Metagenome Family F051957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051957
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	60 residues
Representative Sequence	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIE
Number of Associated Samples	117
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.79 %
% of genes near scaffold ends (potentially truncated)	93.71 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.210 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.790 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.343 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.81% β-sheet: 0.00% Coil/Unstructured: 51.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF13180	PDZ_2	23.08
PF03572	Peptidase_S41	1.40
PF00595	PDZ	1.40
PF02540	NAD_synthase	0.70
PF00291	PALP	0.70
PF13302	Acetyltransf_3	0.70
PF01370	Epimerase	0.70
PF02780	Transketolase_C	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	1.40
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.21 %
Unclassified	root	N/A	9.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.21 %
Unclassified	root	N/A	9.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.21 %
Unclassified	root	N/A	9.79 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	47.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.48 %
Unclassified	root	N/A	9.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	46.15 %
Unclassified	root	N/A	9.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.10 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	1.40 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.40 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.40 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	46.15 %
Unclassified	root	N/A	9.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.10 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.40 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.40 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.70 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.70 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	46.15 %
Unclassified	root	N/A	9.79 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.40 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	1.40 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.70 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	0.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.70 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	46.15 %
Unclassified	root	N/A	9.79 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.40 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.40 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Croceicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus	0.70 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.70 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.70 %
Acidothermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae	0.70 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	46.15 %
Unclassified	root	N/A	9.79 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1.40 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.40 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.70 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.70 %
Acidothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus	0.70 %
Oceanobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Oceanobacillus	0.70 %
Croceicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	46.15 %
Unclassified	root	N/A	9.79 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1.40 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.40 %
Geothrix fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.40 %
Oceanobacillus kimchii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Oceanobacillus → Oceanobacillus kimchii	0.70 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.70 %
Nocardia transvalensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia transvalensis	0.70 %
Nocardiopsis lucentensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis lucentensis	0.70 %
Croceicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11689027	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	772	Open in IMG/M
3300000789\|JGI1027J11758_12852375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	504	Open in IMG/M
3300001139\|JGI10220J13317_11839435	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	648	Open in IMG/M
3300001686\|C688J18823_10638598	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	678	Open in IMG/M
3300002568\|C688J35102_119363826	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	681	Open in IMG/M
3300002568\|C688J35102_120151010	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300003267\|soilL1_10045494	All Organisms → cellular organisms → Bacteria → Acidobacteria	2921	Open in IMG/M
3300004114\|Ga0062593_102839868	Not Available	553	Open in IMG/M
3300004156\|Ga0062589_100307298	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300004463\|Ga0063356_104216905	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	619	Open in IMG/M
3300004479\|Ga0062595_100474323	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300004479\|Ga0062595_101272641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	659	Open in IMG/M
3300004479\|Ga0062595_102306100	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	531	Open in IMG/M
3300004480\|Ga0062592_100353837	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300005093\|Ga0062594_102312122	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	585	Open in IMG/M
3300005288\|Ga0065714_10356998	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	629	Open in IMG/M
3300005331\|Ga0070670_101158760	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	706	Open in IMG/M
3300005331\|Ga0070670_101393055	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	643	Open in IMG/M
3300005332\|Ga0066388_106664621	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	582	Open in IMG/M
3300005333\|Ga0070677_10314791	Not Available	800	Open in IMG/M
3300005336\|Ga0070680_101664218	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	553	Open in IMG/M
3300005338\|Ga0068868_101580425	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	616	Open in IMG/M
3300005339\|Ga0070660_101875095	Not Available	511	Open in IMG/M
3300005344\|Ga0070661_101862630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Oceanobacillus → Oceanobacillus kimchii	511	Open in IMG/M
3300005345\|Ga0070692_10621422	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300005345\|Ga0070692_11389631	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	507	Open in IMG/M
3300005353\|Ga0070669_100250811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300005364\|Ga0070673_100787187	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005365\|Ga0070688_100187031	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300005365\|Ga0070688_100415804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300005366\|Ga0070659_100589184	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005406\|Ga0070703_10107834	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005438\|Ga0070701_10590920	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	734	Open in IMG/M
3300005441\|Ga0070700_100163507	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300005441\|Ga0070700_100648190	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	834	Open in IMG/M
3300005459\|Ga0068867_101752346	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	583	Open in IMG/M
3300005459\|Ga0068867_101976557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → Geothrix fermentans	551	Open in IMG/M
3300005518\|Ga0070699_100183514	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300005539\|Ga0068853_100620683	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005539\|Ga0068853_100909569	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005555\|Ga0066692_10329120	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300005563\|Ga0068855_101067321	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005615\|Ga0070702_100201231	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300005618\|Ga0068864_100219546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1754	Open in IMG/M
3300005618\|Ga0068864_100917479	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300005618\|Ga0068864_101282596	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005618\|Ga0068864_101300059	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005764\|Ga0066903_108332444	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005834\|Ga0068851_11074612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia transvalensis	510	Open in IMG/M
3300005843\|Ga0068860_100099849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2768	Open in IMG/M
3300006031\|Ga0066651_10680560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis lucentensis	551	Open in IMG/M
3300006046\|Ga0066652_100303069	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1420	Open in IMG/M
3300006358\|Ga0068871_101389336	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	662	Open in IMG/M
3300006804\|Ga0079221_10823349	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006806\|Ga0079220_10144638	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300006844\|Ga0075428_100749967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300006852\|Ga0075433_11076342	Not Available	699	Open in IMG/M
3300006894\|Ga0079215_11547177	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	525	Open in IMG/M
3300007255\|Ga0099791_10573023	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	551	Open in IMG/M
3300009011\|Ga0105251_10445283	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	600	Open in IMG/M
3300009094\|Ga0111539_11311538	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300009094\|Ga0111539_13433498	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	509	Open in IMG/M
3300009101\|Ga0105247_11281856	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	587	Open in IMG/M
3300009101\|Ga0105247_11864686	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	502	Open in IMG/M
3300009147\|Ga0114129_12995869	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	555	Open in IMG/M
3300009148\|Ga0105243_11494594	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	699	Open in IMG/M
3300009156\|Ga0111538_10263725	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	2180	Open in IMG/M
3300009162\|Ga0075423_12703431	Not Available	543	Open in IMG/M
3300009177\|Ga0105248_10143837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2691	Open in IMG/M
3300010036\|Ga0126305_10104026	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1710	Open in IMG/M
3300010038\|Ga0126315_10728163	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	649	Open in IMG/M
3300010040\|Ga0126308_10460606	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300010043\|Ga0126380_11746411	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	561	Open in IMG/M
3300010046\|Ga0126384_10494149	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300010047\|Ga0126382_10253498	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1291	Open in IMG/M
3300010360\|Ga0126372_12564032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300010397\|Ga0134124_10249331	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1633	Open in IMG/M
3300010397\|Ga0134124_11405066	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	724	Open in IMG/M
3300010400\|Ga0134122_11883454	Not Available	633	Open in IMG/M
3300012021\|Ga0120192_10065362	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300012096\|Ga0137389_11776611	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	512	Open in IMG/M
3300012157\|Ga0137353_1048795	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	766	Open in IMG/M
3300012357\|Ga0137384_10374231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1178	Open in IMG/M
3300012681\|Ga0136613_10164071	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300012917\|Ga0137395_10327800	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1088	Open in IMG/M
3300012989\|Ga0164305_11294644	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	637	Open in IMG/M
3300013307\|Ga0157372_10391983	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1618	Open in IMG/M
3300013760\|Ga0120188_1020510	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	688	Open in IMG/M
3300014969\|Ga0157376_11699559	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	666	Open in IMG/M
3300018027\|Ga0184605_10539875	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	504	Open in IMG/M
3300018076\|Ga0184609_10032384	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	2158	Open in IMG/M
3300018466\|Ga0190268_10283191	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300018469\|Ga0190270_12860908	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	545	Open in IMG/M
3300019883\|Ga0193725_1073803	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	839	Open in IMG/M
3300021445\|Ga0182009_10247134	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300024430\|Ga0196962_10325835	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	507	Open in IMG/M
3300025900\|Ga0207710_10000655	All Organisms → cellular organisms → Bacteria → Acidobacteria	19599	Open in IMG/M
3300025901\|Ga0207688_10896266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Croceicoccus	562	Open in IMG/M
3300025911\|Ga0207654_11136838	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	569	Open in IMG/M
3300025919\|Ga0207657_10992979	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	644	Open in IMG/M
3300025923\|Ga0207681_10290467	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300025925\|Ga0207650_10982375	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	718	Open in IMG/M
3300025931\|Ga0207644_10211510	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1534	Open in IMG/M
3300025933\|Ga0207706_10547166	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300025935\|Ga0207709_11721391	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	521	Open in IMG/M
3300025944\|Ga0207661_10678125	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300025945\|Ga0207679_10379299	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300025960\|Ga0207651_10071127	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	2464	Open in IMG/M
3300025960\|Ga0207651_10694336	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300026089\|Ga0207648_10170453	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1924	Open in IMG/M
3300026095\|Ga0207676_10713859	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300026095\|Ga0207676_10905185	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300026095\|Ga0207676_11448058	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	683	Open in IMG/M
3300026095\|Ga0207676_12089397	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	565	Open in IMG/M
3300026116\|Ga0207674_10425243	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1283	Open in IMG/M
3300026116\|Ga0207674_12253384	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	507	Open in IMG/M
3300026118\|Ga0207675_101855299	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	622	Open in IMG/M
3300026118\|Ga0207675_102344843	Not Available	547	Open in IMG/M
3300027605\|Ga0209329_1062278	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	802	Open in IMG/M
3300027716\|Ga0209682_10032989	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300027775\|Ga0209177_10024603	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1524	Open in IMG/M
3300028381\|Ga0268264_10029795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	4472	Open in IMG/M
3300028381\|Ga0268264_12346726	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	540	Open in IMG/M
3300030496\|Ga0268240_10056327	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300031538\|Ga0310888_10429246	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	780	Open in IMG/M
3300031538\|Ga0310888_10708517	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	618	Open in IMG/M
3300031547\|Ga0310887_10110718	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300031824\|Ga0307413_10333731	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300031852\|Ga0307410_10390663	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300031892\|Ga0310893_10013845	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	2257	Open in IMG/M
3300031903\|Ga0307407_10535935	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300032000\|Ga0310903_10052975	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1567	Open in IMG/M
3300032013\|Ga0310906_11448654	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	505	Open in IMG/M
3300032017\|Ga0310899_10537144	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	578	Open in IMG/M
3300032180\|Ga0307471_100798648	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032180\|Ga0307471_102343994	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.85%
Host-Associated	Host-Associated	46.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.95%
Plants	Host-Associated → Plants	46.15%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.58%
Sediment	Environmental → Aquatic → Sediment	2.80%
Freshwater	Environmental → Aquatic → Freshwater	2.10%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.99%
Loam	Environmental → Terrestrial → Soil → Loam	12.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Ice	Environmental → Aquatic → Freshwater → Ice	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.70%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.10%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.10%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.40%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.70%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_116890272	3300000789	Soil	MAGLSRDELFSFATGHRDEYEGLLRQFVETPTVSVDPAHKEDIRKGVDXTVETFR
JGI1027J11758_128523751	3300000789	Soil	MPTTLNRDSLRAFASEHRDEFEGLLRQFVETPTVSVDPAHAADIARGVELTVETIERV
JGI10220J13317_118394351	3300001139	Soil	MPTTLKRENLVSFANQHREEYESLLRRFVETPTVSVDPNHLDDIKKGVELTVETLEQFGGKAE
C688J18823_106385982	3300001686	Soil	MPKDLSRDSLVSFAKTHRDEYETLLRDFVETPTVSVDPAHAGDIAKGVEMVVETFKRFGAQAEVHRINK
C688J35102_1193638261	3300002568	Soil	MPKDLSRDSLVSFAKTHRDEYETLLRDFVETPTVSVDPAHAGDIAKGVEMVVETFKRFGAQAEVHRINKGYPSVH
C688J35102_1201510102	3300002568	Soil	MSTTLNRDSLLSFANSHRDEYESLLQRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKAEVYR
soilL1_100454941	3300003267	Sugarcane Root And Bulk Soil	MPTTLKRDRLVSFANEHRSEFETLLRRFVETPTVSVDPNHLDDIRKGVE
Ga0062593_1028398681	3300004114	Soil	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVE
Ga0062589_1003072981	3300004156	Soil	MPTTLKRDSLLSFANSHREEFETLLKRFVETPTVSVDPAHADDIRKGVELTVETIEGY
Ga0063356_1042169052	3300004463	Arabidopsis Thaliana Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLDDIRKGV
Ga0062595_1004743232	3300004479	Soil	MPTTLKRDSLLSFANSHREEFETLLQSFVETPTVSVDPGHAEDIRKGVDLTVATIQRYGGKVEVYKAEKGNP
Ga0062595_1012726411	3300004479	Soil	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPNHLPDIKKGLDLTVATIEKFGGKADVYSAGKGNPLVHAVFGNDT
Ga0062595_1023061001	3300004479	Soil	MPTTLKRDSLLSFANSHRDEFENLLRRFVETPTVSVDPNHLDDIKKGVELTVETIEGCGGKAEVYRAEKGNP
Ga0062592_1003538372	3300004480	Soil	MPTTLKRDTLLSFANSHREEFESLLQRFVETPTVSVDPGHLNDIKKGVEL
Ga0062594_1023121221	3300005093	Soil	MPTTLKRDSLLSFANSHREEFESLLKRFVETPTVSVDPGHADDIRKGVELTAE
Ga0065696_12211981	3300005280	Switchgrass Rhizosphere Bulk Soil	MANTLDRDQLFSFAENHRAEYEALLKRFVETPTVSCDPAHAED
Ga0065714_103569981	3300005288	Miscanthus Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVELPTVSVDPNHLEDIKKGVELTVETIEGYGGKAEVYRAEKGNPVIH
Ga0070670_1011587602	3300005331	Switchgrass Rhizosphere	MPTPLKRDNLLSFAESHRDEFEGLLRQFVEIPTVSVDPNHLEDIKKGVE
Ga0070670_1013930552	3300005331	Switchgrass Rhizosphere	MPTTLTRENLLSFANEHRDEYEALLRRFVETPTVSVDPNHLGDIKQGVELTVETLEKFGGKVEVYRADKGNPV
Ga0066388_1066646211	3300005332	Tropical Forest Soil	MPTTLKRDSLLSFANSHRDEFENLLQRFVETLTVSVDPSHADDIRKGVDLTVATIENYGGIVEIYRAEKGN
Ga0070677_103147911	3300005333	Miscanthus Rhizosphere	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTVE
Ga0070680_1016642181	3300005336	Corn Rhizosphere	MPTTLKRDSLLSFANSHRDEFEKLLQRFVETPTVSVDPNHLSDIKKGVEL
Ga0068868_1015804252	3300005338	Miscanthus Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLKRFVETPTVSVDPNHLDDIRKGVELTAETLEGYGGKV
Ga0070660_1018750951	3300005339	Corn Rhizosphere	MPTTLKRENLVSFANDHREEFESLLRRFVETPTVSVDPNHLDDIKKGVELTVE
Ga0070661_1018626301	3300005344	Corn Rhizosphere	MPTTLKREKLVSFANDHREEFETLLRRFVETPTVSVDPNHLDDIRKGVELTVETLER
Ga0070692_106214221	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLQRFVEIPTVSVDPSHAEDIRKGVD
Ga0070692_113896311	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLKRDSLLSFANSHREEFETVLQRFVETPTVSVDPGHAEDIRKGVDLTVSTIEGYGGKAEVYKAEKGNPVI
Ga0070669_1002508111	3300005353	Switchgrass Rhizosphere	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPNHLPDIKKGLDLTVATIEKFGGKADVYSAGKGNPLVHAV
Ga0070673_1007871872	3300005364	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPGHAEDIRKGVDLT
Ga0070688_1001870311	3300005365	Switchgrass Rhizosphere	MPTSLKREKLVSFANEHRSEFEALLRRFVETPTVSVDPNHLDDIRKGVELTVETIEGFGGKAEVYRADKGNP
Ga0070688_1004158041	3300005365	Switchgrass Rhizosphere	MPKDLDRDQLFKFANYHRQEYEDLLQRFVETPTVSCDPAHAEDIRKG
Ga0070659_1005891842	3300005366	Corn Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKVE
Ga0070703_101078341	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLKRDNLMSFAESHREEFEGLLQRFVETPTVSVDPNHLEDIRKGVDLTVETIEKYGGKV
Ga0070701_105909201	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTVETLEGFGGKAEVYRADKGNPV
Ga0070700_1001635072	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPNHLPDIKKGLDLTVATIEKFG
Ga0070700_1006481902	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLKRDNLMSFAESHREEFEGLLQRFVETPTVSVDPNHLEDIRKGVDLTVETIEKYGG
Ga0068867_1017523461	3300005459	Miscanthus Rhizosphere	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTVETLEGFGGKAEVYRADK
Ga0068867_1019765571	3300005459	Miscanthus Rhizosphere	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPNHLPDIKKGLDLTVATIEKFGGKADVYSAGKGNPLVHAVFGNDM
Ga0070699_1001835141	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAVFPDGGRRMPDELKRDRLLAFSNSHRDEYESLLKEFVETPTVSCDPAHTPDIKKGVEL
Ga0068853_1006206832	3300005539	Corn Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLQRFVETPTVSVDPNHLEDIRKGVELTV
Ga0068853_1009095691	3300005539	Corn Rhizosphere	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGG
Ga0070672_1002580721	3300005543	Miscanthus Rhizosphere	MPKDLDRDQLFKFANYHRQEYEDLLQRFVETPTVSCDPAHAEDIR
Ga0066692_103291202	3300005555	Soil	MTSGMTRDQLVSFANSHRDEFEDLLRRFVETPTVSVDPAHLGDIQNCLHLVVETINKFGGRAEVYQAAKGN
Ga0068855_1010673212	3300005563	Corn Rhizosphere	MPTTLKRDSLLSFANSHREEFEALLKRFVETPTVSVDPNHAEDIRKGVELTAETLEGYGG
Ga0070702_1002012311	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPTTLKRDSLLSFANSHREEFESLLKRFVETPTVSVDPNHAEDIKKGVELTA
Ga0068859_1008462513	3300005617	Switchgrass Rhizosphere	MASQLDRNQLFAFAQSHRDEYEALLKRFVETPTVSCDPAHAADI
Ga0068864_1002195461	3300005618	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHREEYESLLRRFVELPTVSVDPNHLEDIRKGVDLTVETIEGYGGKVEVYRAEKGNP
Ga0068864_1009174791	3300005618	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFEALLKRFVETPTVSVDPNHAEDIKKGVELTAETLEGYG
Ga0068864_1012825962	3300005618	Switchgrass Rhizosphere	MPTTLKRDSLFSFANSHREEFEALLKRFVETPTVSVDPNHAEDIKKG
Ga0068864_1013000591	3300005618	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFESLLKRFVETPTVSVDPGHADDIRKGVE
Ga0066903_1083324441	3300005764	Tropical Forest Soil	MTKQLNRAELNAFADSHRSEYEDLLRRFVETPTVSVDPAHLNDIHQGVEMVVETFGK
Ga0068851_110746121	3300005834	Corn Rhizosphere	MSKTLNRDSLLSFANSHRDEYESLLQRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKA
Ga0068860_1000998494	3300005843	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFEKLLQRFVETPTVSVDPNHLDDIKKGVELTVETIEGYGGKA
Ga0066651_106805601	3300006031	Soil	MATPLKRDNLLSFANSHRDEFETLLRRFVETPTVSVDPGHADDIRKGLELTVETIE
Ga0066652_1003030692	3300006046	Soil	MATPLKRDSLLSFANSHRDEFETLLRRFVETPTVSVDPGHADDIRKGLELTVETIEKYGGQAEVYRAEKGNP
Ga0068871_1013893362	3300006358	Miscanthus Rhizosphere	MPTTLKRDSLLSFANSHREEFEKLLQRFVETPTVSVDPNHLDDIKKGVELTVETIEGYGG
Ga0079221_108233492	3300006804	Agricultural Soil	MPTTLKRDSLMSFANSHRDEFETLLKRFVETPTVSVDPAHADDIRKGVELTAATLEGYGG
Ga0079220_101446382	3300006806	Agricultural Soil	MPTTLKRDRLVSFANEHRSEFETLLRRFVETPTVSVDPNHLDDIRKGVELTVETLESFGGKAEVYRADKGNPV
Ga0075428_1007499671	3300006844	Populus Rhizosphere	MPTSLSRESLFSFAKDHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGGKADV
Ga0075433_110763422	3300006852	Populus Rhizosphere	MPTTLSRESLLSYAKKHRQEYEDLLRRFVETPTVSVDPNHHDDIRKGLELTVETVER
Ga0079215_115471772	3300006894	Agricultural Soil	MPLKRDSLLSFANSHREEFETLLKRFVETPTVSVDPNHLDDIRKGVELTVET
Ga0099791_105730231	3300007255	Vadose Zone Soil	MPTPLNRDSLFSYAKEHRQEFEGLLRRFVETPTVSCDPAHAEDIKKGLSLT
Ga0105251_104452832	3300009011	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPGHAEDIRKGVDLTVQ
Ga0111539_113115382	3300009094	Populus Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPSHAEDIRKGVDLTVAHLEDTR
Ga0111539_134334981	3300009094	Populus Rhizosphere	MPTSLKRDSLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTVETLEGFGGKAE
Ga0105247_112818561	3300009101	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVELPTVSVDPNHLEDIKKGVELTVETIEGYGGKDEVYRAEKGNP
Ga0105247_118646861	3300009101	Switchgrass Rhizosphere	MPTTLKRENLVSFANDHRDEYESLLRRFVETPTVSVDPAHLDDIKKGVELTVETLERFGGKAQVYSAAKGNPVVH
Ga0114129_129958692	3300009147	Populus Rhizosphere	MPTSLKRDSLVSFANEHRSEYEALLRRFVETPTVSVDPNHLDDIRKGVELTVETLESFGGKAEVYHADKGNPVI
Ga0105243_114945941	3300009148	Miscanthus Rhizosphere	MPTTLRRDSLLSFANSHREEFESLLQRFVETPTVSVDPNHLEDIRKGVDLTVETIEKYGG
Ga0111538_102637252	3300009156	Populus Rhizosphere	MPTSLSRESLFSYTEDHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGGKADVYGV
Ga0075423_127034312	3300009162	Populus Rhizosphere	MPTTLSRESLLSYAKKHRQEYEDLLRRFVETPTVSVDPNHLDDIRKGLELTVETVERFGGKVTVYSA
Ga0105248_101438373	3300009177	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHREEFEALLKRFVETPTVSVDPNHAEDIKKGVELTA
Ga0126305_101040261	3300010036	Serpentine Soil	MPTTLKRDSLLSFANSHREEFESLLQRFVETPTVSVDPNHAEDIKKGVELTVSTLEGYGGKAEVYRA
Ga0126315_107281631	3300010038	Serpentine Soil	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIE
Ga0126308_104606062	3300010040	Serpentine Soil	MPTTLKRDSLLSFANSHREEYESLLRRFVETPTVSVDPGHLDDIRKGVELTVE
Ga0126380_117464111	3300010043	Tropical Forest Soil	MPTTLKRDSLLSFANSHREEFETLLKRFVETPTVSVDPNHAEDIKKGVELTAATLEGYGG
Ga0126384_104941491	3300010046	Tropical Forest Soil	MPTTLKRQNLVSFANDHRQEYETLLQRFVETPTVSVDPNHLDDIRKGVELTVETLEKFGGQTQ
Ga0126382_102534982	3300010047	Tropical Forest Soil	MPTTLKRDSLLSFANSHREEFETLLQRFVEIPTVSVDPGHAEDITKGVELTVATIE
Ga0126372_125640321	3300010360	Tropical Forest Soil	MSQGLVRENLLSFASNHRAQYEDLLKRFVETPTVSVDPAHLDDIRKG
Ga0134124_102493311	3300010397	Terrestrial Soil	MSFAESHREEFEGLLQRFVETPTVSVDPNHLEDIRKGVDL
Ga0134124_114050661	3300010397	Terrestrial Soil	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPGHAEDIRKGVDLTVATLEGYGGKVEVYR
Ga0134122_106290291	3300010400	Terrestrial Soil	MANSLNRDQLFSFAKKNRNEYETLLKRFVETPTVSVDPDHAGDIRTG
Ga0134122_118834541	3300010400	Terrestrial Soil	MSTTLNRDSLLSFANSQRDEYESLLRRFVELPTVSVDPNHLEDIKKGVELTIETIEGYGGKAEVYRAEKGNPVI
Ga0120192_100653622	3300012021	Terrestrial	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPNHADDIRKGVELTAETLEGYGGESGN*
Ga0137389_117766111	3300012096	Vadose Zone Soil	MTSGMTRDQLVSFANSHRDEFEDLLRRFVETPTVSVDPAHLGDIQNCLHLVVETINKFGGRAEVY
Ga0137353_10487951	3300012157	Soil	MANALERDQLFSFAKSHREEYEALLKRFVETPTVSVDPAHLGDIRAGVDLTVET
Ga0137384_103742311	3300012357	Vadose Zone Soil	MPTPLDRKKLFSYANDHRQEYESLLRRFVETPTVSCDPAYAEDIKKGLDLTVGTFEKFDGKPNVYRTDKGN
Ga0136633_12421241	3300012527	Polar Desert Sand	MAKQLQRDQLFSFAEDHKEEYEELLRQFVETPTVSVDPAHAEDIRQGVDLTVQT
Ga0136613_101640711	3300012681	Polar Desert Sand	MVSTIRGGLRMAKQLQRDELFSFAENHREEYEELLGQFVETPTVSVDPAHAEDI
Ga0137395_103278003	3300012917	Vadose Zone Soil	MPTPLDRNKLFSYANDHRQEYESLLRHFVETPTVSCDPAYAEDIKKGLDLTVGTFEKFDGKPNVYRTDKGNPLVHCIFGSD
Ga0164305_112946441	3300012989	Soil	MPATLNRDELFSFTAKNRNEYEALLKRFVETPTVSVDPAHKPDIQKGVEL
Ga0157372_103919831	3300013307	Corn Rhizosphere	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPSHAEDIRKGVDLTVATIEGYGGKV
Ga0120188_10205101	3300013760	Terrestrial	MVTTLNRDQLFSFAGNHRQEYEDLLKRFVETPTVSVDPAHAPDIKAGLDLTVDTLRKYGG
Ga0157376_116995591	3300014969	Miscanthus Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKAEV
Ga0184605_105398751	3300018027	Groundwater Sediment	MANALDRNQLFSFAKSHRDEYEALLKRFVETPTVSCDPSHAEDIRAGL
Ga0184632_102764201	3300018075	Groundwater Sediment	MAKQLQRDQLFSFATNHREEYEELLRQFVETPTVSVDPAHSEDIRKGVDLTVETLRRF
Ga0184609_100323842	3300018076	Groundwater Sediment	MAKQLQRDQLFSFATNHREEYEELLRQFVETPTVSVDPAHSEDIRKGVDLTVETLR
Ga0190268_102831912	3300018466	Soil	MPTPLKRDNLLSFANSHREEFEALLQQFVETPTVSVDPNHLEDIRKGVELTVKTI
Ga0190270_128609081	3300018469	Soil	MANTLDRDQLFSFAKTHRDEYEALLKRFVETPTVSCDPSHAEDIRAG
Ga0193725_10738031	3300019883	Soil	MANSLDRNQLFSFARSHRDEYETLLKRFVETPTVSCDPSHAEDIRKGVDLTVET
Ga0182009_102471342	3300021445	Soil	MSKTLNRDSLLSFANSHRDEYESLLQRFVQTPTVSVDPNHLEDIKKGVELTVETIEGYGGKAEVYRAEKGNPVIH
Ga0196962_103258351	3300024430	Soil	MSTTLNRDSLLSFANSHREEYESLLRRFVELPTVSVDPNHLEDIRKGVELTVETI
Ga0209519_105093562	3300025318	Soil	MAEELGREQLFSFAKTHRNEFEQLLRQFVETPTVSCDPAHA
Ga0207710_100006551	3300025900	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIEG
Ga0207688_108962662	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	DSLLSFANSHRDEFEKLLQRFVETPTVSVDPNHLDDIKKGVDLTVETIEGYGGKAETGRSMRYNWA
Ga0207654_111368382	3300025911	Corn Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIEGCGGKAEVYRAEK
Ga0207657_109929791	3300025919	Corn Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGV
Ga0207681_102904672	3300025923	Switchgrass Rhizosphere	MPTTLSRESLFSYAKDHQEEYEDLLRRFVETPTVSVDPNHLPDIKKGLDLTVATIEKFGG
Ga0207650_109823751	3300025925	Switchgrass Rhizosphere	MPTPLKRDNLLSFAESHRDEFEGLLRQFVEIPTVSVDPNHLEDIKKGVELT
Ga0207644_102115102	3300025931	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHRDEYESLLRRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKV
Ga0207706_105471662	3300025933	Corn Rhizosphere	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTV
Ga0207709_117213911	3300025935	Miscanthus Rhizosphere	MPTTLRRDSLLSFANSHREEFESLLQRFVETPTVSVDPNHLEDIRKGVEL
Ga0207661_106781252	3300025944	Corn Rhizosphere	MSKTLNRDSLLSFANSHRDEYESLLQRFVETPTVSVDPNHLEDIRKGVELTVETIEGYGGKAEVYRAEKGNPVIH
Ga0207679_103792991	3300025945	Corn Rhizosphere	MPTTLKRDSLLAFANSHREEFESLLKRFVETPTVSVDPNHAEDIKKGV
Ga0207651_100711273	3300025960	Switchgrass Rhizosphere	MPNDLSRDSLVSFAKTHREEYETLLREFVETPTVSVDPAHAGDIAKGVEMVV
Ga0207651_106943362	3300025960	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHRDEFENLLRRFVETPTVSVDPNHLDDIKKGVELTVETIEGYGG
Ga0207648_101704532	3300026089	Miscanthus Rhizosphere	MPTSLSRESLFSYTEDHRKEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGG
Ga0207676_107138592	3300026095	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHRDEFEALLKRFVETPTVSVDPNHAEDIRKGV
Ga0207676_109051851	3300026095	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHREEYESLLRRFVELPTVSVDPNHLEDIRKGVELTVETIEGYGGKVEVYRAEKGNP
Ga0207676_114480581	3300026095	Switchgrass Rhizosphere	MPTTLKRENLVSFANEHREEYESLLRRFVETPTVSVDPNHLDDIKKGVELTVETLEQFG
Ga0207676_120893971	3300026095	Switchgrass Rhizosphere	MSTTLNRDSLLSFANSHREEYESLLQRFVELPTVSVDPNHLEDIRKGVELTVETIEGYGG
Ga0207674_104252432	3300026116	Corn Rhizosphere	MPTTLKRDSLLSFANSHREEFEALLKRFVETPTVSVDPNHAEDIKKGVELTAE
Ga0207674_122533841	3300026116	Corn Rhizosphere	MPTTLKRENLVSFANDHRDEYESLLRRFVETPTVSVDPAHLDDIKKGVELTVETLERFGGKAQVYSAAK
Ga0207675_1018552992	3300026118	Switchgrass Rhizosphere	MPTSLKRENLVSFANEHRSEFEALLRRFVETPTVSVDPNHLDDIRKGVELTVETLEGFGGKTEVYRADKGNPV
Ga0207675_1023448431	3300026118	Switchgrass Rhizosphere	MPTTLKRDRLVSFANEHRSEFENLLRRFVETPTVSVDPNHLDDIRKGVELTVETLESFGGKA
Ga0209329_10622781	3300027605	Forest Soil	MTSGMTRDQLVSFASSHRDEFEDLLRRFVETPTVSVDPAHAGDIQKCLELVVETINNFGGRAEVYHARKGN
Ga0209682_100329892	3300027716	Wetland Sediment	MPRELSRDSLVSFAKNHRAEYEELLKQYVETPTVSVDPGHAQDIDKGVDMVVETFRRFGAKADV
Ga0209177_100246031	3300027775	Agricultural Soil	MSKTLTRDSLLSFANSHRDEYESLLRRFVELPTVSVDPNHLEDIRKGVELTAETI
Ga0268264_100297951	3300028381	Switchgrass Rhizosphere	MPTTLKRDSLLSFANSHRDEFEKLLQRFVETPTVSVDPNHLDDIKKGVELTVETIEGYGG
Ga0268264_123467261	3300028381	Switchgrass Rhizosphere	MPKDLDRDQLFKFANYHRQEYEDLLQRFVETPTVSCDPAHAEDIRKGVDLTVETL
Ga0268240_100563271	3300030496	Soil	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPSHAEDIRKGVDLTVATIEGYGG
Ga0310888_104292461	3300031538	Soil	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPGHAEDIRKGVDLTVSTIEGYG
Ga0310888_107085171	3300031538	Soil	MPTSLSRESLFSYTEDHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGGKADVY
Ga0310887_101107182	3300031547	Soil	MPTSLKRDGLVSFANEHRSEYENLLRRFVETPTVSVDPNHLDDIRKGVELTVETLEGFGGKAEVYRADKG
Ga0307413_103337312	3300031824	Rhizosphere	MPTTLAREKLLSFAAEHREEYESLLRRFVETPTVSVDPNHAEDIKKGVELTVETLEQFGG
Ga0307410_103906632	3300031852	Rhizosphere	MPTTLAREKLLSFAAEHREEYESLLRRFVETPTVSVDPNHAEDIKKGVELTVETLE
Ga0310893_100138451	3300031892	Soil	MPTSLSRESLFSYAKAHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGGKA
Ga0307407_105359352	3300031903	Rhizosphere	MPTTLAREKLLSFAAEHREEYESLLRRFVETPTVSVDPNHAEDIKKGVELTVETL
Ga0310903_100529751	3300032000	Soil	MPTSLSRESLFSYTEDHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGGKADVYG
Ga0310906_114486541	3300032013	Soil	MPTTLKRDSLRAFANEHRQEFEGLLRQFVETPTVSNDPAHLPDIAKGVELTVETIERVGGDARVYKVDKGNPVIHGIFH
Ga0310899_105371441	3300032017	Soil	MPTSLSRESLFSYTEDHRQEYEDLLRRFVETPTVSVDPAHLPDIKKGLELTVETIEKCGG
Ga0307471_1007986482	3300032180	Hardwood Forest Soil	MTLGMTRDQLVSFANSHRDEFEDLLRRFVETPTVSVDPAHLGDIQNCLHLVVETINKFGGRAEVYHAAKGNPT
Ga0307471_1023439941	3300032180	Hardwood Forest Soil	MPTTLKRDSLLSFANSHREEFETLLQRFVETPTVSVDPGHAEDIRKGVDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051957

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences