Metagenome / Metatranscriptome Family F051260

Basic Information
Family ID	F051260
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	51 residues
Representative Sequence	MDHGQLSMVADKFQWVFSEALLNACGKDVKFCRRQRVITPFRLGLALTA
Number of Associated Samples	111
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.62 %
% of genes near scaffold ends (potentially truncated)	86.11 %
% of genes from short scaffolds (< 2000 bps)	89.58 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (59.028 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.750 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.17% β-sheet: 0.00% Coil/Unstructured: 68.83%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF01609	DDE_Tnp_1	4.17
PF02371	Transposase_20	2.78
PF14690	zf-ISL3	1.39
PF07592	DDE_Tnp_ISAZ013	1.39
PF13546	DDE_5	1.39
PF13358	DDE_3	1.39
PF00072	Response_reg	0.69
PF13561	adh_short_C2	0.69
PF00488	MutS_V	0.69
PF00078	RVT_1	0.69
PF14104	DUF4277	0.69
PF05443	ROS_MUCR	0.69
PF03050	DDE_Tnp_IS66	0.69
PF00535	Glycos_transf_2	0.69
PF13565	HTH_32	0.69
PF13701	DDE_Tnp_1_4	0.69
PF08388	GIIM	0.69
PF00211	Guanylate_cyc	0.69
PF00378	ECH_1	0.69
PF02182	SAD_SRA	0.69
PF01850	PIN	0.69
PF14106	DUF4279	0.69
PF03916	NrfD	0.69
PF00248	Aldo_ket_red	0.69
PF13416	SBP_bac_8	0.69
PF00691	OmpA	0.69
PF01526	DDE_Tnp_Tn3	0.69
PF00265	TK	0.69
PF09339	HTH_IclR	0.69
PF08241	Methyltransf_11	0.69
PF01370	Epimerase	0.69
PF01844	HNH	0.69
PF00119	ATP-synt_A	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	4.17
COG3293	Transposase	Mobilome: prophages, transposons [X]	4.17
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	4.17
COG5421	Transposase	Mobilome: prophages, transposons [X]	4.17
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	4.17
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	4.17
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.78
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.69
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.69
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	0.69
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	0.69
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.69
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.69
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.69
COG4957	Predicted transcriptional regulator	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.72 %
Unclassified	root	N/A	40.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.72 %
Unclassified	root	N/A	40.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.03 %
Unclassified	root	N/A	40.28 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.86 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	3.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.69 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.17 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	3.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.39 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.86 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3.47 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.08 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.39 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.69 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.69 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.69 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.69 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.08 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.39 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.69 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.69 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.69 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.69 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.69 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.69 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.69 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.69 %
Coxiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae	0.69 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.69 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.69 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.69 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.69 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.69 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.39 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
SAR202 cluster bacterium Io17-Chloro-G4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G4	0.69 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.69 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.69 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.69 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.69 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.69 %
Thiothrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix	0.69 %
Coxiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Coxiella	0.69 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.69 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.69 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.69 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.39 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.69 %
Acinetobacter calcoaceticus/baumannii complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex	0.69 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.69 %
Fimbriiglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus	0.69 %
Desulforhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus	0.69 %
Thiothrix nivea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix nivea	0.69 %
Coxiella burnetii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Coxiella → Coxiella burnetii	0.69 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
SAR202 cluster bacterium Io17-Chloro-G4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G4	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.69 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.69 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.69 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.39 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.69 %
unclassified Desulforhabdus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus	0.69 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	0.69 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.69 %
Acinetobacter baumannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	0.69 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.69 %
Thiothrix nivea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix nivea	0.69 %
Coxiella burnetii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Coxiella → Coxiella burnetii	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
SAR202 cluster bacterium Io17-Chloro-G4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G4	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.69 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.69 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.69 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.28 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.39 %
Desulforhabdus sp. TSK	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus → Desulforhabdus sp. TSK	0.69 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.69 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.69 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	0.69 %
Acinetobacter baumannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	0.69 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.69 %
Thiothrix nivea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix nivea	0.69 %
Coxiella burnetii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Coxiella → Coxiella burnetii	0.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.69 %
SAR202 cluster bacterium Io17-Chloro-G4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G4	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.69 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.69 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.69 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.69 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.69 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11602206	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300000955\|JGI1027J12803_103580125	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300004463\|Ga0063356_101959546	Not Available	885	Open in IMG/M
3300004633\|Ga0066395_10474310	Not Available	717	Open in IMG/M
3300005289\|Ga0065704_10005512	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300005332\|Ga0066388_101238783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1280	Open in IMG/M
3300005332\|Ga0066388_105050522	Not Available	670	Open in IMG/M
3300005447\|Ga0066689_10882115	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005450\|Ga0066682_10961686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	505	Open in IMG/M
3300005518\|Ga0070699_100564084	Not Available	1037	Open in IMG/M
3300005536\|Ga0070697_102109612	Not Available	505	Open in IMG/M
3300005546\|Ga0070696_101946029	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005552\|Ga0066701_10068459	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300005554\|Ga0066661_10654915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	619	Open in IMG/M
3300005557\|Ga0066704_10926367	Not Available	538	Open in IMG/M
3300005558\|Ga0066698_10747111	Not Available	639	Open in IMG/M
3300005558\|Ga0066698_10823494	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005561\|Ga0066699_10510632	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005561\|Ga0066699_10511500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	859	Open in IMG/M
3300005713\|Ga0066905_100159178	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1638	Open in IMG/M
3300005764\|Ga0066903_103053529	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005764\|Ga0066903_105579221	Not Available	663	Open in IMG/M
3300006194\|Ga0075427_10021703	Not Available	1022	Open in IMG/M
3300006794\|Ga0066658_10810620	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006797\|Ga0066659_10167331	Not Available	1579	Open in IMG/M
3300006797\|Ga0066659_10420214	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300006797\|Ga0066659_10903114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Coxiellaceae → Coxiella → Coxiella burnetii	738	Open in IMG/M
3300006797\|Ga0066659_11022005	Not Available	691	Open in IMG/M
3300006797\|Ga0066659_11918689	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006800\|Ga0066660_10527251	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006844\|Ga0075428_100308282	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300006844\|Ga0075428_100721550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1061	Open in IMG/M
3300006844\|Ga0075428_102187389	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006845\|Ga0075421_100079622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4133	Open in IMG/M
3300006845\|Ga0075421_101120832	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300006847\|Ga0075431_102144252	Not Available	513	Open in IMG/M
3300006853\|Ga0075420_100672679	Not Available	893	Open in IMG/M
3300006854\|Ga0075425_103106580	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006880\|Ga0075429_101956547	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006904\|Ga0075424_100506741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300006969\|Ga0075419_11316911	Not Available	537	Open in IMG/M
3300009088\|Ga0099830_11726260	Not Available	522	Open in IMG/M
3300009090\|Ga0099827_10906310	Not Available	764	Open in IMG/M
3300009090\|Ga0099827_11206337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	658	Open in IMG/M
3300009090\|Ga0099827_11230255	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009090\|Ga0099827_11673644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	554	Open in IMG/M
3300009090\|Ga0099827_11886141	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009137\|Ga0066709_101484913	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300009137\|Ga0066709_103710383	Not Available	554	Open in IMG/M
3300009137\|Ga0066709_104280237	Not Available	520	Open in IMG/M
3300009147\|Ga0114129_11388563	Not Available	867	Open in IMG/M
3300009444\|Ga0114945_10654057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	639	Open in IMG/M
3300009795\|Ga0105059_1063410	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	518	Open in IMG/M
3300009818\|Ga0105072_1015936	Not Available	1350	Open in IMG/M
3300009822\|Ga0105066_1060198	Not Available	806	Open in IMG/M
3300010046\|Ga0126384_10795831	Not Available	846	Open in IMG/M
3300010047\|Ga0126382_10368071	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010047\|Ga0126382_10457189	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300010047\|Ga0126382_10844236	Not Available	786	Open in IMG/M
3300010047\|Ga0126382_10851822	Not Available	783	Open in IMG/M
3300010047\|Ga0126382_11720667	Not Available	586	Open in IMG/M
3300010304\|Ga0134088_10290786	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	789	Open in IMG/M
3300010333\|Ga0134080_10590079	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	539	Open in IMG/M
3300010336\|Ga0134071_10655168	Not Available	553	Open in IMG/M
3300010358\|Ga0126370_10971110	Not Available	773	Open in IMG/M
3300010359\|Ga0126376_11410576	Not Available	722	Open in IMG/M
3300010361\|Ga0126378_11970906	Not Available	665	Open in IMG/M
3300010361\|Ga0126378_12124293	Not Available	640	Open in IMG/M
3300010375\|Ga0105239_13308296	Not Available	525	Open in IMG/M
3300010398\|Ga0126383_10232010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1797	Open in IMG/M
3300010398\|Ga0126383_10528118	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300010398\|Ga0126383_13079611	Not Available	544	Open in IMG/M
3300012096\|Ga0137389_11331546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus → Desulforhabdus sp. TSK	612	Open in IMG/M
3300012189\|Ga0137388_10250848	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300012198\|Ga0137364_11258182	Not Available	552	Open in IMG/M
3300012203\|Ga0137399_10482597	Not Available	1039	Open in IMG/M
3300012204\|Ga0137374_10377911	Not Available	1134	Open in IMG/M
3300012205\|Ga0137362_10699969	Not Available	871	Open in IMG/M
3300012207\|Ga0137381_10922148	Not Available	755	Open in IMG/M
3300012207\|Ga0137381_11039153	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300012208\|Ga0137376_11327322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	610	Open in IMG/M
3300012211\|Ga0137377_10177678	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300012349\|Ga0137387_10097947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2040	Open in IMG/M
3300012349\|Ga0137387_10397076	Not Available	1000	Open in IMG/M
3300012349\|Ga0137387_10583653	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012354\|Ga0137366_10502403	Not Available	876	Open in IMG/M
3300012357\|Ga0137384_11466864	Not Available	531	Open in IMG/M
3300012363\|Ga0137390_11290563	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012923\|Ga0137359_10430931	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300012944\|Ga0137410_10510297	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012944\|Ga0137410_10648997	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012955\|Ga0164298_11197640	Not Available	575	Open in IMG/M
3300013296\|Ga0157374_12243581	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300013306\|Ga0163162_12538973	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300015371\|Ga0132258_10020603	All Organisms → cellular organisms → Bacteria	14371	Open in IMG/M
3300015371\|Ga0132258_13869738	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300015373\|Ga0132257_100450314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium Io17-Chloro-G4	1572	Open in IMG/M
3300015374\|Ga0132255_100073648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4549	Open in IMG/M
3300015374\|Ga0132255_102234479	Not Available	834	Open in IMG/M
3300016404\|Ga0182037_10080291	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2288	Open in IMG/M
3300016422\|Ga0182039_10718617	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300017656\|Ga0134112_10267369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300017657\|Ga0134074_1412272	Not Available	502	Open in IMG/M
3300017792\|Ga0163161_10304395	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300017997\|Ga0184610_1199500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	668	Open in IMG/M
3300018079\|Ga0184627_10004545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6077	Open in IMG/M
3300018433\|Ga0066667_11711865	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300021307\|Ga0179585_1181958	Not Available	527	Open in IMG/M
3300025149\|Ga0209827_10580749	Not Available	574	Open in IMG/M
3300025149\|Ga0209827_11170397	Not Available	561	Open in IMG/M
3300025910\|Ga0207684_10946679	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300025940\|Ga0207691_10157516	Not Available	1994	Open in IMG/M
3300026118\|Ga0207675_100070781	All Organisms → cellular organisms → Bacteria	3260	Open in IMG/M
3300026307\|Ga0209469_1097618	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026314\|Ga0209268_1114389	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	693	Open in IMG/M
3300026318\|Ga0209471_1234447	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300026325\|Ga0209152_10158820	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300026325\|Ga0209152_10501672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	501	Open in IMG/M
3300026335\|Ga0209804_1103154	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300026524\|Ga0209690_1082409	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1351	Open in IMG/M
3300026538\|Ga0209056_10162269	Not Available	1691	Open in IMG/M
3300026555\|Ga0179593_1130573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4303	Open in IMG/M
3300027577\|Ga0209874_1025110	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
3300027809\|Ga0209574_10120618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix nivea	769	Open in IMG/M
3300027874\|Ga0209465_10236444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	913	Open in IMG/M
3300027882\|Ga0209590_10083808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1868	Open in IMG/M
3300027882\|Ga0209590_10550528	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300027903\|Ga0209488_10510853	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	880	Open in IMG/M
3300027909\|Ga0209382_11183735	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300028592\|Ga0247822_11405041	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300030336\|Ga0247826_10189694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1396	Open in IMG/M
3300030592\|Ga0247612_1015330	Not Available	1128	Open in IMG/M
3300030635\|Ga0247627_10029938	Not Available	995	Open in IMG/M
3300031114\|Ga0308187_10230954	Not Available	663	Open in IMG/M
3300031680\|Ga0318574_10073800	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300031740\|Ga0307468_101941782	Not Available	562	Open in IMG/M
3300031912\|Ga0306921_10335557	Not Available	1768	Open in IMG/M
3300031942\|Ga0310916_11560866	Not Available	537	Open in IMG/M
3300032039\|Ga0318559_10030466	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300032066\|Ga0318514_10161234	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300032205\|Ga0307472_101525569	Not Available	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.17%
Host-Associated	Host-Associated	20.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.69%
Plants	Host-Associated → Plants	20.83%
Aquatic	Environmental → Aquatic	3.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.08%
Sediment	Environmental → Aquatic → Sediment	1.39%
Phylloplane	Host-Associated → Plants → Phylloplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	7.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.17%
Sand	Environmental → Terrestrial → Soil → Sand	2.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.47%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030592	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051260

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_116022063	3300000890	Soil	MDHGQLSMVAEKFQWVFSETLLNTCGKDTKFCRRQR
JGI1027J12803_1035801252	3300000955	Soil	MDRGQLSMVADKFQWVFSEPLLNACGQDVKFCRRQRVITP
Ga0063356_1019595461	3300004463	Arabidopsis Thaliana Rhizosphere	MDHGQLSMVVDKFQWVFSESLLNACGKDVKFCRRQRVITPFRLGLALTATCASQRVET
Ga0066395_104743103	3300004633	Tropical Forest Soil	MDHGHLSMMADKFQWVFSEALLNACGTDVKFCRRQRILTPFRLGLALIATCASQRV
Ga0065704_100055124	3300005289	Switchgrass Rhizosphere	MDHGQLSMVADKFQWVFSEPLLNACGKDVKFCRRQRVITPFRLGLST*
Ga0066388_1012387831	3300005332	Tropical Forest Soil	MDHGPLSMVADKCQGVFSEALRNACGKAVKLCRRQRVITP
Ga0066388_1050505221	3300005332	Tropical Forest Soil	MDREHLSMVADKFPWVLSELVLNACGKEAKCCRRERLITPLRLG*
Ga0066689_108821151	3300005447	Soil	MDHGQLSMVADQFHWVVAAALRNACGTDVQVCRRQRVITPLRLGLALTATCASQPGETSAACHCGCHARCGTPVTSQAC
Ga0066682_109616861	3300005450	Soil	MDHGQLSMVADKFQWVFSETLLNACGKETRVCRRERIMTPFRLGLAVVATSASQHVDTLAAFHRGFCAL
Ga0070699_1005640841	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDHGQLSMVADKCQWVFSEALLNACGKDVKFCRRQRVITPFRLGLALTATCASQRVE
Ga0070697_1021096121	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDHGQLSMVADKFQWVFSEALLNACGKEVKFCRRQRVITP
Ga0070696_1019460291	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDHGQLSMVADKFQWVFSESLLNACGKDTKFCRRERIMTPFRLGLALT
Ga0066701_100684593	3300005552	Soil	MDHGQLSMVADTFPWVFSAPLLKACGTEAKFCRRQRLITPLRLGLALTATCASQPVET*
Ga0066661_106549152	3300005554	Soil	MDHRQLSMVADKFQWVFSEALLNGCGKAVKFCRRQRVITPFRLGLALTA
Ga0066704_109263671	3300005557	Soil	MDHGHLSMVADKFQWVFSEPLLNACGKDVKFCRRQRILTPFRLGLALTATCASQRVETIA
Ga0066698_107471111	3300005558	Soil	MDHGHLSMVADKFQWVFSEPLLNACGKDVKFCRRQR
Ga0066698_108234941	3300005558	Soil	MDHGQLSMVADTFPWVFSAPLLKACGTEAKFCRRQRLIT
Ga0066699_105106323	3300005561	Soil	MDHRQLSMVADKFQWVFSESLLNACGTDAKFCRRMRTSTPFRLGLALTATCASQRVETLADFHRGFHA
Ga0066699_105115001	3300005561	Soil	MDHGQLSMMADKFQWVFSEPLLNACGTEVKFCRRQRIITPFRLGLALTATCASQPVETLADF
Ga0066905_1001591781	3300005713	Tropical Forest Soil	MMAKSLFSEALLNGCGKAVKFCRRQRVITPFRLGLALTATCASQR
Ga0066903_1030535291	3300005764	Tropical Forest Soil	MEHGHLSMMADKFHWVLSEPLLNACGTDVQFCRRQRLRTPFRLGLALTATCASQRVETLADFHC
Ga0066903_1055792212	3300005764	Tropical Forest Soil	MDHGQLSMADKVHSMFAEPLLNARGTEAKFCHRQRIIMPGGLSTYLW*
Ga0075427_100217033	3300006194	Populus Rhizosphere	MDHGQLSMVADKFQWVFSEVLLNACGTAAKFCRRRRVITPFRLSLALTATCAS
Ga0066658_108106202	3300006794	Soil	MDHGQLRMVADKFQGVFSAPRLNAWGKDVQFCRRQRVLTPWRLGLALT
Ga0066659_101673311	3300006797	Soil	MDHGQLSMVADTFPWVFSAPLLKACGTEATFCRRQRLITPLRLGLALTATCASQPVET*
Ga0066659_104202141	3300006797	Soil	MDHRQLSMVADKFPWVFSAPLLNACGTDGKFCRRQRVITPCRLALALTAICASQRGETIADFHCGFPALF
Ga0066659_109031141	3300006797	Soil	MDHGQLRMVADTFQGVFSEALLNACGKDVKFCRRQRVITPFRLGLALTATCASQRVETIA
Ga0066659_110220051	3300006797	Soil	MDHGQLSMVADKFPWVFSEALLNACGTEVKFCRRQRTITPLRLGLALTATCASQRVETLADFHRGFKAL
Ga0066659_119186892	3300006797	Soil	MDHGQLSMVADKFQWVFSEALLNAGGTDVKLCRRQRIITPFRLGLALTATCASQRVETIADFPCGFHA
Ga0066660_105272512	3300006800	Soil	MDHGQLSMVADKFQWGFSEALLNACGQDVKLCRRQRVMTPFRLGLALTATCASRRVETIADFHCGFN
Ga0075428_1003082822	3300006844	Populus Rhizosphere	MDREHLSMVADKCQWVFSALRLTACGKEAKCCRRARLSTPFRWGLALTATSARQPGETLADFHRGLKA*
Ga0075428_1007215502	3300006844	Populus Rhizosphere	MDREHLSMVADKFQWVFSELLLNACGKEAKFCRRERLITPFRLG*
Ga0075428_1021873892	3300006844	Populus Rhizosphere	MDHGQLNMVADKFQWVFSEVLLNACGKDVKLCRRQRIITPFRLGLALTATCASQRVE
Ga0075421_1000796227	3300006845	Populus Rhizosphere	MDREHLSMVADKCQWVFSALRLTACGKEAKCCRRARLSTPFRWGLALTATSARQPGETLADFHRGFKA*
Ga0075421_1011208322	3300006845	Populus Rhizosphere	MDHGHLSMAADKFQWVFSESLLNACGREVKFCRRQRVITPFRLG
Ga0075431_1021442521	3300006847	Populus Rhizosphere	MDRGQLSMVADKFQWVFSEVLLNACGKEVKLCRRQRVITPF
Ga0075420_1006726793	3300006853	Populus Rhizosphere	MDREHLSMVADKCQWVFSALRLTACGKEAKCCRRARLSTPFRWGLALTATSARQPGETLADFHRG
Ga0075425_1031065801	3300006854	Populus Rhizosphere	MAADKFQWVFSEALLNACGQETRFCQRARIITPFRLGLALVAISASQQVETLADF
Ga0075429_1019565471	3300006880	Populus Rhizosphere	MDHGQLNMVADKFQWVFSEVLLNACGKDVKLCRRQRIITPFRLGLALTATCASQR
Ga0075424_1005067412	3300006904	Populus Rhizosphere	MEHGQLRMVADKFQWVFSETLLNGCGKAVKLCRRQRVITPFRLGLALTATC
Ga0075419_113169112	3300006969	Populus Rhizosphere	MDREHLSMVADKCQWVFSALRLTACGKEAKCCRRARLSTPFRWGLALTATSARQPGE
Ga0066710_1047448441	3300009012	Grasslands Soil	MDHGQLSMVADTFPWVFSAPLLKACGTEAKFCRRQRLITPLRLGLALTATCASQPVETCADFHRGFKAFWGTT
Ga0099830_117262602	3300009088	Vadose Zone Soil	MDHGQLSMVAEKFQWVFSAPLLNACGTEAKFCRRQRIITPLRLGLALTATCASQPVETLADFH
Ga0099827_109063101	3300009090	Vadose Zone Soil	MDHGQLSMVADKFQWVFSEALLNACGKEAKFCRRQRV
Ga0099827_112063371	3300009090	Vadose Zone Soil	MDHGQLSMVADKFQWMFSEALLNACGKDVKFCRRQRIITPFR
Ga0099827_112302552	3300009090	Vadose Zone Soil	MDHGQLHMVADKFQWVFSESLLNACGKEEKFCRRQRIITPFRLGLALTATCASQAVELVSGHIC*
Ga0099827_116736441	3300009090	Vadose Zone Soil	ESPMDHGQLSMVADKFPWVFAEALRNACGKDGKF*
Ga0099827_118861411	3300009090	Vadose Zone Soil	MDHGQPSMVADKFQWVFSEPLLNACGKDVQFCRRQRVITPFRLGLALTA
Ga0066709_1014849133	3300009137	Grasslands Soil	MDHGQLRMVADTFPWVFSAPLLKACGTEAKFCRRQRLITPLRLGLAL
Ga0066709_1037103831	3300009137	Grasslands Soil	MWLSKPPKECQMDHEQLSMVADKFQWVFSALLLNTCGKEAKFCRRVRLITPFRLGLALTATSASQQ
Ga0066709_1042802372	3300009137	Grasslands Soil	MDHGQLSMVADKFQWGFSEALLNACGQDVKLCRRQRVMTPFRLGLALTATCASRRVET
Ga0114129_113885631	3300009147	Populus Rhizosphere	MWLSKQPKEGQMDREHLSMVADKCQWVFSALRLTACGKEAKCCRRARLSTPFRWGLALTATSARQPGETLADFHRG
Ga0114945_106540571	3300009444	Thermal Springs	MDHGQLSMVADKFQWVFSEPLLNACGTEAKYCRRQRLITPFRLGLALTATCASQPVETLADFH
Ga0105059_10634102	3300009795	Groundwater Sand	MDHGPLSMVADKVQWVFSEALLNACGKDVKFCRRQ
Ga0105072_10159361	3300009818	Groundwater Sand	MSMVADKCQWVFSEALLNACGKDVKFCRRQRVITPFRLGL
Ga0105066_10601982	3300009822	Groundwater Sand	MDHGQLSMVADKCQWVFSEALLNACGKDVKFCRRQRIITPLRLGLALTATCASQRVAT
Ga0126384_107958312	3300010046	Tropical Forest Soil	MDHGQLRMVADKFQWVCSDVLLNACGTAAKFCRRMRPSTPFRFGLALTATCARQRVDILADCHRGF
Ga0126382_103680712	3300010047	Tropical Forest Soil	MVADKFQWVFSEALLNACGQDVKFCRRQRVITPFRLGLALTAPCASPRV
Ga0126382_104571891	3300010047	Tropical Forest Soil	MDHGQLSMVADKFQWVFSEALLNACGTDVKFCRRQRVIAPLRLGLALTA
Ga0126382_108442361	3300010047	Tropical Forest Soil	MDHGQLSMVADKFQWVFSEPLLNACGTDTKFCRRLRTITPFRLGL
Ga0126382_108518221	3300010047	Tropical Forest Soil	MMADKFQWVFSETLLNACGTDVKFCRRQRVITPFRLGLALTATCASQR
Ga0126382_117206671	3300010047	Tropical Forest Soil	MDHEQLSMVADKIQWVFAELLLNACGKEAKFGRRERLITLFRLG*
Ga0134088_102907862	3300010304	Grasslands Soil	MDHGQLNMVADKFQWVFSESLLNACGKDAKFCRRERIITPFRLGLALTATCA
Ga0134080_105900792	3300010333	Grasslands Soil	MDHGQLSMVADKFQWVFSEALLNACGKDVKFCRRQRVITPFRLGLALTA
Ga0134071_106551681	3300010336	Grasslands Soil	MDHEQLSMVADKFQWVFSALLLNTCGKEAKFCRRVRLITPFRLGLALTATSASQQVETLTDFH
Ga0126370_109711101	3300010358	Tropical Forest Soil	MDHGQLSMVADKFQWVFSEALLNACGKEAKFCRRQ
Ga0126376_114105761	3300010359	Tropical Forest Soil	MDHGQLSMVADTLQWVFSAALLNVCGKDVQFCRRQRVLTSFRLG
Ga0126378_119709061	3300010361	Tropical Forest Soil	MDPGQLSMVADKFQWVFSEPLLNACGTDVKFCQRQRVITPLRLGLA
Ga0126378_121242932	3300010361	Tropical Forest Soil	MMADKFQWVFSEPLLNACGTDVKFCQRQRVITPFRLGLALTTTCAS
Ga0105239_133082961	3300010375	Corn Rhizosphere	RKESPMDHGQLSMVADKFQWVFSEPLLNACGKDVKFCRRQRVITPFRLGLST*
Ga0126383_102320103	3300010398	Tropical Forest Soil	MDHGQLSMIADKFQWVFSESLLNACGKAVRFCRRQRVLTPFRLESAKS*
Ga0126383_105281181	3300010398	Tropical Forest Soil	MDHGQLRMVADKFQWVFSEALLNACGTAAKFCRRMRTITPFRL
Ga0126383_130796111	3300010398	Tropical Forest Soil	MDQGQLSMVADKFQWVFSEPLLNACGTEAKFCRRQRIITPFRLGLAL
Ga0137389_113315462	3300012096	Vadose Zone Soil	MDHGQLSMVADKFQWVFSEPLLNACGTEAKFCRRQ
Ga0137388_102508483	3300012189	Vadose Zone Soil	MDHGQLSRVADKFQWVFSESLLNTCGKDVKFCRRTRIITPFRLGLALT
Ga0137364_112581821	3300012198	Vadose Zone Soil	MDHGQLRMVADKFPWVFSEPLLNACGTEAKFCRRQRLITPLRLGLALTATCASP
Ga0137399_104825971	3300012203	Vadose Zone Soil	MDHGQLSMVADKFQWVFSEALLNACGKNVKFCRRQRTITP
Ga0137374_103779112	3300012204	Vadose Zone Soil	MDHGQLRMVADKFQWVFSEPLLNACGTEAKFCRRQRIITPCRLGLALTATCSRQP
Ga0137362_106999691	3300012205	Vadose Zone Soil	MDHGQLSMVADKFQWVFSESLLNACGKDAKFCRRERIITP
Ga0137381_109221481	3300012207	Vadose Zone Soil	MDHGQLSLVADKFQWVFSESLINACGKDAKFCRRERIITPFRLGLA
Ga0137381_110391532	3300012207	Vadose Zone Soil	MDHGQLRMVADTFPWVFSAPLLKACGTEAKFCRRQRLITPLRLGLALTATCASQP
Ga0137376_113273221	3300012208	Vadose Zone Soil	MEHGQLSLVAAKFQWVFSESLLNACGKDAKFCRRERIITPLRLGLALTATCASQRVETLADFHR
Ga0137377_101776781	3300012211	Vadose Zone Soil	MDHGQLRMVADKFQGVFSAPRLNAWGKDVQFCRRQRVLTPWRLGLA
Ga0137387_100979471	3300012349	Vadose Zone Soil	MDHGHLSMAADTFPWVFSASVLNACGKEAQFCRRQRVITPLRLGLALTATCASQHVETIADFHCGFN
Ga0137387_103970763	3300012349	Vadose Zone Soil	MDHGQLSLVADTFPWVFSEPLLNACGKDGKFCRRQRVITPFRLGLALIATCASPRVETI
Ga0137387_105836531	3300012349	Vadose Zone Soil	MVADKFQWVFSEALLNACGKEVKFCRRQRVITPFRLGLALTATCASQ
Ga0137366_105024031	3300012354	Vadose Zone Soil	MDHGQLRMVADKFPWVFSEPLLNACGTEAKFCRRQRIITPCRLGLALTATCARQ
Ga0137384_114668641	3300012357	Vadose Zone Soil	MDHGQLSMIADKFQWVFSESLLNACGTDVKFCRRMRT
Ga0137390_112905632	3300012363	Vadose Zone Soil	MDHGPLSMVADKFQWVFSEPLLNACGTEVKFCRRQRIITPFRLGLALTATCASQ
Ga0137359_104309311	3300012923	Vadose Zone Soil	MDHGQLSMVADKFQWVFSEPLLNACGKDVKFCRRQRVITPFRL
Ga0137410_105102972	3300012944	Vadose Zone Soil	MVADKFQWVFSEALLNACGKDVRFCRRQRIITPFRLGLALTATCAS
Ga0137410_106489972	3300012944	Vadose Zone Soil	MDHGQLSMVADKFQWVFSESLLNTCGKDVKFCRRTRIITPFR*
Ga0164298_111976401	3300012955	Soil	MDHGQLSMVADKFQWVFAASLLNACGKDAKFCRRERIITPFRLGVALTATCASQRVET
Ga0157374_122435811	3300013296	Miscanthus Rhizosphere	MVADKFQWVFSEPRLNACGTKEQFCRRQRIITPFRLRL
Ga0163162_125389731	3300013306	Switchgrass Rhizosphere	MVADKFQWVFSEALLNACGKEAKFCRRQRVITPLRLGLALTATCASQRVETLADFHRGFHVTG
Ga0132258_1002060317	3300015371	Arabidopsis Rhizosphere	MVADKFQWVFSEVLLNACGKEVKLCRRQRVITPFRLGLALTATCASQRVETLA
Ga0132258_138697381	3300015371	Arabidopsis Rhizosphere	MDHGQLSMVAAKFQWVFSEPLLHPWGTEATVCRRPRIITPF
Ga0132257_1004503141	3300015373	Arabidopsis Rhizosphere	MDRGQLSMVADKFQWVFSEVLLNACGKEVKLCRRQRVITPFRLGLALTATCASQRVETLA
Ga0132255_1000736485	3300015374	Arabidopsis Rhizosphere	MVADKFQWVFSEVLLNACGKEVKLCRRQRVITPFRLGLALTATCASQRVET
Ga0132255_1022344791	3300015374	Arabidopsis Rhizosphere	MVADKFQWVFSEPRLNACGTKEQFCRRQRIITPFRLRLALTATCASQRVETL
Ga0182037_100802914	3300016404	Soil	MDHGQLSMVADKFQWVFSEALLNACGKDVRFCRCQRVITPFRLGLALTATCASQHV
Ga0182039_107186172	3300016422	Soil	MDHGQLSMIADKFQWVSSEPLLNACGKDVKFCRRQRVITPFRLGLALTAICASQRVE
Ga0134112_102673691	3300017656	Grasslands Soil	MDRGPLRMIANTFQWVFSEPLLNACGTDVPFCRRQRIITPLRLGL
Ga0134074_14122722	3300017657	Grasslands Soil	MDHGQLSMVADKFQWVFSEALLNACGKDVKFCRRQRVITPF
Ga0163161_103043952	3300017792	Switchgrass Rhizosphere	MDHGHLSMVADKFQWVFSEPLLNACGKDVKLCRRQRL
Ga0184610_11995002	3300017997	Groundwater Sediment	MDHGQLSMVADKFQWVFSEPLLNACGKAVKFCRRQRVITPLRLGL
Ga0184627_100045459	3300018079	Groundwater Sediment	MDHGQLSMVADKFQWVFSEPLLNACGKDVKFCRRPRVITPLRSGLALTA
Ga0066667_117118651	3300018433	Grasslands Soil	MDHGHLSMVADKFQWVFSEPLLNACGTEAKLCRRQRIITPFRLGLALTATCA
Ga0179585_11819581	3300021307	Vadose Zone Soil	MDHGHLSMVADKFQWVFAESLLNACGKDAKFCRRERIITPFRL
Ga0209827_105807491	3300025149	Thermal Springs	MDHGQLSMVADKFQWVFSEPLLNACGTEVKFCRRQRIITPFRLGLALT
Ga0209827_111703971	3300025149	Thermal Springs	MEHGQLSMVADKCQWVCAAALLNACGKDGQFCRRQRVITPLRLGLALTATCASQRVETM
Ga0207684_109466791	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDHGQLSMVADKFQWVFSEALLNACGKETRFCRRERLMTPFRLGLALVATSASHSVDTLADF
Ga0207691_101575161	3300025940	Miscanthus Rhizosphere	MDHGQLSMVADKFQWVFSEPLLNACGQDVKFCRRQRVITPFRLGLALT
Ga0207689_110715091	3300025942	Miscanthus Rhizosphere	MEHGHLSMVADKFQWVFSEPRLNACGTKEQFCRRQRIITPFRLRLTLTATCASQRVETLADFQRGCNALWGTT
Ga0207675_1000707815	3300026118	Switchgrass Rhizosphere	MDHGQLSMVADKFQWLFSEPLLNACGTEAKFCRRQRIITP
Ga0209469_10976182	3300026307	Soil	MDHGQLRMVADTFPWVFSAPLLKACGTEAKFCRRQRLITPL
Ga0209268_11143892	3300026314	Soil	MVADKFQWVFSETLLNACGKEARFCRRQRIITPFRLGLALTATCA
Ga0209471_12344472	3300026318	Soil	MDHGQLSMVADKFQWVFSESLLNACGKDTKFCRRE
Ga0209152_101588202	3300026325	Soil	MDHRQLSMVADKFQWVFSEPLLNACGKDVKFCRRQRVITPFRLGLALTATCAS
Ga0209152_105016721	3300026325	Soil	MDHGQLSMVADKFQWVFSESLLNASGKDAKLCRRERIITPFRLGLAL
Ga0209804_11031542	3300026335	Soil	MDHRQLSMVADKFPWVFSAPLLNACGTDGKFCRRQRVITPCRLALALTAICASQRV
Ga0209690_10824093	3300026524	Soil	MDHGQLSMVADTFPWVFSAPLLKACGTEATFCRRQRLITPLRLGLALTATCASQPVET
Ga0209056_101622691	3300026538	Soil	MDHEQLSMVADKFQWVFSELLLNTCGKEAKFCRRVR
Ga0179593_11305733	3300026555	Vadose Zone Soil	MDHGQLSMVADKFQWVFSESLLNACGKDAKFCRRERIITPFAWGWL
Ga0209874_10251101	3300027577	Groundwater Sand	MDHGQLSMVADKCQWVFSEALLNACGKDVKFCRRQRIITPLRLGLALTATCASQRVATSADLHGGFHALFG
Ga0209574_101206182	3300027809	Agave	MVADKFQWVFSEALLNACGTDVKFCRRQRLIRPFRLG
Ga0209465_102364442	3300027874	Tropical Forest Soil	MDHGHLSMMADKFQWVFSEALLNACGTDVKFCRRQRILTPFRLGLAL
Ga0209590_100838083	3300027882	Vadose Zone Soil	MDHGQLSMVADKFQWVFAESLLNACGKDAKFCRRERIITPFRLGLALTATCASQR
Ga0209590_105505281	3300027882	Vadose Zone Soil	MDHGHLSMVADKFQWVFSEARLNACGKEGKFCRRQRTITPLRLGLALTATCASQRVD
Ga0209488_105108533	3300027903	Vadose Zone Soil	MDHGQLSMVADKCPWVFSEPLLNACGKDVKCCRRQRVITP
Ga0209382_111837351	3300027909	Populus Rhizosphere	MDHGHLSMAADKFQWVFSESLLNACGKEVKFCRRQRVIT
Ga0268264_113241331	3300028381	Switchgrass Rhizosphere	MEHGHLSMVADKFQWVFSEPRLNACGTKEQFCRRQRIITPFRLRLTLTATCASQRVETLADFQRGCNALWGTTIT
Ga0247822_114050412	3300028592	Soil	MDHRQLSMVADKFQWVFSETLLNTCGKDTKFCRRQRTMTPFRLGLALTATCASHRVETLADFPPRLQGVV
Ga0247826_101896941	3300030336	Soil	MVADKFQWVFSEPLLNACGKDVKLCRRQRLLTPFRLALAL
Ga0247612_10153301	3300030592	Soil	MDHGQLRMVADKFQWVFSEALLNTCGKDTKFCRRQRTMTPFRLGLA
Ga0247627_100299382	3300030635	Soil	MDHGQLSMVADKFQWVFSEALLNTCGKDTKFCRRQRTITPFRLG
Ga0308187_102309542	3300031114	Soil	MDHGQLRMVADQFPWVCAEALLNTGGKKGRFCRRQRPITPLRLGLALTATCASPRVEPLADVSRGFQAVCDT
Ga0318574_100738002	3300031680	Soil	MDHGQLSMVADKFQWVVSEALLNACGTAAKFCRRGR
Ga0307468_1019417821	3300031740	Hardwood Forest Soil	MDHGHLSMVADKFQWVFSEPLLNACGKGVKFCRRQRILT
Ga0306921_103355572	3300031912	Soil	MDHGQLSMVADKFQWVFSEALLNACGKDVRFCHRERT
Ga0310916_115608662	3300031942	Soil	MDHGQLTMVADKFQWVFSEALLNACGKDVKLCRRQRIITPFRLGLALTATCASQRVETI
Ga0318559_100304661	3300032039	Soil	MDHGQLSMVADKFQWVVSEALLNACGTAAKFCRRRRTITPFRVGLARTATCARQRVDTVA
Ga0318514_101612342	3300032066	Soil	MDHGQLSMVADKFQWVFSEALLNACGKDVRFCHRE
Ga0307472_1015255691	3300032205	Hardwood Forest Soil	MDHGQLSMVADKFQWVFSESLLNACGKDAKFCRRERIIT

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign