Metagenome Family F050656

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050656
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	51 residues
Representative Sequence	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNRLKVLFA
Number of Associated Samples	70
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.69 %
% of genes near scaffold ends (potentially truncated)	17.93 %
% of genes from short scaffolds (< 2000 bps)	85.52 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.517 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (23.448 % of family members)
Environment Ontology (ENVO)	Unclassified (28.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.655 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.96% β-sheet: 0.00% Coil/Unstructured: 43.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF10282	Lactonase	3.45
PF00672	HAMP	1.38
PF02518	HATPase_c	1.38
PF00072	Response_reg	0.69
PF13458	Peripla_BP_6	0.69
PF01094	ANF_receptor	0.69
PF00534	Glycos_transf_1	0.69
PF04075	F420H2_quin_red	0.69
PF01569	PAP2	0.69
PF13602	ADH_zinc_N_2	0.69
PF05899	Cupin_3	0.69
PF00805	Pentapeptide	0.69
PF14947	HTH_45	0.69
PF03741	TerC	0.69
PF07883	Cupin_2	0.69
PF14026	DUF4242	0.69
PF07690	MFS_1	0.69
PF11387	DUF2795	0.69
PF10604	Polyketide_cyc2	0.69
PF07366	SnoaL	0.69
PF00561	Abhydrolase_1	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0683	ABC-type branched-chain amino acid transport system, periplasmic component	Amino acid transport and metabolism [E]	0.69
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.69
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
All Organisms	root	All Organisms	34.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
cellular organisms	root	All Organisms → cellular organisms	34.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	33.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	15.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	15.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	13.79 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.69 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	13.79 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.69 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	13.79 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.69 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	10.34 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	2.76 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.69 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	4.14 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2.76 %
Candidatus Nitrososphaera gargensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis	0.69 %
Nitrososphaera viennensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Nitrososphaera viennensis	0.69 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.69 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.52 %
Nitrososphaera sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	4.14 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2.76 %
Nitrososphaera viennensis EN76	strain	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Nitrososphaera viennensis → Nitrososphaera viennensis EN76	0.69 %
Candidatus Nitrososphaera gargensis Ga9.2	isolate	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	0.69 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.69 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_3556_length_1889_cov_9.510852	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Nitrososphaera viennensis → Nitrososphaera viennensis EN76	1921	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0775804	Not Available	2231	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2235545	Not Available	943	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14275980	Not Available	607	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14276300	Not Available	585	Open in IMG/M
3300000787\|JGI11643J11755_11312694	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	544	Open in IMG/M
3300003267\|soilL1_10073602	Not Available	1800	Open in IMG/M
3300003267\|soilL1_10099493	All Organisms → cellular organisms → Archaea	1209	Open in IMG/M
3300003321\|soilH1_10279352	Not Available	1274	Open in IMG/M
3300003321\|soilH1_10396978	Not Available	1538	Open in IMG/M
3300003324\|soilH2_10172171	Not Available	1606	Open in IMG/M
3300004643\|Ga0062591_101251262	Not Available	726	Open in IMG/M
3300005562\|Ga0058697_10014504	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	2670	Open in IMG/M
3300005562\|Ga0058697_10020350	All Organisms → cellular organisms → Archaea	2316	Open in IMG/M
3300005562\|Ga0058697_10085217	Not Available	1283	Open in IMG/M
3300005562\|Ga0058697_10240026	Not Available	839	Open in IMG/M
3300005562\|Ga0058697_10343339	Not Available	725	Open in IMG/M
3300005562\|Ga0058697_10430454	Not Available	660	Open in IMG/M
3300005562\|Ga0058697_10784598	Not Available	514	Open in IMG/M
3300005981\|Ga0081538_10010444	All Organisms → cellular organisms → Archaea	7613	Open in IMG/M
3300005981\|Ga0081538_10069508	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	1950	Open in IMG/M
3300005981\|Ga0081538_10084554	All Organisms → cellular organisms → Archaea	1671	Open in IMG/M
3300005981\|Ga0081538_10134057	Not Available	1157	Open in IMG/M
3300005981\|Ga0081538_10261074	Not Available	654	Open in IMG/M
3300006049\|Ga0075417_10036000	All Organisms → cellular organisms → Archaea	2076	Open in IMG/M
3300006169\|Ga0082029_1041683	Not Available	1009	Open in IMG/M
3300006169\|Ga0082029_1142082	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	1385	Open in IMG/M
3300006169\|Ga0082029_1144357	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1357	Open in IMG/M
3300006169\|Ga0082029_1176685	Not Available	609	Open in IMG/M
3300006169\|Ga0082029_1266506	All Organisms → cellular organisms → Archaea	1637	Open in IMG/M
3300006169\|Ga0082029_1798342	Not Available	516	Open in IMG/M
3300006844\|Ga0075428_100729921	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1055	Open in IMG/M
3300006844\|Ga0075428_100798144	Not Available	1003	Open in IMG/M
3300006845\|Ga0075421_100188320	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2562	Open in IMG/M
3300006845\|Ga0075421_102653752	Not Available	519	Open in IMG/M
3300006846\|Ga0075430_101081257	Not Available	661	Open in IMG/M
3300006853\|Ga0075420_101150666	Not Available	667	Open in IMG/M
3300006876\|Ga0079217_10913130	Not Available	628	Open in IMG/M
3300006894\|Ga0079215_11734295	Not Available	500	Open in IMG/M
3300006918\|Ga0079216_10807617	Not Available	690	Open in IMG/M
3300007004\|Ga0079218_10024034	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	3397	Open in IMG/M
3300007004\|Ga0079218_13769768	Not Available	515	Open in IMG/M
3300007790\|Ga0105679_10154030	All Organisms → cellular organisms → Archaea	1075	Open in IMG/M
3300007790\|Ga0105679_10287419	All Organisms → cellular organisms → Archaea	1135	Open in IMG/M
3300007790\|Ga0105679_10485184	Not Available	1200	Open in IMG/M
3300007790\|Ga0105679_10681008	Not Available	1064	Open in IMG/M
3300007790\|Ga0105679_10748583	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1349	Open in IMG/M
3300009081\|Ga0105098_10443123	Not Available	652	Open in IMG/M
3300009094\|Ga0111539_10172049	Not Available	2530	Open in IMG/M
3300009094\|Ga0111539_10372740	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis → Candidatus Nitrososphaera gargensis Ga9.2	1662	Open in IMG/M
3300009094\|Ga0111539_13550586	Not Available	500	Open in IMG/M
3300009100\|Ga0075418_10855077	Not Available	983	Open in IMG/M
3300009100\|Ga0075418_12528648	Not Available	560	Open in IMG/M
3300009147\|Ga0114129_10714091	Not Available	1287	Open in IMG/M
3300009156\|Ga0111538_10933950	Not Available	1098	Open in IMG/M
3300009789\|Ga0126307_10000738	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	21478	Open in IMG/M
3300009789\|Ga0126307_10068194	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2797	Open in IMG/M
3300009789\|Ga0126307_10131793	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1996	Open in IMG/M
3300009789\|Ga0126307_10238074	All Organisms → cellular organisms → Archaea	1463	Open in IMG/M
3300009789\|Ga0126307_10249818	All Organisms → cellular organisms → Archaea	1426	Open in IMG/M
3300009789\|Ga0126307_10570548	Not Available	914	Open in IMG/M
3300009840\|Ga0126313_10733084	Not Available	802	Open in IMG/M
3300010036\|Ga0126305_10221989	Not Available	1205	Open in IMG/M
3300010037\|Ga0126304_10120450	Not Available	1676	Open in IMG/M
3300010037\|Ga0126304_10324875	Not Available	1021	Open in IMG/M
3300010038\|Ga0126315_10273258	All Organisms → cellular organisms → Archaea	1036	Open in IMG/M
3300010038\|Ga0126315_10371498	All Organisms → cellular organisms → Archaea	894	Open in IMG/M
3300010038\|Ga0126315_10427024	All Organisms → cellular organisms → Archaea	836	Open in IMG/M
3300010038\|Ga0126315_10754413	Not Available	638	Open in IMG/M
3300010039\|Ga0126309_10086405	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	1587	Open in IMG/M
3300010039\|Ga0126309_10100682	Not Available	1487	Open in IMG/M
3300010039\|Ga0126309_10140667	Not Available	1287	Open in IMG/M
3300010039\|Ga0126309_10199153	Not Available	1108	Open in IMG/M
3300010039\|Ga0126309_10859884	Not Available	597	Open in IMG/M
3300010040\|Ga0126308_10030648	All Organisms → cellular organisms → Archaea	2999	Open in IMG/M
3300010040\|Ga0126308_10046421	All Organisms → cellular organisms → Archaea	2505	Open in IMG/M
3300010040\|Ga0126308_10284904	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1082	Open in IMG/M
3300010040\|Ga0126308_11352252	Not Available	506	Open in IMG/M
3300010042\|Ga0126314_10949386	Not Available	637	Open in IMG/M
3300010042\|Ga0126314_11300646	Not Available	545	Open in IMG/M
3300010044\|Ga0126310_10048867	Not Available	2337	Open in IMG/M
3300010044\|Ga0126310_10117786	Not Available	1640	Open in IMG/M
3300010044\|Ga0126310_10673086	Not Available	781	Open in IMG/M
3300010044\|Ga0126310_11607957	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	537	Open in IMG/M
3300010045\|Ga0126311_10159808	Not Available	1613	Open in IMG/M
3300010045\|Ga0126311_10500323	Not Available	950	Open in IMG/M
3300010045\|Ga0126311_11700101	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	533	Open in IMG/M
3300010047\|Ga0126382_10565382	Not Available	928	Open in IMG/M
3300010166\|Ga0126306_10078670	Not Available	2345	Open in IMG/M
3300010166\|Ga0126306_10407507	Not Available	1064	Open in IMG/M
3300012948\|Ga0126375_10686264	Not Available	795	Open in IMG/M
3300014487\|Ga0182000_10277790	Not Available	686	Open in IMG/M
3300014488\|Ga0182001_10154114	Not Available	788	Open in IMG/M
3300015371\|Ga0132258_13677837	Not Available	1047	Open in IMG/M
3300018432\|Ga0190275_10898568	Not Available	954	Open in IMG/M
3300018465\|Ga0190269_11277202	Not Available	584	Open in IMG/M
3300018466\|Ga0190268_10476858	Not Available	837	Open in IMG/M
3300018466\|Ga0190268_11531465	Not Available	582	Open in IMG/M
3300018875\|Ga0193608_1014534	Not Available	1682	Open in IMG/M
3300018910\|Ga0193598_1090838	Not Available	707	Open in IMG/M
3300018933\|Ga0193614_1045929	Not Available	1234	Open in IMG/M
3300018933\|Ga0193614_1050106	Not Available	1179	Open in IMG/M
3300018933\|Ga0193614_1103886	All Organisms → cellular organisms → Archaea	790	Open in IMG/M
3300019132\|Ga0193604_1041449	Not Available	659	Open in IMG/M
3300021184\|Ga0196959_10061175	Not Available	802	Open in IMG/M
3300024430\|Ga0196962_10140055	Not Available	764	Open in IMG/M
3300027636\|Ga0214469_1146631	Not Available	667	Open in IMG/M
3300027691\|Ga0209485_1011716	All Organisms → cellular organisms → Archaea	1879	Open in IMG/M
3300027873\|Ga0209814_10012838	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	3321	Open in IMG/M
3300030006\|Ga0299907_11022805	Not Available	606	Open in IMG/M
3300030496\|Ga0268240_10029590	Not Available	1092	Open in IMG/M
3300030510\|Ga0268243_1185005	Not Available	515	Open in IMG/M
3300031228\|Ga0299914_10005941	All Organisms → cellular organisms → Archaea	8994	Open in IMG/M
3300031228\|Ga0299914_10261244	All Organisms → cellular organisms → Archaea	1530	Open in IMG/M
3300031548\|Ga0307408_100006321	All Organisms → cellular organisms → Archaea	7864	Open in IMG/M
3300031548\|Ga0307408_100009743	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	6332	Open in IMG/M
3300031548\|Ga0307408_100196738	All Organisms → cellular organisms → Archaea	1628	Open in IMG/M
3300031548\|Ga0307408_100429959	All Organisms → cellular organisms → Archaea	1141	Open in IMG/M
3300031548\|Ga0307408_101340690	Not Available	672	Open in IMG/M
3300031731\|Ga0307405_10249417	Not Available	1320	Open in IMG/M
3300031731\|Ga0307405_12059175	Not Available	512	Open in IMG/M
3300031824\|Ga0307413_11951101	Not Available	528	Open in IMG/M
3300031852\|Ga0307410_10121549	All Organisms → cellular organisms → Archaea	1905	Open in IMG/M
3300031852\|Ga0307410_10247981	Not Available	1383	Open in IMG/M
3300031852\|Ga0307410_11047689	Not Available	705	Open in IMG/M
3300031901\|Ga0307406_10731845	Not Available	829	Open in IMG/M
3300031901\|Ga0307406_11487019	Not Available	596	Open in IMG/M
3300031995\|Ga0307409_100020416	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4514	Open in IMG/M
3300031995\|Ga0307409_100050223	All Organisms → cellular organisms → Bacteria	3184	Open in IMG/M
3300031995\|Ga0307409_101151406	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	798	Open in IMG/M
3300031995\|Ga0307409_101818434	Not Available	638	Open in IMG/M
3300032002\|Ga0307416_100052774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	3257	Open in IMG/M
3300032002\|Ga0307416_100618106	All Organisms → cellular organisms → Archaea	1165	Open in IMG/M
3300032002\|Ga0307416_102580974	Not Available	606	Open in IMG/M
3300032005\|Ga0307411_10371082	Not Available	1174	Open in IMG/M
3300032126\|Ga0307415_101764640	Not Available	598	Open in IMG/M
3300032159\|Ga0268251_10032825	All Organisms → cellular organisms → Archaea	1620	Open in IMG/M
3300032159\|Ga0268251_10138938	Not Available	905	Open in IMG/M
3300032159\|Ga0268251_10150280	Not Available	877	Open in IMG/M
3300032159\|Ga0268251_10250424	Not Available	716	Open in IMG/M
3300032159\|Ga0268251_10447582	Not Available	568	Open in IMG/M
3300032159\|Ga0268251_10603863	Not Available	505	Open in IMG/M
3300034143\|Ga0334961_051523	Not Available	712	Open in IMG/M
3300034143\|Ga0334961_071111	Not Available	607	Open in IMG/M
3300034172\|Ga0334913_075335	All Organisms → cellular organisms → Archaea	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.38%
Host-Associated	Host-Associated	38.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.69%
Plants	Host-Associated → Plants	38.62%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.52%
Phylloplane	Host-Associated → Plants → Phylloplane	8.97%
Roots	Host-Associated → Plants → Roots	3.45%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.52%
Sand	Environmental → Terrestrial → Soil → Sand	8.97%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	8.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.52%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	8.97%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	8.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	3.45%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.07%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	23.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	15.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.34%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	8.97%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.45%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01717220	2140918013	Soil	MLAAYCEVMNLAEAGMLVAVGFVPTLIALEVAYRRGRAIGRHGEISSLAHT
ICChiseqgaiiDRAFT_07758042	3300000033	Soil	MLAAYCEVMNLAEAGMLVAVGFVPTLIALEVAYRRGRAIGRHGEISSLAHT*
ICChiseqgaiiDRAFT_22355451	3300000033	Soil	MXXGEAXXXXAVGFVPTLIAXELVYRMGRAIGKRGEIPSLVQRNNKLKTLFAGRIKR*
ICChiseqgaiiFebDRAFT_142759801	3300000363	Soil	MNLGEAGMLAAVGFVPTLIALELVYRMGRAIGERGEISLLA*
ICChiseqgaiiFebDRAFT_142763001	3300000363	Soil	MNLGEAGMLAAVGFVPTLIALELVYRMGRAIGKRGEIPSLVQRNNKLKTLFAGRIKR*
JGI11643J11755_113126941	3300000787	Soil	MNPGEVGMFLAIGFVPTLIALEMTYRMGRAIGKRGEIPSLAQ
soilL1_100736023	3300003267	Sugarcane Root And Bulk Soil	MIKDMNPGEAAMFLAIGFVPTLVALEMTYRMGRAIGKRGEVSSLAEHNKLK
soilL1_100994932	3300003267	Sugarcane Root And Bulk Soil	MNLGEAGMFVAVGFVPTLIALEMIYRMGKAIGRRGEISSTLAQHNSKLGKLFA*
soilH1_102793521	3300003321	Sugarcane Root And Bulk Soil	MNLGEAAMFLTVGFVPTLIALEMVYRMGRSIGRRGEISSLVQHNSKRSKLFA*
soilH1_103969784	3300003321	Sugarcane Root And Bulk Soil	MNLGEAVILMAIGFVPTLIALELVYRMGRAIGRRGEISSPASHNRLRKLFA*
soilH2_101721712	3300003324	Sugarcane Root And Bulk Soil	MIKDMNPGEAAMFLAIGFVPTLVALEMVYKMGRAIGKRGEVSSLAEHSKLKMLFS*
Ga0062591_1012512621	3300004643	Soil	MNPGEAATFLAVGFVPTLIALELVYRMGRAIGKRGEIPSLVQHNNKLKTLFAGRIKR*
Ga0058697_100145043	3300005562	Agave	MNLGEAGMFVAVGFVPTLIVLEMVYRMGRAIGRRGEISSLHKTIIS*
Ga0058697_100203504	3300005562	Agave	MNLAEAGIFVAVGFVPTWIVLEMVYRMGRAIGKRGEISSLHKTIVS*
Ga0058697_100852171	3300005562	Agave	LAVGFVPTLIALEMVYRMGRAIGKRGEIPSLVQHNNKLKMLFA*
Ga0058697_102400261	3300005562	Agave	MYVAVGFVPTLVALEIVFRMGRAIGRRGEISSLLQNKLR*
Ga0058697_103433391	3300005562	Agave	MNLGEAGMFVAVGFVPTLIALELVYRMGRAIGRRGEISSLARHNSKLRMLFA*
Ga0058697_104304542	3300005562	Agave	MNPGEAAMFLAVGFVPTLIALEMVYRMGRVTGKRGEIQSLANSNKLGRRLA*
Ga0058697_107845982	3300005562	Agave	MNPGEAAMFLAIGFIPTLIALEMVYRMGRAIGKRGEIPSLVQRNNKLKMLFAERIKR*
Ga0081538_100104448	3300005981	Tabebuia Heterophylla Rhizosphere	MNIGEVGMFVAVGFVPTLIALEMVYRMGKAIGRRGEISSLA*
Ga0081538_100695085	3300005981	Tabebuia Heterophylla Rhizosphere	MNPGEAAMFLAVGFVPTLIALEIVYRMGRAIGKRGEIPSLEHHNKLKMLFA*
Ga0081538_100845542	3300005981	Tabebuia Heterophylla Rhizosphere	MNLGEATMFLVVGFAPTLFVLELVYRMGKAIGRRGEVPSLA*
Ga0081538_101340572	3300005981	Tabebuia Heterophylla Rhizosphere	MNFGEAAMFLAVGFVPTLIALEMVYRMGRAIGRRGEISSLAQHNGKLSKLFA*
Ga0081538_102610741	3300005981	Tabebuia Heterophylla Rhizosphere	MNIGEAGMFVAVGFVPTLIALEMVYRMGRAIGRRGDAPSVAQNHNK
Ga0075417_100360003	3300006049	Populus Rhizosphere	MNIGEAAMFVAVGFVPTLIALEMVYRMGRAIGRRGEAPLLAQNHNKLRKLFA*
Ga0082029_10416832	3300006169	Termite Nest	MNFGEAAMFLAVGFVPTLIVLEMVYRMGKAIGRRGEIPSLA*
Ga0082029_11420824	3300006169	Termite Nest	MNLAEAGIFVAVGFVPTWIVLEMVYRMGRAIGKRGEISSLHKTIIR*
Ga0082029_11443572	3300006169	Termite Nest	MFVAVGFIPTLIALELVYRMGKAIGRRGEFLSIHKSIIR*
Ga0082029_11766852	3300006169	Termite Nest	MNIGEVGVFVAVGFVPTLIALEMVYRMGKAIGRRGEAPLLAQNHNKLRKLFA*
Ga0082029_12665062	3300006169	Termite Nest	MNFGEAAMFLAVGFIPTLIALELVYRMGRAIGRRGEAPLLGQNHNKLRKLFA*
Ga0082029_17983422	3300006169	Termite Nest	MNFGEAAMFLAVGFIPTLIALEMVYRMGKAIERRGEISSLAHHNSKLSYLLKRYERG*
Ga0075428_1007299213	3300006844	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIAFELVYRMGRAIGRRGEISSLAAQHHNYKLRMLFAEKV*
Ga0075428_1007981441	3300006844	Populus Rhizosphere	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNKLKVLFA*
Ga0075421_1001883201	3300006845	Populus Rhizosphere	MNLVEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNKLKVLFA*
Ga0075421_1026537522	3300006845	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIALELVYRMGRAIGRRGEISSLAAQHHNSKLRMLFAEKV*
Ga0075430_1010812572	3300006846	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIALELAYRMGRAIGRRGEISSLAAQHHNSKLRMLFAEKV*
Ga0075420_1011506662	3300006853	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIALELVYRMGRAIGRRGEISSLAAQHHNYKLRMLFAEKV*
Ga0079217_109131301	3300006876	Agricultural Soil	MNLGEAATFLAIGFVPTLVALELVYRMGRAIGTRREISSLVEHNKLRTLFP*
Ga0079215_117342951	3300006894	Agricultural Soil	MLAAYCEVMNLAEAGMLVAVGFVPTLIALEVAYRRGRAIGRRGEISSLAHT*
Ga0079216_108076171	3300006918	Agricultural Soil	VAVGFIPTLIALELVYRMGRAIGRRGEISSLAAQHHNSKLRMLFAEK
Ga0079218_100240341	3300007004	Agricultural Soil	MNLGEAGMFVAVGFIPTLIALELVYRMGRAVGRRGEISSLAAQ
Ga0079218_137697681	3300007004	Agricultural Soil	MNFVEATMFVAVGFIPTLIALELVYRMGRAIGRRGEISSLAQHHNKLRMLFA*
Ga0105679_101540302	3300007790	Soil	MNLGEAATLLAIGFVPTLLALELIYIMGRPIGKRGEISSPKQHNSLRMLFA*
Ga0105679_102874191	3300007790	Soil	VLQYQHEVVNLGEASMFVAVGFIPTLIALEIVYRMGKAIGRRGEISQLAKGHNKLRMLFA
Ga0105679_104851842	3300007790	Soil	MNIGEAAMFIAIGFIPTLVALELVYRMGRAIGKRGEISSVVGHGRLKSLLA*
Ga0105679_106810082	3300007790	Soil	MNLGEAAMFMAIGFIPTLVALELAYRMGRAIGKRGEISSVVGHGRLKSLLA*
Ga0105679_107485831	3300007790	Soil	MNFVEAGMFVAVGFVPTLIALELTYRMGKAIGRRGEIASLAQHRNKLRMSFA*
Ga0105098_104431232	3300009081	Freshwater Sediment	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNKLKLLFA*
Ga0111539_101720492	3300009094	Populus Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEISSIVEHNKIKMPLA*
Ga0111539_103727402	3300009094	Populus Rhizosphere	MNPGEAATVLAVGFVPTLIALELVYRMGRAIGKRGEIPLLANRTKLVMRLA*
Ga0111539_135505861	3300009094	Populus Rhizosphere	MNLGEIGMFVSVGFIPTLIALELVYRMGKAIGKRGEISHMARHTLVS*
Ga0075418_108550771	3300009100	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIAFELVYRMGRAIGRRGEISSLAAQHHNYKLRM
Ga0075418_125286481	3300009100	Populus Rhizosphere	MFLAIGFIPTLIALEMTYRMGRAIGKRGEISSLAQHNNRLKILLHKK*
Ga0114129_107140911	3300009147	Populus Rhizosphere	MNLGEAGMFVAVGFIPTLIALELAYRMGRAIRRRGEISSLAAQHHNSKLRMLFAEKV*
Ga0111538_109339503	3300009156	Populus Rhizosphere	VPLVARYQGVNLIEAGMFVAVGFVPTLIALELVYRMGRAIGERGEISLLAQHNSKPKISFV*
Ga0126307_1000073817	3300009789	Serpentine Soil	MNFGEATVFVAVGFIPTLIALEIVYRMGRAIGRRGEILSLAQYHNKLRMLFA*
Ga0126307_100681942	3300009789	Serpentine Soil	MNPGEAGMFVAVGFVPTLIALEMAYRMGRVIGKRGEIPSLAQHKNKLKMLLFAQRIKR*
Ga0126307_101317932	3300009789	Serpentine Soil	MNPGEAGMFLAIGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNNRLKMLFA*
Ga0126307_102380742	3300009789	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAQHNKLRMLFA*
Ga0126307_102498182	3300009789	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSAQHNKLRMLFA*
Ga0126307_105705481	3300009789	Serpentine Soil	AVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQRNNKRKMLFAERIKQ*
Ga0126313_107330842	3300009840	Serpentine Soil	MNFSEAGMFVAVGFVPTLIALEMVYRMGRAIGKRGEISSLEQQYNKLKMLFA*
Ga0126305_102219891	3300010036	Serpentine Soil	MNPGEVGMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQRNNKRKMLFAERIKQ*
Ga0126304_101204502	3300010037	Serpentine Soil	MNPGEVGMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQRNNKRKMLFAERIKR*
Ga0126304_103248751	3300010037	Serpentine Soil	MNPGEVGIFLAVGFVPTLIALEMVYRMGRAIGKGGEIPSLANSNKPAIRLA*
Ga0126315_102732582	3300010038	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAEHNKLRMLFA*
Ga0126315_103714981	3300010038	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAQHNKLRMLFV*
Ga0126315_104270242	3300010038	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMIYRMGRAIGKRGEIPLPAQHNKLRMLFA*
Ga0126315_107544131	3300010038	Serpentine Soil	MNPGEVGMFLAIGFVPTLIALEMTYRMGRAIGKRGEIPSLAQHNNRLKILLHKK*
Ga0126309_100864053	3300010039	Serpentine Soil	MNFGEAGMFVVVGFVPTLIALELVYRMGRAIGKRGEISSLAQHNSKPKILFV*
Ga0126309_101006821	3300010039	Serpentine Soil	MNPGEAAIFLAVGFVPTLVALEMVYRMGRAIGKRGEIPSLVKSSKLGMRLA*
Ga0126309_101406672	3300010039	Serpentine Soil	MNFAEGTMFVAVGFIPTLIALEMVYRMGRAIGRRGEIPSLAQRHSKLKMLFA*
Ga0126309_101991531	3300010039	Serpentine Soil	MNPGEAALFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAQHNKLRMLFA*
Ga0126309_108598841	3300010039	Serpentine Soil	MNPGEAAMFLAIGFVPTLMALEMVYRMGRAIGKRGEIPSLAQHSNKLRMRLA*
Ga0126308_100306483	3300010040	Serpentine Soil	MNFGEATVFVAVGFIPTLIALEIVYRMGRAIGRRGEILSLAQHHNKLRMLFA*
Ga0126308_100464213	3300010040	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSVKHNKLRMLFA*
Ga0126308_102849041	3300010040	Serpentine Soil	MNPGEVGMFLAIGFVPTLIALEMTYRMGRAIGKRGEIPSLAQHNNRLKIFLHKK*
Ga0126308_113522521	3300010040	Serpentine Soil	MNPGEAAIFLTVGFVPTLVALEMVYRMGRAIGKRGEIPSLVKSNNRLGMRLA*
Ga0126314_109493862	3300010042	Serpentine Soil	YELGEATMFLAVGFVPTLFVLELVYRMGKAIGRGGEVPSLA*
Ga0126314_113006462	3300010042	Serpentine Soil	MNPGEAGMFLAIGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNNRLKLLFA*
Ga0126310_100488672	3300010044	Serpentine Soil	MNLGEAAIFLAVGFVPTLIALEMVYRMGKAIGMRGEISSVASHHK
Ga0126310_101177862	3300010044	Serpentine Soil	MNPSEAAMFLAIGFVPTLMALEMVYRMGRAIGKRGEIPSLAQHSNKLRMLLA*
Ga0126310_106730862	3300010044	Serpentine Soil	MFLAIGFVPTLIALEMTYRMGRAIGKRGEIPSLAQHNNRLKILLHKK*
Ga0126310_116079571	3300010044	Serpentine Soil	MNPGEVGMFLAIGFVPTLIALEMTYRMGRAIGKRGEIPSLAQHNNRLK
Ga0126311_101598082	3300010045	Serpentine Soil	EVGMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQRNNKRKMLFAERIKQ*
Ga0126311_105003232	3300010045	Serpentine Soil	MNLSEAALFLAVGFVPTLIALEMVYRMGKVIGRHGEISSLAHSNKLRMLFA*
Ga0126311_117001011	3300010045	Serpentine Soil	MNLGEAAIFLAVGFVPTLIALEMVYRMGKAIGRRGDISLLASHRKTLRMLFA*
Ga0126382_105653821	3300010047	Tropical Forest Soil	MNLGEAVILMAIGFVQSMIALELVYRMGRAIGRRGEISSPASHNRLRKLFA*
Ga0126306_100786702	3300010166	Serpentine Soil	MNPGEAAMFLAIGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNKIKMLFA*
Ga0126306_104075072	3300010166	Serpentine Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLVQRNKLKVLFA*
Ga0126375_106862641	3300012948	Tropical Forest Soil	VILMAIGFVPTLIALELVYRMGRAIGRRGEISSPASYNRLRKLFA*
Ga0182000_102777901	3300014487	Soil	MFFPINYFVMNLGEAAMYVAVGFVPTLVALEMVFRMGRAIGRRGEISSLLQNKLR*
Ga0182001_101541141	3300014488	Soil	MNLGEAAMFVAVGFVPTLIALEMVYRMGRAIGRRGEISSLLQNKLR*
Ga0132258_136778371	3300015371	Arabidopsis Rhizosphere	VMNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEISSIVEHNKIKMPLA*
Ga0190275_108985682	3300018432	Soil	MNLSEAAMFLAVGFVPTLIALELVYRMGRAIGRRGEISSLAHSNKLRMLFA
Ga0190269_112772022	3300018465	Soil	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNKLKVLFA
Ga0190268_104768582	3300018466	Soil	MNLGEAAMFVAVGFVPTLIVLEMVYRMGRAIGRRGEISSLAQHNSKIRSLFA
Ga0190268_115314651	3300018466	Soil	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHSKLKVLFA
Ga0193608_10145342	3300018875	Soil	MNLGEAAVFLAIGFVPTLIALEMVYRMGRAIGKRGEIPSAARHNRLSMLFA
Ga0193598_10908382	3300018910	Soil	MNLGEAAVFLAIGFVPTLIALEMVYRMGRAIGKRGEILSVVHRNRLRMLFA
Ga0193614_10459292	3300018933	Soil	MNLGEAAVFLAIGFLPTLIALEMVYRMGRAIGKRGEIPSAARHNRLSMLFA
Ga0193614_10501061	3300018933	Soil	MNLGEAAVFLAIGFVPTLIALEMVYRMGRAIGKRGEISSVVHHNRLRMLFA
Ga0193614_11038862	3300018933	Soil	MNLGEASMFVAVGFVPTLIALEMVYRMGKAIGRRGEISSSLAQHNSKLSKLFA
Ga0193604_10414491	3300019132	Soil	MNLGEAAVFLAIGFLPTLIALEMVYRMGRAIGKRGEIPSAARHNRLSML
Ga0196959_100611751	3300021184	Soil	MNIGEAAIFVAIGFIPTLVALELVYRMGRAIGKRGEISSVVGHGRLKSLFA
Ga0196962_101400552	3300024430	Soil	IFVAIGFIPTLVALELVYRMGRAIGKRGEISSVVGHGRLKSLFA
Ga0214469_11466311	3300027636	Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNRLKVLFA
Ga0209485_10117163	3300027691	Agricultural Soil	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQH
Ga0209814_100128381	3300027873	Populus Rhizosphere	MNIGEAAMFVAVGFVPTLIALEMVYRMGRAIGRRGEAPLLAQNHNKLRKLFA
Ga0299907_110228051	3300030006	Soil	MNLGEAGMFVAVGFIPTLIALELVYRMGRAIGRRGEISSLAAQHHNSKLRMLFAEKV
Ga0268240_100295902	3300030496	Soil	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEISSVVEHNKIKMPLA
Ga0268243_11850051	3300030510	Soil	MFFPINYFVMNLGEAAMYVAVGFVPTLVALEMVFRMGRAIGRRGEISSLLQNKLR
Ga0299914_100059419	3300031228	Soil	VAVGFIPTLIALELVYRMGRAIGRRGEISSLAAQHHNSKLRMLFAEKV
Ga0299914_102612442	3300031228	Soil	MNLGEAAIFLAVGFVPTLIALEMVYRMGRAIGRRGEISSLAQHNSKLSKLFA
Ga0307408_10000632112	3300031548	Rhizosphere	MLAAYCEVMNLAEAGMLVAVGFVPTLIALEVAYRRGRAIGRRGEISSLAHT
Ga0307408_1000097432	3300031548	Rhizosphere	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLARHNKLKVLFA
Ga0307408_1001967383	3300031548	Rhizosphere	MNLGEAATFLAVGFIPTLIALEMVYRMGRAIGKRGDIPSLAQHDSKLRMLFA
Ga0307408_1004299593	3300031548	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSAEHNKLRMLFA
Ga0307408_1013406901	3300031548	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAEHNMLRMLFA
Ga0307405_102494171	3300031731	Rhizosphere	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLSQHNKLKVLFA
Ga0307405_120591751	3300031731	Rhizosphere	MNAGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSAQHNKLRMLFA
Ga0307413_119511011	3300031824	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSVKHNKLRM
Ga0307410_101215492	3300031852	Rhizosphere	MNLGEAATFLAVGFIPTLIALEMVYRMGRAIGKRGEIPSLAQHNSKLRMLFA
Ga0307410_102479812	3300031852	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAQHNKLRMLFA
Ga0307410_110476892	3300031852	Rhizosphere	MNPGEAGMFVAVGFVPMLIALELVYRMGRAIGRRGEISSLAQHNSKIRMLFG
Ga0307406_107318452	3300031901	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMIYRMGRAIGKRGEIPLPAQHNKLRMLFA
Ga0307406_114870191	3300031901	Rhizosphere	MNPGEAAMLVAVGFVPTLIALEMVYRMGRAIGRRGEISSLAQHNSKLSKLFA
Ga0307409_1000204161	3300031995	Rhizosphere	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLSQHN
Ga0307409_1000502236	3300031995	Rhizosphere	AMLLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLVRHNKLKVLFA
Ga0307409_1011514062	3300031995	Rhizosphere	MNPGEVGMFLAVGFVPTLIALEMVYRMGRAIGKRG
Ga0307409_1018184341	3300031995	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAEHNKLRMLFA
Ga0307416_1000527742	3300032002	Rhizosphere	MNLGEATMFLAVGFVPTLFVLELVYRMGKAIGRRGEVPSLA
Ga0307416_1006181062	3300032002	Rhizosphere	MNPGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIRLSAQHNKLRMLFA
Ga0307416_1025809741	3300032002	Rhizosphere	MNPGEAAMLLAVGFVPTLIALEMVYRMGRAIGRRGEISSLAQHNSKLSKLFA
Ga0307411_103710823	3300032005	Rhizosphere	GEAATFLAVGFIPTLIALEMVYRMGRAIGKRGDIPSLAQHDSKLRMLFA
Ga0307415_1017646401	3300032126	Rhizosphere	MNPGEVGMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHNNKLKMLFG
Ga0268251_100328252	3300032159	Agave	MNLAEAGIFVAVGFVPTWIVLEMVYRMGRAIGKRGEISSLHKTIVS
Ga0268251_101389381	3300032159	Agave	MFFPINYFVMNLGEAAMYVAVGFVPTLVALEIVFRMGRAIGRRGEISSLLQNKLR
Ga0268251_101502802	3300032159	Agave	MNLGEAGMFVAVGFVPTLIVLEMVYRMGRAIGRRGEISSLHKTIIS
Ga0268251_102504243	3300032159	Agave	PGEAAMFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLVQHNNKLKMLFA
Ga0268251_104475821	3300032159	Agave	MNPGEAATFLAVGFVPTLIALEMVYRMGRAIGKRGEIPSLAQHDKLKMLFA
Ga0268251_106038631	3300032159	Agave	MNLGEAGMFVAVGFVPTLIALELVYRMGRAIGRRGEISSLARHNSKLRMLLA
Ga0334961_051523_488_646	3300034143	Sub-Biocrust Soil	MNLGETAIFLAVGFVPTLIALEMVYRMGKAIGRRGEISSLAQQHKTRRMLFA
Ga0334961_071111_214_369	3300034143	Sub-Biocrust Soil	MNLSEAAIFLATGFVPTLIALEMVYRMGRAIGKRGEISSLVQHNKLKLLFA
Ga0334913_075335_23_178	3300034172	Sub-Biocrust Soil	MNPGEAAIFLAVGFVPTLIALEMVYRMGRAIGKRGEIPLPAQHNKLRMLFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences