NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052064

Metagenome / Metatranscriptome Family F052064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052064
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 61 residues
Representative Sequence PYHVALDDVEHGLLSILPVKLKSIETPVGAILRAPGNLPPAAGALLECLRIAARDVPSPRLNR
Number of Associated Samples 119
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.60 %
% of genes from short scaffolds (< 2000 bps) 83.22 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.308 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(42.657 % of family members)
Environment Ontology (ENVO) Unclassified
(44.056 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(45.455 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.36%    β-sheet: 0.00%    Coil/Unstructured: 62.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF13548DUF4126 51.75
PF02274ADI 24.48
PF03466LysR_substrate 10.49
PF00155Aminotran_1_2 4.20
PF14060DUF4252 2.10
PF00535Glycos_transf_2 1.40
PF06155GBBH-like_N 1.40
PF01734Patatin 0.70
PF13489Methyltransf_23 0.70
PF03308MeaB 0.70
PF00534Glycos_transf_1 0.70
PF00924MS_channel 0.70
PF01355HIPIP 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG4874Uncharacterized conserved proteinFunction unknown [S] 24.48
COG1834N-Dimethylarginine dimethylaminohydrolaseAmino acid transport and metabolism [E] 24.48
COG2235Arginine deiminaseAmino acid transport and metabolism [E] 24.48
COG3536Uncharacterized conserved protein, DUF971 familyFunction unknown [S] 1.40
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 0.70
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 0.70
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 0.70
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.70
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.31 %
UnclassifiedrootN/A7.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10108767All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300002909|JGI25388J43891_1042468All Organisms → cellular organisms → Bacteria → Proteobacteria694Open in IMG/M
3300005332|Ga0066388_100490319All Organisms → cellular organisms → Bacteria → Proteobacteria1866Open in IMG/M
3300005434|Ga0070709_11243801All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales599Open in IMG/M
3300005440|Ga0070705_100611685All Organisms → cellular organisms → Bacteria → Proteobacteria844Open in IMG/M
3300005538|Ga0070731_10872484All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300005574|Ga0066694_10271237All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300005764|Ga0066903_106945578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales587Open in IMG/M
3300005764|Ga0066903_108354492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales529Open in IMG/M
3300006086|Ga0075019_11116082All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300006176|Ga0070765_100438357All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300006794|Ga0066658_10847216All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300006797|Ga0066659_10003986All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7125Open in IMG/M
3300006797|Ga0066659_11381803All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300006903|Ga0075426_11005103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales630Open in IMG/M
3300009012|Ga0066710_100032223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6129Open in IMG/M
3300009792|Ga0126374_10330317All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1036Open in IMG/M
3300010048|Ga0126373_11549982All Organisms → cellular organisms → Bacteria → Proteobacteria728Open in IMG/M
3300010048|Ga0126373_12856023All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300010326|Ga0134065_10262963All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300010361|Ga0126378_13002787All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria538Open in IMG/M
3300010366|Ga0126379_11072834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales911Open in IMG/M
3300010376|Ga0126381_100841110All Organisms → cellular organisms → Bacteria → Proteobacteria1319Open in IMG/M
3300012205|Ga0137362_11784827All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300012211|Ga0137377_10466317All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1201Open in IMG/M
3300012362|Ga0137361_11941541All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012925|Ga0137419_10057621All Organisms → cellular organisms → Bacteria2534Open in IMG/M
3300012925|Ga0137419_10169641All Organisms → cellular organisms → Bacteria1592Open in IMG/M
3300012977|Ga0134087_10600351All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300016270|Ga0182036_10136074All Organisms → cellular organisms → Bacteria → Proteobacteria1729Open in IMG/M
3300016270|Ga0182036_11145414All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300016294|Ga0182041_11367218All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria649Open in IMG/M
3300016357|Ga0182032_11349757All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria616Open in IMG/M
3300016371|Ga0182034_11240863All Organisms → cellular organisms → Bacteria → Proteobacteria649Open in IMG/M
3300016445|Ga0182038_10093198All Organisms → cellular organisms → Bacteria2165Open in IMG/M
3300016445|Ga0182038_11575815Not Available590Open in IMG/M
3300016445|Ga0182038_12197672All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria500Open in IMG/M
3300017947|Ga0187785_10098473All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300017959|Ga0187779_10913108All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria605Open in IMG/M
3300017970|Ga0187783_10141123All Organisms → cellular organisms → Bacteria → Proteobacteria1776Open in IMG/M
3300017974|Ga0187777_10015865All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4772Open in IMG/M
3300017993|Ga0187823_10054443All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1108Open in IMG/M
3300017999|Ga0187767_10165079All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300018058|Ga0187766_10315853All Organisms → cellular organisms → Bacteria → Proteobacteria1015Open in IMG/M
3300018085|Ga0187772_10282482All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300018086|Ga0187769_10066341All Organisms → cellular organisms → Bacteria → Proteobacteria2537Open in IMG/M
3300018433|Ga0066667_11232946All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300018482|Ga0066669_10672267Not Available912Open in IMG/M
3300020581|Ga0210399_10038815All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3813Open in IMG/M
3300020582|Ga0210395_10329628All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300021086|Ga0179596_10132999All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300021088|Ga0210404_10600164All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria626Open in IMG/M
3300021178|Ga0210408_10668641All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria819Open in IMG/M
3300021178|Ga0210408_10807604All Organisms → cellular organisms → Bacteria → Proteobacteria734Open in IMG/M
3300021362|Ga0213882_10334241All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria635Open in IMG/M
3300021432|Ga0210384_11639923All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300021477|Ga0210398_10622853All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria876Open in IMG/M
3300021477|Ga0210398_11303997All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria570Open in IMG/M
3300021478|Ga0210402_11818046Not Available535Open in IMG/M
3300021560|Ga0126371_10695588All Organisms → cellular organisms → Bacteria → Proteobacteria1165Open in IMG/M
3300021560|Ga0126371_12300958All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300021560|Ga0126371_13052201Not Available567Open in IMG/M
3300024227|Ga0228598_1024341All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300025898|Ga0207692_10610385All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300025906|Ga0207699_10627041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales784Open in IMG/M
3300025921|Ga0207652_10064938All Organisms → cellular organisms → Bacteria → Proteobacteria3159Open in IMG/M
3300026310|Ga0209239_1160469All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria878Open in IMG/M
3300026524|Ga0209690_1153048All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria841Open in IMG/M
3300027616|Ga0209106_1087670All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300027889|Ga0209380_10097576All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1696Open in IMG/M
3300028906|Ga0308309_10953633All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300029636|Ga0222749_10586708All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300030626|Ga0210291_10879434Not Available546Open in IMG/M
3300031543|Ga0318516_10028352All Organisms → cellular organisms → Bacteria2933Open in IMG/M
3300031545|Ga0318541_10566317All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300031545|Ga0318541_10566562All Organisms → cellular organisms → Bacteria → Proteobacteria635Open in IMG/M
3300031572|Ga0318515_10183425All Organisms → cellular organisms → Bacteria → Proteobacteria1120Open in IMG/M
3300031573|Ga0310915_11024903All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria575Open in IMG/M
3300031640|Ga0318555_10260557All Organisms → cellular organisms → Bacteria → Proteobacteria937Open in IMG/M
3300031681|Ga0318572_10185726All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1210Open in IMG/M
3300031682|Ga0318560_10000295All Organisms → cellular organisms → Bacteria → Proteobacteria13567Open in IMG/M
3300031682|Ga0318560_10415029All Organisms → cellular organisms → Bacteria → Proteobacteria729Open in IMG/M
3300031682|Ga0318560_10730311All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria535Open in IMG/M
3300031720|Ga0307469_10345024All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300031720|Ga0307469_10465534All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1098Open in IMG/M
3300031723|Ga0318493_10052649All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300031723|Ga0318493_10582110All Organisms → cellular organisms → Bacteria → Proteobacteria623Open in IMG/M
3300031724|Ga0318500_10030212All Organisms → cellular organisms → Bacteria2165Open in IMG/M
3300031724|Ga0318500_10313839All Organisms → cellular organisms → Bacteria → Proteobacteria770Open in IMG/M
3300031740|Ga0307468_100023474All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2785Open in IMG/M
3300031744|Ga0306918_11381427Not Available540Open in IMG/M
3300031747|Ga0318502_10003208All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6585Open in IMG/M
3300031751|Ga0318494_10637384All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria623Open in IMG/M
3300031753|Ga0307477_10554907All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria777Open in IMG/M
3300031754|Ga0307475_10503744All Organisms → cellular organisms → Bacteria → Proteobacteria972Open in IMG/M
3300031765|Ga0318554_10004352All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6521Open in IMG/M
3300031770|Ga0318521_10253318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1028Open in IMG/M
3300031770|Ga0318521_10594972All Organisms → cellular organisms → Bacteria → Proteobacteria668Open in IMG/M
3300031771|Ga0318546_10493402All Organisms → cellular organisms → Bacteria → Proteobacteria859Open in IMG/M
3300031778|Ga0318498_10366644All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300031779|Ga0318566_10142613All Organisms → cellular organisms → Bacteria → Proteobacteria1186Open in IMG/M
3300031781|Ga0318547_10638283All Organisms → cellular organisms → Bacteria → Proteobacteria661Open in IMG/M
3300031782|Ga0318552_10357267All Organisms → cellular organisms → Bacteria → Proteobacteria744Open in IMG/M
3300031820|Ga0307473_10184327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1224Open in IMG/M
3300031823|Ga0307478_10127197All Organisms → cellular organisms → Bacteria2003Open in IMG/M
3300031831|Ga0318564_10166397All Organisms → cellular organisms → Bacteria → Proteobacteria984Open in IMG/M
3300031832|Ga0318499_10287266All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300031833|Ga0310917_10183851All Organisms → cellular organisms → Bacteria → Proteobacteria1393Open in IMG/M
3300031833|Ga0310917_10631929All Organisms → cellular organisms → Bacteria → Proteobacteria726Open in IMG/M
3300031835|Ga0318517_10046059All Organisms → cellular organisms → Bacteria → Proteobacteria1814Open in IMG/M
3300031846|Ga0318512_10698253All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria520Open in IMG/M
3300031859|Ga0318527_10290470All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300031890|Ga0306925_10175231All Organisms → cellular organisms → Bacteria2310Open in IMG/M
3300031893|Ga0318536_10180357All Organisms → cellular organisms → Bacteria → Proteobacteria1075Open in IMG/M
3300031894|Ga0318522_10056081All Organisms → cellular organisms → Bacteria → Proteobacteria1401Open in IMG/M
3300031897|Ga0318520_10020353All Organisms → cellular organisms → Bacteria → Proteobacteria3146Open in IMG/M
3300031910|Ga0306923_12300216All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria537Open in IMG/M
3300031946|Ga0310910_10548977All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300031947|Ga0310909_10074440All Organisms → cellular organisms → Bacteria2677Open in IMG/M
3300032008|Ga0318562_10605025All Organisms → cellular organisms → Bacteria → Proteobacteria633Open in IMG/M
3300032039|Ga0318559_10186438All Organisms → cellular organisms → Bacteria → Proteobacteria951Open in IMG/M
3300032039|Ga0318559_10408791All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria633Open in IMG/M
3300032041|Ga0318549_10569079All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria509Open in IMG/M
3300032043|Ga0318556_10099607All Organisms → cellular organisms → Bacteria → Proteobacteria1470Open in IMG/M
3300032044|Ga0318558_10000640All Organisms → cellular organisms → Bacteria → Proteobacteria9584Open in IMG/M
3300032055|Ga0318575_10011559All Organisms → cellular organisms → Bacteria → Proteobacteria3433Open in IMG/M
3300032065|Ga0318513_10524373All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria580Open in IMG/M
3300032066|Ga0318514_10609716All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria581Open in IMG/M
3300032076|Ga0306924_10958431All Organisms → cellular organisms → Bacteria → Proteobacteria942Open in IMG/M
3300032076|Ga0306924_11755252All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300032089|Ga0318525_10019544All Organisms → cellular organisms → Bacteria → Proteobacteria3198Open in IMG/M
3300032091|Ga0318577_10496222Not Available582Open in IMG/M
3300032091|Ga0318577_10614590Not Available516Open in IMG/M
3300032174|Ga0307470_10396967All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria974Open in IMG/M
3300032180|Ga0307471_100777502All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300032180|Ga0307471_100945298All Organisms → cellular organisms → Bacteria → Proteobacteria1029Open in IMG/M
3300032205|Ga0307472_100520617All Organisms → cellular organisms → Bacteria → Proteobacteria1030Open in IMG/M
3300032783|Ga0335079_10187856All Organisms → cellular organisms → Bacteria2299Open in IMG/M
3300032805|Ga0335078_11218273All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria867Open in IMG/M
3300032893|Ga0335069_12165782Not Available582Open in IMG/M
3300033290|Ga0318519_10343233All Organisms → cellular organisms → Bacteria → Proteobacteria881Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil42.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.09%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.29%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.10%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.40%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.40%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.70%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.70%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1010876713300001545Forest SoilLTNRVLLRKSDCIGVMPYHVALDDVEHGLLSILPVKLKSMETPVGAILRAPGNLPPAASALLACLRLAAKDVPSPRKAP*
JGI25388J43891_104246823300002909Grasslands SoilTNRVLLRKSDCIGVMPYHVALDDIEQGLLSILPVKLKSIETPVGAILRAPGELPPAAAALFEYLRLAAKDVPSARL*
Ga0066388_10049031943300005332Tropical Forest SoilMPYHVALDDVEQGLLAILPVKLKSIESPVGVIMRAPGELPPAASAFHGCLRLAAKDVPKPRLSGS*
Ga0070709_1124380113300005434Corn, Switchgrass And Miscanthus RhizosphereVLLRKSDCIGVLPYHVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRI*
Ga0070705_10061168523300005440Corn, Switchgrass And Miscanthus RhizospherePVKLKSIESPVGAILRAPGSLPPAANALLECLRIAARDVPSPRLKR*
Ga0070731_1087248423300005538Surface SoilVLLRKSDCIGVMPYHVALDDVEHQLLAILPVKLKSIESPVGAIMRAPGSLAPAASALLECLRIAARDVRTPRL*
Ga0066694_1027123713300005574SoilMPYHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGTLPPAASALLECLRLAAKDVPSPRL*
Ga0066903_10188176933300005764Tropical Forest SoilVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARAVPSPRLNRP*
Ga0066903_10694557813300005764Tropical Forest SoilVLLRKSDCIGVLPYHVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRN*
Ga0066903_10835449213300005764Tropical Forest SoilYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRP*
Ga0075019_1111608223300006086WatershedsLAMLPVKLKSMNSPVGAILRAPGELPPAAVALLECLRIAARAVPAPKL*
Ga0070765_10043835733300006176SoilLLSILPVKLKSIDSPVGAMLRAPGELPPAASALLECLRIAARDVPSPRL*
Ga0066658_1084721623300006794SoilLRKSDSIGVMPYHVALDDVQHKLLAILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRL*
Ga0066659_1000398673300006797SoilALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRARP*
Ga0066659_1138180323300006797SoilALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRL*
Ga0075426_1100510313300006903Populus RhizosphereVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRI*
Ga0066710_10003222313300009012Grasslands SoilMPYHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRARP
Ga0126374_1033031733300009792Tropical Forest SoilRKSDCIGVLPYHVALDDVEHGLLAILPIKLKSMETPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLNRS*
Ga0126373_1154998213300010048Tropical Forest SoilVEHGLLAILPVKLKSIEGPVGVILRSPGELAPAASAFLECLRTAAQDVPSPRL*
Ga0126373_1285602323300010048Tropical Forest SoilQQELLSILPVKLKSIESPVGAILRAPGNLPPAAGALLECLRIAARDVPSPRLNR*
Ga0134065_1026296313300010326Grasslands SoilIGVMPYHVALDDIEHGLLSILPVKLKSIETPVGAILRSPGELPPAAAALFECLRLAAKDVPSARL*
Ga0126378_1300278713300010361Tropical Forest SoilIGVMPYHVALDDVGHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRP*
Ga0126379_1107283413300010366Tropical Forest SoilRVLLRKSDCIGVLPYHVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRS*
Ga0126381_10084111013300010376Tropical Forest SoilMPYHVALDDVQQELLSILPVKLKSIESPVGAILRAPGLLPPAASALLECLRIAARDVPTPRL*
Ga0137362_1178482713300012205Vadose Zone SoilKSDCIGVMPYHVALDDIEHGLLSILPVKLKSIETPVGAILRSPGELPPAAAALLEYLRLAGKDVPSPRL*
Ga0137377_1046631713300012211Vadose Zone SoilPYHVALDDIEHGLLSILPVKLKSIETPVGAILRAPGELPPAAAALLEYLRLAAKDVPSARL*
Ga0137361_1194154113300012362Vadose Zone SoilPVKLKSIETPVGAILRSPGELPPAAAALLEYLRLAGKDVPSPRL*
Ga0137419_1005762113300012925Vadose Zone SoilKSDSIGVMPYHVALDDVQHKLLAILPVKLKSMETPVGAILRAPGDLPPAATALLECLRLAARDVPSPRERP*
Ga0137419_1016964133300012925Vadose Zone SoilDDVQHKLLAILPVKLKSMETPVGAILRAPGNLPPAASALLDCLRLAAKDVPSPRKAP*
Ga0134087_1060035123300012977Grasslands SoilILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRARP*
Ga0182036_1013607413300016270SoilKSDCIGVMPYHVALDDVEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0182036_1114541423300016270SoilALDDVEHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARAVPSPRLSRS
Ga0182041_1136721813300016294SoilILTNRVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0182032_1134975723300016357SoilGVLPYHVALGDVEHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLSRP
Ga0182034_1124086313300016371SoilLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRR
Ga0182038_1009319813300016445SoilLDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRA
Ga0182038_1157581523300016445SoilILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0182038_1219767223300016445SoilLDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRP
Ga0187785_1009847333300017947Tropical PeatlandALDDVEHGLLAILPVKLKSIESPVGAIVRAPGNLPPAASALLECLRIAARDVPSPRLKR
Ga0187779_1091310813300017959Tropical PeatlandLLRKSDCVGVMPYHVALDDVEQQLLAILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0187783_1014112343300017970Tropical PeatlandLLAILPVKLKSIDSPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0187777_1001586513300017974Tropical PeatlandLLRKSDSIGVLPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARAVPSPRLNHP
Ga0187823_1005444323300017993Freshwater SedimentYHVALDDVEQGLLSILPVKLKSIDSPVGAILRAPGALPPAAAAFLEFLRVAAHEVPKPRL
Ga0187767_1016507923300017999Tropical PeatlandYHVALDDVEQQLLAILPVKLKSIESPVGAILRAPGNLPPAASALLKCLRIAARDVPTPRL
Ga0187766_1031585333300018058Tropical PeatlandLDDVEQGLLAILPVKLKSIESPVGAIFRAPGELPPAATAFLACLRLAAQDVPKPRLAGA
Ga0187772_1028248233300018085Tropical PeatlandALDDVEQGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLDCLRLAGKQVPK
Ga0187769_1006634113300018086Tropical PeatlandPVKLKSIESPVGAILRAPGTLPPAAAALLACLRVAAKDVPTPRL
Ga0066667_1123294623300018433Grasslands SoilLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRARP
Ga0066669_1067226723300018482Grasslands SoilILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDLPSPRPRA
Ga0210399_1003881513300020581SoilLGVMPYHVALDDVEHGLLSILPVKLKALESPVGVIVRAPGELPPAASALRECLRTAAKDVPSPRL
Ga0210395_1032962813300020582SoilQGLLAILPVKLKSIEGPVGAILRAPGTLPPAASALLECLRVVGKQVRK
Ga0179596_1013299933300021086Vadose Zone SoilGVMPYHVALDDVQHKLLAILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRERP
Ga0210404_1060016413300021088SoilPYHVALDDVEHGLLAILPVKLKSIETPVGAILRAPAQLPPAAGALLDCLRVAAKDVPRAK
Ga0210408_1066864113300021178SoilGLLAILPVKLKSIEGPVGAILRAPGTLPPAASALLECLRVVGKQVRK
Ga0210408_1080760423300021178SoilAILPVKLKSIETPVGAILRAPAQLPPAAGALLDCLRVAAKDVPRAKL
Ga0213882_1033424123300021362Exposed RockDVEHGLLAILPVKLPALATPVGAILRAPGELPPAASAFLECLRIAARQVPRPRL
Ga0210384_1163992323300021432SoilGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLDYLRLAGKKVPR
Ga0210398_1062285313300021477SoilHGLLAILPVKLKSIETPVGAILRAPASLPPAANALLEYLRVAARAVPSARL
Ga0210398_1130399723300021477SoilYHVALDDVEHGLLAILPVRLKSIEGPVGAILRAPGELPPAARAFLECLRVAAQDVPRAKL
Ga0210402_1181804613300021478SoilDDVEHGLLAILPVKLKSIESPVGAILRAPAQLPPAAGALLDCLRVAAKDVPRAKL
Ga0126371_1069558823300021560Tropical Forest SoilDDVEQQLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0126371_1230095813300021560Tropical Forest SoilHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRLNRA
Ga0126371_1305220113300021560Tropical Forest SoilHGLLSVLPVKLKSIESPDGAILRAPGNLPPAASALLECLRIAARDVPSPRLTRL
Ga0228598_102434113300024227RhizosphereKTDCVGVMPYHVALDDVELGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLDCLRLAGKKVPT
Ga0207692_1061038513300025898Corn, Switchgrass And Miscanthus RhizosphereVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAAKDV
Ga0207699_1062704113300025906Corn, Switchgrass And Miscanthus RhizosphereLRKSDCIGVLPYHVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRI
Ga0207652_1006493813300025921Corn RhizosphereDDVEHQLLSILPVKLKSIDSPVGAILRAPGALPPAAAALLKFLRLAAHEVPTPRL
Ga0209239_116046913300026310Grasslands SoilDIEQGLLSILPVKLKSIETPVGAILRAPGELPPAAAALFEYLRLAAKDVPSARL
Ga0209690_115304823300026524SoilNRVLLRKSDCIGVMPYHVALDDIEHGLLSILPVKLKSIETPVGAILRAPGELPPAAAALFEYLRLAAKDVPSARL
Ga0209106_108767023300027616Forest SoilNRMLLRKSDSIGVMPYHVALDDVQHKLLAILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAARDVPSPRERP
Ga0209380_1009757643300027889SoilRVLLRKSDCIGVMPYHVARDDVQQKLLAILPVKLKSMDSPVGAILRAPGALPPAATALLECLRLAARSVPAPRL
Ga0308309_1095363313300028906SoilNRVLLRRSDCIGVMPYHVALDDVEHKLLSILPVKLKSIDSPVGAMLRAPGELPPAASALLECLRIAARDVPSPRL
Ga0222749_1058670813300029636SoilHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAASALLEYLRLAAKDVPSPKAP
Ga0210291_1087943423300030626SoilLLAILPVKLKSLEGPVGVIVRAPGDLPPAASALRECLRAAAKDVPSPRL
Ga0318516_1002835213300031543SoilMPYHVSLDDVEHGLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRR
Ga0318534_1022229633300031544SoilPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0318541_1056631723300031545SoilHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARAVPSPRLNRA
Ga0318541_1056656223300031545SoilILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRT
Ga0318515_1018342513300031572SoilVMPYHVALDDVEHGLLAILPVKLKSIESPVGAILRAPGTLPQAASALLECLRVAAREVPSPRLNRR
Ga0310915_1102490323300031573SoilDDVEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0318555_1026055733300031640SoilEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0318572_1018572633300031681SoilVLLRKSDCIGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318560_10000295163300031682SoilLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318560_1041502923300031682SoilLTNRVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0318560_1073031113300031682SoilSGRMLALDDVEHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARAVPSPRLNRA
Ga0307469_1034502433300031720Hardwood Forest SoilIGVMPYHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAATALLECLRLAAKDVPSPRERP
Ga0307469_1046553413300031720Hardwood Forest SoilKSDCIGVMPYHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAAKALLECLRLAAKDVPSPRERP
Ga0318493_1005264943300031723SoilKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRA
Ga0318493_1058211023300031723SoilSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARQVPSPRLNRP
Ga0318500_1003021213300031724SoilLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0318500_1031383913300031724SoilLLAILPVKLKSIESPVGAILRAPGTLPPAASALLECLRVAAREVPSPRLNRR
Ga0307468_10002347413300031740Hardwood Forest SoilEHELLSILPVKLKSIDSPVGAILRAPGALPPAAAALLECLRLAAHEVPTPRL
Ga0306918_1138142713300031744SoilLLAILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0318502_1000320893300031747SoilRVLLRKSDCIGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318494_1063738413300031751SoilIGVMPYHVALDDVEQQLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0307477_1055490723300031753Hardwood Forest SoilMPYHVALDDVEQGLLAILPVKLKSIESPVGAILRAPGTLPPAAAALLDYLRLAGKGAPT
Ga0307475_1050374433300031754Hardwood Forest SoilRKSDCIGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318554_1000435293300031765SoilTDCIGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318521_1025331833300031770SoilRVLLRKSDCIGVLPYHVALDDVEHGLLAILPVKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRT
Ga0318521_1059497223300031770SoilVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0318546_1049340213300031771SoilPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAARQVPSPRLNRP
Ga0318498_1036664413300031778SoilPYHVALDDVEHGLLSILPVKLKSIETPVGAILRAPGNLPPAAGALLECLRIAARDVPSPRLNR
Ga0318566_1014261313300031779SoilSDCIGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318547_1063828323300031781SoilDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRT
Ga0318552_1035726723300031782SoilGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0307473_1018432713300031820Hardwood Forest SoilRVLLRKSDCIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLNRV
Ga0307478_1012719733300031823Hardwood Forest SoilDSIGVMPYHVALDDVQHRLLAILPVKLKSMETPVGAILRAPGNLPPAAAALLECLRLAARDVPSPRERP
Ga0318564_1016639713300031831SoilPYHVALDDVEQQLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPR
Ga0318499_1028726613300031832SoilVEHGLLAILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0310917_1018385133300031833SoilGLLAILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0310917_1063192913300031833SoilRVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRA
Ga0318517_1004605943300031835SoilGVLPYHVALDDVEHGLLAILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0318512_1069825323300031846SoilPYHVALDDVEHGLLAILPVKLKSIDSPVGAILRAPGTLPPAANALLECLRVAAREVPSPRLNRR
Ga0318527_1029047023300031859SoilLAILPVKLKSIESPVGAILRAPGKLPPAASALLECLRIAAREVPSPRLNRP
Ga0306925_1017523113300031890SoilGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAAREVPSPRLHR
Ga0318536_1018035723300031893SoilVALDDVEHGLLSVLPVKLKSVESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLNR
Ga0318522_1005608133300031894SoilTNRVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRA
Ga0318520_1002035313300031897SoilPYHVALDDVEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0306923_1230021613300031910SoilYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRP
Ga0310910_1054897723300031946SoilKSDCIGVMPYHVALDDVEQQLLSILPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPTPRL
Ga0310909_1007444043300031947SoilMPYHVALDDVEHGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLECLRVAAREVPSPRLNRR
Ga0318562_1060502523300032008SoilMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRP
Ga0318559_1018643833300032039SoilGVLPYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318559_1040879113300032039SoilAVMPYHVALDDVEHGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLECLRVAAREVPSPRLNRR
Ga0318549_1056907913300032041SoilYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0318556_1009960733300032043SoilLPYHVALDDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRT
Ga0318558_10000640113300032044SoilYHVALDDVEHGLLSVLPVKLKSIESPVGAILRAPGNLPPAASALLECLRIAARDVPSPRLSRS
Ga0318575_1001155913300032055SoilVEHGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLECLRVAAREVPSPRLNRR
Ga0318513_1052437313300032065SoilRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0318514_1060971623300032066SoilSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAACEVPSPRLNRR
Ga0306924_1095843123300032076SoilDVEHGLLAILPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRT
Ga0306924_1175525223300032076SoilVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRP
Ga0318525_1001954413300032089SoilHVALDDVEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0318577_1049622223300032091SoilVEHGLLSILPVKIKSIESPVGAILRAPGNLPPAASALLESLRIAARDVPSPRLNRL
Ga0318577_1061459023300032091SoilAILPVKLKSIESPVGAILRAPGTLPPAASALLECLRVAAREVPSPRLNRR
Ga0307470_1039696713300032174Hardwood Forest SoilDCIGVMPYHVALDDVEHKLLSILPVKLKSMETPVGAILRAPGNLPPAAKALLECLRLAAKDVPSPRERP
Ga0307471_10077750223300032180Hardwood Forest SoilLLSILPVKLKSIDCPVGAILRAPGALPPAAAALLECLRLAAHEVPTPRL
Ga0307471_10094529813300032180Hardwood Forest SoilSILPVKLKSIESPVGAILRAPGNLPPAASGLLECLRIAARDVPSPRLNRV
Ga0307472_10052061713300032205Hardwood Forest SoilPIKLKSMESPVGAIMRAPGNLPPAASALLECLRIAARDVPSPRLNRI
Ga0335079_1018785643300032783SoilLLAILPVKLKSIETPVGAILRAPAQLPPAAGAFLECLRAAAKDVPRARL
Ga0335078_1121827313300032805SoilYHVALDDVEQGLLAILPVKLKSIESPVGAILRAPGTLPPAASALLDCLRLAGKQVPK
Ga0335069_1216578213300032893SoilSDLIGVMPYHVALDDVEQGLLAILPVKLKSIETPVGAILRAPGKLPPAAAALLDCLRLAGRDVPT
Ga0318519_1034323323300033290SoilILTNRVLLRKSDSIGVMPYHVALDDVEHGLLSILPVKLKSIESPVGAILRAPGTLPPAASALLECLRIAARAVPSPRRHRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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