Metagenome / Metatranscriptome Family F051625

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051625
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	49 residues
Representative Sequence	AQNLTDVIQYGSEADDFEFEEVGSTIDVSPANTTTCDQQVNQAASASG
Number of Associated Samples	64
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.37 %
% of genes near scaffold ends (potentially truncated)	57.34 %
% of genes from short scaffolds (< 2000 bps)	56.64 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.937 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (33.566 % of family members)
Environment Ontology (ENVO)	Unclassified (33.566 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00746	Gram_pos_anchor	5.59
PF02771	Acyl-CoA_dh_N	4.20
PF02511	Thy1	2.80
PF02515	CoA_transf_3	2.80
PF13408	Zn_ribbon_recom	0.70
PF00883	Peptidase_M17	0.70
PF02237	BPL_C	0.70
PF05532	CsbD	0.70
PF00994	MoCF_biosynth	0.70
PF08734	GYD	0.70
PF02423	OCD_Mu_crystall	0.70
PF07784	DUF1622	0.70
PF00127	Copper-bind	0.70
PF07366	SnoaL	0.70
PF13342	Toprim_Crpt	0.70
PF00440	TetR_N	0.70
PF13473	Cupredoxin_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.20
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	2.80
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.80
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.70
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.70
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.70
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.70
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.70
COG4828	Uncharacterized membrane protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
All Organisms	root	All Organisms	37.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
cellular organisms	root	All Organisms → cellular organisms	36.36 %
Viruses	superkingdom	All Organisms → Viruses	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.07 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	25.87 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	0.70 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	25.87 %
unclassified Bdellovibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales	0.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.70 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	25.87 %
Bdellovibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	22.38 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	2.80 %
Bdellovibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.94 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	22.38 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	2.10 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	0.70 %
Bdellovibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	0.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.70 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009789\|Ga0126307_10501206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	980	Open in IMG/M
3300009789\|Ga0126307_10741313	Not Available	793	Open in IMG/M
3300009789\|Ga0126307_10977165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	684	Open in IMG/M
3300009789\|Ga0126307_11282197	Not Available	593	Open in IMG/M
3300009789\|Ga0126307_11623205	Not Available	525	Open in IMG/M
3300009789\|Ga0126307_11735330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	508	Open in IMG/M
3300009840\|Ga0126313_10100649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2124	Open in IMG/M
3300009840\|Ga0126313_11504981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	559	Open in IMG/M
3300010036\|Ga0126305_11139356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	538	Open in IMG/M
3300010037\|Ga0126304_11057114	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300010038\|Ga0126315_10077103	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300010038\|Ga0126315_10539579	Not Available	747	Open in IMG/M
3300010039\|Ga0126309_10037041	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300010039\|Ga0126309_10183343	Not Available	1148	Open in IMG/M
3300010039\|Ga0126309_10572746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	706	Open in IMG/M
3300010039\|Ga0126309_10863978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	596	Open in IMG/M
3300010040\|Ga0126308_10719842	Not Available	687	Open in IMG/M
3300010041\|Ga0126312_10797231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	685	Open in IMG/M
3300010041\|Ga0126312_11302163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	537	Open in IMG/M
3300010042\|Ga0126314_11214157	Not Available	564	Open in IMG/M
3300010042\|Ga0126314_11533633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	500	Open in IMG/M
3300010044\|Ga0126310_10305146	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300010044\|Ga0126310_10633850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300010044\|Ga0126310_10874527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	698	Open in IMG/M
3300010044\|Ga0126310_11155480	Not Available	619	Open in IMG/M
3300010044\|Ga0126310_11265672	Not Available	595	Open in IMG/M
3300010044\|Ga0126310_11817500	Not Available	508	Open in IMG/M
3300010045\|Ga0126311_11339612	Not Available	596	Open in IMG/M
3300010045\|Ga0126311_11721647	Not Available	530	Open in IMG/M
3300010137\|Ga0126323_1182021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	644	Open in IMG/M
3300010166\|Ga0126306_10170041	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300010166\|Ga0126306_10509194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300010166\|Ga0126306_11856323	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300012212\|Ga0150985_113465338	Not Available	522	Open in IMG/M
3300012678\|Ga0136615_10221840	Not Available	857	Open in IMG/M
3300012679\|Ga0136616_10296036	Not Available	738	Open in IMG/M
3300014487\|Ga0182000_10261246	Not Available	700	Open in IMG/M
3300014487\|Ga0182000_10350941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	635	Open in IMG/M
3300014488\|Ga0182001_10434389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	583	Open in IMG/M
3300018465\|Ga0190269_10496200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	791	Open in IMG/M
3300018465\|Ga0190269_11765345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	526	Open in IMG/M
3300018466\|Ga0190268_12152643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	519	Open in IMG/M
3300018918\|Ga0193616_1129101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	699	Open in IMG/M
3300018918\|Ga0193616_1214005	Not Available	505	Open in IMG/M
3300018933\|Ga0193614_1014540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2304	Open in IMG/M
3300018933\|Ga0193614_1014912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2270	Open in IMG/M
3300018939\|Ga0193593_1033008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300019135\|Ga0193602_1109292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300019377\|Ga0190264_12297896	Not Available	506	Open in IMG/M
3300019767\|Ga0190267_10007901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	2782	Open in IMG/M
3300019767\|Ga0190267_11441781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	526	Open in IMG/M
3300020181\|Ga0196958_10128102	Not Available	862	Open in IMG/M
3300021184\|Ga0196959_10024958	Not Available	1125	Open in IMG/M
3300027761\|Ga0209462_10122657	Not Available	610	Open in IMG/M
3300030496\|Ga0268240_10064980	Not Available	807	Open in IMG/M
3300030496\|Ga0268240_10154645	Not Available	567	Open in IMG/M
3300030510\|Ga0268243_1142398	Not Available	577	Open in IMG/M
3300030510\|Ga0268243_1154577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	557	Open in IMG/M
3300030510\|Ga0268243_1154951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	556	Open in IMG/M
3300030510\|Ga0268243_1197037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	501	Open in IMG/M
3300030513\|Ga0268242_1138290	Not Available	531	Open in IMG/M
3300030513\|Ga0268242_1141285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	526	Open in IMG/M
3300030515\|Ga0268254_10162319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	726	Open in IMG/M
3300032159\|Ga0268251_10006605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	3125	Open in IMG/M
3300032159\|Ga0268251_10046420	Not Available	1409	Open in IMG/M
3300033989\|Ga0334924_000828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	2553	Open in IMG/M
3300034000\|Ga0334918_041811	Not Available	645	Open in IMG/M
3300034005\|Ga0334930_062918	Not Available	639	Open in IMG/M
3300034007\|Ga0334936_005454	All Organisms → cellular organisms → Bacteria	3198	Open in IMG/M
3300034007\|Ga0334936_063624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	762	Open in IMG/M
3300034007\|Ga0334936_079261	Not Available	681	Open in IMG/M
3300034009\|Ga0334944_035169	Not Available	957	Open in IMG/M
3300034009\|Ga0334944_054722	Not Available	758	Open in IMG/M
3300034026\|Ga0334946_055080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	666	Open in IMG/M
3300034131\|Ga0334911_019008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	944	Open in IMG/M
3300034131\|Ga0334911_037228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	691	Open in IMG/M
3300034131\|Ga0334911_045603	Not Available	629	Open in IMG/M
3300034132\|Ga0334915_011073	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300034132\|Ga0334915_050054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	843	Open in IMG/M
3300034132\|Ga0334915_095257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	618	Open in IMG/M
3300034133\|Ga0334916_009339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1083	Open in IMG/M
3300034136\|Ga0334933_061859	Not Available	576	Open in IMG/M
3300034172\|Ga0334913_087443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	658	Open in IMG/M
3300034221\|Ga0334937_208478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	540	Open in IMG/M
3300034376\|Ga0334923_116662	Not Available	552	Open in IMG/M
3300034377\|Ga0334931_039864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1029	Open in IMG/M
3300034377\|Ga0334931_114207	Not Available	637	Open in IMG/M
3300034377\|Ga0334931_156016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300034687\|Ga0334905_074216	Not Available	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.50%
Host-Associated	Host-Associated	3.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	4.20%
Plants	Host-Associated → Plants	3.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Phylloplane	Host-Associated → Plants → Phylloplane	2.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.34%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	14.69%
Sand	Environmental → Terrestrial → Soil → Sand	11.89%
Ice	Environmental → Aquatic → Freshwater → Ice	3.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.10%
Loam	Environmental → Terrestrial → Soil → Loam	1.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.55%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	14.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	11.89%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	9.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.10%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	33.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.49%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	9.09%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	9.09%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	9.09%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	5.59%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.50%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.80%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.10%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.40%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019124	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034000	Biocrust microbial communities from Mojave Desert, California, United States - 14HMC	Environmental	Open in IMG/M
3300034001	Biocrust microbial communities from Mojave Desert, California, United States - 15HMC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034136	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 29HNS	Environmental	Open in IMG/M
3300034137	Biocrust microbial communities from Mojave Desert, California, United States - 39SMC	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_09087120	2119805009	Soil	QIGSEADDFEFDEVGSSIVVSPTNTTSSNQEVNQAASASD
Ga0126307_105012061	3300009789	Serpentine Soil	QGVGNTGNAQNVTDILQYGSTADEFEFEEVGSTITISPTNTATCDQQVNQAAAASGSG*
Ga0126307_107413131	3300009789	Serpentine Soil	AQNVTNILQYGSTADEFEFEEVGSTITVSPTNTTTCTDQVNQAASASG*
Ga0126307_109771652	3300009789	Serpentine Soil	GNAQNVTDILQYGSTADEFEFEEVGSTIDVSPTNSTECTDQVNQAASATG*
Ga0126307_110983091	3300009789	Serpentine Soil	GSTADEFEFEEVGSSIDVSPANSTECTSEVNQAASASG*
Ga0126307_112821971	3300009789	Serpentine Soil	GVGNTGNPQNITDILQYASTADEFEFEEVGSDITVSGTNPTTCTDQVNQAASAAA*
Ga0126307_116232051	3300009789	Serpentine Soil	VGNTGNTQSLTDILQYGSTADEFEFEEVGSDITLSPSNPVTCDQQVNQAASASG*
Ga0126307_117353302	3300009789	Serpentine Soil	VGNTGNAQNLTDVLQYGSTADEFEFEEVGSTITVSPESSTTCDQQVNQAAAASG*
Ga0126313_101006493	3300009840	Serpentine Soil	VGLQGDAQTGNAQNLTALTQGNGVADEFELEEVGSDITGSPSNTTTCTDQVNQAAAAS*
Ga0126313_103527531	3300009840	Serpentine Soil	VTDLLQAASEAGDFEFEEVGSDITVSPESPTTCDEQVNQAASASG*
Ga0126313_104535681	3300009840	Serpentine Soil	GSTADEFEFEEVGSTIDVSPTNSTECTDQVNQAASATG*
Ga0126313_109126841	3300009840	Serpentine Soil	LTDILQYGSTADEFEFEEVGSTITVSPANTTTCDEQVNQAAAASG*
Ga0126313_115049812	3300009840	Serpentine Soil	GNAQNTIDLIQYSGEVDDFEFEEVGSDITVSPVNTTSCEDQVNQAASAAG*
Ga0126313_118069721	3300009840	Serpentine Soil	NVTDLLQAESEADEFEFEEVGSTIDVSPTSTTTCDQKVNQAASASG*
Ga0126305_108078382	3300010036	Serpentine Soil	IQYASEADDLEFEEVGSTIDVGGTNTATCDQQVNQAASASG*
Ga0126305_111393562	3300010036	Serpentine Soil	VGNTGNAQNVTDILQYGSTADEFEFEEVGSTITISPTNTATCDQQVNQAAAASGSG*
Ga0126304_100736851	3300010037	Serpentine Soil	QSLTDILQYGSTADEFEFEEVGSDIAVSPTSTTTCDEQVNQAASASG*
Ga0126304_102967282	3300010037	Serpentine Soil	VTDILQYGSTADEFEFEEVGSTITVSPTNETTCDQQVNQAATAAG*
Ga0126304_110571141	3300010037	Serpentine Soil	QGVGNTGNAQNVTDILQYGSTADEFEFEEVGSTITVSPTSSTTCDEQVNQAASASG*
Ga0126315_100771033	3300010038	Serpentine Soil	VGNTGNAQNLTDVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAASASG*
Ga0126315_105257541	3300010038	Serpentine Soil	DVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAAAASG*
Ga0126315_105395791	3300010038	Serpentine Soil	NSCCSLEGLGNVTDLLQAASEAGDFEFEEVGSDITVSPESPTTCDEQVNQAASASG*
Ga0126309_100370411	3300010039	Serpentine Soil	NTGNAQNQTNILQYASTVDDFEFEEVGGTITVSPTNTTSCEQQVNQAAAASSVDP*
Ga0126309_101833431	3300010039	Serpentine Soil	IQGVGQTGNAQNQIDLIQYGSVADDFEFDEVGSTITSSPVNTTTCDQQVNQAATAAG*
Ga0126309_105727461	3300010039	Serpentine Soil	VGNTGNAQNVTDILQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAASATG*
Ga0126309_108639781	3300010039	Serpentine Soil	GIQGTANTGNAQNQIDLIQYGSEADDFEFDEVGADLSVSPVNTTSCDQQVNQAASASS*
Ga0126308_107198422	3300010040	Serpentine Soil	QGIGNTGNAQNITDILQYGSTADEFEFEEVGSDITVSGTNPVTCDQQVNQAASAAA*
Ga0126312_107972312	3300010041	Serpentine Soil	GNAQNLTDILQYGSTADEFEFEEVGSTITVSPTSSTTCDEQVNQAATAAG*
Ga0126312_109100601	3300010041	Serpentine Soil	TIDLIQYSGEVDDFEFEEVGSTIDVSPTNTATCDSQVNQAASASG*
Ga0126312_113021632	3300010041	Serpentine Soil	VGNTGNAQNVTDILQYGSTADEFEFEEVGSTITVSPTNTTTCDQQVNQAASASGSG*
Ga0126314_112141572	3300010042	Serpentine Soil	GEAQNVLDLIEDASETDEFEFEEVGSDIAVSPESPTTCDQHVNQAASASG*
Ga0126314_115336331	3300010042	Serpentine Soil	NTGNAQNLTDVLQYGSTADDFEFEEVGSTITVSPTNSTECTSAVNQAASASGK*
Ga0126310_103051463	3300010044	Serpentine Soil	NQCANVQGSAQTGNSQNQIDLVQYVSEAADSEIEKVGSTIEESPANTATCDQQVNQAASAAA*
Ga0126310_105518442	3300010044	Serpentine Soil	AQNLTDVLQYGSTADEFEFEEVGSSIDVSPANSTECTSEVNQAASASG*
Ga0126310_106338501	3300010044	Serpentine Soil	QNVLDLIEDASETDEFEFEEVGSDIAVSPESTTTCDQQVNQAASASG*
Ga0126310_108745272	3300010044	Serpentine Soil	VGNTGNAQNLTDVLQYGSTADEFEFEEVGSTITVSPENSTTCDQQVNQAATAAG*
Ga0126310_111554801	3300010044	Serpentine Soil	GVGNTGNAQTLTDVLQYGSTADDFEFDEVNSSIDVSPTNSTECTSEVNQAASASG*
Ga0126310_112656721	3300010044	Serpentine Soil	QVVGNTGNAQNVTDVLQYGSTADEFEFEEVGSTITVSPTSSTTCTDQVNQAASASG*
Ga0126310_114761992	3300010044	Serpentine Soil	NVIDIIQYASEADDFEFEEVGSDINVSPSNTTTCTDEVNQAASASG*
Ga0126310_114934122	3300010044	Serpentine Soil	YVSTADDFEFDEVDSTIDTSPTNTATCDQQVNQAASASSS*
Ga0126310_115319511	3300010044	Serpentine Soil	IQYGSEADDFEFDDTGASIDVSPTNTTSCDQQVNQAASASG*
Ga0126310_118175002	3300010044	Serpentine Soil	IGNTGNAQNITDIFQYGSTADEFELEEVGSDITVSGTNPVTCDQQVNQAASAAA*
Ga0126311_113396121	3300010045	Serpentine Soil	GNAQNLTDVLQYGSTADEFEFEEVGSSIDVSPTNSTECTSEVNQAASASG*
Ga0126311_116954491	3300010045	Serpentine Soil	DVLQYGSTADEFEFEEVGSSIDVSPANSTECTSEVNQAASASG*
Ga0126311_117216472	3300010045	Serpentine Soil	GEAQNVLDLIEDASETDEFEFEEVGSDIAVSPESPTTCDQQVNQAASASG*
Ga0126323_11820212	3300010137	Soil	VGNTGNAQNVTDILQYGSTADEFEFEEVGSTITVSPTNTATCDQQVNQAASASG*
Ga0126306_101291663	3300010166	Serpentine Soil	QYASEADDFEFEEVGSTIDVGGTNTATCDQQVNQAASASG*
Ga0126306_101700412	3300010166	Serpentine Soil	AANTGNAQNVIDVIQYASEADEFEFDEVSTTIEVNPTSTTVCTQEVNQAASASGS*
Ga0126306_105091941	3300010166	Serpentine Soil	TANTGNSQNTIDLTQFDSEADDFEFDEVSSDVTVSGTSETTCDQQVNQAASAFGG*
Ga0126306_118563231	3300010166	Serpentine Soil	NITDILQYGSTADEFEFEEVGSTITVSPTSSTTCDEQVNQAASASG*
Ga0136610_11341301	3300012184	Polar Desert Sand	LIQYASTADDFEFEEVGSDISVSPENSATCEQAVQQAASASG*
Ga0136622_101498591	3300012187	Polar Desert Sand	QNQIDLIQYASTADDFEFDEVGSDISVSPVNTTECTGTVQQAASAAG*
Ga0150985_1134653381	3300012212	Avena Fatua Rhizosphere	NTGNAQNQIDLIQYGSTADDFEFDETGSTIDVNPVNTTDCTQAVNQAASASG*
Ga0136615_102218402	3300012678	Polar Desert Sand	STADDFEFDEVGSDISVSPVNTTECTGTVQQAASAAG*
Ga0136616_102960362	3300012679	Polar Desert Sand	DLIQYASTADDFEFDEVGSDISVSPANTTTCDQSVEQAAAASG*
Ga0136616_105290481	3300012679	Polar Desert Sand	IQYGSEADDFEFDEGGSSIEVSPANTTECTQEVNQAASASGSK*
Ga0182000_101590352	3300014487	Soil	QYGSTADDFEFEEVGSTIDVSPANTTTCDQQVNQAASASG*
Ga0182000_101948851	3300014487	Soil	LTDVLQYGSTADEFEFEEVGSSIDVSPSNSTSCDQQVNQAATASG*
Ga0182000_102612462	3300014487	Soil	NTGNAQNVTDILQYGSTADEFEFEEVGGTLTVSPTNTTTCTDQVNQAASASG*
Ga0182000_103509411	3300014487	Soil	GEAQTGNSQNQLDLLPYVSEADDFEFDEVGSTIDSSPTNTASCDQQVNQAASASSS*
Ga0182001_104343891	3300014488	Soil	VAQTGNSQNQLDLVQDFSIADDFEFEEVGSSIDVSPTSTTTCDQQVNQAASASG*
Ga0190265_108652681	3300018422	Soil	YASTADDFEFDEVGSNVDVSPSSTTTCDQQVNQAASASG
Ga0190275_107356052	3300018432	Soil	STADDFEFDEVGSNIDVSPSNSTECNQQVNQAASASG
Ga0190269_101965961	3300018465	Soil	VTDVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAAAASG
Ga0190269_104962002	3300018465	Soil	VGNTGNAQNVTDVLQYGSTADEFEFEEVGSTITVSPTNTATCDQQVNQAASASG
Ga0190269_117653452	3300018465	Soil	GNAQNQIDVIQYGAEEGGDFEFEEVGSTIDVSPTNSTECTGEVNQAATAAA
Ga0190268_101137091	3300018466	Soil	EADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASGS
Ga0190268_107112771	3300018466	Soil	GSTADDFEFEEVGSSIDVSPTNTTTCDQQVNQAASASG
Ga0190268_114578832	3300018466	Soil	VQYGSEADDFADEDAGSSINVSPSNSTTCDQQVNQAASASG
Ga0190268_121526431	3300018466	Soil	IQGVANTGNAQNQLDLIQYGSEADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASG
Ga0193598_11363661	3300018910	Soil	LDLIQYGSEADDFEFDEVGSSVEVSPSSTTECDQQVNQAASASG
Ga0193616_11291011	3300018918	Soil	CAGIQGVANTGNAQNQIDLVEFFSLADDFEFDEVGSDVDISSENSTECDQQVNQAASASG
Ga0193616_11682362	3300018918	Soil	IDVIQYGSEAGDFEFEEVGSTIDVSPTNSTECTGEVNQAATAAA
Ga0193616_12140051	3300018918	Soil	VTYIGNPQNVTDVLQVASEADDFDFEEVGSDITVSPESPTTCDQRVNQAASTSG
Ga0190273_102988862	3300018920	Soil	STADEFEFEEVGSTIDVSPTSTTTCDQQVNQAATASG
Ga0193614_10145404	3300018933	Soil	GVTYIGNPQNVTDVLQVASEADDFDFEEVGSDITVSPESPTTCDQRVNQAASTSG
Ga0193614_10149125	3300018933	Soil	VAQTGNSQNLIDLVPVFSVADDYEFDEVGSTIDESPANTATCEQQVNQAASASG
Ga0193614_11676872	3300018933	Soil	YGSDADDFEFDEVGSNVDVSPSNSTTCDQQVNQAASASG
Ga0193593_10330081	3300018939	Soil	VAQTGNSQNLIDLVPAFSVADDYEFDEVGSTIDESPTNTATCDQQVNQAASASA
Ga0193593_10688031	3300018939	Soil	SEADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASGS
Ga0193605_12235531	3300018984	Soil	LDLIQYGSEADDFEFDEVGSSVEVSPSSTTECDQQVNQAASAFGS
Ga0193592_10926792	3300019124	Soil	QLDLIQYGSEADDFEFEEVGSTITTSPVNTTTCDQQVNQAASAFGK
Ga0193602_11092921	3300019135	Soil	IQGVAQTGNSQNQLDLVPVFSEADDFEFDEVGSSIDESPTNTATCDQQVNQAASASGGN
Ga0190264_110839412	3300019377	Soil	IQYGSEADDLEFEGVGFTIDVSPSSSTSRDQQVNQAASASC
Ga0190264_118546341	3300019377	Soil	ADDFEFDEVGSNVDVSPVNTTTCDQSVEQAAAASS
Ga0190264_122978962	3300019377	Soil	GNTGNSQNVIDLIQYASTADDFEFEEVGSDIAVSPTNTTTCDQKVQQAASASG
Ga0190267_100079015	3300019767	Soil	NAQNVTDVLQYGSTADEFEFEEVGSTITVSPANSTECTDQVNQAASASG
Ga0190267_114417812	3300019767	Soil	ANTGNAQNVLPIIQYASEADDFEFEEVGSTIDVGGTNTATCDQQVNQAASASG
Ga0196958_101281021	3300020181	Soil	YGSTADDFEFDEVGSTITTSPVNTTTCDQQVNQAASAAA
Ga0196959_100249581	3300021184	Soil	ANTGNAQNQLDLIQYGSEADDFEFDEVGSSVEVSPANTTECDQQVNQAASASG
Ga0196959_100962332	3300021184	Soil	VTDVIQYGSTADDFEFEEIGSTIDVSPANTTTCDQQVNQAASASG
Ga0196962_100708361	3300024430	Soil	AQNQIDLIQYGSDADDFEFDEVGSTITTSPVNTATCDQQVNQAASASG
Ga0209642_107661861	3300025167	Soil	DLIQYASTADDFEFEEVGSSIDVSPSNTTSCDQQVNQAASATG
Ga0209642_107688782	3300025167	Soil	SQNVIDLIQYGSTADDFEFEEVGSSIDVSPSNSTSCDQQVNQAASASG
Ga0209462_101226571	3300027761	Agave	TGNTQNLTDVLQYGSTADDFEFEEVGSSIDVSPENSTTCDQQVNQAASASGDGGSPPMPVKK
Ga0268240_100649802	3300030496	Soil	DILQYDSVADEFEFEEVGSDIAVSPSNTTTCDSQVNQAASASG
Ga0268240_101546451	3300030496	Soil	GVGNTGNAQNLTDVLQYGSTADEFEFEEVGSSIDVSPANSTECTSEVNQAASASG
Ga0268243_11423982	3300030510	Soil	NTGNAQNVTDILQYGSTAYEFEFEEVGSTITVSPTNSATCDQQVNQAASASGSG
Ga0268243_11545771	3300030510	Soil	QGVANTGNTQNQIDLIQYGSEADDFEFDEVGSTLTVSPTNSATCDQKVQQAASASG
Ga0268243_11549512	3300030510	Soil	VGNTGNAQNITDILQYGSTADEFEFEEVGSTITVSPTNTTTCTDRVQQAASAAG
Ga0268243_11965811	3300030510	Soil	DFIQANSIADDFEFDEVGSAIDESPANTATCDQQVNQADSASA
Ga0268243_11970371	3300030510	Soil	AQNLTDVIQYGSEADDFEFEEVGSTIDVSPANTTTCDQQVNQAASASG
Ga0268242_10073721	3300030513	Soil	YGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAAAASG
Ga0268242_11382901	3300030513	Soil	NVTDVLQYGSTADEFEFEEVGSTITVSPTNETTCDQQVNQAATAAG
Ga0268242_11412852	3300030513	Soil	GVGNTGNAQNVTDILQYGSTADEFEFEEVGSTITVSPTNTATCDQQVNQAASASGSG
Ga0268254_101623191	3300030515	Agave	QNLTDVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAASASG
Ga0268251_100066056	3300032159	Agave	QGVGNTGNAQNVTDVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAASASG
Ga0268251_100464201	3300032159	Agave	IQGVGNTGNAQNLTDVLQYGSTADEFEFEEVGSSIDVSPANSTECTSEVNQAASASG
Ga0334924_000828_2395_2553	3300033989	Hypolithic Biocrust	NTGNAQNQLDLIQYGSEADDFEFDEVGSTITTSPANTATCDQQVNQAASAAA
Ga0334918_041811_1_168	3300034000	Hypolithic Biocrust	VANTGNAQNQLDLIQYGSEADDFEFDEVGSSVDVSPSSTTECDQQVNQAASASGS
Ga0334919_086494_1_141	3300034001	Hypolithic Biocrust	NQIDLIQYGSEADDFEFDEVGSSVDVSPSNTTTCDQQVNQAASASG
Ga0334930_062918_457_633	3300034005	Sub-Biocrust Soil	VANTGNSQNQLDLIQYGSTADDFEFDEVGSTITVNPNEDVDDVYTCTTQVNQAASASG
Ga0334936_003012_1_120	3300034007	Biocrust	YGSEADDFEFDEVGSSVDVSPSSTTECTQEVNQAASASG
Ga0334936_005454_3056_3196	3300034007	Biocrust	NQIDLIQYGSEADDFEFDEGGSTLDVSPTSTTECDQQVNQAASASG
Ga0334936_063624_591_761	3300034007	Biocrust	SGVANTGNAQNQIDLIQYGSEADDFEFDEVGSSVDVSPSNTTTCDQQVNQAASASG
Ga0334936_079261_520_681	3300034007	Biocrust	QTGNAQNQLDLIQYGSEADDFEFDEVGSSLEVSPANSTTCEQKVQQAASASGS
Ga0334936_092399_3_119	3300034007	Biocrust	GSEADDFEFDEVGSSVDVSPSSTTECTQEVNQAASAAA
Ga0334944_035169_4_168	3300034009	Sub-Biocrust Soil	VANTGNAQNQLDLIQYGSEADDFELDEVGSDIAVSPENSATCDEQVNQAASATG
Ga0334944_054722_607_756	3300034009	Sub-Biocrust Soil	NAQNQIDLIQYGSEADDFEFDEGGSTLDVSPTSTTECDQQVNQAASASG
Ga0334946_055080_487_666	3300034026	Sub-Biocrust Soil	AGIQGVANTGNAQNQIDLIQYGSEADDFEFDEGGSTLDVSPESSTTCDQQVNQAASASG
Ga0334911_019008_2_133	3300034131	Sub-Biocrust Soil	DILQYGSTADEFEFEEVGSTITVSGTNPVTCDQQVNQAASAAA
Ga0334911_037228_1_171	3300034131	Sub-Biocrust Soil	QGVANTGNAQNQLDLIQYGSEADDFEFDEVGSSVDVSPSNTTTCDQQVNQAASASG
Ga0334911_045603_463_627	3300034131	Sub-Biocrust Soil	ANTGNAQNQLDLIQYGSEADDFEFDEVGSSVEVSPSSTTECDQQVNQAASASGS
Ga0334915_011073_1_168	3300034132	Hypolithic Biocrust	GVGQTGNSQNQLDLVQFESEADDFEFDEVGSSIDESPTNTATCDQQVNQAASASA
Ga0334915_050054_4_141	3300034132	Hypolithic Biocrust	VTDVLQYGSTADEFEFEEVGSTITVSPTNSTECTDQVNQAASASG
Ga0334915_095257_2_160	3300034132	Hypolithic Biocrust	NTGNAQNITDILQYGSTADEFEFEEVGSTITVSPTNSTTCTDQVNQAASAAA
Ga0334916_009339_870_1034	3300034133	Hypolithic Biocrust	VANTGNAQNQLDLIQYGSEADDFEFDEVGSSLDVSPASTTECDQQVNQAASASG
Ga0334916_010857_877_1020	3300034133	Hypolithic Biocrust	QNQIDLIQYGSEADDFEFDEVGSSVDVSPSNTTTCDQQVNQAASASG
Ga0334933_061859_2_166	3300034136	Sub-Biocrust Soil	ANTGNAQNQLDLIQYGSEADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASGS
Ga0334943_041657_732_872	3300034137	Biocrust	NQLDLIQYGSEADDFEFDEVGSSLEVSPSSTTECNQQVNQAATAAG
Ga0334913_087443_492_656	3300034172	Sub-Biocrust Soil	NTGNPQNITDILQYGSTADEFEFEEVGSTITVSPTNSTTCTDQVNQAASASGSG
Ga0334937_208478_31_195	3300034221	Biocrust	VANTGNAQNQIDLIQYGSEADDFEFDEGGSTLDVSPTSTTECDQQVNQAASASG
Ga0334923_003621_2708_2839	3300034376	Hypolithic Biocrust	DLIQYGSEADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASG
Ga0334923_066761_3_146	3300034376	Hypolithic Biocrust	NQLDLIQYGSEADDFEFDEVGSNVDVSPSSTTECTQEVNQAASASGS
Ga0334923_116662_403_552	3300034376	Hypolithic Biocrust	NAQNQIDLIQYGSEADDFEFDEVGSSVDVSPSNTTTCDQQVNQAASASG
Ga0334931_002192_2_124	3300034377	Sub-Biocrust Soil	QYGSEADDFEFDEVGSSVDVSPSSTTECTQEVNQAASASG
Ga0334931_039864_1_156	3300034377	Sub-Biocrust Soil	TGNTQNVTDILQYGSTADEFEFEEVGSTITVSPTNETTCDQQVNQAATAAG
Ga0334931_114207_1_153	3300034377	Sub-Biocrust Soil	GNSQNQIDLIQYGSEADDFEFDEVGSSLEVSPANSTSCEQKVQQAASASG
Ga0334931_156016_392_550	3300034377	Sub-Biocrust Soil	NTGNAQNQIGVLQYGSEADDFEFDGVGSDISVSPESSTTCDQQVNQAASAAA
Ga0334917_071197_526_648	3300034391	Hypolithic Biocrust	QYGSTADEFEFEEVGSDITLSPSNPVTCDQQVNQAASASG
Ga0334917_119002_1_138	3300034391	Hypolithic Biocrust	QTNLIQYGSTADDFEFDEVGSTITSSPVNTTECTQQVNQAASAAA
Ga0334905_074216_374_526	3300034687	Soil	GNAQNQIDLVQFFSLADDFEFDEVGSDVDVSPENSTTCDQQVNQAASASG
Ga0334935_015453_1838_1984	3300034781	Biocrust	AQNQLDLIQYGSEADDFEFDEVGSSVDVSPSSTTECTQEVNQAASATG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051625

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences