NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051515

Metagenome / Metatranscriptome Family F051515

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051515
Family Type Metagenome / Metatranscriptome
Number of Sequences 144
Average Sequence Length 52 residues
Representative Sequence MKSVGMVLLLAGLPTFAFAGGVIAPEISPASGVAALALVSGALLVIRGRRKK
Number of Associated Samples 90
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.01 %
% of genes near scaffold ends (potentially truncated) 22.92 %
% of genes from short scaffolds (< 2000 bps) 78.47 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (50.694 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.806 % of family members)
Environment Ontology (ENVO) Unclassified
(50.694 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.139 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MKSVGMVLLLAGLPTFAFAGGVIAPEISPASGVAALALVSGALLVIRGRRKKExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
50.7%49.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Iron-Sulfur Acid Spring
Sediment (Intertidal)
Soil
Vadose Zone Soil
Terrestrial Soil
Peatlands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Soil
Forest Soil
Tropical Peatland
Permafrost
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Fen
Weathered Mine Tailings
Host-Associated
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
4.2%9.7%4.9%11.8%4.9%4.9%9.0%2.8%2.8%9.0%4.9%2.8%3.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1002689623300000567Peatlands SoilMKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK*
JGI12269J14319_1037119413300001356Peatlands SoilMKFAGMVLVLAGFSSLAFAGGVAAPEIGPASGVGAVALLAGAILVIRGRRKK*
Ga0055486_1012649313300004071Natural And Restored WetlandsMKLSVVVLLLVGSSTLALAAGLALVPEISPASGAGALALFSGVLLVIRGRRKK*
Ga0062593_10217035523300004114SoilMKLGGMFVLLLGFSSFAIAGFQAVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0062593_10217035533300004114SoilMKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRG
Ga0058863_1072870223300004799Host-AssociatedMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0058862_1107398623300004803Host-AssociatedWLSEEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0070683_10000893843300005329Corn RhizosphereMKFIGMVLLLAGFSSLAFAGAAPPAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0070683_10000893863300005329Corn RhizosphereMKSIGMVLLLLGASSFAFASLAPAAPEISPASGVAALTLASGAILVIRGRRKH*
Ga0070683_10001103983300005329Corn RhizosphereMKSVGMAVLLLGLSSYAFAGLATVAPEISSASAVSAIALVSGAILVIRGRRKR*
Ga0070683_10001103993300005329Corn RhizosphereMKIAGMMLLMMGLSGLVLGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK*
Ga0070683_10004458663300005329Corn RhizosphereMKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0070670_10093385323300005331Switchgrass RhizosphereMKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0070670_10093385333300005331Switchgrass RhizosphereMKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMSALALVSGALLVIRGRRKN*
Ga0068869_10168896513300005334Miscanthus RhizosphereMKLGGMFVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0068868_10055655713300005338Miscanthus RhizosphereMKSIGMMLLLVGVSSFAVAGGVVAPEISTASGVAAFALLSGTLLVIRGRRR
Ga0070689_10016775433300005340Switchgrass RhizosphereMKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0070689_10016775443300005340Switchgrass RhizosphereMKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSG
Ga0070692_1137755023300005345Corn, Switchgrass And Miscanthus RhizosphereMKFTGMVLILMGLSSLAFAGVAAVPEIGPASGVGALALLAGGLLVIRGRRKRS*
Ga0070667_10212163613300005367Switchgrass RhizosphereVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0070713_10009555823300005436Corn, Switchgrass And Miscanthus RhizosphereMKFSGMVLLVMGLSSLAMGAVVAAPEISPASGVAALALVSGAVLVIRGRRKH*
Ga0070713_10009555833300005436Corn, Switchgrass And Miscanthus RhizosphereMKFIGIVLLLVSLSSLAFAGVGKPVPEIGPATGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070713_10009555843300005436Corn, Switchgrass And Miscanthus RhizosphereMKSIGIVLLILGFSTVAFAGGPTVPEISPASGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070713_10052204223300005436Corn, Switchgrass And Miscanthus RhizosphereMKTAGMILLLAGLSSFVMGGASAVPEISPATGVGALALLSGAVLVIRGRHKRQ*
Ga0070710_1077216113300005437Corn, Switchgrass And Miscanthus RhizosphereMKTIGMALLLMGLSSFAFAGGVATPEISPATGVAGLALVSGAVLVIRGRRKK*
Ga0070710_1077216123300005437Corn, Switchgrass And Miscanthus RhizosphereMKTFGIASLLVGLSSFAMGGTPTTPEISPATGVAALALVSGAVLVIRGRRKK*
Ga0070711_10045831913300005439Corn, Switchgrass And Miscanthus RhizosphereMKFAGMVLLMMGLSGLAMGAVVAAPEISPASGVAALALVSGAILVIRGRRKH*
Ga0070711_10045831923300005439Corn, Switchgrass And Miscanthus RhizosphereMKFIGIAVLLAGLANVALAGTFSVPEIGPATGVAAVALVSGALLVIRGRRKK*
Ga0070711_10061593713300005439Corn, Switchgrass And Miscanthus RhizosphereMKFLGFALLLTGFSSLAFAGLAPVVPEISPASGVAALTLVSGAILVIRGRRKH*
Ga0070707_10066810213300005468Corn, Switchgrass And Miscanthus RhizosphereAPTGNLQCRRSVMKSIGIVLLILGFSTVAFAGGPTVPEISPASGVAAVALVSGALLVIRGRRKKQSKEVR*
Ga0070684_10005926263300005535Corn RhizosphereMKFIGMVLLLAGFSSLAFAGAPPPAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0070693_10015247013300005547Corn, Switchgrass And Miscanthus RhizosphereMKIAGMMLLMMGLSGLVMGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK*
Ga0070693_10015247023300005547Corn, Switchgrass And Miscanthus RhizosphereMKSVGMVVLLLGLSSYAFAGLSTVAPEISSASAVSAIALVSGAILVIRGRRKR*
Ga0070664_10141642213300005564Corn RhizosphereGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0070664_10141642223300005564Corn RhizosphereMKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK*
Ga0068857_10074622223300005577Corn RhizosphereMKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMAALALVSGALLIVRGRRKK*
Ga0068854_10205341223300005578Corn RhizosphereMKLIGMMLLLLGAASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR*
Ga0068852_10240720233300005616Corn RhizosphereGMVLILAGFSSLAFAGVTPSAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0068852_10248066423300005616Corn RhizosphereMKSFGMILLLAGLSSLTMAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0068864_10111979823300005618Switchgrass RhizosphereMKLIGMMLLLAGFASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR*
Ga0068864_10132645813300005618Switchgrass RhizosphereMRFVGTMLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK*
Ga0068864_10132645843300005618Switchgrass RhizosphereVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK*
Ga0068851_1098742413300005834Corn RhizosphereMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0074470_1126764513300005836Sediment (Intertidal)MKFGGMVLLLVGLSSFAMGSNVVAPEISPASAVGALALVSGGLLVIRGRRKR*
Ga0068858_10003238943300005842Switchgrass RhizosphereMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ*
Ga0068858_10003238953300005842Switchgrass RhizosphereMKIIGIALLLVGVASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK*
Ga0070715_1017413423300006163Corn, Switchgrass And Miscanthus RhizosphereMKTAGMILLLAGLSSFVMGGASAVPEISPATGVGALALLSGAVLVIRGRRKRQ*
Ga0070715_1069606313300006163Corn, Switchgrass And Miscanthus RhizosphereMKTLGMVLLVLALPGFVFAAAVSAPEISPASGVAGLALVSGAVLVIRGRRKS*
Ga0097621_10008216233300006237Miscanthus RhizosphereMKTFGLALLFAGLSSLAFAGTLAVPEISPASGVAALTLVSGAILVIRGRRKR*
Ga0097621_10008216243300006237Miscanthus RhizosphereMKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIRSRRKQ*
Ga0068871_10085878223300006358Miscanthus RhizosphereMKSIGMVLLLAGLSGVAIAGTAGVPEISATSGAAALAVLSGAILVIRGRRKRN*
Ga0079222_1206530423300006755Agricultural SoilMKSLGMVLLLVGFSGFSMAGALVAAPEISPISGVTAIALISGAMLVVRGRRKK*
Ga0079222_1252081023300006755Agricultural SoilMKFFGMMLLLLGSSSLAFAGLVAAAPEISAASGVGALALLSGALLVIRGRRGR*
Ga0075425_10114580423300006854Populus RhizosphereMKSVGMVLLLVGLSTLAFAGSPTVPEISPASGVAALAMVSGAVLVIRGRRKR*
Ga0073928_1023777813300006893Iron-Sulfur Acid SpringMRKFLGLILLMAGASMMLDAGFLAVPEISPASGVAALAMLSGALLVIRGRRKK*
Ga0073928_1023777823300006893Iron-Sulfur Acid SpringMKSAGFVLLLIGLSSFATAGLATAAPEIGPASSGAAIALLSGALLVIRGRRKR*
Ga0105245_1015187433300009098Miscanthus RhizosphereMKMIGIVLLLVSVASLAFAGGVVVPEISPASGVAGLTLVSGALLVIRGRRKQ*
Ga0105245_1015187443300009098Miscanthus RhizosphereMKSFGMILILVGCSSLAFAGVAPSAPEIGPASGVAALTLVSGAILVIRGRRKK*
Ga0105245_1315627713300009098Miscanthus RhizosphereMKLGGMFVLLLGFSSFAIAGFQAVPEISPASGVAAFALVSGALLVIRSRRRK*
Ga0105243_1080713613300009148Miscanthus RhizosphereMKSIGMMLLFAGLSSLAMAGVFVSAPEISPASGVAALALVSGAILVIRGRSRR*
Ga0105241_1107599723300009174Corn RhizosphereMKFVGGVLLLAGLTTVAFAGGAAAPEVSPASGVAALALVSGAILVIRGRHRK*
Ga0105241_1145615223300009174Corn RhizosphereMKLAGMLLLMMGLSGLVMGAAVATPEISAATGLSALTLLAGAVLVIRGRRQR*
Ga0105242_1329217813300009176Miscanthus RhizosphereMILLLAGLSSLTMAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0105248_1013234443300009177Switchgrass RhizosphereMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALALVSGAILVIRGRRKK*
Ga0105248_1013234453300009177Switchgrass RhizosphereMKIIGIALLMVGAASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK*
Ga0105248_1257286733300009177Switchgrass RhizospherePFGGLAFMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ*
Ga0105249_1004804673300009553Switchgrass RhizosphereMKSIGLVLLLLGASSFAFAGLNVVAPEISPSSGVAALTLVSGAILVIRGRRKR*
Ga0116217_1082381613300009700Peatlands SoilMKFVGITLLFAGLSSVVLADVTTAPEVSPASGVAALALVSGAVLVIRGRRKSS
Ga0116217_1082381623300009700Peatlands SoilMKSVGLVMLLVGLSTLAFAGEPTAPEISPASGVAAIALVSGAVLVIRSRRKK*
Ga0116223_1052279823300009839Peatlands SoilMKFGIVLVLTSFSSLAFAGTGTAPEIGPESGVGAVALLAGAILVIRSRRKR*
Ga0134125_1160518523300010371Terrestrial SoilEEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0136449_1000000531043300010379Peatlands SoilMVGMKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK*
Ga0136449_10089397913300010379Peatlands SoilMKSIGIAFLLVGFSAFAFAGSARAPEISPASGVAALAMISGALLVIRGRRKK*
Ga0136449_10089397923300010379Peatlands SoilMKFAGIALLLMGLASIAFAGIHTVPEIGPVSGVAALALVSGALLVIRGRRKK*
Ga0134124_1108421623300010397Terrestrial SoilMKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIRG
Ga0134127_1303200223300010399Terrestrial SoilDTFAAGDTWLSEEFLMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR*
Ga0134127_1321014613300010399Terrestrial SoilMILLAVGVSNLAVAGATTAPEISPASGVAALALVSGAVLVIRARRRK*
Ga0134123_1066257743300010403Terrestrial SoilMLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK*
Ga0134123_1066257753300010403Terrestrial SoilIREVWFLMKSIGMMLLLVGVSSFAVAGGVVAPEISTASGVAAFALLSGTLLVIRGRRRK*
Ga0105246_1012898223300011119Miscanthus RhizosphereMKSFGMILLLAGLSSFTIAGTLTVPEVSPASGLAALAMVSGVLLVIRGRRKK*
Ga0105246_1071809423300011119Miscanthus RhizosphereMKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRG
Ga0105246_1149012213300011119Miscanthus RhizosphereLVLFGGLSGLVLASGPAVPEISPASGMAALALVSGALLIVRGRRKN*
Ga0105246_1149012223300011119Miscanthus RhizosphereMKSIGMMLLLVGLSSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK*
Ga0137388_1091986713300012189Vadose Zone SoilLGTMLLLVGLCQFASGGAVAAPEINPESGVAAFALLSGALLVIRGRRKS*
Ga0168317_100092753300012982Weathered Mine TailingsMKILGMFLLLASVSSLAMAGTNPIPEISPASGAAAIALVSGALLVIRGRRKR*
Ga0163162_1340812833300013306Switchgrass RhizosphereMKTFGLALLFAGLSSLAFAGTLAVPEISPASGVAALTLVSGAILVIRGRRK
Ga0157372_1001803273300013307Corn RhizosphereMKFIGMVLLLAGFSSLAFAGAAPPAPEIGPASGVAALTLVSGAILVIRGRRKNRTGI*
Ga0157375_1342689113300013308Miscanthus RhizosphereMKTFGFALLFAGLSSLAFAGTPTVPEISPASGVAALTLVSGAILVIRGRRK
Ga0157375_1377530533300013308Miscanthus RhizosphereMKLGGMIVLLLGFSSFAIAGFQAVPEISPASGVAAFAIVSGALLVIRGRRKK*
Ga0163163_1117799233300014325Switchgrass RhizosphereMKSIGLVLLLLGASSFAFAGLNVVAPEISPTSGVAALTLVSGAILVIRGRRKR*
Ga0182024_1059011423300014501PermafrostMKFAGMVLLVMGLSGLAMGAALAAPEISPATGLGALALLSGAILVIRGRRKH*
Ga0182024_1059011433300014501PermafrostMKSVGIVFLLVGFSTFAFAGFTSAPEISPASGVAALALVSGAILVIRGRRKK*
Ga0157377_1056089813300014745Miscanthus RhizosphereMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLISGAILVIRGRRKQ*
Ga0157379_1016113933300014968Switchgrass RhizosphereMKSVGMVLLLAGLPTFAFAGGVIAPEISPASGVAALALVSGALLVIRGRRKK*
Ga0157376_1055633613300014969Miscanthus RhizosphereMKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAILVIR
Ga0132258_1346548433300015371Arabidopsis RhizosphereMTKILGVTLVLIGVAQFAIAGGATPAPEISPGSAAAALALLSGAILVIRGRRRK*
Ga0187779_1074299633300017959Tropical PeatlandMKFVGMALLLAGFSGLALAGGVAAPEIGPASGVGAVALLAGGILVIRGRRKQ
Ga0206356_1081667233300020070Corn, Switchgrass And Miscanthus RhizosphereMKIAGVLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0206352_1000122213300020078Corn, Switchgrass And Miscanthus RhizosphereMKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0206353_1008300923300020082Corn, Switchgrass And Miscanthus RhizosphereWLSEEFLMKIAGMLVLLLGVSSFAFAGTPAVPEISAASGVAAITLVSGALLVIRGRRKR
Ga0210402_1165361023300021478SoilMKSFGMMLLLVGFASLAMAGASPTPEISPATGVAGLAMVSGAVLVIRGRRKKS
Ga0242657_118642423300022722SoilALLVIGCSGFVFAGGVAVPEVSPATGVGALALVSGAVLVIRGRRKK
Ga0207642_1073982123300025899Miscanthus RhizosphereMKLGGMIVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK
Ga0207695_1113133133300025913Corn RhizosphereTGGFNSMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKK
Ga0207671_1006364643300025914Corn RhizosphereMKFIGMVLLLAGFSSLAFAGAPPPAPEIGPASGVAALTLVSGAILVIRGRRKK
Ga0207671_1120182223300025914Corn RhizosphereMKIIGIALLLVGVASLAFAGTPVAPEISPASGVAALTLVSGAILVIRGRRKK
Ga0207671_1120182233300025914Corn RhizosphereMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRKQ
Ga0207663_1151705413300025916Corn, Switchgrass And Miscanthus RhizosphereMKMIGIVLLLVSVASLAFAGGVVVPEISPASGVAGLTLVSGALLVIRGRRKQ
Ga0207646_1124265723300025922Corn, Switchgrass And Miscanthus RhizosphereMKFSGMVLLVMGLSSLAMGAVVAAPEISPASGVAALALVSGAVLVIRGRRKH
Ga0207681_1172603513300025923Switchgrass RhizosphereMKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMSALALVSGALLVIRGRRKN
Ga0207694_10005153153300025924Corn RhizosphereMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0207687_1170067513300025927Miscanthus RhizosphereMKIAGMMLLMMGLSGLVLGAVTTAPEISTASGLSALALLSGAILVIRGRRKNK
Ga0207686_1050072213300025934Miscanthus RhizosphereMKSIGMMLLFAGLSSLAMAGVFVSAPEISPASGVAALALVSGAILVIRGRSRR
Ga0207686_1058476123300025934Miscanthus RhizosphereMKFVGGVLLLAGLTTVAFAGGAAAPEVSPASGVAALALVSGAILVIRGRHRK
Ga0207686_1064245023300025934Miscanthus RhizosphereMKFIGMALLLVSVASLAFAGATVAPEISPASGVAALTLVSGAILVIRGRRQK
Ga0207689_1142532333300025942Miscanthus RhizosphereMKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRK
Ga0207661_1001818743300025944Corn RhizosphereMKSVGMAVLLLGLSSYAFAGLATVAPEISSASAVSAIALVSGAILVIRGRRKR
Ga0207679_1197856723300025945Corn RhizosphereMKSIGMMLLLVGISSFAVAGGVVAPEISPASGTAALALVSGGLLVARGRRKR
Ga0207658_1197582413300025986Switchgrass RhizosphereAAGARNRTGGFNSMKSIGLVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0207703_1157385023300026035Switchgrass RhizosphereMKFFGMALLLVAAASSAFAGGVTVPEISPASGVAALTLVSGAIL
Ga0207702_1128239733300026078Corn RhizosphereMKSIGMVLLLLGASSFAFASLAPAAPEISPASGVAALTLASGAILVIRG
Ga0207641_1213196733300026088Switchgrass RhizosphereMKFIGMLVLFGGLSGLVLAGGPAVPEISPASGMAALALVSGALLIVRGRRKK
Ga0207676_1066129333300026095Switchgrass RhizosphereMLLLVGVSTLAMAGSPNVPEVSPASGLAALAMVSGALLVIRGRRKK
Ga0207676_1066129363300026095Switchgrass RhizosphereVLLLGFSSFAIAGFQGVPEISPASGVAAFALVSGALLVIRGRRKK
Ga0207676_1067760033300026095Switchgrass RhizosphereMKSIGMMLLLVGISSFAVAGGVVAPEISPATGVSAFALLSGALLVIRGRRRK
Ga0207676_1106123623300026095Switchgrass RhizosphereGVRNNEGVWIDMKLIGMMLLLAGFASCAFAAVPEISPASGTAALALVSGGLLVARGRRKR
Ga0207676_1183929913300026095Switchgrass RhizosphereMKFVGTMLFFVGLSSLAMAGSTNVPEVSPASGAAALALISGALLVIRGRRRK
Ga0207674_1082867623300026116Corn RhizosphereMKLVGMLVLFGGLSGLVVAGGPAVPEISPASGMAALALVSGALLIVRGRRKK
Ga0209517_1000540743300027854Peatlands SoilMKFVGMVLFFVGLSSVAMAGGSAAPEISPASGVAALALVSGALLVIRGRRKK
Ga0209517_1002333543300027854Peatlands SoilMKFGIVLVLTSFSSLAFAGTGTAPEIGPESGVGAVALLAGAILVIRSRRKR
Ga0209415_10017205123300027905Peatlands SoilMKSVGLVMLLVGLSTLAFAGEPTAPEISPASGVAAIALVSGAVLVIRSRRKK
Ga0268264_1175679513300028381Switchgrass RhizosphereMKLGGMIVLLLGFSSFAIAGFQGFPEISPASGVAAFALVSGALLVIRGRRKK
Ga0170834_10269813413300031057Forest SoilMKTVGMILLLIGCSGFVFAGAPSTPEISPATGVAALAMVSGSVLVIRGRRKK
Ga0170834_10269813423300031057Forest SoilMKTFGMALLLIGCSGFCFAAAVAAPEISPASGVTAIALVSGAVLVIRGRRKK
Ga0170834_10363907313300031057Forest SoilMKPIGMVLILVGISTFAFAGGPTVPEVGPASGVAALALVSGALLVIRGRRKK
Ga0170824_10142779823300031231Forest SoilMKSFGMLLLLAGFASLAMAGPPAAPEISPATGVAGLALVSGAVLVIRGRRKKS
Ga0170824_10142779833300031231Forest SoilMKSVGMLLLLVGFASLAMAGVGSAPEISPATGVAGLALVSGAVLVIRGRRKKS
Ga0170824_11234552133300031231Forest SoilMKTVGMILLLIGCSGFVFAGAPATPEISPATGVAALALVSGAVLVIRGRRKK
Ga0170824_12171928513300031231Forest SoilMKSIGMVLLLLGASSFAFAGLNVVAPEISPASGVAALTLVSGAILVIRGRRKR
Ga0302322_10107718023300031902FenMKSLGLVLLLVGLSTFALAGGGIAPEISPASGVSALALVSGALLVMRGRRKK
Ga0311301_10005192243300032160Peatlands SoilMKFAGMVLVLAGFSSLAFAGGVAAPEIGPASGVGAVALLAGAILVIRGRRKK
Ga0311301_1084232013300032160Peatlands SoilMKSIGIAFLLVGFSAFAFAGSARAPEISPASGVAALAMISGALLVIRGRRKK
Ga0311301_1084232023300032160Peatlands SoilMKFAGIALLLMGLASIAFAGIHTVPEIGPVSGVAALALVSGALLVIRGRRKK
Ga0310810_1108779923300033412SoilMKFLGIMLLLAGVSSFAMAGAAAAPEISPASGVGALALLSGGLLVIRGRSRK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.