Metagenome / Metatranscriptome Family F051315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	42 residues
Representative Sequence	YMKQLKYIRQVSREFPEKIGEVSDAKLPAEAKQRLKEALRQ
Number of Associated Samples	102
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.89 %
% of genes near scaffold ends (potentially truncated)	82.64 %
% of genes from short scaffolds (< 2000 bps)	90.97 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.778 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.38% β-sheet: 0.00% Coil/Unstructured: 53.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF13564	DoxX_2	20.14
PF06772	LtrA	5.56
PF08281	Sigma70_r4_2	4.86
PF03358	FMN_red	4.86
PF10049	DUF2283	4.17
PF05742	TANGO2	3.47
PF04542	Sigma70_r2	2.08
PF03928	HbpS-like	2.08
PF04255	DUF433	1.39
PF09335	SNARE_assoc	1.39
PF08240	ADH_N	1.39
PF12833	HTH_18	1.39
PF00891	Methyltransf_2	0.69
PF05635	23S_rRNA_IVP	0.69
PF05016	ParE_toxin	0.69
PF03308	MeaB	0.69
PF00583	Acetyltransf_1	0.69
PF13278	Obsolete Pfam Family	0.69
PF07681	DoxX	0.69
PF15919	HicB_lk_antitox	0.69
PF05163	DinB	0.69
PF13414	TPR_11	0.69
PF13673	Acetyltransf_10	0.69
PF01022	HTH_5	0.69
PF07927	HicA_toxin	0.69
PF00176	SNF2-rel_dom	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	5.56
COG3332	Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motif	General function prediction only [R]	3.47
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.08
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.08
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.08
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.08
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.39
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.39
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.39
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.39
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.69
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.69
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	43.75 %
Unclassified	root	N/A	4.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	43.75 %
Unclassified	root	N/A	4.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	33.33 %
Unclassified	root	N/A	4.17 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.69 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.08 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.69 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	2.08 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.69 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.69 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.08 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.69 %
Fulvivirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae	0.69 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.08 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.69 %
Fulvivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga	0.69 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.08 %
Fulvivirga imtechensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis	0.69 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.69 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.33 %
Unclassified	root	N/A	4.17 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2.08 %
Fulvivirga imtechensis AK7	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis → Fulvivirga imtechensis AK7	0.69 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.69 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002GNSZX	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
2170459003\|FZ032L002HBX18	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
2189573004\|GZGWRS401DSFLK	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
2189573004\|GZGWRS402G7UPH	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100376094	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300000789\|JGI1027J11758_12021945	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300000955\|JGI1027J12803_107268135	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300000956\|JGI10216J12902_109507277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1084	Open in IMG/M
3300001431\|F14TB_100393494	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300001867\|JGI12627J18819_10468148	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300004479\|Ga0062595_100237096	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005166\|Ga0066674_10292660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300005166\|Ga0066674_10298301	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005181\|Ga0066678_10311995	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005186\|Ga0066676_10509986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300005187\|Ga0066675_10081274	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300005187\|Ga0066675_10169321	All Organisms → cellular organisms → Bacteria → Proteobacteria	1513	Open in IMG/M
3300005332\|Ga0066388_100005261	All Organisms → cellular organisms → Bacteria	8979	Open in IMG/M
3300005332\|Ga0066388_102728908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	902	Open in IMG/M
3300005332\|Ga0066388_103545495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	797	Open in IMG/M
3300005332\|Ga0066388_103986662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005439\|Ga0070711_102038380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005447\|Ga0066689_10367089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300005450\|Ga0066682_10219540	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005450\|Ga0066682_10568873	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005552\|Ga0066701_10032458	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300005553\|Ga0066695_10703000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300005556\|Ga0066707_10405518	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005556\|Ga0066707_10543824	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005556\|Ga0066707_10587157	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005559\|Ga0066700_10050099	All Organisms → cellular organisms → Bacteria	2561	Open in IMG/M
3300005566\|Ga0066693_10094656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1070	Open in IMG/M
3300005576\|Ga0066708_10717622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300005586\|Ga0066691_10896958	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_101433419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1299	Open in IMG/M
3300005764\|Ga0066903_103881054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300005764\|Ga0066903_106416991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	613	Open in IMG/M
3300005937\|Ga0081455_10018532	All Organisms → cellular organisms → Bacteria → Proteobacteria	6625	Open in IMG/M
3300006034\|Ga0066656_10052254	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300006046\|Ga0066652_100341599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300006046\|Ga0066652_101892259	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006175\|Ga0070712_101568511	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006791\|Ga0066653_10140895	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300006796\|Ga0066665_10889664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300006796\|Ga0066665_10909261	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006797\|Ga0066659_11388899	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300006797\|Ga0066659_11905861	Not Available	505	Open in IMG/M
3300009088\|Ga0099830_10505727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	986	Open in IMG/M
3300009137\|Ga0066709_100135924	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300009137\|Ga0066709_102047884	Not Available	792	Open in IMG/M
3300009137\|Ga0066709_104012911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300010301\|Ga0134070_10444685	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010321\|Ga0134067_10461293	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga → Fulvivirga imtechensis → Fulvivirga imtechensis AK7	520	Open in IMG/M
3300010322\|Ga0134084_10194220	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300010325\|Ga0134064_10058195	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300010329\|Ga0134111_10490596	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010333\|Ga0134080_10028638	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300010361\|Ga0126378_11013227	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300010366\|Ga0126379_10593905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1192	Open in IMG/M
3300010398\|Ga0126383_11844791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300012189\|Ga0137388_11785391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012198\|Ga0137364_10362739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1082	Open in IMG/M
3300012198\|Ga0137364_10886506	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012198\|Ga0137364_11213089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300012198\|Ga0137364_11250505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300012199\|Ga0137383_10299935	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300012199\|Ga0137383_10488859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300012199\|Ga0137383_10553182	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300012199\|Ga0137383_10733243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300012199\|Ga0137383_10823034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300012200\|Ga0137382_10598344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300012201\|Ga0137365_10292721	Not Available	1207	Open in IMG/M
3300012201\|Ga0137365_10364019	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012201\|Ga0137365_10599032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300012201\|Ga0137365_10973786	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012202\|Ga0137363_11246964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300012202\|Ga0137363_11643107	Not Available	535	Open in IMG/M
3300012205\|Ga0137362_10070533	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300012207\|Ga0137381_11459423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	576	Open in IMG/M
3300012207\|Ga0137381_11666568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012208\|Ga0137376_10693670	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300012210\|Ga0137378_11409158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300012211\|Ga0137377_11158431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300012211\|Ga0137377_11219014	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012211\|Ga0137377_11415310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	623	Open in IMG/M
3300012285\|Ga0137370_10582625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300012355\|Ga0137369_10507836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300012356\|Ga0137371_10585299	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012356\|Ga0137371_10873028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300012356\|Ga0137371_11186783	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012356\|Ga0137371_11197814	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012357\|Ga0137384_11106879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	634	Open in IMG/M
3300012359\|Ga0137385_10348994	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300012360\|Ga0137375_10552684	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300012532\|Ga0137373_11253479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012924\|Ga0137413_11081596	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012929\|Ga0137404_10582453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300012975\|Ga0134110_10217685	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012975\|Ga0134110_10271873	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012977\|Ga0134087_10556523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300013296\|Ga0157374_12711799	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300015053\|Ga0137405_1314391	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300015357\|Ga0134072_10123518	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300015357\|Ga0134072_10200777	Not Available	690	Open in IMG/M
3300015359\|Ga0134085_10262989	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300015359\|Ga0134085_10404552	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300015372\|Ga0132256_100039209	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300015373\|Ga0132257_100825925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1158	Open in IMG/M
3300015373\|Ga0132257_104580116	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300015374\|Ga0132255_104850498	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300016319\|Ga0182033_11969402	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300016341\|Ga0182035_11337343	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300016371\|Ga0182034_10320566	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300016371\|Ga0182034_12081486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300016387\|Ga0182040_10701048	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300017654\|Ga0134069_1129642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300017656\|Ga0134112_10142749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300018433\|Ga0066667_10574880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300018482\|Ga0066669_11074623	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300025941\|Ga0207711_12090530	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300026307\|Ga0209469_1022461	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300026322\|Ga0209687_1126050	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300026323\|Ga0209472_1159024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	833	Open in IMG/M
3300026329\|Ga0209375_1157403	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300026329\|Ga0209375_1165777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300026331\|Ga0209267_1019165	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300026530\|Ga0209807_1077172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1482	Open in IMG/M
3300026532\|Ga0209160_1110179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1375	Open in IMG/M
3300026537\|Ga0209157_1039034	All Organisms → cellular organisms → Bacteria	2643	Open in IMG/M
3300026538\|Ga0209056_10217410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1383	Open in IMG/M
3300027882\|Ga0209590_10822765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300030916\|Ga0075386_11962581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1311	Open in IMG/M
3300031122\|Ga0170822_11334330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	821	Open in IMG/M
3300031231\|Ga0170824_114436556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300031446\|Ga0170820_10877657	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300031469\|Ga0170819_16476839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1770	Open in IMG/M
3300031719\|Ga0306917_10578155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300031719\|Ga0306917_11275441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	569	Open in IMG/M
3300031744\|Ga0306918_11126896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300031879\|Ga0306919_11122611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300031912\|Ga0306921_11273691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300031912\|Ga0306921_12539239	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031954\|Ga0306926_12781288	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300032261\|Ga0306920_101838731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.14%
Host-Associated	Host-Associated	4.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.14%
Plants	Host-Associated → Plants	4.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.08%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.08%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.39%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_03456820	2170459003	Grass Soil	MCSFCERYARQLNYMREVARKFPEKIGEISGATLPTEAKERLKEALRR
E4A_05314240	2170459003	Grass Soil	YAKQLNYIREVAREFPEKIGEVSDATLPTEAKERLKETLRR
FG2_05479450	2189573004	Grass Soil	CERYAKQLNYMRQVAREFPEKIGEVSDATLPAEAKQRLKEALRQ
FG2_02524200	2189573004	Grass Soil	NYMREVAPPTFPKKIGEISDATLPTEAKERLKETLRR
INPhiseqgaiiFebDRAFT_1003760941	3300000364	Soil	CSFCERYAKQLKYMRIVAREFPEKIGEVSDAKLPADAKERLKQALRQ*
JGI1027J11758_120219453	3300000789	Soil	FCERYAKQLKYMRIVAREFPEKIGEVSDAKLPADAKERLKQALRQ*
JGI1027J12803_1072681352	3300000955	Soil	YMKQLKYIRQVSREFPEKIGEVSDASLSAGAKEQIKGALRRQ*
JGI10216J12902_1095072773	3300000956	Soil	LKYMRHVAREFPEKIGEISDATLPITAKERMKAALRQ*
F14TB_1003934942	3300001431	Soil	LKYIRQVSREFPEKIGDVSDASLPTEAKERMKAALR*
JGI12627J18819_104681481	3300001867	Forest Soil	KQLKYIRQVSREFPEKIGDVSDASLPVDAKERMKAALR*
Ga0062595_1002370962	3300004479	Soil	MKQLKYIREVSREFPNKIGDVSDASLTADAKEQIKAALRQ*
Ga0066674_102926603	3300005166	Soil	YLMCSFCARYAKQLNYMREVAREFPEKIGEVSDATLPTEAKQRLKEALRR*
Ga0066674_102983012	3300005166	Soil	MCSFCERYAKQLKYMREVAREFPEKIGEISDAKLPTEAKERLKEALRQ*
Ga0066678_103119951	3300005181	Soil	CQRYMKQLKYMRQVAREFPEKIGDVSDATLPSEVKQRLKESLRS*
Ga0066676_105099863	3300005186	Soil	KQLNYMREVAREFPEKIGEVSEATLPTEAKERLKEALRQ*
Ga0066675_100812744	3300005187	Soil	MKQLKYIRQVSREFPDKIGEVSDGSLSADAKEQIKAALRQ*
Ga0066675_101693213	3300005187	Soil	FCQRYMKQLKYIRQVSREFPDKIGELSDAALPADAKERIKAALRE*
Ga0066388_10000526110	3300005332	Tropical Forest Soil	MKQLKYMRQVAREFPEKIGEVSNASLSPDAKERMKAALRS*
Ga0066388_1027289082	3300005332	Tropical Forest Soil	MCSFCKRYMKQLKYIRQVSREFPEKIGEVSDASLPADAKEQMKAALREQKF*
Ga0066388_1035454952	3300005332	Tropical Forest Soil	YMKQLKYIRQVSREFPEKIGEVSNAALPPDAKERIKSALRS*
Ga0066388_1039866622	3300005332	Tropical Forest Soil	MKQLKYIRQVSREFPEKIGEISDAKLSTEAKERLKEALRQ*
Ga0070711_1020383801	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ERYMQQLKYIHQVAREFPEKIGEISDATLPITAKERMKAALRQ*
Ga0066689_103670892	3300005447	Soil	LMCSFCERYMKQLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0066682_102195401	3300005450	Soil	MKQLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0066682_105688731	3300005450	Soil	LMCSFCERYAKQLKYMRTVAREFPDKIGEISDAKLPSEAKQRLKEALRQ*
Ga0066701_100324581	3300005552	Soil	NYIREVSREFPKKIGEVSNATLPAEAKQRLKEALRQ*
Ga0066695_107030001	3300005553	Soil	LNYMREVAREFPEKIGEVSEATLPTEAKQRLKEALRQ*
Ga0066707_104055181	3300005556	Soil	YMEQLKYMRQVAREFPEKIGDVSDATLPSEVKQRLKESLRS*
Ga0066707_105438242	3300005556	Soil	RYAKQLKYMRTVARDFPEKIGEVSDASLPDGAKERMKAALRQ*
Ga0066707_105871571	3300005556	Soil	QLHYMREVARKSPEQADEIPDAKLPADAKERLKAALR*
Ga0066700_100500992	3300005559	Soil	MKQLKYIREVSREFPEKIGEVSDASLSADAKERMKAALRE*
Ga0066693_100946561	3300005566	Soil	MKQLKYIRQVSREFPEKIGEVSDAKLPAEAKQRLKEALR
Ga0066708_107176221	3300005576	Soil	YMQQLKYIRQVAREFPEKIGEISDATLPITAKERMKAALLE*
Ga0066691_108969582	3300005586	Soil	MKQLKYIRQVSREFPDKIGEISDATLPAEAKQRLKEALRQ*
Ga0066903_1014334194	3300005764	Tropical Forest Soil	LKYMRAVAREFPEKIGQLSDAKLPTDARARLKEALRK*
Ga0066903_1038810542	3300005764	Tropical Forest Soil	MCSFCERYMKQLQYIRQVSREFPSKIGEVSETSLPADAKERMKASLRDE*
Ga0066903_1064169911	3300005764	Tropical Forest Soil	MCSFCERYMKQLKYIRQVSREFPERIGEVSDASLPADAKERMKAALRQ*
Ga0081455_100185325	3300005937	Tabebuia Heterophylla Rhizosphere	MKQLKYIRQVSREFPDKIGEISDATLSADAKEQIKAAMRQ*
Ga0066656_100522543	3300006034	Soil	YMREVAREFPEKIGEVSDAKLPAEAKERLKEALRQ*
Ga0066652_1003415992	3300006046	Soil	QRYMKQLKYIRQVSREFPDKIGELSDAALPADAKERIKAALRE*
Ga0066652_1018922592	3300006046	Soil	KQLKYMRQVAREFPEKIGDVSDATLPSEVKQRLKESLRS*
Ga0070712_1015685112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FCERYMKQLKYIRQVSREFPDKIGEVSHASLSVDAKEQIKAALRQ*
Ga0066653_101408954	3300006791	Soil	CERYAKQLNYMREVAREFPEKIGEVSDAKLPTEAKERLKEALRQ*
Ga0066665_108896643	3300006796	Soil	CERYMKQLKYIRQVSREFPDKIGEISDATLPAEAKQRLKEALRQ*
Ga0066665_109092612	3300006796	Soil	YLMCSFCARYAKQLNYMREVAREFPEKIGEVSDATLPTEAKERLKEALRQ*
Ga0066659_113888992	3300006797	Soil	ERYMKQLKYMRQVAREFPDKIGEVSHAKLPFEVKQRLKESLRS*
Ga0066659_119058611	3300006797	Soil	HYFMCSFCERYAKQLKYMRTVAHEFPEKIGEVSDAKLPTEAKQRLKEALRQ*
Ga0099830_105057274	3300009088	Vadose Zone Soil	LNYMREVAREFPEKIGEVSDAKLPTEAKERLKEALRQ*
Ga0066709_1001359249	3300009137	Grasslands Soil	CARYAKQLTYMRTVAREFPEKIGEVSDAKLPTEAKERLKEALRQ*
Ga0066709_1020478842	3300009137	Grasslands Soil	YMKQLKYIRQVSREFPEKIGEVSDAKLPAEAKQRLKEALRQ*
Ga0066709_1040129112	3300009137	Grasslands Soil	MKQLKYIRQVSREFPEKIGEISDATLPAEAKQRLKEALRQ*
Ga0134070_104446851	3300010301	Grasslands Soil	SFCERYAKQLNYMREVAREFPEKIGEVSEATLPTEAKERLKEALRQ*
Ga0134067_104612932	3300010321	Grasslands Soil	FCERYMKQLKYIREVSREFPEKIGEVSDASLSADAKERMKAALRE*
Ga0134084_101942201	3300010322	Grasslands Soil	KQLKYMRTVAREFPDKIGEISDAKLPSEAKQRLKEALRQ*
Ga0134064_100581953	3300010325	Grasslands Soil	LMCSFCERYMKQLKYTREVSREFPEKIGEVSDASLSADAKERMKAALRE*
Ga0134111_104905962	3300010329	Grasslands Soil	FCERYMKQLKYIRQVSREFPEKIGEVSDASLSADAKEQIRAALRQ*
Ga0134080_100286385	3300010333	Grasslands Soil	AKQLNYMREVAREFPEKIGEVSEATLPTEAKERLKEALRQ*
Ga0126378_110132272	3300010361	Tropical Forest Soil	MCSFCERYAKQLKYMRTVAREFPEKIGEVSDAKLPVEARERLKQALRR*
Ga0126379_105939052	3300010366	Tropical Forest Soil	MCSFCERYAKQLKYMRAVAREFPEKIGQISDTKLPTDARARLKEALRK*
Ga0126383_118447911	3300010398	Tropical Forest Soil	MKQLKYIRQVSHEFPNKIGEISDASLPADAKERMKAALRQ*
Ga0137388_117853912	3300012189	Vadose Zone Soil	FCERYAKQLNYMREVAREFPEKIGEISDAALPAEAKQRLKEALRQ*
Ga0137364_103627391	3300012198	Vadose Zone Soil	RYAKQLKYMREVSREFPEKIGEVSDAKLPAEAKQRLKEALRH*
Ga0137364_108865062	3300012198	Vadose Zone Soil	MKQLKYMRHVAHEFPEKIGDVSDATLSLNAKERIKAALRS*
Ga0137364_112130892	3300012198	Vadose Zone Soil	CSFCERYAKQLKYMREVAREFPEKIGEVSDATLPTEAKQRLKEALRQ*
Ga0137364_112505051	3300012198	Vadose Zone Soil	YAKQLNYMREVAREFPEKIGEVSDAKLPAEAKQRLKEAMRQ*
Ga0137383_102999351	3300012199	Vadose Zone Soil	QLNYMREVAREFPEKIGEISDATLPAEAKQRLKEALRQ*
Ga0137383_104888592	3300012199	Vadose Zone Soil	ERYAKQLKYMRIVAREFPDKIGEVSDAKLPSEAKQRLKEALRR*
Ga0137383_105531821	3300012199	Vadose Zone Soil	KQLKYMRTVAHEFPEKIGEVSDAKLPTEAKERLKQALRQ*
Ga0137383_107332431	3300012199	Vadose Zone Soil	MKQLKYIRQVSREFPEKIGEVSDAKLPAEAKQRLKEALRQ*
Ga0137383_108230341	3300012199	Vadose Zone Soil	KQLNYIREVSREFPEKIGVVSDATLPAEAKQRLNEALRQEK*
Ga0137382_105983441	3300012200	Vadose Zone Soil	MKQLEYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0137365_102927213	3300012201	Vadose Zone Soil	AKQLKYMREVAHEFPEKIGEVSDATLPNEAKERLKEALRQ*
Ga0137365_103640191	3300012201	Vadose Zone Soil	FCERYAKQLNYMREVAREFPEKIGDVSDATLPAEAKQRLKEALRQ*
Ga0137365_105990321	3300012201	Vadose Zone Soil	LMCSFCQRYMKQLKYIRQVSRDFPEKIGEVSDAKLPAEAKQRLKEALRQ*
Ga0137365_109737862	3300012201	Vadose Zone Soil	YMKQLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRRQ*
Ga0137363_112469642	3300012202	Vadose Zone Soil	MKQLKYIRQVSREFPEKVGEVSDATLPAEAKQRLKEALRE*
Ga0137363_116431071	3300012202	Vadose Zone Soil	ERYAKQLNYMREVARQFPEKIGEISDATLPAEAKQRLKEALRQ*
Ga0137362_100705331	3300012205	Vadose Zone Soil	KQLKYMRTVAHEFPEKIGEVSDAKLPAEAKERLKEALRQ*
Ga0137381_114594232	3300012207	Vadose Zone Soil	FCERYAKQLKYMRIVAREFPDKIGEVSDAKLPSEAKQRLKEALRQ*
Ga0137381_116665682	3300012207	Vadose Zone Soil	MKQLKYIRQVSREFPEKIGEVSDAKLPTEAKQRLKEALRQ*
Ga0137376_106936703	3300012208	Vadose Zone Soil	AKQLNYMREVAREFPEKIGEVSDAKLPVEAKQRLKEALRQ*
Ga0137378_114091581	3300012210	Vadose Zone Soil	LNYMREVAREFPEKIGEISGATLPTEAKERLKEALRR*
Ga0137377_111584311	3300012211	Vadose Zone Soil	IRQVSREFPDKIGEVSGASLSADAKEQIKAALRQ*
Ga0137377_112190141	3300012211	Vadose Zone Soil	VHYLMCSFCERYAKQLNYMREVAREFPEKIGEVSDAKLPTEAKERLKEALRQ*
Ga0137377_114153101	3300012211	Vadose Zone Soil	QLKYMREVSREFPEKIGEVSDVTLPTEAKERLKEALRQ*
Ga0137370_105826252	3300012285	Vadose Zone Soil	MKQLKYIRQVSREFPDKIGEISDAKLPTEAKQRLKEALRQLNKTG*
Ga0137369_105078361	3300012355	Vadose Zone Soil	RYAKQLNYMREVAREFPEKIGEVSDAKLPTDAKERLKEALRQ*
Ga0137371_105852993	3300012356	Vadose Zone Soil	YMREVAREFPEKVGEVSDAKLPTEAKERLKEALRQ*
Ga0137371_108730282	3300012356	Vadose Zone Soil	KQLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0137371_111867832	3300012356	Vadose Zone Soil	QLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRRQ*
Ga0137371_111978142	3300012356	Vadose Zone Soil	RYAKQLNYMREVAREFPEKIGEISDAKLPTEAKERLKEALRQ*
Ga0137384_111068791	3300012357	Vadose Zone Soil	YAKQLNYMREVAREFPEKIGEISDAKLPAEAKQRLKEALQH*
Ga0137385_103489943	3300012359	Vadose Zone Soil	CVRYAKQLNYMREVAREFPEKIGEVSDATLPTEAKERLKEALRQ*
Ga0137375_105526843	3300012360	Vadose Zone Soil	YIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0137373_112534792	3300012532	Vadose Zone Soil	AKQLNYMREVAREFPEKIGEVSDATLPAEAKERLKEALRQ*
Ga0137413_110815962	3300012924	Vadose Zone Soil	QRYMKQLKYIRQVSREFPEKIGEVSDASLSTDAKERMKAALRE*
Ga0137404_105824531	3300012929	Vadose Zone Soil	MKQLSYIRQVSREFPDKIGKISDATLPAEAKQRLKEALRQ*
Ga0134110_102176851	3300012975	Grasslands Soil	MCSFCQRYMKQLKYIRQVSREFPDKIGELSDAALPADAKERIKAALRE*
Ga0134110_102718732	3300012975	Grasslands Soil	YLMCSFCERYMKQLKYIRQVSREFPDKIGEVSDASLSADAKERMKAALRE*
Ga0134087_105565232	3300012977	Grasslands Soil	MREVAREFPEKIGEISGATLPTEAKERLKEALRR*
Ga0157374_127117991	3300013296	Miscanthus Rhizosphere	QLKYIREVSREFPHKIGDVSDASLTADAKEQIKAALRQ*
Ga0137405_13143911	3300015053	Vadose Zone Soil	SFCEMCSFCERYMRQLKYIRQVSREFPDKIGEVSDASLSADAKEQIKAALRQ*
Ga0134072_101235181	3300015357	Grasslands Soil	MCSFCERYMKQLKYIRQVSREFPDKIGEVSDASLSADAKERMKAALRE*
Ga0134072_102007771	3300015357	Grasslands Soil	MHTVAREFPEKIGEVSDAKLPPETKERLKEALRQ*
Ga0134085_102629893	3300015359	Grasslands Soil	FCERYMKQLKYIRQVSREFPEKIGEVSDATLPAEAKQRLKEALRQ*
Ga0134085_104045522	3300015359	Grasslands Soil	FCERYMKQLKYIRQVSREFPEKIGEVSDASLSADAKEQIKAALRQ*
Ga0132256_1000392096	3300015372	Arabidopsis Rhizosphere	LKYIREVSREFPEKIGEVSDASLPADAKERMKAALRQ*
Ga0132257_1008259253	3300015373	Arabidopsis Rhizosphere	FCQRYMEQLKYMRHVAREFPEKIGDVSEAKLPSDVKERMRESLRS*
Ga0132257_1045801162	3300015373	Arabidopsis Rhizosphere	YMKQLKYIRQVSREFPDKIGEVSDAKLPAEAKARMKEALQQ*
Ga0132255_1048504982	3300015374	Arabidopsis Rhizosphere	KQLKYIREVSREFPAKIGEVSDATLSADAKQRMKAALRD*
Ga0182033_119694021	3300016319	Soil	CERYTKQLKYMHTVAKEFPEKMGEISDAKLPSEVKTRMKDALRQ
Ga0182035_113373431	3300016341	Soil	KYIRQVSREFPEKIGEVSDASLHADAKERMKAALRQ
Ga0182034_103205661	3300016371	Soil	LKYMRQASREFPEKIGEISDAKLPAEVKTRMKDALRQ
Ga0182034_120814863	3300016371	Soil	MKQQKYIHEESRQFQQKIGDVSDASLPADAKERMKAALRQ
Ga0182040_107010482	3300016387	Soil	YAKQLKYMRTVAREFPEKIGETSDEKLPADAKQRMKEALRQ
Ga0134069_11296422	3300017654	Grasslands Soil	NYMREAAHEFPEKIGEVSDATLPAEAKQRLKEALRQ
Ga0134112_101427492	3300017656	Grasslands Soil	LKYMREVAREFPEKIGEVSDAKLPAEAKERLKEALR
Ga0066667_105748803	3300018433	Grasslands Soil	LMCSFCERYMKQLKYIRQVSREFPDKIGEISGATLPAEAKQRLKEALRQ
Ga0066669_110746231	3300018482	Grasslands Soil	QLEYIRQVSREFPDKIGEVSDASLSADAKQQIKAALRR
Ga0207711_120905301	3300025941	Switchgrass Rhizosphere	LMCSFCERYMKQLKYIRQVSREFPDKIGDVSDASLSADAKEQIKAALRQ
Ga0209469_10224614	3300026307	Soil	QLKYMRTVAREFPDKIGEISDAKLPSEAKQRLKEALRQ
Ga0209687_11260503	3300026322	Soil	CERYMKQLKYMRQVAREFPDKIGEVSHAKLPFEVKQRLKESLRS
Ga0209472_11590241	3300026323	Soil	ERYMKQLKYIRQVSREFPEKIGEVSDAKLPTEAKERLKEALRR
Ga0209375_11574033	3300026329	Soil	CSFCERYAKQLKYMRTVAREFPDKIGEISDAKLPSEAKQRLKEALRQ
Ga0209375_11657772	3300026329	Soil	SFCERYAKQLNYMREVAREFPEKIGEISDATLPAEAKQRLKEALRQ
Ga0209267_10191654	3300026331	Soil	MKQLKYIRQVSREFPDKIGEISDATLPAEAKQRLKEALRQ
Ga0209807_10771724	3300026530	Soil	MKQLKYIRQVSREFPEKIGEVSDPTLTEEAKQRLKEALRR
Ga0209160_11101791	3300026532	Soil	YLMCSFCERYMKQLKYIRQVSREFPDKIGEISDATLPAEAKQRLKEALRQ
Ga0209157_10390341	3300026537	Soil	CERYAKQLKYMREVAREFPEKIGEVSDAKLPAEAKERLKEALRQ
Ga0209056_102174101	3300026538	Soil	CERYMKQLKYIRQVSREFPDKIGEISGATLPAEAKQRLKEALRQ
Ga0209590_108227652	3300027882	Vadose Zone Soil	CERYAKQLKYMREVAREFPEKIGEISDATFPAEAKQRLKEALRQ
Ga0075386_119625812	3300030916	Soil	MKQLKYIREVSREFPDKIGEVSDAALTADAKERMKAALRE
Ga0170822_113343302	3300031122	Forest Soil	SFCERYAKQLNYMRQVAREFPEKIGEVSDATLPAEAKQRLKEALRQ
Ga0170824_1144365561	3300031231	Forest Soil	LNYMRQIAREFPEKIGEVSDATLPAEAKQRLKEALRQ
Ga0170820_108776571	3300031446	Forest Soil	LKYIRQVSREFPDKIGEVSDAALPADAKERMKTALRE
Ga0170819_164768393	3300031469	Forest Soil	MKQLKYIREVSREFPDKIGEVSDAGLPADAKERMKAALRE
Ga0306917_105781553	3300031719	Soil	LKYIRQVSREFPEKIGDVSGASLPAGAKERMKAALRQ
Ga0306917_112754412	3300031719	Soil	KYMRQVSREFPEKIGEISDAKLPAEVKTRMKDALRQ
Ga0306918_111268961	3300031744	Soil	YLMCSFCERYMKQLKYIRQVSREFPEKIGDVSDASLPADAKERMKAALRQ
Ga0306919_111226112	3300031879	Soil	CERYAKQLKYMRTVAREFPEKIGEISDAKLPTEAKERLKEALLK
Ga0306921_112736911	3300031912	Soil	MKQLKYIRQVSREFPDKIGEVSDASLPADAKVQMKAALRQ
Ga0306921_125392391	3300031912	Soil	KYIRQVSREFPNKIGEVSDAKLPAEAKQRLKEALRQ
Ga0306926_127812881	3300031954	Soil	ERYMKQLKYIRQVSREFPNKIGEVSDASLSAEAKEQMKAALRQ
Ga0306920_1018387313	3300032261	Soil	KQLKYIRQVSREFPEKIGDVSDASLPAGAKERMKAALRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences