Metagenome / Metatranscriptome Family F052086

Basic Information
Family ID	F052086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	39 residues
Representative Sequence	RAVECATITYDQLKAGAMPAGAARVRRLPAIVGQPALAG
Number of Associated Samples	97
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.61 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (53.846 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (43.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.035 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 0.00% Coil/Unstructured: 86.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00239	Resolvase	2.80
PF08281	Sigma70_r4_2	2.10
PF13975	gag-asp_proteas	2.10
PF12762	DDE_Tnp_IS1595	2.10
PF12760	Zn_Tnp_IS1595	2.10
PF00535	Glycos_transf_2	1.40
PF13414	TPR_11	1.40
PF04964	Flp_Fap	1.40
PF02796	HTH_7	1.40
PF13356	Arm-DNA-bind_3	0.70
PF00072	Response_reg	0.70
PF01420	Methylase_S	0.70
PF02567	PhzC-PhzF	0.70
PF13432	TPR_16	0.70
PF00571	CBS	0.70
PF00353	HemolysinCabind	0.70
PF01042	Ribonuc_L-PSP	0.70
PF13545	HTH_Crp_2	0.70
PF00205	TPP_enzyme_M	0.70
PF04966	OprB	0.70
PF13701	DDE_Tnp_1_4	0.70
PF05050	Methyltransf_21	0.70
PF12631	MnmE_helical	0.70
PF08818	DUF1801	0.70
PF00589	Phage_integrase	0.70
PF03235	DUF262	0.70
PF02668	TauD	0.70
PF13692	Glyco_trans_1_4	0.70
PF01939	NucS	0.70
PF01526	DDE_Tnp_Tn3	0.70
PF00685	Sulfotransfer_1	0.70
PF07769	PsiF_repeat	0.70
PF13480	Acetyltransf_6	0.70
PF13676	TIR_2	0.70
PF07690	MFS_1	0.70
PF04116	FA_hydroxylase	0.70
PF12708	Pectate_lyase_3	0.70
PF13433	Peripla_BP_5	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.80
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.80
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.40
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.70
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.70
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.70
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.70
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.70
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.70
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.70
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.70
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.70
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
All Organisms	root	All Organisms	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
cellular organisms	root	All Organisms → cellular organisms	45.45 %
Viruses	superkingdom	All Organisms → Viruses	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.45 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.40 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.48 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.40 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.90 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.70 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.70 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.40 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.40 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.40 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.70 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.70 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.70 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.70 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.70 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.70 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.70 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.70 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.70 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.70 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.40 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.70 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.70 %
unclassified Acidocella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
Azospirillum thermophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum thermophilum	0.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.70 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.70 %
Azospirillum soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum soli	0.70 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.70 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.40 %
Rhodanobacter sp. C03	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C03	0.70 %
Acidocella sp. 20-61-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. 20-61-6	0.70 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.70 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.70 %
Azospirillum thermophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum thermophilum	0.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.70 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.70 %
Azospirillum soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum soli	0.70 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.70 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.70 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_110102301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. 20-61-6	793	Open in IMG/M
3300003505\|JGIcombinedJ51221_10095045	Not Available	1181	Open in IMG/M
3300003505\|JGIcombinedJ51221_10131621	Not Available	1006	Open in IMG/M
3300004080\|Ga0062385_10573601	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300004091\|Ga0062387_100010062	All Organisms → cellular organisms → Bacteria → Proteobacteria	3442	Open in IMG/M
3300004633\|Ga0066395_10744038	Not Available	585	Open in IMG/M
3300005179\|Ga0066684_11120065	Not Available	503	Open in IMG/M
3300005332\|Ga0066388_101750690	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005602\|Ga0070762_10389783	Not Available	895	Open in IMG/M
3300005764\|Ga0066903_107797243	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006032\|Ga0066696_10215632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300006175\|Ga0070712_101149057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	675	Open in IMG/M
3300006175\|Ga0070712_101591770	Not Available	571	Open in IMG/M
3300006176\|Ga0070765_100939718	Not Available	817	Open in IMG/M
3300010046\|Ga0126384_11494134	Not Available	633	Open in IMG/M
3300010360\|Ga0126372_11185975	Not Available	787	Open in IMG/M
3300010361\|Ga0126378_11565147	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300010376\|Ga0126381_100083054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	4037	Open in IMG/M
3300010376\|Ga0126381_101456518	Not Available	990	Open in IMG/M
3300010376\|Ga0126381_101801404	Not Available	884	Open in IMG/M
3300012199\|Ga0137383_10881364	Not Available	653	Open in IMG/M
3300012205\|Ga0137362_10410226	Not Available	1173	Open in IMG/M
3300012206\|Ga0137380_10949469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum thermophilum	737	Open in IMG/M
3300012207\|Ga0137381_10163168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1921	Open in IMG/M
3300012209\|Ga0137379_10460732	All Organisms → cellular organisms → Bacteria → Proteobacteria	1180	Open in IMG/M
3300012212\|Ga0150985_123034847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1066	Open in IMG/M
3300012361\|Ga0137360_11038872	Not Available	707	Open in IMG/M
3300012362\|Ga0137361_10258288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1588	Open in IMG/M
3300012362\|Ga0137361_10658761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	958	Open in IMG/M
3300012363\|Ga0137390_11782948	Not Available	547	Open in IMG/M
3300012582\|Ga0137358_10464396	Not Available	854	Open in IMG/M
3300012948\|Ga0126375_10224571	Not Available	1252	Open in IMG/M
3300014658\|Ga0181519_10000403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40172	Open in IMG/M
3300014658\|Ga0181519_10403453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum soli	844	Open in IMG/M
3300016294\|Ga0182041_10806965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	839	Open in IMG/M
3300016341\|Ga0182035_11058683	Not Available	721	Open in IMG/M
3300016341\|Ga0182035_11168015	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300016341\|Ga0182035_11417492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300016341\|Ga0182035_11536177	Not Available	599	Open in IMG/M
3300016357\|Ga0182032_10819602	Not Available	787	Open in IMG/M
3300016357\|Ga0182032_11517762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	582	Open in IMG/M
3300016357\|Ga0182032_11758460	Not Available	541	Open in IMG/M
3300016371\|Ga0182034_10130888	Not Available	1854	Open in IMG/M
3300016371\|Ga0182034_11789309	Not Available	541	Open in IMG/M
3300016387\|Ga0182040_10249700	Not Available	1332	Open in IMG/M
3300016387\|Ga0182040_10660181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	852	Open in IMG/M
3300016404\|Ga0182037_10437681	Not Available	1085	Open in IMG/M
3300016404\|Ga0182037_11833153	Not Available	542	Open in IMG/M
3300016445\|Ga0182038_10474002	Not Available	1063	Open in IMG/M
3300018433\|Ga0066667_10365349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300019242\|Ga0181502_1519261	Not Available	754	Open in IMG/M
3300020579\|Ga0210407_10040282	All Organisms → cellular organisms → Bacteria	3475	Open in IMG/M
3300020579\|Ga0210407_10096232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2245	Open in IMG/M
3300020579\|Ga0210407_10585550	Not Available	870	Open in IMG/M
3300020580\|Ga0210403_10309327	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300020580\|Ga0210403_10656540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	843	Open in IMG/M
3300020581\|Ga0210399_10837631	Not Available	749	Open in IMG/M
3300020583\|Ga0210401_10397957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300021168\|Ga0210406_10446532	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300021171\|Ga0210405_10030091	All Organisms → cellular organisms → Bacteria	4354	Open in IMG/M
3300021171\|Ga0210405_10074826	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300021171\|Ga0210405_10802203	Not Available	721	Open in IMG/M
3300021171\|Ga0210405_10908703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300021178\|Ga0210408_10094403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2349	Open in IMG/M
3300021178\|Ga0210408_10096500	All Organisms → cellular organisms → Bacteria → Proteobacteria	2322	Open in IMG/M
3300021178\|Ga0210408_10583872	Not Available	886	Open in IMG/M
3300021178\|Ga0210408_10729409	Not Available	779	Open in IMG/M
3300021180\|Ga0210396_10230431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1649	Open in IMG/M
3300021401\|Ga0210393_11222655	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021405\|Ga0210387_11571610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300021405\|Ga0210387_11685765	Not Available	537	Open in IMG/M
3300021420\|Ga0210394_11238886	Not Available	639	Open in IMG/M
3300021432\|Ga0210384_10327553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1379	Open in IMG/M
3300021444\|Ga0213878_10237407	Not Available	773	Open in IMG/M
3300021478\|Ga0210402_11036796	Not Available	747	Open in IMG/M
3300021478\|Ga0210402_11403841	Not Available	625	Open in IMG/M
3300021479\|Ga0210410_11657566	Not Available	533	Open in IMG/M
3300021559\|Ga0210409_10678531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	901	Open in IMG/M
3300021560\|Ga0126371_10187797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2155	Open in IMG/M
3300021560\|Ga0126371_10408666	Not Available	1500	Open in IMG/M
3300021560\|Ga0126371_12968642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	574	Open in IMG/M
3300021560\|Ga0126371_13477888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300026489\|Ga0257160_1105327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300026550\|Ga0209474_10190344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300026551\|Ga0209648_10398555	Not Available	905	Open in IMG/M
3300026551\|Ga0209648_10767200	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	526	Open in IMG/M
3300026999\|Ga0207949_1002073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1714	Open in IMG/M
3300027173\|Ga0208097_1010589	Not Available	1002	Open in IMG/M
3300027537\|Ga0209419_1129465	Not Available	504	Open in IMG/M
3300027812\|Ga0209656_10241930	Not Available	857	Open in IMG/M
3300027884\|Ga0209275_10247962	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300027889\|Ga0209380_10172445	Not Available	1267	Open in IMG/M
3300031057\|Ga0170834_111270196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031446\|Ga0170820_16298754	Not Available	612	Open in IMG/M
3300031545\|Ga0318541_10279057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300031545\|Ga0318541_10372823	Not Available	797	Open in IMG/M
3300031545\|Ga0318541_10699203	Not Available	566	Open in IMG/M
3300031561\|Ga0318528_10640902	Not Available	569	Open in IMG/M
3300031573\|Ga0310915_10208793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1367	Open in IMG/M
3300031679\|Ga0318561_10259474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	948	Open in IMG/M
3300031680\|Ga0318574_10588562	Not Available	652	Open in IMG/M
3300031681\|Ga0318572_10570711	Not Available	674	Open in IMG/M
3300031681\|Ga0318572_10607243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300031719\|Ga0306917_10329001	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031719\|Ga0306917_11200912	Not Available	589	Open in IMG/M
3300031754\|Ga0307475_10192406	Not Available	1629	Open in IMG/M
3300031768\|Ga0318509_10717807	Not Available	554	Open in IMG/M
3300031770\|Ga0318521_10160963	Not Available	1279	Open in IMG/M
3300031771\|Ga0318546_10750432	Not Available	687	Open in IMG/M
3300031771\|Ga0318546_10825519	Not Available	652	Open in IMG/M
3300031777\|Ga0318543_10323375	Not Available	690	Open in IMG/M
3300031796\|Ga0318576_10525000	Not Available	558	Open in IMG/M
3300031797\|Ga0318550_10663212	Not Available	500	Open in IMG/M
3300031805\|Ga0318497_10042949	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300031890\|Ga0306925_10402181	Not Available	1467	Open in IMG/M
3300031890\|Ga0306925_11301742	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031893\|Ga0318536_10415407	Not Available	679	Open in IMG/M
3300031910\|Ga0306923_10958613	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300031912\|Ga0306921_10821778	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031912\|Ga0306921_11988208	Not Available	619	Open in IMG/M
3300031941\|Ga0310912_10492338	Not Available	956	Open in IMG/M
3300031942\|Ga0310916_10521052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300031942\|Ga0310916_11477964	Not Available	555	Open in IMG/M
3300031945\|Ga0310913_10338480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300031947\|Ga0310909_11377892	Not Available	565	Open in IMG/M
3300031947\|Ga0310909_11420490	Not Available	555	Open in IMG/M
3300031954\|Ga0306926_11124377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C03	927	Open in IMG/M
3300031954\|Ga0306926_12000859	Not Available	651	Open in IMG/M
3300031962\|Ga0307479_10326389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1517	Open in IMG/M
3300032001\|Ga0306922_10685091	Not Available	1080	Open in IMG/M
3300032001\|Ga0306922_12034865	Not Available	558	Open in IMG/M
3300032035\|Ga0310911_10198155	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300032043\|Ga0318556_10389439	Not Available	729	Open in IMG/M
3300032065\|Ga0318513_10199992	Not Available	963	Open in IMG/M
3300032076\|Ga0306924_10245407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2056	Open in IMG/M
3300032076\|Ga0306924_11146751	Not Available	844	Open in IMG/M
3300032076\|Ga0306924_11795729	Not Available	639	Open in IMG/M
3300032076\|Ga0306924_11850510	Not Available	627	Open in IMG/M
3300032076\|Ga0306924_12590998	Not Available	506	Open in IMG/M
3300032261\|Ga0306920_100900868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1293	Open in IMG/M
3300032261\|Ga0306920_101495326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300032261\|Ga0306920_102271064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300033290\|Ga0318519_10807281	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.41%
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.41%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Marine	Environmental → Aquatic → Marine	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.40%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.70%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1101023011	3300001213	Wetland	LIRRAVECATITYDQIVAGDMDGGATRNRRILLPVVDCLP*
JGIcombinedJ51221_100950453	3300003505	Forest Soil	LIRRAVECATITYDQLTAGVMPAGAARVRRLPATVVQPALAG*
JGIcombinedJ51221_101316211	3300003505	Forest Soil	LIRRAVECATITYDQLTAGVMPAGAARVRRLPAMVVQPALAG*
Ga0062385_105736011	3300004080	Bog Forest Soil	RAVECATITYDQLKTGAMPAGASRVRRLPAEIVQPALAR*
Ga0062387_1000100621	3300004091	Bog Forest Soil	LIRRAIECTTITYDQLKSGALPSGASRVRRVPATVGQPVLAG*
Ga0066395_107440381	3300004633	Tropical Forest Soil	LIRRAVECATITYDQLKAGAISTGASRVRRLPVMVGQPALA*
Ga0066684_111200651	3300005179	Soil	IRRAVECATITYDQLTAGTMPGGANRVRRLPVEVAQPALAR*
Ga0066388_1017506903	3300005332	Tropical Forest Soil	RRAVECATITYDQLKAGAMPAGAARVRRLPAIVGQPALAG*
Ga0070762_103897833	3300005602	Soil	VECATITYDQLTAGVMPAGAARVRRLPATVVQPALAG*
Ga0066903_1077972431	3300005764	Tropical Forest Soil	VECATITYDQLKAGAMPAGAARVRRLPAIVGQPALAG*
Ga0066696_102156323	3300006032	Soil	AVECATVTYDQLKAGNLPDGAERIRRLPAAVAEPALAG*
Ga0070712_1011490571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DGYLIRRAVECATITYDQLRAGTMPGGANRIRRPPAAVAEPALAG*
Ga0070712_1015917701	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ECATITYDQLKTGTLPGGANRVRRLPAAVAQPALAG*
Ga0070765_1009397181	3300006176	Soil	ATITYDQLTAGVMPAGAARVRRLPATVVQPALAG*
Ga0126384_114941342	3300010046	Tropical Forest Soil	DRYLIRRAVECATITYDQLTAGLTPAGAARLRRLPATVGQPALAG*
Ga0126372_111859751	3300010360	Tropical Forest Soil	LIRRAVECATITYDQLKTATMPGGANRIRRPRAALAEPALAG*
Ga0126378_115651471	3300010361	Tropical Forest Soil	ATITYDQLTAGVMPAGAARVRRLPATVGLPALAR*
Ga0126381_1000830549	3300010376	Tropical Forest Soil	VECATITYDQLTAGVMPAGAARVRRFPATVGQPALAG*
Ga0126381_1014565183	3300010376	Tropical Forest Soil	VQCATITFDQLKAGAMPAGAARVRRLPATVGQPALAG*
Ga0126381_1018014041	3300010376	Tropical Forest Soil	AVQCATITFDQLKAGAMPAGAARVRRLPATVGQPALAG*
Ga0137383_108813641	3300012199	Vadose Zone Soil	VECATITYDQLTAGTMPGGANRVRRPPAAVAEPALAG*
Ga0137362_104102261	3300012205	Vadose Zone Soil	AVECATITFDQLTTGTLPGGANRVRRLPAAVAQPALAG*
Ga0137380_109494691	3300012206	Vadose Zone Soil	AVECATITYDQLTAGTMPGGANRVRRPPAAVAEPALAG*
Ga0137381_101631685	3300012207	Vadose Zone Soil	AVECATITYDQLKTGTLPGGANRVRRLPVAVAQPALAR*
Ga0137379_104607322	3300012209	Vadose Zone Soil	AVECATITYDQLTAGTMPGGANRVRRPPAAVAEPALAA*
Ga0150985_1230348472	3300012212	Avena Fatua Rhizosphere	VECATITYDQLKAGTMPSGANRIRRLPAEVAQPALA*
Ga0137360_110388722	3300012361	Vadose Zone Soil	CATITYDQLTAGVMPAGAARVRRLPATVGLPALAG*
Ga0137361_102582883	3300012362	Vadose Zone Soil	AVECATITYDQLKKGTLPGGANRVRRLPAAVAQPALAG*
Ga0137361_106587611	3300012362	Vadose Zone Soil	ECATITYDQLKKGTLPGGANRVRRLPAAVAQPALAG*
Ga0137390_117829481	3300012363	Vadose Zone Soil	VECATITYDQLKTGTLPGGANRVRRLPAAVAQPALAR*
Ga0137358_104643961	3300012582	Vadose Zone Soil	ECATITYDQLKAGAIPTGASRVRRLPVMVGQPALA*
Ga0126375_102245711	3300012948	Tropical Forest Soil	RRAVECTTITYDQLTVGDTPAGAARVRRLPATVGEPALAG*
Ga0181519_100004031	3300014658	Bog	AVECATITYDQLTAGTMAAGATRQRRPFSKVVEPALAG*
Ga0181519_104034531	3300014658	Bog	VECATITYDQLTAGTMAAGATRQRRPFSKVVEPALAG*
Ga0182041_108069652	3300016294	Soil	YLIRRAVECATITYDQLKAGVIPAGANRVRRLPVMVGQGKPVLA
Ga0182035_110586831	3300016341	Soil	GLDRYLIRRAVECATITHDQLTAGLLLAGAARVRRLPATVG
Ga0182035_111680151	3300016341	Soil	GLDRYLIRRAVECATITHDQLTAGLLLAGAARVRRLPATVGQPASAG
Ga0182035_114174921	3300016341	Soil	LDRYLIRRAVECATITYDQLTASLMPAGATRIRRLPATVGRPALA
Ga0182035_115361771	3300016341	Soil	LDRYLIRRAVECATITYDQLTAGAMRVRRLLAAVGEPALAG
Ga0182032_108196021	3300016357	Soil	AVECATITYDQLKAGTMPAGAGRVRRLPATVGQPASAG
Ga0182032_115177621	3300016357	Soil	VECATITYDQLTAGAMPAGAARVHRPPATVGRPALAG
Ga0182032_117584602	3300016357	Soil	AVECATITYDQLKAGAMPVGAARVRRLPAIVGQPALAG
Ga0182034_101308881	3300016371	Soil	GYLIRRAVECATITYNQLKAGIMPDGANRGRRVATEVVQPALAR
Ga0182034_117893091	3300016371	Soil	EYATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0182040_102497002	3300016387	Soil	GYLIRRAVECATITYDQLKTATMPSGANRIRRPRAAVAEPALAG
Ga0182040_106601811	3300016387	Soil	LDRYLIRRAVECATITYDQLTAGAMPAGAARVHRPPATVGRPALAG
Ga0182037_104376812	3300016404	Soil	AVECATITYDQLKAGAIPSGASRVRRLPVMVGQPALA
Ga0182037_118331532	3300016404	Soil	AVECATITYDQLKTATMPGGANRIRRPRAAVAEPALAG
Ga0182038_104740022	3300016445	Soil	VECATITYDQLKAGAIPSGASRVRRLPVMVGQPALA
Ga0066667_103653491	3300018433	Grasslands Soil	RRAVECATVTYDQLKAGNLPDGAERIRRRPAAVAEPALAG
Ga0181502_15192611	3300019242	Peatland	CATITYDQLTAGTMAAGATRQRRPFSKVVEPALAG
Ga0210407_100402824	3300020579	Soil	LIRRAVECATITYDQLKTGTLLGGANRVRRLPATVAQPALAG
Ga0210407_100962321	3300020579	Soil	RAVECATITYDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0210407_105855504	3300020579	Soil	CATITSDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0210403_103093272	3300020580	Soil	ECATITYDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0210403_106565402	3300020580	Soil	AVECATITYDQLKTGTLLGGANRVRRLPAAVAQPALAG
Ga0210399_108376312	3300020581	Soil	RAVECTTITYDQLKTGTMPGGAHRIRRPPAAVAQPALAG
Ga0210401_103979571	3300020583	Soil	PDRYLIRRAVECATITYDQLTAGVMPAGAARVRHLPATVVQPALAR
Ga0210406_104465323	3300021168	Soil	AVECATITYDQLKTGTLLGGANRVRRLPAAIAQPALAG
Ga0210405_100300911	3300021171	Soil	YLIRRAVECATITYDQLKTGTLLGGANRVRRLPATVAQPALAG
Ga0210405_100748261	3300021171	Soil	LIRRAVECATITYDQLTAGVMPAGAARVRRLPATVAQPALAG
Ga0210405_108022031	3300021171	Soil	VECATITYDQLKTGTLLGGANRVRRLPAAIAQPALAG
Ga0210405_109087031	3300021171	Soil	ECATITYDQLKTGTLLGGANRVRRLPAAVAQPALAR
Ga0210408_100944031	3300021178	Soil	LIRRSVECTTITYDQLTAGDTPAGAARVRRLPATVGEPALAG
Ga0210408_100965004	3300021178	Soil	CATITYDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0210408_105838721	3300021178	Soil	ECATITYDQLKTGTLLGGANRVRRLPAAVAQPALAG
Ga0210408_107294092	3300021178	Soil	RAVECATITYDQLKTGTLLGGANRVRRLPAAIAQPALAG
Ga0210396_102304315	3300021180	Soil	CATITYDQLTAGAMPAGAARVRRLPATVGLPALAG
Ga0210393_112226551	3300021401	Soil	RAVECTTITYDQLKTGTLLGGANRVRRLPAAVAQPALAR
Ga0210387_115716102	3300021405	Soil	GYLIRRAVGCATITYDQLKAGTLTGGANRVRRLPATVA
Ga0210387_116857651	3300021405	Soil	AVECATITYDQLKTGTLPGSAHRVRRLPAAVAQPALAG
Ga0210394_112388861	3300021420	Soil	RAVECATITYAQLTAGIMPSGANRIRRLPATVAQSALAG
Ga0210384_103275531	3300021432	Soil	AVECATITYDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0213878_102374071	3300021444	Bulk Soil	RAVECATITYDQLKAGAMPAGAARVRRLPAIVGQPALAG
Ga0210402_110367963	3300021478	Soil	RAVECATITYDQLTAGVMPVGAARVRRLPATVGQPALAG
Ga0210402_114038412	3300021478	Soil	VECATITYDQLKTGTLPGGAHRVRRLPAAVAQPALAG
Ga0210410_116575662	3300021479	Soil	APLKCATITYDQLKTGTLPGGANRVRRLPAAVAQPALAG
Ga0210409_106785311	3300021559	Soil	YLIRRAVECATITYDQLTAGVMPAGAARVRRLPATVVQPALAGYG
Ga0126371_101877975	3300021560	Tropical Forest Soil	AVQCATITFDQLKAGAMPAGAARVRRLPATVGQPALAG
Ga0126371_104086661	3300021560	Tropical Forest Soil	ECATITYDQLKAGAMPAGAARVRRLPAIVGQPALAG
Ga0126371_129686422	3300021560	Tropical Forest Soil	VECATITYNQLKAGAMPTGASRFRRLPVMVGQPALA
Ga0126371_134778882	3300021560	Tropical Forest Soil	AVECATITYDQLKTGAMLAGAARVRRLPATVGQPASAG
Ga0257160_11053271	3300026489	Soil	AVECATITYDQLKTGTLPGGANRVRRLPAAVAQPALAG
Ga0209474_101903441	3300026550	Soil	AVECATVTYDQLKAGNLPDGAERIRRLPAAVAEPALAG
Ga0209648_103985553	3300026551	Grasslands Soil	AVECATITYDQLKTGTLPGGANRVRRLPAEVVQPALAR
Ga0209648_107672002	3300026551	Grasslands Soil	AVECATITYDQLKTGTLPGGANRVRRLPAAVAQPALAR
Ga0207949_10020735	3300026999	Forest Soil	IRRAVECATITYDQLTAGVMPAGAARVRDLPAIVVQPALAG
Ga0208097_10105892	3300027173	Forest Soil	IRRAVECATITYDQLTAGVMPAGAARVRRLPAMVVQPALAG
Ga0209419_11294651	3300027537	Forest Soil	AVECATITYDQLKTGAMPGGANRVRRPPAAVAQPALAR
Ga0209656_102419303	3300027812	Bog Forest Soil	AVECATITYDQLKAGAIPTGASRVHRLPVMVGKPALA
Ga0209275_102479621	3300027884	Soil	CATITYDQLTAGVMPAGAARVRRLPATVVQPALAG
Ga0209380_101724453	3300027889	Soil	IRRAVECATITYDQLTAGVMPAGAARVRRLPATVVQPALAG
Ga0170834_1112701961	3300031057	Forest Soil	VECTTITYDQLKTGTLPGGANRVRRLPAAVAQPALAG
Ga0170820_162987542	3300031446	Forest Soil	YLIRRAVECATITYDQLKTGTLLGGANRVRRLPAAVAQPALAG
Ga0318541_102790573	3300031545	Soil	LIRRAVECATITYDQLTAGTMPTGAARVRRLPLQSGNLL
Ga0318541_103728232	3300031545	Soil	IAILIRPAVECATITYDQLKAGTMPAGAGRVRRLPATVGQPASAG
Ga0318541_106992031	3300031545	Soil	RAVECATITYDQLKTATMPGGANRIRRPRAAVAEPALAG
Ga0318528_106409021	3300031561	Soil	VECATITYDQLKAGVIPAGATRVRRLPVMVGQGNLF
Ga0310915_102087931	3300031573	Soil	AVECATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0318561_102594741	3300031679	Soil	RAVECASITYDQLTAGDMLAGGARVRRLPAKVGEPALAR
Ga0318574_105885621	3300031680	Soil	RAVECATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0318572_105707111	3300031681	Soil	IRRAVECASITYDQLTAGDMLAGGARVRRLPAKVGEPALAR
Ga0318572_106072431	3300031681	Soil	YLIRRAVECATITYDQLKAGAISTGASRVRRLPVMVGQPALAR
Ga0306917_103290013	3300031719	Soil	RAVECATITYDQLKAGAMPVGAARVRRLPAIVGQPALAG
Ga0306917_112009121	3300031719	Soil	ECATITYDQLTASLMPAGATRIRRLPVTVWRPALA
Ga0307475_101924063	3300031754	Hardwood Forest Soil	AVECATITYDQLTAGVMPAGAARVRRLPAIVVQPALAG
Ga0318509_107178071	3300031768	Soil	ECATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0318521_101609631	3300031770	Soil	AVECATITYNQLKAGIMPDGANRVRRVATEVVQPALAR
Ga0318546_107504321	3300031771	Soil	VECATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0318546_108255193	3300031771	Soil	RAVECATITYDQLKAGAIPSGAPRVRRLPVMVGQPALA
Ga0318543_103233751	3300031777	Soil	RRAVECATITYDQLTAGAMPAGAARVHRPPATVGQPALAG
Ga0318576_105250001	3300031796	Soil	RAVECATITYDQLKTGTMPGGANRIRRPRAAVAEPALAG
Ga0318550_106632121	3300031797	Soil	VECATITYDQLTAGLLLAGAARVRRLPATVGQPASAG
Ga0318497_100429496	3300031805	Soil	GLDRYLIRRAVECATITYDQLTAGAMPAGARVHRPPATVGQPALAG
Ga0306925_104021812	3300031890	Soil	VECATITYNQLKAGIMPDGANRIRRVATEVVQPALAR
Ga0306925_113017421	3300031890	Soil	RAVECATITYDQLKASAMPTGAARIPRLPATVGQPALAG
Ga0318536_104154071	3300031893	Soil	AVECATITYDQLKAGAIPSGAPRVRRLPVMVGQPALA
Ga0306923_109586131	3300031910	Soil	RAVECATITYDQLKAGIMPDGANRVRRAAAEVARPALAR
Ga0306921_108217781	3300031912	Soil	AVECATITYDQLTAGAMPAGAARVHRPPATVGRPALAG
Ga0306921_119882083	3300031912	Soil	VECATITYDQLKAGAIPSGAPRVRRLPVMVGQPALA
Ga0310912_104923381	3300031941	Soil	RYLIRRAVECATITYDQLTAGLLLAGAARVRRLPATVG
Ga0310916_105210523	3300031942	Soil	VGLDRYLIRRAVECATITYDQLTASLMPAGATRIRRLPATVGRPALA
Ga0310916_114779641	3300031942	Soil	DRYLIRRAVECATITYDQLTAGAMPAGAARVRRLPAAVGEPALAR
Ga0310913_103384801	3300031945	Soil	LIRRAVECATITYDQLTASLMPAGATRIRRLPATVGRPALA
Ga0310909_113778922	3300031947	Soil	GYLIRRAVECATITYDQLKTGTMPGGANRIRRPRAAVAEPALAG
Ga0310909_114204901	3300031947	Soil	ECATITYDQLKTATMPGGANRIRRPRAAVAEPALAG
Ga0306926_111243771	3300031954	Soil	ELDRYLIRRAVECATITYDQLKAGAIPAGAARIPRSPATVGQPALAG
Ga0306926_120008592	3300031954	Soil	RAVECATITYNQLKAGIMPDGANRVRRVATEVVQPALAR
Ga0307479_103263893	3300031962	Hardwood Forest Soil	DRYLIRRAVECATITYDQLTAGVMPAGAARVRRLPATVVQPALAG
Ga0306922_106850911	3300032001	Soil	VECASITYDQLTAGDMLAGGARVRRLPAKVGEPALAR
Ga0306922_120348652	3300032001	Soil	CATITYDQLKTATMPGGANRIRRPRAAVAEPALAG
Ga0310911_101981551	3300032035	Soil	GLDRYLIRRAVECATITYDQLTTGLSLAGAARVRRLPATVGQPASAG
Ga0318556_103894391	3300032043	Soil	RAVECATITYDQLTTGLLLAGAARVRRLPATVGQPASAG
Ga0318513_101999921	3300032065	Soil	AVECATITYDQLTAGAMPAGAARVHRPPATVRQPALAG
Ga0306924_102454074	3300032076	Soil	AVECATITYDQLKTATMPSGANRIRRPRAAVAEPALAG
Ga0306924_111467512	3300032076	Soil	DGLDRYLIRRAVECATITHDQLTAGLLLAGAARVRRLPATVGQPASAG
Ga0306924_117957291	3300032076	Soil	AVECATITYDQLTASLMPAGATRIRRLPVTVWRPALA
Ga0306924_118505101	3300032076	Soil	AVECATITYDQLKTGTMPGGANRIRRPRAAVAEPALAG
Ga0306924_125909982	3300032076	Soil	CATITYDQLKAGAMPVGAARVRRLPAIVGQPALAG
Ga0306920_1009008681	3300032261	Soil	VECATITYDQLTASLMPAGATRIRRLPVTVWRPALA
Ga0306920_1014953261	3300032261	Soil	RAVECATITYDQLTASLMPAGATRIRRLPVTVWRPALA
Ga0306920_1022710642	3300032261	Soil	VECATITYDQLTASLMPAGATRIRRLPATVGRPALA
Ga0318519_108072811	3300033290	Soil	LIRRAVECATITYDQLKASAMPTGAARIPRLPATVGQPALAG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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