVERVSNGQLLFRLEGDRHHRRPDESPFRVKADGS
Ga0207981_11095752	3300027560	Soil	VHVREADDLFEKYLEPPFRAHAPKIEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATNPKQR
Ga0209998_100568963	3300027717	Arabidopsis Thaliana Rhizosphere	MPEDMMRIIDIDGHVREADDLFEKYLEPAFRARAPKVERVSNGQLLFRLEGDRHHRRPDESPFRVKADGSPVNENRHLATDPKDRLK
Ga0209074_103969391	3300027787	Agricultural Soil	MDPRIIDIDGHVREADDLFEKYLEAPFQNRAPRVEKVANGQLLFRLEGDRHHRKPDESPFRVKDDGAPVNENRHLATDPKQRLAAMDRDRIERGLLFPSAGL
Ga0207428_103966661	3300027907	Populus Rhizosphere	MPNDGVRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFRIKD
Ga0209382_103313921	3300027909	Populus Rhizosphere	MAENEIRIIDFDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDETPFRIKDDGSPVNEQ
Ga0209382_118904251	3300027909	Populus Rhizosphere	MRIIDVDGHVREADDLFEKYLEAPFRARAPKIEKVANGQLLFRLEDDRHHRRPDESPFRIKDDDSPVNEQRHLA
Ga0256864_12492301	3300027964	Soil	MSENGMRIIDIDGHVREADDLFEKYLEPPFRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRVKEDGSPVNENRHLATDPKDRLKAMD
Ga0268265_116906502	3300028380	Switchgrass Rhizosphere	MPDDGIRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDESPFPIKDDGSPANENRHLATHPKQRLVAMDRDRIERGLLFPS
Ga0307503_102270472	3300028802	Soil	MPDDGIRIIDIDAHVREADDLFEKYLEAPYRARAPKVEKVANGQMLFRLEGERHHRRPDETPFPIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFPSAGLYLPSVQEEGYAA
Ga0222749_106928161	3300029636	Soil	MAENSMRVIDIDGHVREADDLWERYLESPFRARAPKIEKVANGQLLFLLEGKRHHRKPDESPFQTKSDNSPVNEH
Ga0299906_106576241	3300030606	Soil	MRVIDIDGHVREADDLWERYLEAPFRARAPKIEQVANGQLLFRLEGKRHHRRPDESPFPVKEDGSP
Ga0302046_101815692	3300030620	Soil	MSENGIRIIDIDGHVREADDLFEKYLEAPFRARAPKVEKVANGQLLFRLEGDRHHRRPDESPFRVKEDGSPVNEHRHLA
Ga0307499_102464772	3300031184	Soil	MPDDGIRIIDIDGHVREADDLFEKYLEAPDRARAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFP
Ga0307500_100406581	3300031198	Soil	MQDDGIRIIDIDGHVREADDLFEKYLEAPYRARAPKVEKVANGQQLFRLEGERHHRRPDETPFPIKDDGSPANENRHLATNPKQRLVAMDRDRIERGLLFPSA
Ga0310904_105581951	3300031854	Soil	MADNGIHIIDIDGHVREADDLFEKYLEPPFRAHAPKIEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATNPKQRLEAMDRDRIDRGLLFPS
Ga0306919_104733052	3300031879	Soil	MPELRIIDIDGHVREADDLFEKYLEAPFRDRAPRVEKVANGQLLFRLEGDRHHRRPDETPFRVKEHGSPANENRHLATNPKQRLAAMDRDRIDRG
Ga0306925_110646082	3300031890	Soil	MPELRIIDIDGHVREADDLFEKYLEAPFRDRAPRVEKVANGQLLFRLEGDRHHRRPDETPFRVKEHGSPANENRHLATNPKQRLAAMD
Ga0307406_117189471	3300031901	Rhizosphere	MTETAIRIIDIDGHVREADDLFEKYLEAPYRERAPKVEKVANGQLLFRLEGDRHHRRPDESPFRIKTDGSPVNEGRHLATHP
Ga0310900_108937742	3300031908	Soil	MPEHAVRIIDIDGHVREADDLFERYLEAPYRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRCKEDGSPVNEHRHLATEPKDRLKAMDRDGIERGLLFP
Ga0310916_102484672	3300031942	Soil	MAENSIRVIDIDGHVREADDLWERYLEAPFRSRAPKIERVPNGQLLFLLEGNRHHRKPDETPFRIKPDDSPVNEHRDLATEPRERLKDMD
Ga0310902_110279122	3300032012	Soil	MPEHAVRIIDIDGHVREADDLFERYLEAPYRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRCKEDGSPVNEHRHLATEPKDRLKAMDRDGIERGLLFPSAG
Ga0310890_110075061	3300032075	Soil	MSDQAIRVIDIDGHVREADDLWERYLEQPFRARAPKIERVANGQLLFLLEGKRHHRKPDETPFRLKDDGTPVNEHRELATD
Ga0307471_1013346961	3300032180	Hardwood Forest Soil	MPENEIRIIDFDGHVREADDLFEKYLEPPFRARAPKIEKVANGQLLFRLEGDRHHRRPDESPFRVKADGSPAN
Ga0310914_107760791	3300033289	Soil	MPELRIIDIDGHVREADDLFEKYLEAPFRDRAPRVEKVANGQLLFRLEGDRHHRRPDETPFRVKEHGS
Ga0310811_105179381	3300033475	Soil	MPDLRIIDIDGHVREADDLFEKYLEAPFQDRAPRVEKVANGQLLFRLEGDRHHRKPDESPFRVKEDGAPV
Ga0364941_089171_448_732	3300034417	Sediment	MTDNHIRIIDIDGHVREADDLFEKYLETPFRARAPKVEKVANGQLLFKLEGERHHRRPDESPFRVKDDGSPVNEGRHLATNPKQRLEAMDRDRIE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences