Metagenome / Metatranscriptome Family F050967

Basic Information
Family ID	F050967
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	48 residues
Representative Sequence	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCEIHDVESGSA
Number of Associated Samples	120
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.25 %
% of genes near scaffold ends (potentially truncated)	20.14 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (90.278 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (30.556 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.18% Coil/Unstructured: 81.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00296	Bac_luciferase	27.78
PF07883	Cupin_2	12.50
PF13343	SBP_bac_6	3.47
PF08240	ADH_N	2.78
PF01063	Aminotran_4	2.08
PF07969	Amidohydro_3	2.08
PF01243	Putative_PNPOx	1.39
PF03446	NAD_binding_2	1.39
PF04909	Amidohydro_2	1.39
PF07690	MFS_1	1.39
PF02653	BPD_transp_2	0.69
PF02515	CoA_transf_3	0.69
PF00561	Abhydrolase_1	0.69
PF14833	NAD_binding_11	0.69
PF14691	Fer4_20	0.69
PF01113	DapB_N	0.69
PF05015	HigB-like_toxin	0.69
PF09084	NMT1	0.69
PF00596	Aldolase_II	0.69
PF00378	ECH_1	0.69
PF12706	Lactamase_B_2	0.69
PF01061	ABC2_membrane	0.69
PF16113	ECH_2	0.69
PF01547	SBP_bac_1	0.69
PF12697	Abhydrolase_6	0.69
PF03773	ArsP_1	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	27.78
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	4.17
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	0.69
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.69
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.97 %
Unclassified	root	N/A	9.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.97 %
Unclassified	root	N/A	9.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.28 %
Unclassified	root	N/A	9.03 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.94 %
Unclassified	root	N/A	9.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.69 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.22 %
Unclassified	root	N/A	9.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.94 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.56 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.22 %
Unclassified	root	N/A	9.03 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.39 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	17.36 %
Unclassified	root	N/A	9.03 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	5.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.39 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	17.36 %
Unclassified	root	N/A	9.03 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.56 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.39 %
Haloarculaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae	0.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	17.36 %
Unclassified	root	N/A	9.03 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	5.56 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.39 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.69 %
Natronomonas	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae → Natronomonas	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	17.36 %
Unclassified	root	N/A	9.03 %
Planctomycetaceae bacterium SCGC AG-212-F19	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	5.56 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.39 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.69 %
unclassified Natronomonas	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae → Natronomonas → unclassified Natronomonas	0.69 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	17.36 %
Unclassified	root	N/A	9.03 %
Planctomycetaceae bacterium SCGC AG-212-F19	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	5.56 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.39 %
Natronomonas sp. ZY43	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae → Natronomonas → unclassified Natronomonas → Natronomonas sp. ZY43	0.69 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.69 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.69 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2007427000\|2007534805	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1882178	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300000956\|JGI10216J12902_101966498	All Organisms → cellular organisms → Bacteria	4900	Open in IMG/M
3300000956\|JGI10216J12902_110532675	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300000956\|JGI10216J12902_111185467	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	1655	Open in IMG/M
3300002907\|JGI25613J43889_10161897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	586	Open in IMG/M
3300003319\|soilL2_10129483	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300003991\|Ga0055461_10029814	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300004009\|Ga0055437_10076812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	946	Open in IMG/M
3300004019\|Ga0055439_10278633	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300004020\|Ga0055440_10069754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300004052\|Ga0055490_10002157	All Organisms → cellular organisms → Bacteria	3375	Open in IMG/M
3300004067\|Ga0055485_10074452	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300004074\|Ga0055518_10038370	Not Available	989	Open in IMG/M
3300004114\|Ga0062593_102735056	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300004156\|Ga0062589_100652516	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300004157\|Ga0062590_102198237	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300004266\|Ga0055457_10117406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300004480\|Ga0062592_100246703	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	1305	Open in IMG/M
3300004643\|Ga0062591_100635665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	951	Open in IMG/M
3300004778\|Ga0062383_10222545	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300004778\|Ga0062383_10466482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	629	Open in IMG/M
3300004779\|Ga0062380_10046928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300005169\|Ga0066810_10151398	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005213\|Ga0068998_10088089	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300005218\|Ga0068996_10213548	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300005295\|Ga0065707_11064185	Not Available	524	Open in IMG/M
3300005829\|Ga0074479_11157247	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300005830\|Ga0074473_10692002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300005836\|Ga0074470_10446504	All Organisms → cellular organisms → Bacteria	18543	Open in IMG/M
3300005836\|Ga0074470_11165286	All Organisms → cellular organisms → Bacteria	5702	Open in IMG/M
3300005836\|Ga0074470_11342299	All Organisms → cellular organisms → Bacteria → Proteobacteria	8070	Open in IMG/M
3300006845\|Ga0075421_100249733	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300006845\|Ga0075421_100336549	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	1827	Open in IMG/M
3300006845\|Ga0075421_102209140	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006845\|Ga0075421_102503655	Not Available	538	Open in IMG/M
3300006847\|Ga0075431_101081684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	767	Open in IMG/M
3300006847\|Ga0075431_101286088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300006865\|Ga0073934_10000751	All Organisms → cellular organisms → Bacteria	87787	Open in IMG/M
3300006880\|Ga0075429_101639738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300006930\|Ga0079303_10331667	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300007004\|Ga0079218_12271869	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009078\|Ga0105106_10212671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1409	Open in IMG/M
3300009091\|Ga0102851_11748799	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300009100\|Ga0075418_13142493	Not Available	503	Open in IMG/M
3300009147\|Ga0114129_10498944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1590	Open in IMG/M
3300009162\|Ga0075423_10507011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1269	Open in IMG/M
3300009167\|Ga0113563_10583799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1235	Open in IMG/M
3300009171\|Ga0105101_10641559	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300009678\|Ga0105252_10000281	All Organisms → cellular organisms → Bacteria	40834	Open in IMG/M
3300010037\|Ga0126304_10123888	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300010391\|Ga0136847_10517040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	935	Open in IMG/M
3300010391\|Ga0136847_13171411	Not Available	1140	Open in IMG/M
3300010399\|Ga0134127_10616032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1116	Open in IMG/M
3300011405\|Ga0137340_1023980	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300011414\|Ga0137442_1092834	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300011417\|Ga0137326_1081612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300011429\|Ga0137455_1085838	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300011430\|Ga0137423_1174880	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300011434\|Ga0137464_1090703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	893	Open in IMG/M
3300011435\|Ga0137426_1030048	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300011438\|Ga0137451_1181638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300012038\|Ga0137431_1005109	All Organisms → cellular organisms → Bacteria	3743	Open in IMG/M
3300012040\|Ga0137461_1000246	All Organisms → cellular organisms → Bacteria	12481	Open in IMG/M
3300012041\|Ga0137430_1057825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300012179\|Ga0137334_1049689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300012912\|Ga0157306_10322483	Not Available	575	Open in IMG/M
3300013308\|Ga0157375_12350935	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	636	Open in IMG/M
3300014260\|Ga0075307_1123047	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300014304\|Ga0075340_1024027	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300014308\|Ga0075354_1106762	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300014870\|Ga0180080_1016116	Not Available	1025	Open in IMG/M
3300014872\|Ga0180087_1048204	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae → Natronomonas → unclassified Natronomonas → Natronomonas sp. ZY43	798	Open in IMG/M
3300014875\|Ga0180083_1017064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300015371\|Ga0132258_12131895	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	1408	Open in IMG/M
3300015374\|Ga0132255_103175726	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	701	Open in IMG/M
3300018000\|Ga0184604_10070934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300018031\|Ga0184634_10202325	Not Available	904	Open in IMG/M
3300018053\|Ga0184626_10041259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1918	Open in IMG/M
3300018063\|Ga0184637_10208991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1196	Open in IMG/M
3300018071\|Ga0184618_10475022	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300018074\|Ga0184640_10387537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	631	Open in IMG/M
3300018074\|Ga0184640_10426587	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300018076\|Ga0184609_10392467	Not Available	646	Open in IMG/M
3300018077\|Ga0184633_10582588	Not Available	530	Open in IMG/M
3300018079\|Ga0184627_10122517	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1376	Open in IMG/M
3300018082\|Ga0184639_10030601	All Organisms → cellular organisms → Bacteria → Proteobacteria	2741	Open in IMG/M
3300018082\|Ga0184639_10340083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300018084\|Ga0184629_10013257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3259	Open in IMG/M
3300018084\|Ga0184629_10384800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	738	Open in IMG/M
3300018422\|Ga0190265_10163313	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300018429\|Ga0190272_10270425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1292	Open in IMG/M
3300018429\|Ga0190272_11866994	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300018432\|Ga0190275_10017061	All Organisms → cellular organisms → Bacteria	5545	Open in IMG/M
3300018432\|Ga0190275_10471276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300018466\|Ga0190268_10030433	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300018466\|Ga0190268_11072811	Not Available	652	Open in IMG/M
3300018469\|Ga0190270_10006126	All Organisms → cellular organisms → Bacteria	6376	Open in IMG/M
3300018476\|Ga0190274_13137550	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	556	Open in IMG/M
3300018476\|Ga0190274_13909214	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300018481\|Ga0190271_10676358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1154	Open in IMG/M
3300019263\|Ga0184647_1511241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	932	Open in IMG/M
3300019884\|Ga0193741_1019336	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300020197\|Ga0194128_10101397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1783	Open in IMG/M
3300021051\|Ga0206224_1000102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6590	Open in IMG/M
3300021081\|Ga0210379_10331613	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300021082\|Ga0210380_10058552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1670	Open in IMG/M
3300021412\|Ga0193736_1022729	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	833	Open in IMG/M
3300022214\|Ga0224505_10024077	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300023102\|Ga0247754_1149286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	580	Open in IMG/M
3300025310\|Ga0209172_10000948	All Organisms → cellular organisms → Bacteria	70304	Open in IMG/M
3300025324\|Ga0209640_10435419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1078	Open in IMG/M
3300025901\|Ga0207688_10026103	All Organisms → cellular organisms → Bacteria → Proteobacteria	3210	Open in IMG/M
3300025951\|Ga0210066_1025403	Not Available	947	Open in IMG/M
3300025971\|Ga0210102_1062781	Not Available	801	Open in IMG/M
3300026320\|Ga0209131_1013218	All Organisms → cellular organisms → Bacteria → Proteobacteria	5084	Open in IMG/M
3300027573\|Ga0208454_1000182	All Organisms → cellular organisms → Bacteria	43846	Open in IMG/M
3300027815\|Ga0209726_10100979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1745	Open in IMG/M
3300027815\|Ga0209726_10172942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300027815\|Ga0209726_10175684	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300027815\|Ga0209726_10435332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300027815\|Ga0209726_10457421	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300027831\|Ga0209797_10040848	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300027909\|Ga0209382_10816704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300028145\|Ga0247663_1027550	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300028578\|Ga0272482_10320872	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10153135	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300031548\|Ga0307408_100146586	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300031548\|Ga0307408_100492444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300031854\|Ga0310904_10859235	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300031908\|Ga0310900_10262338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1250	Open in IMG/M
3300031965\|Ga0326597_10030442	All Organisms → cellular organisms → Bacteria	6875	Open in IMG/M
3300031965\|Ga0326597_10140443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2894	Open in IMG/M
3300031965\|Ga0326597_10221576	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300032002\|Ga0307416_100027317	All Organisms → cellular organisms → Bacteria	4224	Open in IMG/M
3300032163\|Ga0315281_11323014	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300032180\|Ga0307471_100332007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1623	Open in IMG/M
3300033412\|Ga0310810_10650812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300033433\|Ga0326726_10011148	All Organisms → cellular organisms → Bacteria → Proteobacteria	7933	Open in IMG/M
3300033485\|Ga0316626_12202651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300033551\|Ga0247830_10719539	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300034090\|Ga0326723_0229306	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300034165\|Ga0364942_0143908	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300034178\|Ga0364934_0065909	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.00%
Terrestrial	Environmental → Terrestrial	37.50%
Plants	Host-Associated → Plants	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	33.33%
Sediment	Environmental → Aquatic → Sediment	25.00%
Freshwater	Environmental → Aquatic → Freshwater	14.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.42%
Marine	Environmental → Aquatic → Marine	9.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.39%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.39%
Peat	Environmental → Terrestrial → Peat	1.39%
Floodplain	Environmental → Terrestrial → Floodplain	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.47%
Lake	Environmental → Aquatic → Freshwater → Lake	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.39%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.39%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Sediment	Environmental → Aquatic → Marine → Sediment	0.69%
Loam	Environmental → Terrestrial → Soil → Loam	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.17%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.08%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.39%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	11.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	4.17%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.47%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.08%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.39%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.39%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.39%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.69%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.69%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2007427000	Uranium contaminated groundwater from Oak Ridge Integrated Field Research Center, Tennessee	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300021051	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050967

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2007564094	2007427000	Groundwater	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCEMHDVESGSA
ICChiseqgaiiDRAFT_18821781	3300000033	Soil	MEKPPIRKDYFEAECGCRQWYESVPGRPVXXLEEVXEYCXTHDVESGSA*
JGI10216J12902_1019664986	3300000956	Soil	MEKPPIRKEYFEAECGCRQWYESVAGGPVEELEEVVEYCELHDIESGSA*
JGI10216J12902_1105326752	3300000956	Soil	MEKPPIRKDYFESDCGCRKWFEPVAGGALDEFEEVVEYCEIHDVESGSA*
JGI10216J12902_1111854672	3300000956	Soil	MEKPPIRQDFFESECGCRRWFEPVSDGAAEELQEVVEYCEIHDIESGSA*
JGI25613J43889_101618972	3300002907	Grasslands Soil	RRDYFESDCGCKQWYESVPGGPVEELMEFVEYCEIHDVESGSA*
soilL2_101294831	3300003319	Sugarcane Root And Bulk Soil	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCETHEVESGSA*
Ga0055461_100298142	3300003991	Natural And Restored Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDVESGSA*
Ga0055437_100768121	3300004009	Natural And Restored Wetlands	MEKPPIRKDYFESECGCRRWYESVPGGPAEELEEVVEYCETHEIESGSA*
Ga0055439_102786331	3300004019	Natural And Restored Wetlands	IRKDYFESECGCKRWYESVPGGPVEVLEEVVEYCEIHDVESGSV*
Ga0055440_100697541	3300004020	Natural And Restored Wetlands	LPYGVCNPMEKPPIRKDYFESECGCRRWYESVPGGPAEELEEVVEYCETHEIESGSA*
Ga0055490_100021572	3300004052	Natural And Restored Wetlands	METPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCQTHDVESGSA*
Ga0055485_100744521	3300004067	Natural And Restored Wetlands	MEKPPIRKDYFESECGCRRWYEFVAGGPVEELEKVVEYCETHDVESGRA*
Ga0055518_100383701	3300004074	Natural And Restored Wetlands	MNTGKDKAMGKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCETHDIESGSA
Ga0062593_1027350561	3300004114	Soil	MEKPPIRKDYFEAECGCRQWYESVPDGPVEELVEVVEYCEIHDV
Ga0062589_1006525162	3300004156	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCEMHDVESGSA*
Ga0062590_1021982372	3300004157	Soil	MEKPPIRKDYFEAECGCRQWYESVPDGPVEELVEVVEYCEIHDVESGSA*
Ga0055457_101174062	3300004266	Natural And Restored Wetlands	RKDYFERECGCKRWHEFVAGGPVEELEEVVEYCETHDVESGSA*
Ga0062592_1002467032	3300004480	Soil	MEKPPIRKDFFESECGCRRWYESVTDGSAEEFEEIVEYCEIHDIESGSA*
Ga0062591_1006356651	3300004643	Soil	KLSMEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCEMHDVESGSA*
Ga0062383_102225452	3300004778	Wetland Sediment	MEKPPIRKDYFEAECGCRQWYESVPGGPVEVLEEVVEYCETHDVESGSA*
Ga0062383_104664822	3300004778	Wetland Sediment	MEKPPVRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCDTHDIESGSA*
Ga0062380_100469281	3300004779	Wetland Sediment	MEKPPIRKDYFVAECGCRQWYESVPGGPVEVLEEVVEYCEIHDIESGSA*
Ga0066810_101513981	3300005169	Soil	MEKPPIRKDYFKAECGCRQWYESVPGSPVEELVEVVEYCETHDVESGSA*
Ga0068998_100880892	3300005213	Natural And Restored Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDLESGSA*
Ga0068996_102135481	3300005218	Natural And Restored Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGRPAEELEEVVEYCETHDVEGGSA*
Ga0065707_110641852	3300005295	Switchgrass Rhizosphere	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIHDVESGSA*
Ga0074479_111572472	3300005829	Sediment (Intertidal)	MEKPPIRKDYFEAECGCRQWYESVPGGPVDELVEVVEYCEMHDIESGSA*
Ga0074473_106920022	3300005830	Sediment (Intertidal)	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDIESGSA*
Ga0074470_104465043	3300005836	Sediment (Intertidal)	MEKPPIRRDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDVESGSA*
Ga0074470_111652865	3300005836	Sediment (Intertidal)	MERPPIRKDYFESECGCRRWYESVPGGAAEELEEVVEYCETHEIESGSA*
Ga0074470_113422995	3300005836	Sediment (Intertidal)	MEKPPIRKDYFEAECGCRQWYESIPGRPVEELEEVVEYCETHDIESGSA*
Ga0075421_1002497334	3300006845	Populus Rhizosphere	MEKPPIRTDFIEHDCGCRRWYESVVGRPVEELTEVVEYCAIHEIESDSS*
Ga0075421_1003365493	3300006845	Populus Rhizosphere	MEQRPPIRKDFFESECGCRRWYESVSDDSLEELEEVVEYCEIHDIESGSA*
Ga0075421_1022091401	3300006845	Populus Rhizosphere	MEKPPIRKDFFESECGCRRWYESVPDGSVDELEEVVEYCEMHDIESGSA*
Ga0075421_1025036552	3300006845	Populus Rhizosphere	MEKPPIRKDFFESECGCRRWYESVTDGSAEELEEVVEYCDIHDIESGSA*
Ga0075431_1010816842	3300006847	Populus Rhizosphere	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIH
Ga0075431_1012860882	3300006847	Populus Rhizosphere	MEKPPIRKDFFESECGCRRWYESVSDDSLEELEEVVEYCEIHDIESGSA*
Ga0073934_1000075151	3300006865	Hot Spring Sediment	MERPPIRKDFFESECGCRRWYESVPGGPVEELEEVVEYCEMHEIESGSA*
Ga0075429_1016397381	3300006880	Populus Rhizosphere	MEKPPIRKDYFESECGCRRWYESVSDDSTDELEEVVEY
Ga0079303_103316672	3300006930	Deep Subsurface	MEKPPIRKDYFEAECGCRQWYESVPGRPVEELEEVVEYCETHDVESGSA*
Ga0079218_122718692	3300007004	Agricultural Soil	IRTDFIEHDCGCRRWYESIVGRPVEELREVVEYCAIHEIESDSS*
Ga0105106_102126712	3300009078	Freshwater Sediment	MEKPPIRKDYFEAECGCRQWYESVPGGPVDELVEVVEYCETHDVESGSA*
Ga0102851_117487991	3300009091	Freshwater Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYGETHD
Ga0075418_131424931	3300009100	Populus Rhizosphere	MEKPPIRRDFFESECGCRRWYESVSDGSLEELEEVVEYCEIHDIESGSA*
Ga0114129_104989441	3300009147	Populus Rhizosphere	MEKSPIRKDYFESECGCRRWYESVSDGSLEELEEVVEYCEIHDIESGSA*
Ga0075423_105070112	3300009162	Populus Rhizosphere	MEKPPIRKDYFESECGCRRWYEAVSDDSTEELEEVVEYCETHDIESGSA*
Ga0113563_105837991	3300009167	Freshwater Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDVESGS
Ga0105101_106415591	3300009171	Freshwater Sediment	MKKPPIRKDYFEAECGCRQWYESVPGGAVDELVEVVEYCETHDVESGSA*
Ga0105252_1000028113	3300009678	Soil	MRRNSSFMVKPVIRKDHVERECGCRRWHESVLGDPVEELEEVVEYCEMHDIESRSA*
Ga0126304_101238882	3300010037	Serpentine Soil	MEKPPIRKDYFESDCGCRKWFEPVPGGALDEFEEVVEYCEIHDVESGSA*
Ga0136847_105170401	3300010391	Freshwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCEMHEVESGSA*
Ga0136847_131714112	3300010391	Freshwater Sediment	MVKPLIRKDHVERECGCRRWYESVPGGPVEELEEVVEYCEIHDVESGSA*
Ga0134127_106160321	3300010399	Terrestrial Soil	MEKPPIRKDYFESECGCRRWYESVSDDSTEELEEVVEYCETHDIESGSA*
Ga0137340_10239802	3300011405	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCETHDIESGSA*
Ga0137442_10928342	3300011414	Soil	MEKPPVRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCETHDIESGSA*
Ga0137326_10816121	3300011417	Soil	MEKPPIRKDFFESECGCRRWYESVTDGSAEELEEVVEYCDIHDI
Ga0137455_10858382	3300011429	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEIVEYCE
Ga0137423_11748802	3300011430	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCETHD
Ga0137464_10907032	3300011434	Soil	MEKPPIRKDYFEAECGCRQWYESVPDGPVEELVEVVEYCETHDVESGSA*
Ga0137426_10300481	3300011435	Soil	MVKPVIRKDHVERECGCRRWHESVLGDPVEELEEVVEYCEMHDI
Ga0137451_11816382	3300011438	Soil	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIHDIESGSA*
Ga0137431_10051091	3300012038	Soil	MGKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIHDIESSSA*
Ga0137461_100024610	3300012040	Soil	MEKPPIRKDYFESECGCRKWYESVPGGPVEVLEEVVEYCEMHEIESGSA*
Ga0137430_10578252	3300012041	Soil	MEKPPIRKHYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDVESGSA*
Ga0137334_10496892	3300012179	Soil	MEKPPIRKDYFESECGCRRWYESVPGGPVDKLEEVVEYCEIHDVES
Ga0157306_103224832	3300012912	Soil	MEKPPIRKDFFESECGCRRWYESVSDGSVEELEEVVEYCEMHDIESGSA*
Ga0157375_123509351	3300013308	Miscanthus Rhizosphere	MEKPPIRKDYFESECGCRRWYESVSDGSVEELEEVVEYCEMHDIESGSA*
Ga0075307_11230472	3300014260	Natural And Restored Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGAPVEELVEVVEYCETHDVESGSA*
Ga0075340_10240272	3300014304	Natural And Restored Wetlands	METPPIRKGYFEAECGCRQWYESVPGGPVEELVEVVEYCQTHDVESGSA*
Ga0075354_11067622	3300014308	Natural And Restored Wetlands	MEKPPIRKDYFEAECGCRQWYESVPGSPVEELVEVVEYCETHDVESGSA*
Ga0180080_10161161	3300014870	Soil	MEKPPIRKDYFESDCGCRRWYESVPGGPVEVLEEVVEYCEIHDVESGSS*
Ga0180087_10482043	3300014872	Soil	MEKPPIRKDYFESECGCRRWYESVPGGPGEEFEQV
Ga0180083_10170642	3300014875	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGSVEELVEVVEYCETHDVESGSA*
Ga0132258_121318952	3300015371	Arabidopsis Rhizosphere	LEKPPIRKDFFESECGCRRWYESVSDGSAEELEEIVEYCEMHDIESGSA*
Ga0132255_1031757262	3300015374	Arabidopsis Rhizosphere	LEKPPIRKDFFESECGCRRWYESVSDGSAEELEEVVEYCEMHDIESGSA*
Ga0184604_100709342	3300018000	Groundwater Sediment	MEKPPIRKDFFESECGCRRWYESVSDDSAEELEEVVEYCEIHDVESGSA
Ga0184634_102023252	3300018031	Groundwater Sediment	MEKPPIRRDYFESECGCRRWYESVPGGPVEELEEVVEYCEMHEIESGSA
Ga0184626_100412592	3300018053	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCAIHDVESGSA
Ga0184637_102089913	3300018063	Groundwater Sediment	MEKPPIRKDYFESECGCRCWYESVPGGPVEELEEVVEYCEIHDVERGSA
Ga0184618_104750222	3300018071	Groundwater Sediment	MEKSPIRKDFFESECGCRRWYESVSDDSAEELEEVVEYCEIHDVESGSA
Ga0184640_103875371	3300018074	Groundwater Sediment	MEKLPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCEMHDVESGSA
Ga0184640_104265872	3300018074	Groundwater Sediment	MEKPPIRRDYFESECGCRRWYESVPGGPVEELEEVVEYCEMHDVESGSA
Ga0184609_103924672	3300018076	Groundwater Sediment	MEKPPIRKDFFESECGCRRWYELVSDGSAEELEEVVEYCEIHDVESGSA
Ga0184633_105825881	3300018077	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCEIHDVESGSA
Ga0184627_101225171	3300018079	Groundwater Sediment	DYFESECGCRCWYESVPGGPVEELEEVVEYCEIHDVESGSA
Ga0184639_100306012	3300018082	Groundwater Sediment	MEKPPIRRDYFESDCGCKRWYESVAGGPVEKLEEVVEYCEIHDVESGSA
Ga0184639_103400832	3300018082	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEIVEYCDMHDVEGGSA
Ga0184629_100132574	3300018084	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIHDIESGSA
Ga0184629_103848002	3300018084	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVPGGPVDELEEVVEYCEIHDVESGSA
Ga0190265_101633131	3300018422	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDIESGSA
Ga0190272_102704252	3300018429	Soil	MEKPPIRKDYFEAECGCRQWYESVAGGPAEELEEVVEYCEMHDIESGSA
Ga0190272_118669942	3300018429	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEIVEYCETHDIESGSA
Ga0190275_100170613	3300018432	Soil	MEKPPIRKAYFEAECGCRQWYESVAGGPVEELEEVVEYCELHDIESGSA
Ga0190275_104712763	3300018432	Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDTESGSA
Ga0190268_100304332	3300018466	Soil	MEKPPIRKEYFEAECGCRQWYESVAGGPVEELEEVVEYCELHDIESGSA
Ga0190268_110728111	3300018466	Soil	MEKPPIRQDFFESECGCRRWFEPVSDGAAEELQEVVEYCEIHDIESGSA
Ga0190270_100061265	3300018469	Soil	MEKPPIRKDFFESECGCRRWYESVTDGSAEELEEVVEYCDIHDIESGSA
Ga0190274_131375501	3300018476	Soil	PIRKDFFESECGCRRWYESVTDGSAEELEEVVEYCDIHDIESGSA
Ga0190274_139092142	3300018476	Soil	MEKPPIRKDYFESDCGCRKWFEPVPGGALDEFEEVVEYCEIHDVESGSA
Ga0190271_106763582	3300018481	Soil	MERPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCETHDIESGSA
Ga0184647_15112411	3300019263	Groundwater Sediment	MEKPPIRKDYFESECGCRRWYESVSDGSVEELEEVVEYCEMHDIESGSA
Ga0193741_10193361	3300019884	Soil	VEKPPIRKDFFESECGCRRWYESVSDGAVEEFEEVVEYCEIHDIESGSA
Ga0194128_101013974	3300020197	Freshwater Lake	MEKPPIRKDYFESECGCRKWYESVPGGPVEELEEVVEYCETHDNESGSA
Ga0206224_10001028	3300021051	Deep Subsurface Sediment	MEKPPIRKDYFESDCGCRRWYESVPGGPVEALEEVVEYCEIHDVESGSS
Ga0210379_103316132	3300021081	Groundwater Sediment	MEKPPIRKDYFEAECGCRQWYESVPDGPVEELVEVVEYCE
Ga0210380_100585521	3300021082	Groundwater Sediment	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELEEVVEYCETHDIESGSA
Ga0193736_10227292	3300021412	Soil	VEKPPIRKDFFESECGCRRWYESVSDGAVEELEEVVEYCEIHDIESGSA
Ga0224505_100240773	3300022214	Sediment	MEKPPIRKDYFEAECGCRQWYESVPGGPVEVLEEVVEYCETHDVESGSA
Ga0247754_11492861	3300023102	Soil	PMEKPPIRKDYFEAECGCRQWYESVPGSPVEELVEVVEYCETHDVESGSA
Ga0209172_1000094851	3300025310	Hot Spring Sediment	MERPPIRKDFFESECGCRRWYESVPGGPVEELEEVVEYCEMHEIESGSA
Ga0209640_104354191	3300025324	Soil	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCETHDVESGSA
Ga0207688_100261033	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	KDYFEAECGCRQWYESVPGSPVEELVEVVEYCETHDVESGSA
Ga0210066_10254032	3300025951	Natural And Restored Wetlands	MEKPPIRKDYFESECGCRRWYEFVAGGPVEELEKVVEYCETHDVESGRA
Ga0210102_10627812	3300025971	Natural And Restored Wetlands	MEKPPIRKDYFESECGCRRWYEFVAGGPVEELEVVEYCETHDIESGSA
Ga0209131_10132183	3300026320	Grasslands Soil	MEKPPIRRDYFESDCGCRQWYESVPGGPVEELMEFVEYCEIHDVESGSA
Ga0208454_100018235	3300027573	Soil	MRRNSSFMVKPVIRKDHVERECGCRRWHESVLGDPVEELEEVVEYCEMHDIESRSA
Ga0209726_101009792	3300027815	Groundwater	MTLMEKPPIRKDYFESECGCRKWFESVPGGPVEVLEEVVEYCETHEIESGSA
Ga0209726_101729421	3300027815	Groundwater	MDRPPIRKDYFESECGCRKWFESVPGGPVEELEEVVEYCETHDVESGSA
Ga0209726_101756843	3300027815	Groundwater	MEKPPIRKDYFESECGCRKWFESVPGGPVEELEEVVEYCEMHDIESGSA
Ga0209726_104353322	3300027815	Groundwater	MFLTEKPPIRKHYFESECGCRRWYESIPGGPVEELEEVVEYYKIHDVESGSA
Ga0209726_104574211	3300027815	Groundwater	MPPMEKPPIRKDYFESDCGCKRWYESVPGGPVEELEEVVEYCEMHEIESGSA
Ga0209797_100408482	3300027831	Wetland Sediment	MEKPPIRKDYFVAECGCRQWYESVPGGPVEVLEEVVEYCEIHDIESGSA
Ga0209382_108167042	3300027909	Populus Rhizosphere	MEKPPIRTDFIEHDCGCRRWYESVVGRPVEELTEVVEYCAIHEIESDSS
Ga0247663_10275502	3300028145	Soil	MATMEKPPIRRDYFESDCGCKRWYESVPGGPVEELMEYVEYCEIHDVESGSA
Ga0272482_103208721	3300028578	Soil	MEKPPIRKDYFEAECGCRQWYEPVAGGPAEELEEVVE
(restricted) Ga0255310_101531352	3300031197	Sandy Soil	MLSTEKPLIRKDYFESECGCRRWYESTAGRPVEELEEVVEYCEIHNVESGSA
Ga0307408_1001465862	3300031548	Rhizosphere	MTPYRSMEEPPIRTDYIEHDCGCRRWYESVVGGPVEELREVVEYCAIHEIESDSS
Ga0307408_1004924441	3300031548	Rhizosphere	MEKSPIRKDYFESDCGCRKWFEPVPGGALDEFEEVVEYCEIHDVESGSA
Ga0310904_108592352	3300031854	Soil	MEKPPIRRDYFESDCGCRKWFEPVPGGALDEFEEVVEYCEIHDVESGSA
Ga0310900_102623382	3300031908	Soil	MEKPPIRKDYFEAECGCRQWYESVPGSPVEELVEVVEYCETHDVESGSA
Ga0326597_100304421	3300031965	Soil	MEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCET
Ga0326597_101404433	3300031965	Soil	PMEKPPIRKDYFESECGCRRWYESVPGGPVEELEEVVEYCETHDVESGSA
Ga0326597_102215761	3300031965	Soil	MEKPPIRKNYFESECGCRRWYESVPGGPVEELEEVVEYCEIHDVESGS
Ga0307416_1000273172	3300032002	Rhizosphere	MTPYRSMEEPPIRTDYIEHDCGCRRWYESVVGRSVEELREVVEYCAIHEIESDSS
Ga0315281_113230142	3300032163	Sediment	MEKPPIRKDYFESECGCRKWYESVPGGPVEDLEEVVEYCEMHEIESGSA
Ga0307471_1003320071	3300032180	Hardwood Forest Soil	MEKPPIRKDYFESECGCRRWYESVLGGPVDELEEVVEYCEIHD
Ga0310810_106508122	3300033412	Soil	MEKPPIRRDYFESDCGCKQWYESVPGGPVEELMEFVEYCEIHDVESGSA
Ga0326726_100111482	3300033433	Peat Soil	MEKPPIRKDYFEAECGCRQWYESVPGRPVEELVEVVEYCETHDIESGSA
Ga0316626_122026511	3300033485	Soil	MEKPPIRKDYFEAECGCRQWYESVPGRPVEELEEVVEYCETHDVESGSA
Ga0247830_107195392	3300033551	Soil	MEKPPIRTDFIEHDCGCRRWYESVVGRPVDELREVVEYCAIHEIESDSS
Ga0326723_0229306_1_138	3300034090	Peat Soil	MEKPPIRKDYFEAECGCRQWYESVPGGPVEELVEVVEYCETHDIES
Ga0364942_0143908_379_528	3300034165	Sediment	MEKPPIRKDYFEGECGCRRWYESVPGGPVEELEEVVEYCEVHDVESGSA
Ga0364934_0065909_769_918	3300034178	Sediment	MEKPLIRKDYFESECGCKRWYESVPGGPVEELEEIVEYCEIHDVESGSA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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