Metagenome Family F051003

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051003
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	44 residues
Representative Sequence	GELVAALPAGLPLAIEAPCRATADLPALERARRAYRALSALGGA
Number of Associated Samples	130
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.69 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	90.28 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.583 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.278 % of family members)
Environment Ontology (ENVO)	Unclassified (31.944 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.028 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.17% β-sheet: 0.00% Coil/Unstructured: 70.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00296	Bac_luciferase	13.89
PF14833	NAD_binding_11	7.64
PF00378	ECH_1	6.25
PF09995	MPAB_Lcp_cat	6.25
PF01323	DSBA	4.17
PF13561	adh_short_C2	3.47
PF00067	p450	3.47
PF02738	MoCoBD_1	3.47
PF00903	Glyoxalase	2.78
PF00578	AhpC-TSA	2.78
PF10049	DUF2283	2.78
PF01546	Peptidase_M20	2.08
PF01451	LMWPc	2.08
PF13191	AAA_16	1.39
PF00106	adh_short	1.39
PF05721	PhyH	1.39
PF12773	DZR	1.39
PF13458	Peripla_BP_6	0.69
PF01436	NHL	0.69
PF05378	Hydant_A_N	0.69
PF04879	Molybdop_Fe4S4	0.69
PF00156	Pribosyltran	0.69
PF01402	RHH_1	0.69
PF02566	OsmC	0.69
PF00211	Guanylate_cyc	0.69
PF01850	PIN	0.69
PF09972	DUF2207	0.69
PF00528	BPD_transp_1	0.69
PF03446	NAD_binding_2	0.69
PF00285	Citrate_synt	0.69
PF04909	Amidohydro_2	0.69
PF12681	Glyoxalase_2	0.69
PF02574	S-methyl_trans	0.69
PF07690	MFS_1	0.69
PF00884	Sulfatase	0.69
PF02126	PTE	0.69
PF01370	Epimerase	0.69
PF09585	Lin0512_fam	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	13.89
COG2124	Cytochrome P450	Defense mechanisms [V]	3.47
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.39
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.39
COG0372	Citrate synthase	Energy production and conversion [C]	0.69
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.69
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	0.69
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.69
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.69
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.69
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.58 %
Unclassified	root	N/A	10.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	10.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	9.03 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	4.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	9.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.64 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	4.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9.03 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	6.25 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.25 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.25 %
Sphingopyxis macrogoltabida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.25 %
Sphingopyxis macrogoltabida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.42 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.25 %
Sphingopyxis macrogoltabida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.47 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100655634	Not Available	604	Open in IMG/M
3300000881\|JGI10215J12807_1187920	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300000891\|JGI10214J12806_10747147	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300001661\|JGI12053J15887_10508343	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300002121\|C687J26615_10096677	Not Available	740	Open in IMG/M
3300002899\|JGIcombinedJ43975_10090398	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300004020\|Ga0055440_10044976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300004024\|Ga0055436_10160732	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300004156\|Ga0062589_101294197	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005172\|Ga0066683_10593849	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005178\|Ga0066688_10970767	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005295\|Ga0065707_10503429	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	755	Open in IMG/M
3300005343\|Ga0070687_101331916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005353\|Ga0070669_100333866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1227	Open in IMG/M
3300005439\|Ga0070711_100429005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	1079	Open in IMG/M
3300005444\|Ga0070694_100757584	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300005446\|Ga0066686_10377529	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005446\|Ga0066686_10410232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	926	Open in IMG/M
3300005540\|Ga0066697_10009024	All Organisms → cellular organisms → Bacteria	5064	Open in IMG/M
3300005544\|Ga0070686_101300930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300005546\|Ga0070696_101977072	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005577\|Ga0068857_100092151	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300005617\|Ga0068859_100151122	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005843\|Ga0068860_101732366	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005876\|Ga0075300_1039045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300005879\|Ga0075295_1000769	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300005879\|Ga0075295_1025309	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005880\|Ga0075298_1003370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300006047\|Ga0075024_100295768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	792	Open in IMG/M
3300006797\|Ga0066659_11285619	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006846\|Ga0075430_100543873	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300006853\|Ga0075420_101659681	Not Available	547	Open in IMG/M
3300006854\|Ga0075425_100024357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6661	Open in IMG/M
3300006854\|Ga0075425_101916617	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006880\|Ga0075429_101443368	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006881\|Ga0068865_101232790	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300006918\|Ga0079216_10389077	Not Available	870	Open in IMG/M
3300006969\|Ga0075419_11514866	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300007076\|Ga0075435_101311555	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300007265\|Ga0099794_10015617	All Organisms → cellular organisms → Bacteria → Proteobacteria	3356	Open in IMG/M
3300009038\|Ga0099829_10219659	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300009089\|Ga0099828_11812299	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009090\|Ga0099827_10514838	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300009090\|Ga0099827_10635065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	921	Open in IMG/M
3300009156\|Ga0111538_12046018	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009553\|Ga0105249_11062452	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300009815\|Ga0105070_1051746	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010304\|Ga0134088_10244881	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300010304\|Ga0134088_10495779	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010366\|Ga0126379_11046313	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300010376\|Ga0126381_101228194	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300010400\|Ga0134122_10090522	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300011270\|Ga0137391_10397417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1178	Open in IMG/M
3300011441\|Ga0137452_1153354	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300012096\|Ga0137389_11490606	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	572	Open in IMG/M
3300012204\|Ga0137374_10076740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3259	Open in IMG/M
3300012349\|Ga0137387_10108627	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300012354\|Ga0137366_10071792	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300012355\|Ga0137369_10291859	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300012358\|Ga0137368_10265933	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300012363\|Ga0137390_10290074	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300012363\|Ga0137390_11954920	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	513	Open in IMG/M
3300012907\|Ga0157283_10393032	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012917\|Ga0137395_10893142	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012922\|Ga0137394_10117091	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300012922\|Ga0137394_10376497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1211	Open in IMG/M
3300012929\|Ga0137404_11020350	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012944\|Ga0137410_11971328	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300012948\|Ga0126375_11209371	Not Available	629	Open in IMG/M
3300012948\|Ga0126375_11618423	Not Available	558	Open in IMG/M
3300013306\|Ga0163162_10599212	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300014883\|Ga0180086_1131195	Not Available	651	Open in IMG/M
3300015052\|Ga0137411_1327903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2717	Open in IMG/M
3300015241\|Ga0137418_10391606	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300015259\|Ga0180085_1011290	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300015371\|Ga0132258_11118533	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300017792\|Ga0163161_10560808	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300017930\|Ga0187825_10360487	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	552	Open in IMG/M
3300017939\|Ga0187775_10237171	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300017944\|Ga0187786_10496692	Not Available	552	Open in IMG/M
3300017961\|Ga0187778_10710181	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300018053\|Ga0184626_10068259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1496	Open in IMG/M
3300018060\|Ga0187765_10505100	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300018063\|Ga0184637_10728972	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018074\|Ga0184640_10064810	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300018076\|Ga0184609_10100070	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300018076\|Ga0184609_10287104	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300018077\|Ga0184633_10459780	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300018084\|Ga0184629_10270379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	891	Open in IMG/M
3300018422\|Ga0190265_12438613	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300018433\|Ga0066667_10432759	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300018482\|Ga0066669_10211564	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300018482\|Ga0066669_10513211	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300019487\|Ga0187893_10585421	Not Available	710	Open in IMG/M
3300020003\|Ga0193739_1034686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1309	Open in IMG/M
3300020198\|Ga0194120_10004475	All Organisms → cellular organisms → Bacteria → Proteobacteria	21534	Open in IMG/M
3300021090\|Ga0210377_10495731	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021170\|Ga0210400_10478674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	1027	Open in IMG/M
3300021180\|Ga0210396_10831097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	791	Open in IMG/M
3300021420\|Ga0210394_11290951	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300022534\|Ga0224452_1105392	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300022563\|Ga0212128_10801296	Not Available	560	Open in IMG/M
3300025538\|Ga0210132_1041465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300025538\|Ga0210132_1052810	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300025938\|Ga0207704_11182269	Not Available	652	Open in IMG/M
3300026035\|Ga0207703_10508930	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300026089\|Ga0207648_11856261	Not Available	564	Open in IMG/M
3300026285\|Ga0209438_1209648	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300026307\|Ga0209469_1043771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1440	Open in IMG/M
3300026309\|Ga0209055_1188939	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026515\|Ga0257158_1049555	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	773	Open in IMG/M
3300026524\|Ga0209690_1267810	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300026548\|Ga0209161_10215692	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300026551\|Ga0209648_10323374	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300026772\|Ga0207596_103234	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027646\|Ga0209466_1044660	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300027765\|Ga0209073_10111970	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	975	Open in IMG/M
3300027765\|Ga0209073_10115333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	962	Open in IMG/M
3300027775\|Ga0209177_10001380	All Organisms → cellular organisms → Bacteria → Proteobacteria	4269	Open in IMG/M
3300027775\|Ga0209177_10418448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	541	Open in IMG/M
3300027846\|Ga0209180_10146360	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300028608\|Ga0247819_10080218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1599	Open in IMG/M
3300028792\|Ga0307504_10197095	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300030336\|Ga0247826_11320343	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031548\|Ga0307408_102432123	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031681\|Ga0318572_10147337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300031736\|Ga0318501_10579663	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031832\|Ga0318499_10144593	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031858\|Ga0310892_10309463	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300031944\|Ga0310884_10782230	Not Available	582	Open in IMG/M
3300032001\|Ga0306922_10334014	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300032163\|Ga0315281_10909072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	899	Open in IMG/M
3300032180\|Ga0307471_104137299	Not Available	512	Open in IMG/M
3300032205\|Ga0307472_102296573	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	546	Open in IMG/M
3300032261\|Ga0306920_102292426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300032893\|Ga0335069_12764716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	503	Open in IMG/M
3300033412\|Ga0310810_11068323	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300033550\|Ga0247829_10517535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300033551\|Ga0247830_11159544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300034090\|Ga0326723_0564237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis macrogoltabida	525	Open in IMG/M
3300034165\|Ga0364942_0205295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	643	Open in IMG/M
3300034165\|Ga0364942_0243544	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300034692\|Ga0373917_0069051	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.03%
Host-Associated	Host-Associated	15.28%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.44%
Plants	Host-Associated → Plants	15.28%
Aquatic	Environmental → Aquatic	14.58%
Bioremediation	Engineered → Bioremediation	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Sediment	Environmental → Aquatic → Sediment	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.94%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Marine	Environmental → Aquatic → Marine	2.78%
Floodplain	Environmental → Terrestrial → Floodplain	1.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Cave	Environmental → Terrestrial → Cave	0.69%
Metal	Engineered → Bioremediation → Metal	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Loam	Environmental → Terrestrial → Soil → Loam	5.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.78%
Lake	Environmental → Aquatic → Freshwater → Lake	1.39%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.47%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.39%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.47%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.39%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.69%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.69%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026772	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006556342	3300000364	Soil	GVLPLKELVASLPANLPLAIEAPCRATADLPALERAQRAYRALADLTGV*
JGI10215J12807_11879201	3300000881	Soil	LPIDAPLAIEAPVRAMVHLPALERAQRAYQALSALLGA*
JGI10214J12806_107471472	3300000891	Soil	ALPLAVEAPCRATADLPAVERAKRAHQALSALLQSREE*
JGI12053J15887_105083431	3300001661	Forest Soil	GVPLAIEAPCRATANLPALERAKLAYRALTDLTGA*
C687J26615_100966771	3300002121	Soil	LPLAVEAPCGATAALPAVERARRAYRALAALVGA*
JGIcombinedJ43975_100903982	3300002899	Soil	LLPGDGVLPLRELVRALPAGVPLAIEAPVRATGHLPALERAQRAYQALSDLLAG*
Ga0055440_100449762	3300004020	Natural And Restored Wetlands	VLPLAELVAALPEGVPLAIEAPSRVSADLPALERAKRAYRALSTLVTS*
Ga0055436_101607321	3300004024	Natural And Restored Wetlands	LPAGTPLAIEAPCRAHAELPAVERAKRAYQALSTLVSTCGG*
Ga0062589_1012941971	3300004156	Soil	LVAALPADLPLAIEAPCRATAELPALERARRAYQALAALSGV*
Ga0066683_105938491	3300005172	Soil	GVLPLAALVAALPPDVPLAIEAPCRATAHLPALERAQRAYRALTALVAPSA*
Ga0066688_109707672	3300005178	Soil	AALPAGAPLAIEAPCRATADLPAPERAKRAFRALSALAGA*
Ga0065707_105034291	3300005295	Switchgrass Rhizosphere	LPAGIPLAIEAPSRATADLPALERAKRAYRALSALVGAGAA*
Ga0070687_1013319161	3300005343	Switchgrass Rhizosphere	DLVAALPPDLPLAIEAPCRATATLSALERARRAYRALTNLTGA*
Ga0070669_1003338661	3300005353	Switchgrass Rhizosphere	VLPLKELVAALPRSLPLAIEAPCRATAGLPALDRAKRAYRALADLVGA*
Ga0070711_1004290051	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ALPDGIPLAIEAPCRATAELPAVERARRAHQALSKLPGIRAA*
Ga0070694_1007575841	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	EGVLPLAELVAALPDTAPLAVEAPCRAIADLPALERAKRAHRTLSALVQSATERGHGD*
Ga0066686_103775293	3300005446	Soil	GDGVLPLAELVAALPATAPLAVEAPCRAIADLTPVERAKRAHQALSALLQAG*
Ga0066686_104102322	3300005446	Soil	PLRELVAALPPGVPLAVEAPCRATAQLPAEERAKRAYQALSGLLGAT*
Ga0066697_100090246	3300005540	Soil	AELVAALPAGAPLAIEAPCRATADLPAPERAKRAFRALSALTGA*
Ga0070686_1013009301	3300005544	Switchgrass Rhizosphere	ELVAALPRSLPLAIEAPCRATAGLPALDRAKRAYRALADLVGA*
Ga0070696_1019770721	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PLRELVAALPPGLPLAIEAPDRTTAHLPALERAKRAHRALTALLAPA*
Ga0068857_1000921512	3300005577	Corn Rhizosphere	VLPLAELVAALPDTLPLAVEAPCRATADLPAVERATRAYRALSALLQGREE*
Ga0068859_1001511221	3300005617	Switchgrass Rhizosphere	AVEAPCRATADLPAVERAKRAHRAISTLLQCREE*
Ga0068860_1017323661	3300005843	Switchgrass Rhizosphere	GVLPLAELVAALPDGMPLSVEAPCRDTAHLPAAERARRAYRALEALLQTPE*
Ga0075300_10390452	3300005876	Rice Paddy Soil	LRELVAALPPGIPLAIEAPCRATAELPAVERAKRAHRALAALVGEARPAR*
Ga0075295_10007694	3300005879	Rice Paddy Soil	RELVAALPAGIPLAIEAPCRETADLPAVERGKRAYRALAALVGGARPA*
Ga0075295_10253091	3300005879	Rice Paddy Soil	VPLAIEAPCRATADLPASERAKRAYRALSALLAT*
Ga0075298_10033701	3300005880	Rice Paddy Soil	PGEGGLLLAELVAALSDGVPLAIEASCRATADLPASERAKRAYRALSALLAT*
Ga0075024_1002957681	3300006047	Watersheds	LPAGVPLAIEAPCRATAELPAVERARRAYRALSGLVG*
Ga0066659_112856191	3300006797	Soil	GEGVLPLAALITALPDTVPLAVEAPCRATADLPAVERAKRAYRALTALMPSSA*
Ga0075430_1005438732	3300006846	Populus Rhizosphere	GVLPLAELVAALPPDVPLAIEAPCRATVNLSALERARRAHRALSSLLAPR*
Ga0075420_1016596811	3300006853	Populus Rhizosphere	ALPPDLPLAIEAPCRATAGLPALERARRAYRALVDLAGA*
Ga0075425_1000243571	3300006854	Populus Rhizosphere	LPAGAPLAIEAPCRATAELPAPERARRAFRALSALTGA*
Ga0075425_1019166172	3300006854	Populus Rhizosphere	ADLVAALPATAALAVEAPNRATAHLPAVERARRAYQALSALV*
Ga0075429_1014433681	3300006880	Populus Rhizosphere	KELVAALPADLPLAIEAPCRATLDLPALERAKRAYRALADVAGA*
Ga0068865_1012327901	3300006881	Miscanthus Rhizosphere	LVAALPPDLPLAIEAPCRATATLSALERARRAYRALTNLTGA*
Ga0079216_103890771	3300006918	Agricultural Soil	LIEALPAGVPLAIESPCRASADLPALERAKRAYRALSALTGA*
Ga0075419_115148661	3300006969	Populus Rhizosphere	AELVAALPAGIPLAIEAPSRATADLPALERAKRAYRALSALLAR*
Ga0075435_1013115551	3300007076	Populus Rhizosphere	LVAALPDTVPLAIEAPCRATADLPAVERAKRAYRALSTLVPSSV*
Ga0099794_100156175	3300007265	Vadose Zone Soil	PLAELVAALPAGVPLAIEAPCRATAELPAVERARRAYRALSGLVG*
Ga0099829_102196594	3300009038	Vadose Zone Soil	LPLEELVAALPAVPLAIEAPCRATAELPGVERAKRAYRTLSALVSRED*
Ga0099828_118122991	3300009089	Vadose Zone Soil	TAPLAVEAPCRATADLPAVERAKRAYQALSRLAL*
Ga0099827_105148382	3300009090	Vadose Zone Soil	GEGVLPLAELVAALPDTVPLAVEAPCRATADLPAVERATRAYQTLSALLRARTE*
Ga0099827_106350652	3300009090	Vadose Zone Soil	PAGVPLAIEAPCRATADLPALERSKRAYRALTALEGA*
Ga0111538_120460181	3300009156	Populus Rhizosphere	GVLPLAELVAALPADAALAVEAPCRATAELPALERARRAYRALTGLLASTG*
Ga0105249_110624524	3300009553	Switchgrass Rhizosphere	LRDLVAALPPELPLAVEAPSRATADLPAAERARRAYRALGALLETPNH*
Ga0105070_10517462	3300009815	Groundwater Sand	PDDVPLAIEAPCRATAALPALERAKRAYRALTALQSSR*
Ga0134088_102448811	3300010304	Grasslands Soil	GEGVLPLAELVGLLPPTVPLAIEAPCRATAELPAAERAKRAYRALTALLEKS*
Ga0134088_104957791	3300010304	Grasslands Soil	LIAALPAAAPVAIEAPCRATADLPAVERARRAYRALSKLVL*
Ga0126379_110463131	3300010366	Tropical Forest Soil	LPLAIEAPCRATADLPAVERARRAHRALSALLDTSAR*
Ga0126381_1012281941	3300010376	Tropical Forest Soil	AALPDAVPLAVEAPCRATADLPAIERARRAHRSLSALVGAGKA*
Ga0134122_100905223	3300010400	Terrestrial Soil	PPGLPLAIEAPDRTTAHLPAFDRAQRAHRALTALLAPA*
Ga0137391_103974173	3300011270	Vadose Zone Soil	PLRELVAALPAGVPLAIEAPCRSTADLPAVERAKRAYRALSALLTS*
Ga0137452_11533542	3300011441	Soil	LVMALPDSVPLAIEAPCRETAHLPALERATRAYRALSTLTGA*
Ga0137389_114906062	3300012096	Vadose Zone Soil	LVAALPAGVPLAIEAPCRATAELPPAERARRAYAALSALVG*
Ga0137374_100767405	3300012204	Vadose Zone Soil	LSLEELVAALPAVPLAIEAPCRATAELPAVERAKRAYRTLSALVSRED*
Ga0137387_101086273	3300012349	Vadose Zone Soil	LPLEELVAALPAVPLAIEAPCRATAELPAVERAKRAYRTLSALVSRED*
Ga0137366_100717922	3300012354	Vadose Zone Soil	ALPDAVPLAVEAPCRATADLPAVERARRAHQALSALLSAGKA*
Ga0137369_102918593	3300012355	Vadose Zone Soil	LPLEELVAALPAVPLAIEAPCWATAELPAVERAKRAYRTLSALVSRED*
Ga0137368_102659334	3300012358	Vadose Zone Soil	LPLEELVAALPAVPLAIEALCRATAELPAVERAKRAYRTLSALVSRED*
Ga0137390_102900742	3300012363	Vadose Zone Soil	VAALPAVPLAIEAPCRATAELPGVERAKRAYRTLSALVSRED*
Ga0137390_119549202	3300012363	Vadose Zone Soil	AELVAALPAGVPLAIEAPCRATAELPPVERAKRAYAALSALVG*
Ga0157283_103930321	3300012907	Soil	PDALPLAVEAPCRATADLPAVERAKRAHQALSALLQSLGE*
Ga0137395_108931422	3300012917	Vadose Zone Soil	ELVAALPAGLPLAIEAPCRATADLPALERAQRAFRALTDLRGA*
Ga0137394_101170911	3300012922	Vadose Zone Soil	DVPLAIEAPCRATADLPAVERAKRAYRALAGLTGA*
Ga0137394_103764973	3300012922	Vadose Zone Soil	AALPDGIPLAIEAPSRATADLPALERARRAYQALSALLAS*
Ga0137404_110203501	3300012929	Vadose Zone Soil	LAELIAALPAGAPLAIEAPCRATADLPAPERAKRAFRALSALIGA*
Ga0137410_119713282	3300012944	Vadose Zone Soil	AALPATAPLAVEAPCRALADLSPVERAKRAYQALSALLT*
Ga0126375_112093711	3300012948	Tropical Forest Soil	PIAIEAPCRATAELPAAERAKRAYRALTALLEKS*
Ga0126375_116184232	3300012948	Tropical Forest Soil	LPGEGVLPLADLVAMLPADAALAIEAPCRATTDLPAGERARRAYHALSALVGSR*
Ga0163162_105992122	3300013306	Switchgrass Rhizosphere	PLAELVAALPPAAPVAIEAPCRDTAHLPAVERAKRAYQSLTELLARSHR*
Ga0180086_11311952	3300014883	Soil	AELVAALPESAPLAIEAPCRATADLPAIERAKRAYQALSALVERATG*
Ga0137411_13279038	3300015052	Vadose Zone Soil	LPLAELVAALPDDVPLAIEAPCRATADLPALERAKRAYQALARLQSSR*
Ga0137418_103916062	3300015241	Vadose Zone Soil	PGLPLAIEAPCRATAELPALERASRAYRALTALLGAS*
Ga0180085_10112904	3300015259	Soil	AALPDGVPLAIEAPCRATADLPALGRAKRAYRALSALLTS*
Ga0132258_111185333	3300015371	Arabidopsis Rhizosphere	AALPPDLPLAIEAPCRATASLPALERARRAHRALADLTGS*
Ga0163161_105608082	3300017792	Switchgrass Rhizosphere	DLVAALPPDLPLAIEAPCRATATLSALERARRAYRALTNLTGA
Ga0187825_103604872	3300017930	Freshwater Sediment	GVPLAIEAPCRATAELPAVERARRAYQALSALVDGVRPA
Ga0187775_102371712	3300017939	Tropical Peatland	ALPLRELVAALPAGLPLAIEAPCRATADLPAVERARRAHRALSALLQPR
Ga0187786_104966921	3300017944	Tropical Peatland	GALPLRELVAALPAGLPLAIEAPCRATADLPAVERARRAHRALSALLQPR
Ga0187778_107101811	3300017961	Tropical Peatland	PTVPLAIEAPSRATANLPAVERAKRAYRALSALLQAAHPPVG
Ga0184626_100682592	3300018053	Groundwater Sediment	PLKELVAALPLDVPLAIEAPCRATVDLPAVERAKRAHRALAALAGA
Ga0187765_105051002	3300018060	Tropical Peatland	DGLPLAIEAPCRETAHLPALERARRAHAALSALVRRETA
Ga0184637_107289721	3300018063	Groundwater Sediment	LAVEAPCRATANLPAVERATRAYQTLSALLRARTE
Ga0184640_100648103	3300018074	Groundwater Sediment	LPLAELVATLPGNVPLAIEAPCRATAELPAVERAKRAYGALSALVSRED
Ga0184609_101000702	3300018076	Groundwater Sediment	LPLEELVAALPAVPLAIEAPCRATAELPAVERAKRAYRTLSALVSRED
Ga0184609_102871041	3300018076	Groundwater Sediment	PLAELVAALPDDLPLAVEAPCRATADLPAVERARRAYRALAVLRQTQTVTRAEDAC
Ga0184633_104597801	3300018077	Groundwater Sediment	LPAAVPLAVEAPCRATADLPAVERATRAYQALSALLLARTE
Ga0184629_102703792	3300018084	Groundwater Sediment	LPLRELVAALPAGVPLAIEAPCRATADLPAVERAKRAYQALSALLTS
Ga0190265_124386131	3300018422	Soil	LAELVASLPPDVPLAIEAPCRATAELPALERAKRAYRALTALTVSV
Ga0066667_104327592	3300018433	Grasslands Soil	GEGVLPLAALITALPDTVPLAVEAPCRATADLPAVERAKRAYRALTALMPSSA
Ga0066669_102115641	3300018482	Grasslands Soil	PATVPLAIEAPNRATADLPAVERAKRAYRALAALTGA
Ga0066669_105132112	3300018482	Grasslands Soil	LRELVAALPPGLPLAIEAPCRATAERPALERASRAYRALTALLGAS
Ga0187893_105854213	3300019487	Microbial Mat On Rocks	PRELVAALPPGVPLAIEAPCRATADLPALERARRAYQALSALVAS
Ga0193739_10346861	3300020003	Soil	VLPLRELVAALPAGIPLAIEAPCRSTADLPAVERAKRAYRALSALLTS
Ga0194120_100044751	3300020198	Freshwater Lake	RALVAALPADAPLAIEAPCRDTAGLPALERAKRAYRALTALVA
Ga0210377_104957313	3300021090	Groundwater Sediment	VAALPAGVPLAIEAPCRATADLPAVERAKRAYQALSTLLSTCSV
Ga0210400_104786741	3300021170	Soil	AALPDGIPLAIEAPCRATAELPAVERARRAHQALSKLPGIRAA
Ga0210396_108310971	3300021180	Soil	LAELVAALPDGIPLAIEAPCRATAELPAVERARRAHQALSKLPGIRAA
Ga0210394_112909511	3300021420	Soil	VLPLTELVAALPAGVPLAIEAPSRATVELPALERARRAYRAMSALVGAGSV
Ga0224452_11053921	3300022534	Groundwater Sediment	LPLEELVAALPAVPLAIEAPCRATAELPAVERAKRAYRTLSALVSREG
Ga0212128_108012962	3300022563	Thermal Springs	AGAPLAVEAPRRATAHLPAVERATRAYRALAALSPG
Ga0210132_10414651	3300025538	Natural And Restored Wetlands	LPLAELVAALPEGVPLAIEAPSRVSADLPALERAKRAYRALSTLVTS
Ga0210132_10528102	3300025538	Natural And Restored Wetlands	PAGTPLAIEAPCRAHAELPAVERAKRAYQALSTLVSTCGG
Ga0207704_111822692	3300025938	Miscanthus Rhizosphere	LVAALPPDLPLAIEAPCRATATLSALERARRAYRALTNLTGA
Ga0207703_105089301	3300026035	Switchgrass Rhizosphere	LPLAELVAALPDALPLAVEAPCRATADLPAVERAKRAHQALSALLQSREE
Ga0207648_118562611	3300026089	Miscanthus Rhizosphere	PRSLPLAIEAPCRATAGLPALDRAKRAYRALADLVGA
Ga0209438_12096482	3300026285	Grasslands Soil	ALPDGIPLAIEAPSRATADLPALERARRAYQALSALLAS
Ga0209469_10437713	3300026307	Soil	LPATAPLAVEAPCRALADLLPVERAKRAYQALSALLT
Ga0209055_11889392	3300026309	Soil	GELVAALPAGLPLAIEAPCRATADLPALERARRAYRALSALGGA
Ga0257158_10495551	3300026515	Soil	AELVAALPAGVPLAIEAPCRATAELPAVERARRAYAALSTLVG
Ga0209690_12678101	3300026524	Soil	LPLAELVAALPAGAPLAIEAPCRATADLPAPERAKRAFRALSALTGA
Ga0209161_102156921	3300026548	Soil	AELVAALPAGAPLAIEAPCRATADLPAPERAKRAFRALSALTGA
Ga0209648_103233741	3300026551	Grasslands Soil	SAPLAIEAPCRATADLPAVERAKRAYRALSVLVGDCGSS
Ga0207596_1032342	3300026772	Soil	LPSDVPLAIEAPVRAMAHLPALERAQRAYQALSALLGA
Ga0209466_10446601	3300027646	Tropical Forest Soil	LPLAELVAALPAGAPLAIEAPSRATANLPALERATRAYRALTSLAGA
Ga0209073_101119701	3300027765	Agricultural Soil	LRELVAALPAGIPLAIEAPVRATAALPPLERARRAHRALTALLDQGSR
Ga0209073_101153331	3300027765	Agricultural Soil	ELVAALPAGVPLAIEAPCRATAELPAVERATRAYRALSALVGGGAPRPSG
Ga0209177_100013801	3300027775	Agricultural Soil	ALPLRELVAALPAGIPLAIEAPVRATAALPPLERARRAHRALAALLDQGSR
Ga0209177_104184481	3300027775	Agricultural Soil	PLAIEAPCRATAELPALERARHAYQALSKLPGIREA
Ga0209180_101463604	3300027846	Vadose Zone Soil	LPLEELVAALPAVPLAIEAPCRATAELPGVERAKRAYRTLSALVSRED
Ga0247819_100802182	3300028608	Soil	AALPPDLPLAIEAPCRATASLPALERARRAHRALADLTGS
Ga0307504_101970952	3300028792	Soil	VAALPAGVPLAIEAPCRATADLPALERAKRAFLALTALRGA
Ga0247826_113203431	3300030336	Soil	PADLPLAIEAPCRATAELPALERAQRAHQTLATLIGA
Ga0307408_1024321232	3300031548	Rhizosphere	DLVAALPAGVPLAIEAPSRATANLPALERATRAYRSLTALLDAC
Ga0318572_101473373	3300031681	Soil	EGVLPLRDLVAALPPGLPLAIEAPCRATAALPALERAKRAYRALATLTGA
Ga0318501_105796632	3300031736	Soil	AGAPLAIEAPCRATADLPALERAKRAYRALTSLAGA
Ga0318499_101445931	3300031832	Soil	AELIAALPAGAPLAIEAPCRATADLPALERAKRAYRALTSLAGA
Ga0310892_103094632	3300031858	Soil	LKDLVAALPPDLPLAIEAPSRATATLSALERARRAYRALTNLTGA
Ga0310884_107822302	3300031944	Soil	LPLKELVAALPPDLPLAIEAPCRATASLPALERARRAHRALADLTGS
Ga0306922_103340144	3300032001	Soil	PPGLPLAIEAPCRATAALPALERAKRAYRALATLTGA
Ga0315281_109090723	3300032163	Sediment	AALPAGVPLAIEAPCRALADLPAVERAKRAYQALSTLLSPCRG
Ga0307471_1041372991	3300032180	Hardwood Forest Soil	LPLAELVAALPSGVPIAIEAPCRATAELPAAERAKRAYRALTALLEKS
Ga0307472_1022965732	3300032205	Hardwood Forest Soil	AALPPGVPLAIEAPCRATAELPAVERARRAYRALSGLVG
Ga0306920_1022924262	3300032261	Soil	RELVAALPPGLPLAIEAPCRATAALAALERAKRAYRALTTLTGA
Ga0335069_127647161	3300032893	Soil	AALPPGVPLAVEAPSRATAELPAVERAKRAHRAMSALLEGRSA
Ga0310810_110683231	3300033412	Soil	VAALPPGLPLAIEAPDRTTAHLPALERAKRAHRALTALLAPA
Ga0247829_105175351	3300033550	Soil	VLPLAELVAALPAGIPLAIEAPSRATADLPALERAQRAYRALSALIGAGSA
Ga0247830_111595441	3300033551	Soil	VLPLPELVAALPAGVPLAIEAPCRATAHLPALERARRAYQALSTLTGA
Ga0326723_0564237_326_463	3300034090	Peat Soil	VAALPAGVPLAIEAPCRATAELPAVERAKRAYRALSALVGGAGPG
Ga0364942_0205295_3_158	3300034165	Sediment	VLPLRELVAALPAGVPLAIEAPCRALADLPAVERAKRAYQALSTLLSTCRG
Ga0364942_0243544_36_188	3300034165	Sediment	LPLAELVAVLPDTVPLAVEAPCRATAHLTAVERATRAYRTLSALLLARTE
Ga0373917_0069051_449_565	3300034692	Sediment Slurry	LPPDLPLAIEAPCRATAELPALERATRAHRTLSTLIGA
Ga0373959_0083622_2_136	3300034820	Rhizosphere Soil	VAALPAGIPLAIEAPVRATAALPPLERARRAHRALTALLDQGSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences