Metagenome Family F051018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051018
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	84 residues
Representative Sequence	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG
Number of Associated Samples	114
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.94 %
% of genes near scaffold ends (potentially truncated)	27.08 %
% of genes from short scaffolds (< 2000 bps)	81.94 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.944 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.444 % of family members)
Environment Ontology (ENVO)	Unclassified (28.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.87% β-sheet: 0.00% Coil/Unstructured: 45.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.17: Cell cycle transcription factor e2f-dp	d1cf7b_	1cf7	0.58772
a.123.1.1: Nuclear receptor ligand-binding domain	d3v3ea_	3v3e	0.56593
a.123.1.1: Nuclear receptor ligand-binding domain	d1g2na_	1g2n	0.56029
d.2.1.6: Bacterial muramidase, catalytic domain	d1qusa_	1qus	0.55043
a.104.1.0: automated matches	d3nc3a_	3nc3	0.55015

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF13193	AMP-binding_C	49.31
PF06475	Glycolipid_bind	18.75
PF08240	ADH_N	9.03
PF02812	ELFV_dehydrog_N	2.08
PF08241	Methyltransf_11	0.69
PF07690	MFS_1	0.69
PF01055	Glyco_hydro_31	0.69
PF02775	TPP_enzyme_C	0.69
PF00208	ELFV_dehydrog	0.69
PF12681	Glyoxalase_2	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3554	Uncharacterized conserved protein	Function unknown [S]	18.75
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	2.78
COG1501	Alpha-glucosidase/xylosidase, GH31 family	Carbohydrate transport and metabolism [G]	0.69
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.33 %
Unclassified	root	N/A	16.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.94 %
Unclassified	root	N/A	16.67 %
Viruses	superkingdom	All Organisms → Viruses	1.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.94 %
Unclassified	root	N/A	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.64 %
Unclassified	root	N/A	16.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.64 %
Unclassified	root	N/A	16.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.39 %
Unclassified	root	N/A	16.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	22.92 %
Unclassified	root	N/A	16.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.47 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	22.92 %
Unclassified	root	N/A	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	22.92 %
Unclassified	root	N/A	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	22.92 %
Unclassified	root	N/A	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Streptomyces sp. MZ04	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	22.92 %
Unclassified	root	N/A	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_114698517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1606	Open in IMG/M
3300004633\|Ga0066395_10708362	Not Available	598	Open in IMG/M
3300005162\|Ga0066814_10033764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	779	Open in IMG/M
3300005167\|Ga0066672_10602569	Not Available	712	Open in IMG/M
3300005179\|Ga0066684_10082107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1935	Open in IMG/M
3300005179\|Ga0066684_10961761	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005181\|Ga0066678_10643594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	706	Open in IMG/M
3300005184\|Ga0066671_10891749	Not Available	564	Open in IMG/M
3300005187\|Ga0066675_11326727	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005332\|Ga0066388_100000032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39784	Open in IMG/M
3300005332\|Ga0066388_100385468	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300005332\|Ga0066388_105616881	Not Available	635	Open in IMG/M
3300005445\|Ga0070708_100446738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1220	Open in IMG/M
3300005454\|Ga0066687_10221705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1043	Open in IMG/M
3300005467\|Ga0070706_100199243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1870	Open in IMG/M
3300005467\|Ga0070706_101326514	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005468\|Ga0070707_100784148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	917	Open in IMG/M
3300005471\|Ga0070698_100862371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	851	Open in IMG/M
3300005518\|Ga0070699_101918297	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005536\|Ga0070697_100209343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1660	Open in IMG/M
3300005549\|Ga0070704_101669796	Not Available	588	Open in IMG/M
3300005554\|Ga0066661_10253984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1088	Open in IMG/M
3300005555\|Ga0066692_10158368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1394	Open in IMG/M
3300005559\|Ga0066700_10778499	Not Available	647	Open in IMG/M
3300005560\|Ga0066670_10266033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1040	Open in IMG/M
3300005561\|Ga0066699_11177362	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005566\|Ga0066693_10265614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	681	Open in IMG/M
3300005586\|Ga0066691_10412385	Not Available	804	Open in IMG/M
3300005598\|Ga0066706_10446296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1031	Open in IMG/M
3300005713\|Ga0066905_100501254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300005713\|Ga0066905_101754860	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005764\|Ga0066903_100100561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3904	Open in IMG/M
3300005764\|Ga0066903_103304645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	871	Open in IMG/M
3300005937\|Ga0081455_10076328	All Organisms → cellular organisms → Bacteria	2761	Open in IMG/M
3300005937\|Ga0081455_10361802	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300006048\|Ga0075363_100276448	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006048\|Ga0075363_100721859	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006051\|Ga0075364_10235668	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300006796\|Ga0066665_10268878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1357	Open in IMG/M
3300006800\|Ga0066660_11611757	Not Available	514	Open in IMG/M
3300006844\|Ga0075428_100450578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1378	Open in IMG/M
3300006844\|Ga0075428_100809699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	995	Open in IMG/M
3300006845\|Ga0075421_100037408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6151	Open in IMG/M
3300006845\|Ga0075421_100555084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1356	Open in IMG/M
3300006846\|Ga0075430_101247804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300006847\|Ga0075431_100172431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2222	Open in IMG/M
3300006847\|Ga0075431_101932566	Not Available	545	Open in IMG/M
3300006880\|Ga0075429_100528466	Not Available	1034	Open in IMG/M
3300009012\|Ga0066710_100067509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4564	Open in IMG/M
3300009012\|Ga0066710_101050532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1258	Open in IMG/M
3300009090\|Ga0099827_11265534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300009094\|Ga0111539_12023307	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009100\|Ga0075418_10114714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2861	Open in IMG/M
3300009100\|Ga0075418_10329725	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300009137\|Ga0066709_100418090	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300009147\|Ga0114129_10818956	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300009147\|Ga0114129_11225590	Not Available	933	Open in IMG/M
3300009147\|Ga0114129_12494394	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300009162\|Ga0075423_10073941	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300009789\|Ga0126307_10125724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2045	Open in IMG/M
3300009789\|Ga0126307_11364003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	574	Open in IMG/M
3300009840\|Ga0126313_10019666	All Organisms → cellular organisms → Bacteria	4472	Open in IMG/M
3300010036\|Ga0126305_10240431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1161	Open in IMG/M
3300010037\|Ga0126304_10058086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2366	Open in IMG/M
3300010038\|Ga0126315_10006211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5392	Open in IMG/M
3300010041\|Ga0126312_10024288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4044	Open in IMG/M
3300010041\|Ga0126312_11126647	Not Available	577	Open in IMG/M
3300010047\|Ga0126382_11201425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300010166\|Ga0126306_10986895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	686	Open in IMG/M
3300010166\|Ga0126306_11486395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	562	Open in IMG/M
3300010325\|Ga0134064_10177892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300010326\|Ga0134065_10416885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300010359\|Ga0126376_10607299	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
3300010362\|Ga0126377_10088324	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300010398\|Ga0126383_10374246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1453	Open in IMG/M
3300012198\|Ga0137364_10014413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4656	Open in IMG/M
3300012198\|Ga0137364_10580028	Not Available	845	Open in IMG/M
3300012201\|Ga0137365_10113046	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300012201\|Ga0137365_10348413	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012204\|Ga0137374_10024852	All Organisms → cellular organisms → Bacteria	6692	Open in IMG/M
3300012204\|Ga0137374_10029765	All Organisms → cellular organisms → Bacteria	5994	Open in IMG/M
3300012206\|Ga0137380_11164600	Not Available	655	Open in IMG/M
3300012285\|Ga0137370_10144251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1373	Open in IMG/M
3300012350\|Ga0137372_10000563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34852	Open in IMG/M
3300012350\|Ga0137372_10497336	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012353\|Ga0137367_10354875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300012354\|Ga0137366_10299650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1183	Open in IMG/M
3300012355\|Ga0137369_10581685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300012356\|Ga0137371_10735686	Not Available	753	Open in IMG/M
3300012356\|Ga0137371_11084636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300012356\|Ga0137371_11353685	Not Available	524	Open in IMG/M
3300012357\|Ga0137384_10507619	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012357\|Ga0137384_10900848	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012358\|Ga0137368_10161074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1644	Open in IMG/M
3300012359\|Ga0137385_10531887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300012360\|Ga0137375_10796576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	761	Open in IMG/M
3300012362\|Ga0137361_10217744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1731	Open in IMG/M
3300012532\|Ga0137373_10106430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2440	Open in IMG/M
3300012683\|Ga0137398_10187399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1359	Open in IMG/M
3300012924\|Ga0137413_10310298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1105	Open in IMG/M
3300012927\|Ga0137416_11016821	Not Available	741	Open in IMG/M
3300012958\|Ga0164299_10492553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300012989\|Ga0164305_10530916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300018076\|Ga0184609_10175990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	992	Open in IMG/M
3300018431\|Ga0066655_10224365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300018431\|Ga0066655_10311777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1026	Open in IMG/M
3300018432\|Ga0190275_11947699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300018433\|Ga0066667_10011371	All Organisms → cellular organisms → Bacteria	4308	Open in IMG/M
3300018468\|Ga0066662_10218996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1524	Open in IMG/M
3300018469\|Ga0190270_11064844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300018482\|Ga0066669_10091764	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300020003\|Ga0193739_1079098	Not Available	836	Open in IMG/M
3300025910\|Ga0207684_10373054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1227	Open in IMG/M
3300025928\|Ga0207700_10592536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300026277\|Ga0209350_1109246	Not Available	645	Open in IMG/M
3300026295\|Ga0209234_1012698	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M
3300026300\|Ga0209027_1034409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1915	Open in IMG/M
3300026552\|Ga0209577_10839536	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300027560\|Ga0207981_1027648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1028	Open in IMG/M
3300027873\|Ga0209814_10005826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4710	Open in IMG/M
3300027873\|Ga0209814_10280565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	724	Open in IMG/M
3300027874\|Ga0209465_10476782	Not Available	623	Open in IMG/M
3300027882\|Ga0209590_10194473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300027909\|Ga0209382_10171954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2498	Open in IMG/M
3300027909\|Ga0209382_10420650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1485	Open in IMG/M
3300027909\|Ga0209382_11683424	Not Available	623	Open in IMG/M
3300028047\|Ga0209526_10262899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1177	Open in IMG/M
3300028592\|Ga0247822_10724944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	805	Open in IMG/M
3300028771\|Ga0307320_10230008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300028784\|Ga0307282_10165798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1050	Open in IMG/M
3300028787\|Ga0307323_10044011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1568	Open in IMG/M
3300028791\|Ga0307290_10275313	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300028807\|Ga0307305_10089600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1422	Open in IMG/M
3300028814\|Ga0307302_10121421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1256	Open in IMG/M
3300028819\|Ga0307296_10079745	Not Available	1745	Open in IMG/M
3300028828\|Ga0307312_10716338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	663	Open in IMG/M
3300028875\|Ga0307289_10062300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1500	Open in IMG/M
3300028881\|Ga0307277_10251573	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1176545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300032261\|Ga0306920_102248970	Not Available	757	Open in IMG/M
3300033550\|Ga0247829_11835338	Not Available	500	Open in IMG/M
3300033551\|Ga0247830_10220078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	1426	Open in IMG/M
3300033551\|Ga0247830_10404939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300034384\|Ga0372946_0437572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MZ04	635	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.64%
Host-Associated	Host-Associated	17.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.94%
Plants	Host-Associated → Plants	17.36%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.89%
Roots	Host-Associated → Plants → Roots	2.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.39%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.36%
Loam	Environmental → Terrestrial → Soil → Loam	13.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.78%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.64%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1146985174	3300000956	Soil	VTDGPSVSRVAGQLRYLFEERPELSGASPAELARWLSREDRMARARARDPLGRREAVETAAARLDDRITESMVAEALAQLRGRSR*
Ga0066395_107083621	3300004633	Tropical Forest Soil	MTVSDAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARSADPLGSRERVVAAADQLDDRVTESMVSDALAQLRRRDS*
Ga0066814_100337642	3300005162	Soil	VSRVVGQLRYLFEERPELSSAAAAELARWLSREDRMARARAQDPLGTREAVEAVANGLDDRVTEAMVAEA
Ga0066672_106025692	3300005167	Soil	PRPRGRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAQLRGAGGG*
Ga0066684_100821071	3300005179	Soil	PVLGGPRPRGRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVVDALAQLRGSGG*
Ga0066684_109617612	3300005179	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLEDRISESMAAEALEHLRGAGG*
Ga0066678_106435942	3300005181	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG*
Ga0066671_108917492	3300005184	Soil	PVLGGPRPRSRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMAAEALAQLRGAGG*
Ga0066675_113267271	3300005187	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMAAEALEHLRGAGG*
Ga0066388_10000003241	3300005332	Tropical Forest Soil	VSDGPTVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSRERVEAAADRLDDRITDSMVADALAQLRRSDR*
Ga0066388_1003854683	3300005332	Tropical Forest Soil	VSDAPSVSRVVGQLRYLFEERPELSGASSSELARWLSREDRMARARAADPLGSRERVEAAADRLDDRITDSMVADALAQLR
Ga0066388_1056168812	3300005332	Tropical Forest Soil	RPLLGRPRSRGELTVSDAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSREAVEAAAAQLGDRITDTMVADALAQLRRQDS*
Ga0070708_1004467382	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSDGPSVSRVVGQLRYLFEERPELSGVSAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG*
Ga0066687_102217051	3300005454	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAQLRGAGGG*
Ga0070706_1001992433	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG*
Ga0070706_1013265141	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSEGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0070707_1007841481	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0070698_1008623712	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0070699_1019182972	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LTVSDGPSVSRVVGQLRYLFDERPELSGVSAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG*
Ga0070697_1002093432	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTVSDGPSVSRVVGQLRYLFEERPELSGVSAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG*
Ga0070704_1016697962	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLGGPRPRSRLTVSDGPSVSRVVGQLRYLFEERPELSGVSAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0066661_102539842	3300005554	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMVTEALAQLRSAGG*
Ga0066692_101583682	3300005555	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESTVAEALAQLRGAGG*
Ga0066700_107784991	3300005559	Soil	SRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG*
Ga0066670_102660332	3300005560	Soil	VSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVADALAQLRGSGG*
Ga0066699_111773622	3300005561	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAIEAAAAQLDDRITEAMATEARAQLRGAGGG*
Ga0066693_102656142	3300005566	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMVTEALAQLRSAGG*
Ga0066691_104123852	3300005586	Soil	SDGPSVSRVVGQLRYLFEERPELSGASAAELARWFSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAHLRGAGGG*
Ga0066706_104462963	3300005598	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVVDALAQLRGSGG*
Ga0066905_1005012543	3300005713	Tropical Forest Soil	PVLGGARPAGRLTVPDEPSVSRVVGQLRYLFEERPELSGASPAELARWLSREDRMARARAADPLGSREAVEAAATGMDDRITDSMVADALARLRR*
Ga0066905_1017548602	3300005713	Tropical Forest Soil	LTVPDEPSVSRVVGQLRYLFEERPELSGASPAELARWLSREDRMARARAADPLGSREAVEAAAAGMDDRITDSMVADALARLRR*
Ga0066903_1001005615	3300005764	Tropical Forest Soil	VSDGPTVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSREAVEAAAARLDDRVTDSMVAEALAQLRRSDR*
Ga0066903_1033046452	3300005764	Tropical Forest Soil	VSDAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSREAVEAAAAQLGDRITDTMVADALAQLRRQDS*
Ga0081455_100763282	3300005937	Tabebuia Heterophylla Rhizosphere	VSDEPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGRREAVEAAATRLDDRITDSMVADALAQLRRRDP*
Ga0081455_103618022	3300005937	Tabebuia Heterophylla Rhizosphere	VTDAPTVSRVVGQLRYLFEERPELSGASPRELAQWLSREDRMARAREKDPLGSRDAVEAAAARLDDRITDAMVTDALAQLRG*
Ga0075363_1002764481	3300006048	Populus Endosphere	VTADQPSVSRVKGQLGYLFEERPEMARASAAELAQWLSREDRMARARAADPLGADDTVRAAAEQLDDRITEAMVDEALQDIRKN*
Ga0075363_1007218592	3300006048	Populus Endosphere	VADDGPSVSRVKGQLGYLFEERPELARASAAELASWLSREDRMARARAADPLGADDAVRAAAEQLDDRVSEATVAEALQDIHQD*
Ga0075364_102356681	3300006051	Populus Endosphere	VSDGPSVSRVKGQLGYLFEERPEMARASAAELAQWLSREDRMARARAADPLGADDSVKAAAEQLDDRITEAMVAEALRDGPPD*
Ga0066665_102688782	3300006796	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAGQLDDRISESMVAEALAQLRGAGG*
Ga0066660_116117572	3300006800	Soil	SRVVGQLRYLFEERPELSGASATELAQWLSREDRMARARAKDPLGTRDAVEAAAAQLDDRISESMATEALAQLRGAGG*
Ga0075428_1004505782	3300006844	Populus Rhizosphere	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEGAADRLDDRISEPMVADALTQLRGSGG*
Ga0075428_1008096991	3300006844	Populus Rhizosphere	VSDAPSVSRVVGQLRYLFEERPELSNAPAAELARWLSREDRMARARSQDPLGTREAVEGAADRLDDRISEPMVADALAQLRGSGG*
Ga0075421_1000374086	3300006845	Populus Rhizosphere	VADAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMVAEALAQLRGGGR*
Ga0075421_1005550842	3300006845	Populus Rhizosphere	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEGAADRLDDRISQPMVADALTQLRGSGG*
Ga0075430_1012478041	3300006846	Populus Rhizosphere	LGGPRPWSRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0075431_1001724312	3300006847	Populus Rhizosphere	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGSREAVEGAADRLDDRISEPMVADALTQLRGSGG*
Ga0075431_1019325661	3300006847	Populus Rhizosphere	WSRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0075429_1005284661	3300006880	Populus Rhizosphere	CHGQAPEVQAPRPVLGGPGPQGRLTVSDAPSVSRVVGQLRYLFEERPELSNAPAAQLARWLSREDRMARARSQDPLGTREAVEGAADRLDDRISEPMVADALAQLRGSGG*
Ga0066710_1000675093	3300009012	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESTVAEALAQLRGAGG
Ga0066710_1010505322	3300009012	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG
Ga0099827_112655342	3300009090	Vadose Zone Soil	VSRVVGQLRYLFEERPELSGASAADLARWLSREDRMARARAEDPLGTREAVEAAGAELDDRISESMVAEALAQLRGAGG*
Ga0111539_120233072	3300009094	Populus Rhizosphere	VADDGPSVSRVKGQLGYLFEERPEMARASAAELAAWLSREDRMARARAADPLGADDAVRAAAEQLDDRVTEAMVTEALRDIR
Ga0075418_101147142	3300009100	Populus Rhizosphere	LTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0075418_103297252	3300009100	Populus Rhizosphere	VSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGSREAVEGAADRLDNRISEPMVADALTQLRGSGG*
Ga0066709_1004180902	3300009137	Grasslands Soil	LTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESTVAEALAQLRGAGG*
Ga0114129_108189562	3300009147	Populus Rhizosphere	VTDAPSVSRVVGQLRYLFEERPELSGASAGELARWLSREDRMARARAKDPLGSRGAVEAAAAQLDDRVTESTVAAALAQLRGHGR*
Ga0114129_112255901	3300009147	Populus Rhizosphere	LGGPRPRGQLTVADAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMVAEALAQLRGGGR*
Ga0114129_124943942	3300009147	Populus Rhizosphere	VSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEGAADRLDDRISEPMVADALTQLRGSGG*
Ga0075423_100739411	3300009162	Populus Rhizosphere	WSRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG*
Ga0126307_101257241	3300009789	Serpentine Soil	IVGQLRYLFEERPELSSASAGELARWLSREDRMARARAQDPLGARDAVEAAADRLDDRISEPMVANALAQLRGAGG*
Ga0126307_113640031	3300009789	Serpentine Soil	VSDEPSVSRVVGQLRYLFEERPELSGASAPELARWLSREDRMARARAKDPLGSQDAVEAAANRLDDRISDSIVTDALAQLRR*
Ga0126313_100196663	3300009840	Serpentine Soil	VSDAPSVSRVIGQLRYLFEERPELSSASAAELARWLSREDRMARARARDPLGTREAVEAAANRLEDRISASTVADALAQLRRPDG*
Ga0126305_102404312	3300010036	Serpentine Soil	VADAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAKDPLGTREAVEAAANRLEDRISASTVADALAQLRRPDG*
Ga0126304_100580863	3300010037	Serpentine Soil	VSDAPSVSRIVGQLRYLFEERPELSSASAGELARWLSREDRMARARAQDPLGARDAVEAAADRLDDRISEPMVANALAQLRGAGG*
Ga0126315_100062116	3300010038	Serpentine Soil	VSDAPSVSRVIGQLRYLFEERPDLSSASATELARWLSREDRMARARAKDPLGTREAVEAAANRLEDRISASTVADALAQLRRPDG*
Ga0126312_100242885	3300010041	Serpentine Soil	VSDAPSVSRVIGQLRYLFEERPELSSASAAELARWLSREDRMARARAKDPLGTREAVEAAANRLEDRISASTVADALAQLRRPDG*
Ga0126312_111266472	3300010041	Serpentine Soil	ARTGRVAIAESADVSDEPSVSRVVGQLRYLLEERPELSGASAPELARWLSREDRMARARAKDPLGSQEAVEAAASKLDDRISDSMVADALARLRRPGG*
Ga0126382_112014252	3300010047	Tropical Forest Soil	RVVGQLRYLFEERPELSGASPAELARWLSREDRMARARAADPLGSREAVEAAAAGMEDRITDSMVADALARLRR*
Ga0126306_109868952	3300010166	Serpentine Soil	VSDEPSVSRVVGQLRYLFEERPELSGASAPELARWLSREDRMARARAKDPLGSQEAVEAAAARLDDRISDSIVTDALAQLRR*
Ga0126306_114863951	3300010166	Serpentine Soil	VSDEPSVSRVVGQLRYLFEERPELSGASAPELARWLSREDRMARARAKDPLGSQDTVEAAANRLDDRISDSMVADALAQLRR*
Ga0134064_101778922	3300010325	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVADALAQLRGSGG*
Ga0134065_104168851	3300010326	Grasslands Soil	QLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVADALAQLRGSGG*
Ga0126376_106072992	3300010359	Tropical Forest Soil	VSDAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSREAVEAAAAQLGDRITDSMVADALAQVRRQ
Ga0126377_100883245	3300010362	Tropical Forest Soil	LTVPDEPSVSRVVGQLRYLFEERPELSGASPAELARWLSREDRMARARAADPLGSREEVEAAAAGMDDRITDSMVADALARLRR*
Ga0126383_103742463	3300010398	Tropical Forest Soil	LTVPDGPTVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAADPLGSRERVEAAANGLDDRITDSMVAQALAQLRRSDR*
Ga0137364_100144132	3300012198	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAALAQWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAQLRGAGGG*
Ga0137364_105800282	3300012198	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELGTWLSREDRMARARAKDPLGTREAVEAAASQLDDRITEAMAAEALAQLRGAGGG*
Ga0137365_101130463	3300012201	Vadose Zone Soil	VTDAPSVSRVAGQLRYLFEERPELSGASPAELARWLSREDRMARARARDPLGRREAVEAAAAQLDDRITESMVAEALAQLRGRGR*
Ga0137365_103484132	3300012201	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAIEAAAAQLDDRITEAMATEALAHLRGAGGG*
Ga0137374_100248523	3300012204	Vadose Zone Soil	MADGPSVSRIVGQLGYLFEERPELTGASAAELARWLSREDRMARARENDPLGTRKAVEAAAAQLDDRVTEAMVAEALTQLRRSGG*
Ga0137374_100297656	3300012204	Vadose Zone Soil	MADGPSVSRVVGQLGYLFEERPELTGAPAIELARWLSREDRMARARENDPLGSREAVEGAAAQLDDRVTEAMVAEALAQLRR*
Ga0137380_111646002	3300012206	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAMDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG*
Ga0137370_101442512	3300012285	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEARPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAQLRGAGGG*
Ga0137372_1000056322	3300012350	Vadose Zone Soil	VSRVAGQLRYLFEERPELSGASPAELARWLSREDRMARARARDPLGRREAVEAAAAQLDDRITESMVAEALAQLRGRGR*
Ga0137372_104973362	3300012350	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGEAMAAEALAQLRGAGG*
Ga0137367_103548752	3300012353	Vadose Zone Soil	VSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLEDRISASTVADALAELRRPGG*
Ga0137366_102996501	3300012354	Vadose Zone Soil	VSDAPSVSRVVGQLRYLFEERPELSSASTAELARWLSREDRMARARAKDPLGTRAAVEAAAAQLDDRVTDGMV
Ga0137369_105816852	3300012355	Vadose Zone Soil	VSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAAARLDDRISEPMVADALAQLRGGSG*
Ga0137371_107356862	3300012356	Vadose Zone Soil	RVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGRREAVEAAAAELDDRITESMVAEALAQLRGRGR*
Ga0137371_110846362	3300012356	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVARALAQL
Ga0137371_113536851	3300012356	Vadose Zone Soil	RGRLTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAHLRGAGGG*
Ga0137384_105076192	3300012357	Vadose Zone Soil	VSRVVGQLRYLFEERPELSGAPAAELAQWHSREDRMARARAEDPLGTREAVEAAGAELDDRISEAMVAEALAQLRGAGGG*
Ga0137384_109008482	3300012357	Vadose Zone Soil	VPDGPSVSRVAGQLRYLFEERPELAGASALELARWLSREDRMARARAKDPLGSREAVEAAAGKLDDRIPASMVDEALAQLRRSDR*
Ga0137368_101610743	3300012358	Vadose Zone Soil	MADGPSVSRIVGQLGYLFEERPELTGASAAELARWLSREDRMARARENDPLGTRDAVEAAAARLDDRVSEAMVAEALTQLRRSGG*
Ga0137385_105318872	3300012359	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELAQWLSREDRMARARAKDPLGTREAIEAAAAQLDDRITEAMATEALAQLRGAGGG*
Ga0137375_107965762	3300012360	Vadose Zone Soil	MSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLEDRISASTVADALAELRRPGG*
Ga0137361_102177443	3300012362	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMAAEALAQLRGTGG*
Ga0137373_101064303	3300012532	Vadose Zone Soil	MADGPSVSRIVGQLGYLFEERPELTGASAAELARWLSREDRMARARENDPLGTRKAVEAAAARLDDRVTEAMVAEALTQLRRCGG*
Ga0137398_101873992	3300012683	Vadose Zone Soil	VPDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEATAAEALAQLRGVGGG*
Ga0137413_103102981	3300012924	Vadose Zone Soil	VPDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMAQARAKDPLGTREAVEAAAAQLDDRITEAMAAEALAQ
Ga0137416_110168211	3300012927	Vadose Zone Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEVAAAQLDDRITEATAAEALAQLRGVGGG*
Ga0164299_104925533	3300012958	Soil	FEERPELSGASAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDDRISEAMVAEALAQLHGAGG*
Ga0164305_105309163	3300012989	Soil	LTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRLARARAKDPLGTREAVEAAAAQLDDRISEAMVAEALAQLHGAGG*
Ga0184609_101759902	3300018076	Groundwater Sediment	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGAREAVEAAANRLDDRISEEMVADALAQLRGTGG
Ga0066655_102243653	3300018431	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVVDALAQLRGSGG
Ga0066655_103117772	3300018431	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISES
Ga0190275_119476992	3300018432	Soil	SRVKGQLGYLFEERPEMARASAAELAQWLSREDRMARAREADPVGADDAVRAAADELDDRITEAMVTEAMQEIRKD
Ga0066667_100113716	3300018433	Grasslands Soil	VSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPPGTREAVEAAAAQLDDRISESMAAEALAQLRGAGG
Ga0066662_102189963	3300018468	Grasslands Soil	PRPVLGGPRTRSRLTVSDGPSLSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMVAEALAQLRGAGG
Ga0190270_110648442	3300018469	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEQMVADALAQLRGAGG
Ga0066669_100917642	3300018482	Grasslands Soil	VSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRVTDGMVVDALAQLRGSGG
Ga0193739_10790981	3300020003	Soil	GRLNVSDAPSVSRVVGQLRYLFEERPELSSASAADLARWLSREDRMARARAQDPLGTREAVEGAADRLDDRISEPMVADALVQLRSSGG
Ga0207684_103730542	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAEDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG
Ga0207700_105925362	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LTVSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAVDPLGTREAVEAAAAQLDERISESMVAEALAQLRGSGG
Ga0209350_11092462	3300026277	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGSREAVEAAAAQLDDRITEAMATEALAQLRGAGGG
Ga0209234_10126982	3300026295	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMATEALAQLRGAGGG
Ga0209027_10344092	3300026300	Grasslands Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELGTWLSREDRMARARAKDPLGTREAVEAAASQLDDRITEAMAAEALAQLRGAGGG
Ga0209577_108395362	3300026552	Soil	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISESMATEALAQLRGAGG
Ga0207981_10276482	3300027560	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAVANGLDDRVTEAMVAEALAQLRGAGG
Ga0209814_100058266	3300027873	Populus Rhizosphere	VSDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRIGESMVAEALAQLRGSGG
Ga0209814_102805652	3300027873	Populus Rhizosphere	VSRVVGQLRYLFEERPELSNAPAAELARWLSREDRMARARSQDPLGTREAVEGAADRLDDRISEPMVADALTQLRGSGG
Ga0209465_104767822	3300027874	Tropical Forest Soil	MTVSDAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARSADPLGSRERVVAAADQLDDRVTESMVSDALAQLRRRDS
Ga0209590_101944733	3300027882	Vadose Zone Soil	VLGGPGPRGRLTVADGPSVSRVVGQLRYLFEERPELSGASAADLARWLSREDRMARARAEDPLGTREAVEAAGAELDDRISESMVAEALAQLRGAGG
Ga0209382_101719542	3300027909	Populus Rhizosphere	VSDAPSVSRVVGQLRYLFEERPELSNAPAAELARWLSREDRMARARSQDPLGTREAVEGAADRLDDRISEPMVADALAQLRGSGG
Ga0209382_104206502	3300027909	Populus Rhizosphere	VADAPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRITEAMVAEALAQLRGGGR
Ga0209382_116834242	3300027909	Populus Rhizosphere	GQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGSREAVEGAADRLDDRISEPMVADALTQLRGSGG
Ga0209526_102628992	3300028047	Forest Soil	VPDGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRMARARAKDPLGTREAVEAAAAQLDDRISEAMVAEALAQLRGADG
Ga0247822_107249442	3300028592	Soil	VSDGPSVSRVKGQLGYLFEERPEMARASAAELAQWLSREDRMARARAADPLGADMSVKAAAEQLDDRITEAMVAEALRDGPPD
Ga0307320_102300082	3300028771	Soil	GPGPRGRLTVSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEAMVADALAQLRGAGG
Ga0307282_101657981	3300028784	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEAMVADALAQLRGAGG
Ga0307323_100440112	3300028787	Soil	VSRVVGQLRYLFEERPELSSASAVELARWLSREDRMARARAEDPLGTREAVEAAANRLDDRISEAMVADALAQLRGTGG
Ga0307290_102753132	3300028791	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEPMVADALAQLRGTGG
Ga0307305_100896003	3300028807	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAEDPLGTREAVEAAANRLDDRISEQMVADALAQLRGAGG
Ga0307302_101214212	3300028814	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAEDPLGTREAVEAAANRLDDRISEAMVADALAQLRGAGG
Ga0307296_100797454	3300028819	Soil	RPVLGGPGPRGRLTVSDAPSVSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEQMVADALAQLRGAGG
Ga0307312_107163382	3300028828	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEPMVADALAQLRGAGG
Ga0307289_100623002	3300028875	Soil	VSRVVGQLRYLFEERPELSSASAAELARWLSREDRMARARAEDPLGTREAVEAAANRLDDRISEPMVADALAQLRGTGG
Ga0307277_102515732	3300028881	Soil	VSRVVGQLRYLFEERPELSSASTAELARWLSREDRMARARAQDPLGTREAVEAAANRLDDRISEPMVADALAQLRGAGG
(restricted) Ga0255312_11765452	3300031248	Sandy Soil	VADGPSVSRVVGQLRYLFEERPELSGASAAELARWLSREDRLARARAEDPLGTREAVEAAGARLDDRISEAMVAEALAQLRGAGG
Ga0306920_1022489702	3300032261	Soil	VSDAPSVSRVVGQLRYLFEERPELSGASPSELARWLSREDRMARARAADPLGSRERVEAAADRLDDRITDSMVADALAQLRRGDG
Ga0247829_118353382	3300033550	Soil	VSDGPSVSRVNGQLGYLFEERPEMARASAAELAQWLSREDRMARARAADPLGADDSVKTAAEQLDDRITEAMVAEALRDGPPD
Ga0247830_102200782	3300033551	Soil	VSRVVGQLRYLFEERPELSSASAAEVARWLGREDRMARARAQDPLGTREAVEAAAGQLDDRITESMVSEALAQLRGGDR
Ga0247830_104049392	3300033551	Soil	VSDGPSVSRVKGQLGYLFEERPEMAQASAAELAQWLSREDRMARARAADPLGADMSVKAAAEQLDDRITEAMVAEALRDGPPD
Ga0372946_0437572_383_634	3300034384	Soil	LSDGPTVSRVVGQLRYLFEERPELSGASAAQLAQWLSREDRMARARAKDPLGSREAVEAAAAQLDDRITEAMVAEALAQLRGGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters