Metagenome Family F052176

Basic Information
Family ID	F052176
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	63 residues
Representative Sequence	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Number of Associated Samples	127
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.35 %
% of genes near scaffold ends (potentially truncated)	29.37 %
% of genes from short scaffolds (< 2000 bps)	93.71 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (82.517 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (37.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.951 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.05% Coil/Unstructured: 82.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF04545	Sigma70_r4	15.38
PF07536	HWE_HK	9.79
PF11752	DUF3309	6.99
PF03401	TctC	3.50
PF07886	BA14K	1.40
PF00296	Bac_luciferase	1.40
PF01709	Transcrip_reg	1.40
PF02782	FGGY_C	0.70
PF08379	Bact_transglu_N	0.70
PF05119	Terminase_4	0.70
PF03279	Lip_A_acyltrans	0.70
PF14255	Cys_rich_CPXG	0.70
PF13432	TPR_16	0.70
PF00903	Glyoxalase	0.70
PF05128	DUF697	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	9.79
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	9.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.50
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	1.40
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.40
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.70
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.70
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	0.70
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.92 %
Unclassified	root	N/A	16.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.92 %
Unclassified	root	N/A	16.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.52 %
Unclassified	root	N/A	16.08 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.82 %
Unclassified	root	N/A	16.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.70 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.06 %
Unclassified	root	N/A	16.08 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.70 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.37 %
Unclassified	root	N/A	16.08 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.70 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.70 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.10 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.70 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.70 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.70 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.10 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.70 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.70 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.70 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.70 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.70 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.70 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.70 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.70 %
Amaranthaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.08 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.10 %
Bosea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	0.70 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.70 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Actinobacteria bacterium RBG_13_63_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_109450252	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300001305\|C688J14111_10296526	Not Available	512	Open in IMG/M
3300002568\|C688J35102_119935947	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300004114\|Ga0062593_102268193	Not Available	610	Open in IMG/M
3300004156\|Ga0062589_100120858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1725	Open in IMG/M
3300004156\|Ga0062589_100760572	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300004157\|Ga0062590_100429391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1096	Open in IMG/M
3300004157\|Ga0062590_102081709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300004463\|Ga0063356_100365537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1834	Open in IMG/M
3300004479\|Ga0062595_101313237	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300004479\|Ga0062595_102493238	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300004480\|Ga0062592_100834006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	822	Open in IMG/M
3300005184\|Ga0066671_11023273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300005330\|Ga0070690_101181428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	610	Open in IMG/M
3300005331\|Ga0070670_100958505	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300005335\|Ga0070666_11337844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300005338\|Ga0068868_101191671	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300005341\|Ga0070691_10154129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1180	Open in IMG/M
3300005344\|Ga0070661_100592294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	896	Open in IMG/M
3300005353\|Ga0070669_101154542	Not Available	668	Open in IMG/M
3300005355\|Ga0070671_100113125	All Organisms → cellular organisms → Bacteria → Proteobacteria	2281	Open in IMG/M
3300005366\|Ga0070659_100200471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1643	Open in IMG/M
3300005535\|Ga0070684_100900864	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300005539\|Ga0068853_100990874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	809	Open in IMG/M
3300005545\|Ga0070695_100634299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300005548\|Ga0070665_100526536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1194	Open in IMG/M
3300005548\|Ga0070665_100533456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1185	Open in IMG/M
3300005560\|Ga0066670_10759333	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005616\|Ga0068852_101744090	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300005718\|Ga0068866_10326722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	967	Open in IMG/M
3300005719\|Ga0068861_101689741	Not Available	626	Open in IMG/M
3300005841\|Ga0068863_101687447	Not Available	643	Open in IMG/M
3300005842\|Ga0068858_102316326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300005844\|Ga0068862_101221159	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300005844\|Ga0068862_101876612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300006031\|Ga0066651_10593232	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300006047\|Ga0075024_100249246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300006172\|Ga0075018_10098598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1292	Open in IMG/M
3300006177\|Ga0075362_10685804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	534	Open in IMG/M
3300006178\|Ga0075367_10892418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	567	Open in IMG/M
3300006178\|Ga0075367_10936604	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300006854\|Ga0075425_101577920	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300009012\|Ga0066710_101298278	Not Available	1129	Open in IMG/M
3300009143\|Ga0099792_10071824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300009174\|Ga0105241_10819055	Not Available	859	Open in IMG/M
3300009176\|Ga0105242_11593234	Not Available	686	Open in IMG/M
3300009176\|Ga0105242_12297892	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300009551\|Ga0105238_11886743	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300009650\|Ga0105857_1129841	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300009661\|Ga0105858_1216512	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300009840\|Ga0126313_10502834	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300010037\|Ga0126304_10485284	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300010044\|Ga0126310_10669087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	783	Open in IMG/M
3300010325\|Ga0134064_10380113	Not Available	559	Open in IMG/M
3300010401\|Ga0134121_10629223	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300011119\|Ga0105246_10267317	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300011433\|Ga0137443_1052887	Not Available	1110	Open in IMG/M
3300012096\|Ga0137389_11358246	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300012361\|Ga0137360_11234640	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300012469\|Ga0150984_117407445	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300012891\|Ga0157305_10099175	Not Available	715	Open in IMG/M
3300012899\|Ga0157299_10285423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300012904\|Ga0157282_10300510	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300012905\|Ga0157296_10200640	Not Available	636	Open in IMG/M
3300012917\|Ga0137395_10378923	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300012923\|Ga0137359_11177834	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300012929\|Ga0137404_10561359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300012930\|Ga0137407_10069562	All Organisms → cellular organisms → Bacteria → Proteobacteria	2927	Open in IMG/M
3300012931\|Ga0153915_10097568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3114	Open in IMG/M
3300012944\|Ga0137410_11644692	Not Available	564	Open in IMG/M
3300012951\|Ga0164300_10404679	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300012958\|Ga0164299_10673170	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300012958\|Ga0164299_10966723	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300012987\|Ga0164307_10159575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1494	Open in IMG/M
3300012988\|Ga0164306_10638928	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300012988\|Ga0164306_11192353	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300012989\|Ga0164305_10453844	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300013297\|Ga0157378_11114363	Not Available	827	Open in IMG/M
3300014745\|Ga0157377_11356917	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300014969\|Ga0157376_11803117	Not Available	648	Open in IMG/M
3300015200\|Ga0173480_10197914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1063	Open in IMG/M
3300015371\|Ga0132258_10215221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4671	Open in IMG/M
3300017792\|Ga0163161_10377009	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300017792\|Ga0163161_10398958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1103	Open in IMG/M
3300018055\|Ga0184616_10311857	Not Available	595	Open in IMG/M
3300018067\|Ga0184611_1117752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300018073\|Ga0184624_10282285	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300018083\|Ga0184628_10630761	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300018422\|Ga0190265_10038062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4073	Open in IMG/M
3300018431\|Ga0066655_11132235	Not Available	550	Open in IMG/M
3300018432\|Ga0190275_10998629	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300018432\|Ga0190275_12657046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300018468\|Ga0066662_12081936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_13_63_9	595	Open in IMG/M
3300018469\|Ga0190270_11957733	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300018482\|Ga0066669_10636219	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300018482\|Ga0066669_10676497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300019356\|Ga0173481_10174529	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300020167\|Ga0194035_1179868	Not Available	654	Open in IMG/M
3300021082\|Ga0210380_10029648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2336	Open in IMG/M
3300021339\|Ga0193706_1184144	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300021363\|Ga0193699_10196921	Not Available	836	Open in IMG/M
3300022756\|Ga0222622_10035485	All Organisms → cellular organisms → Bacteria → Proteobacteria	2699	Open in IMG/M
3300022886\|Ga0247746_1037942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1088	Open in IMG/M
3300022886\|Ga0247746_1123421	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300023266\|Ga0247789_1075040	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300025315\|Ga0207697_10112222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1168	Open in IMG/M
3300025899\|Ga0207642_10044341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1968	Open in IMG/M
3300025901\|Ga0207688_10140352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300025901\|Ga0207688_10239421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300025912\|Ga0207707_10900622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	731	Open in IMG/M
3300025921\|Ga0207652_11296535	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300025930\|Ga0207701_10750175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	825	Open in IMG/M
3300025934\|Ga0207686_10416839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1026	Open in IMG/M
3300025938\|Ga0207704_11223590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300025940\|Ga0207691_10432802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1120	Open in IMG/M
3300025960\|Ga0207651_10241284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1473	Open in IMG/M
3300025960\|Ga0207651_11469585	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300025961\|Ga0207712_10401525	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	1152	Open in IMG/M
3300026035\|Ga0207703_10803246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	898	Open in IMG/M
3300026075\|Ga0207708_10237815	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300026118\|Ga0207675_100727188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1003	Open in IMG/M
3300026121\|Ga0207683_10380307	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300026306\|Ga0209468_1065967	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1217	Open in IMG/M
3300027910\|Ga0209583_10391055	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300027915\|Ga0209069_10246188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	929	Open in IMG/M
3300027915\|Ga0209069_10441654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300028380\|Ga0268265_11166215	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300028381\|Ga0268264_12669212	Not Available	503	Open in IMG/M
3300028800\|Ga0265338_10674817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300031200\|Ga0307496_10114921	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031226\|Ga0307497_10346661	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031446\|Ga0170820_10037275	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031716\|Ga0310813_12032414	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031726\|Ga0302321_103223008	Not Available	532	Open in IMG/M
3300031847\|Ga0310907_10852964	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300031858\|Ga0310892_10120477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1473	Open in IMG/M
3300031913\|Ga0310891_10365549	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300031949\|Ga0214473_10039993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5501	Open in IMG/M
3300032003\|Ga0310897_10252478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	790	Open in IMG/M
3300033407\|Ga0214472_11431112	Not Available	594	Open in IMG/M
3300033489\|Ga0299912_10132422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2176	Open in IMG/M
3300033513\|Ga0316628_104143771	Not Available	516	Open in IMG/M
3300034268\|Ga0372943_0381630	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.03%
Host-Associated	Host-Associated	34.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	34.97%
Aquatic	Environmental → Aquatic	10.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.08%
Sediment	Environmental → Aquatic → Sediment	7.69%
Freshwater	Environmental → Aquatic → Freshwater	2.10%
Roots	Host-Associated → Plants → Roots	2.10%
Marine	Environmental → Aquatic → Marine	0.70%
Peat	Environmental → Terrestrial → Peat	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	6.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.10%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Lake	Environmental → Aquatic → Freshwater → Lake	0.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.80%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.10%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.70%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.10%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.70%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052176

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1094502522	3300001213	Wetland	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMFSWDSNRVPRFKLLVPPDNTRAQS*
C688J14111_102965262	3300001305	Soil	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPPR
C688J35102_1199359472	3300002568	Soil	MTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP
Ga0062593_1022681931	3300004114	Soil	MQIFKCPHCSAEYEFIMTHLSFRQRSYATCQVCWKAMYSWDSSRVPHFKLLVQPDNTRAQN*
Ga0062589_1001208582	3300004156	Soil	VAAEPAHTVTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP*
Ga0062589_1007605721	3300004156	Soil	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQN*
Ga0062590_1004293912	3300004157	Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLEKTDGTPTRM*
Ga0062590_1020817092	3300004157	Soil	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNT
Ga0063356_1003655372	3300004463	Arabidopsis Thaliana Rhizosphere	MTIFKCPHCRAEYELIMTHISFRQRSYAPCQVCWKTMYSWDSPRVPRFTLVKQPDNVLASGV*
Ga0062595_1013132372	3300004479	Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSNRVPRFKLLVQPDNTRAQS*
Ga0062595_1024932382	3300004479	Soil	GQLEAAVKLAHTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0062592_1008340062	3300004480	Soil	MTIFKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAHN*
Ga0066671_110232732	3300005184	Soil	MTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFT
Ga0070690_1011814281	3300005330	Switchgrass Rhizosphere	MTIFKCPHCGAGYELIMTHISFRQRSYANCQVCWKAMYSWDSNRVPRFKLLVQPDNTRAQS*
Ga0070670_1009585051	3300005331	Switchgrass Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0070666_113378442	3300005335	Switchgrass Rhizosphere	MTIFKCPHCSAQYEMIMTHISFRQRSYAACQVCSKAMYSWFSSRVPRFTLLVQPDNTPQP
Ga0068868_1011916712	3300005338	Miscanthus Rhizosphere	HTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0070691_101541292	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VAAEPAHTVTMTIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQN*
Ga0070661_1005922942	3300005344	Corn Rhizosphere	MTIFKCPHCGAGYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVQPDNTRAQN*
Ga0070669_1011545421	3300005353	Switchgrass Rhizosphere	VAVKLAHTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0070671_1001131253	3300005355	Switchgrass Rhizosphere	VAAEPAHTVTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTPRP*
Ga0070659_1002004712	3300005366	Corn Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQPASTPARP*
Ga0070684_1009008642	3300005535	Corn Rhizosphere	MTIFKCPHCSAQYEMIMTHISFRQRSYAACQVCSKAMYSWFSSRVPRFTLLVQ
Ga0068853_1009908742	3300005539	Corn Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWAGSQVPRFTLLVQPDNTPRP
Ga0070695_1006342992	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTHGQN*
Ga0070665_1005265363	3300005548	Switchgrass Rhizosphere	MAMTIFKCPHCGAQYEMIMTHISFRQRSYAACQVCSKAMYSWFSSRVPRFTLLVQPDNTPQA*
Ga0070665_1005334562	3300005548	Switchgrass Rhizosphere	MKESGASLVAIIKQAHTVTMTIFKCPHCAAQYEMIMTNISFRQRSYAACQVCAKAMYSWDGTRVPRFTLVVQPDNTPQP*
Ga0066670_107593332	3300005560	Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP*
Ga0068852_1017440902	3300005616	Corn Rhizosphere	TMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP*
Ga0068866_103267222	3300005718	Miscanthus Rhizosphere	VAAEPAHTVTMTTFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTPRP*
Ga0068861_1016897411	3300005719	Switchgrass Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLEKTDGTPTRM*
Ga0068863_1016874473	3300005841	Switchgrass Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQN*
Ga0068858_1023163262	3300005842	Switchgrass Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLLEQPASTPARP*
Ga0068862_1012211591	3300005844	Switchgrass Rhizosphere	VPAKLAHTVAMQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQQPDSTPTRA*
Ga0068862_1018766122	3300005844	Switchgrass Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAHN*
Ga0066651_105932322	3300006031	Soil	MTIFKCPHCSAEYEMIMTHISFRQLSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTPRP
Ga0075024_1002492462	3300006047	Watersheds	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWTGTRVPRFTLLVQPDNTPQP
Ga0075018_100985982	3300006172	Watersheds	MTIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSTRVPRFKLLVQPDNTRAHN*
Ga0075362_106858041	3300006177	Populus Endosphere	MTIFKCPHCAAEYEMIMTNISFRQVSYANCQVCWKAMYSWASSKVPRFTLLVQPDNTPPS
Ga0075367_108924181	3300006178	Populus Endosphere	TMTIFKCPHCAAEYEMIMTNISFRQVSYANCQVCWKAMYSWASSKVPRFTLLVQPDNTPRP*
Ga0075367_109366041	3300006178	Populus Endosphere	MTIFKCPHCSAQYEMIMTHISFRQRSYAACQVCSKAMYSWFSSRVPRFTLLVQPDNTPQS
Ga0075425_1015779202	3300006854	Populus Rhizosphere	MTIFKCPHCSAEYEMIMTHVSFRQVSYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP
Ga0066710_1012982783	3300009012	Grasslands Soil	MTIFKCPHCRTEYELIMTHLSFRQRSYAVCQSCSKIMYSWNSQRVPRFTRLEQPVGSLRG
Ga0099792_100718243	3300009143	Vadose Zone Soil	MAAELAHTGAMTTTMTIFKCPHCSAEYEMIMTHISFRQRSYANCQVCWKTMYSWASTRVPRFTLLVQPDNTRRP*
Ga0105241_108190552	3300009174	Corn Rhizosphere	FALATEQAHSLPMTLFKCPHCGAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLEKTDGTPTRV*
Ga0105242_115932342	3300009176	Miscanthus Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNT
Ga0105242_122978922	3300009176	Miscanthus Rhizosphere	MQIFKCPHCAVQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0105238_118867431	3300009551	Corn Rhizosphere	CPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP*
Ga0105857_11298412	3300009650	Permafrost Soil	MAAKLAHTVAMTTAMTIFKCPHCSAEYEMIMTHISFRQRSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTHAHN*
Ga0105858_12165122	3300009661	Permafrost Soil	MTMTLFKCPHCSVEYEMIMTHISFRQRSYANCQVCWKNMYSWDSSKVPRFTLLVQPDNTHAHN*
Ga0126313_105028342	3300009840	Serpentine Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPARP*
Ga0126304_104852841	3300010037	Serpentine Soil	RWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPARH*
Ga0126310_106690872	3300010044	Serpentine Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQPASMPARP*
Ga0134064_103801131	3300010325	Grasslands Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTL
Ga0134121_106292232	3300010401	Terrestrial Soil	MTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP*
Ga0105246_102673173	3300011119	Miscanthus Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPPP
Ga0137443_10528872	3300011433	Soil	MTIFKCPHCRTEYELIMTHISFRQRSYASCQVCWKAMYSWDSSRVPRFTLLEQTGGTLARL*
Ga0137389_113582462	3300012096	Vadose Zone Soil	MTTTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKTMYSWASTRVPRFTLLVQPDNTRRP*
Ga0137360_112346402	3300012361	Vadose Zone Soil	AMTTTMTIFKCPHCSAEYEMIMTHISFRQLSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTPRR*
Ga0150984_1174074451	3300012469	Avena Fatua Rhizosphere	IFKCPHCSAEYEMIMTHISFRQLSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTSRP*
Ga0157305_100991752	3300012891	Soil	MTIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQN*
Ga0157299_102854232	3300012899	Soil	MQIFKCPHCAVQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARR*
Ga0157282_103005102	3300012904	Soil	FKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRLTLVVQPDNTRAHN*
Ga0157296_102006402	3300012905	Soil	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWDSSRVPRFKLLEKTDGTPTRM*
Ga0137395_103789231	3300012917	Vadose Zone Soil	VAAERAHTVAMTTTMTIFKCPHCSAEYEMIMTHISFRQLSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTSRP*
Ga0137359_111778341	3300012923	Vadose Zone Soil	MMTMTIFKCPHCSAEYEMIMTHISFRQLSYANCQVCWKPMYSWASTRVPRFTLLVQPDNTQRP*
Ga0137404_105613592	3300012929	Vadose Zone Soil	MSTTMTIFKCPHCSAEYEMIMTHVSFRQRSYANCQLCWKPMYSWTSSRVPRFTLLVQPDNTPPS*
Ga0137407_100695621	3300012930	Vadose Zone Soil	MAAELAHTGAMTTTMTIFKCPHCSAEYEMIMTHVSFRQRSYANCQVCWKPMYSWTSSRVPRFTLLVQPDNTPPS*
Ga0153915_100975684	3300012931	Freshwater Wetlands	MTIFKCPHCRTEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQPGGTLARL*
Ga0137410_116446922	3300012944	Vadose Zone Soil	MAMTTTMTIFKCPHCSAEYEMIMTHISFRQRSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTSRP*
Ga0164300_104046791	3300012951	Soil	CSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP*
Ga0164299_106731701	3300012958	Soil	MQIFKCPHCAAQYEIIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQPASTPARP*
Ga0164299_109667231	3300012958	Soil	PAHTVTMTIFKCPHCSADYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP*
Ga0164307_101595752	3300012987	Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPA*
Ga0164306_106389281	3300012988	Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQ
Ga0164306_111923532	3300012988	Soil	MTVFKCPHCSAAYERIMTHVSFRQLRYANCQVSTKAMYSWARSRVPRFTLLVQPDNTPPP
Ga0164305_104538442	3300012989	Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPRP*
Ga0157378_111143632	3300013297	Miscanthus Rhizosphere	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWASTRVPRFTLLVQPDNTP
Ga0157377_113569171	3300014745	Miscanthus Rhizosphere	SAEYEMIMTHISFRQVSYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPRP*
Ga0157376_118031173	3300014969	Miscanthus Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQP
Ga0173480_101979143	3300015200	Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPARR*
Ga0132258_102152213	3300015371	Arabidopsis Rhizosphere	MAMTIFKCPHCRAEYELLMTHISFRQRSYANCQRCWKTMYSWNSSRVPRFRLLEPPEPKLARG*
Ga0163161_103770093	3300017792	Switchgrass Rhizosphere	MTIFKCPHCGAQYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0163161_103989581	3300017792	Switchgrass Rhizosphere	KLAHTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP
Ga0184616_103118572	3300018055	Groundwater Sediment	MQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPAR
Ga0184611_11177521	3300018067	Groundwater Sediment	VAVKLAHTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP
Ga0184624_102822851	3300018073	Groundwater Sediment	VKLAHTWAMQIFKCPHCAVQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP
Ga0184628_106307612	3300018083	Groundwater Sediment	QIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP
Ga0190265_100380623	3300018422	Soil	MTIYKCPHCRAEYELIMTYVSYRQRSYAHCQVCWKTMYSWDSPRVPHFTLVKQPDNMLALNI
Ga0066655_111322351	3300018431	Grasslands Soil	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLVVQPDNTPRP
Ga0190275_109986291	3300018432	Soil	MQIFKCPHCSAEYELIMTYISFRQRSYANCQVCWKAMYSWDSTRVPRFKLVVQPDNTRAQ
Ga0190275_126570461	3300018432	Soil	MNIFKCPHCEAQYELIVSHVSFRQRSYATCQVCWKTMYSWDSARVPRFTLIEQPEPARAP
Ga0066662_120819361	3300018468	Grasslands Soil	IFKCPHCSAEYEMIMTHVSFRQRSYANCQVCWKAMYSWAGNRVPRFTLLVQPDNTPRS
Ga0190270_119577332	3300018469	Soil	MQIFKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLMVQPDNTRAQ
Ga0066669_106362193	3300018482	Grasslands Soil	FKCPHCSAEYEMIMTHISFRQLSYANCQVCWKTMYSWASTPVPRFTLLVQPDNTPRP
Ga0066669_106764972	3300018482	Grasslands Soil	VAAERAHTVAMTTTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP
Ga0173481_101745292	3300019356	Soil	MQIFKCPHCAVQYELIMSHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPAR
Ga0194035_11798683	3300020167	Anoxic Zone Freshwater	MTIFKCPHCSAQYELIMTHMSFRQRSYANCQVCWKNMYSWDSNKVPRFTLMVPDEHTRAE
Ga0210380_100296482	3300021082	Groundwater Sediment	MTIFKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAH
Ga0193706_11841442	3300021339	Soil	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSNRVPRFKLLVQPDNTRAQ
Ga0193699_101969212	3300021363	Soil	VAAELAHTVAKAMTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTSRP
Ga0222622_100354854	3300022756	Groundwater Sediment	VAAELAHTVAKAMTMTVFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTSRP
Ga0247746_10379422	3300022886	Soil	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0247746_11234211	3300022886	Soil	HRLAMQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPARH
Ga0247789_10750401	3300023266	Soil	AKAHRGGMTIFKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPARR
Ga0207697_101122222	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTIFKCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQ
Ga0207642_100443413	3300025899	Miscanthus Rhizosphere	VAAEPAHTVTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0207688_101403524	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VAVKLAHTWAMQIFKCPHCAVQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLVEQPDSTPARP
Ga0207688_102394211	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0207707_109006222	3300025912	Corn Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQ
Ga0207652_112965352	3300025921	Corn Rhizosphere	AAEPAHTVTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0207701_107501752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTIFKCPHCSAQYEMIMTHISFRQRSYAACQVCSKAMYSWFSSRVPRFTLLVQPDNTPPS
Ga0207686_104168392	3300025934	Miscanthus Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPP
Ga0207704_112235901	3300025938	Miscanthus Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAH
Ga0207691_104328022	3300025940	Miscanthus Rhizosphere	MTIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVPADNTRGQ
Ga0207651_102412842	3300025960	Switchgrass Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVEQPDSTPAR
Ga0207651_114695851	3300025960	Switchgrass Rhizosphere	QTGAYGLMQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSNRVPRFKLLVQPDNTRAQS
Ga0207712_104015252	3300025961	Switchgrass Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAH
Ga0207703_108032462	3300026035	Switchgrass Rhizosphere	MTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPA
Ga0207708_102378152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTIFKCPHCSAEYEMIMTHISFRQRSYANCQVCWKTMYSWASTRVPRFTLLVQPDNTPRP
Ga0207675_1007271882	3300026118	Switchgrass Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLEKTDGTPTR
Ga0207683_103803073	3300026121	Miscanthus Rhizosphere	MQIFKCPHCAAQYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFKLLVQPDNTRAQ
Ga0209468_10659671	3300026306	Soil	MTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPP
Ga0209583_103910552	3300027910	Watersheds	VAAELAHTGAMTIFKCPHCAAEYEMIMTHISFRQVSYANCQVCWKTMYSWASARVPRCTLLVQPDNTPRS
Ga0209069_102461882	3300027915	Watersheds	VAAKLAHTVAMTTAMTIFKCPHCGTEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPAHN
Ga0209069_104416542	3300027915	Watersheds	MTIFKCPHCSAQYELIMTHISFRQRSYATCQVCWKNMYSWDSNKVPRFTLVVPQEHTSAE
Ga0268265_111662152	3300028380	Switchgrass Rhizosphere	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEQQPDSTPTRA
Ga0268264_126692122	3300028381	Switchgrass Rhizosphere	VAVKLAHTWAMQIFKCPHCAAQYELIMTHISFRQRSYANCQMCWKAMYSWDSSRVPRFTLLEQPASTPARP
Ga0265338_106748172	3300028800	Rhizosphere	VAAKRAHTVAMTTTMTIFKCPHCAAEYEMIMTHISFRQRSYANCQVCWKAMFSWASNRVPRFTLLVQPDNTPAHN
Ga0307496_101149212	3300031200	Soil	IFKCPHCSAEYEMIMTHVSFRQRSYANCQVCWKAMYSWVGNRVPRFTLLVQPDNTPRS
Ga0307497_103466611	3300031226	Soil	KCPHCSAEYEFIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLVVQPDNTRAHN
Ga0170820_100372751	3300031446	Forest Soil	MQIFKCPHCSAEYEMIMTHISFRQRSYANCQVCWKTMYSWASTRVPRFTLLVQPDNTHAH
Ga0310813_120324142	3300031716	Soil	MTMTIFKCPHCSAEYEMIMTHVSFRQVRYANCQVCWKAMYSWAGSRVPRFTLLVQPDNTPPA
Ga0302321_1032230082	3300031726	Fen	MTIFKCPHCSAEYEMIMTHISFRQRSYATCQVCWKAMYSWASTRVPRFTLLVQPDHTPVH
Ga0310907_108529641	3300031847	Soil	ARTMTNFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMFSWASTRVPRFTLLVQPDNTSRP
Ga0310892_101204772	3300031858	Soil	MTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTSRP
Ga0310891_103655491	3300031913	Soil	AHTGPKARTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0214473_100399934	3300031949	Soil	MTVFKCPHCQTEYELIMTHISFRQRSYANCQVCWKTMYSWDSSRVPRFALLEQKDNALAG
Ga0310897_102524782	3300032003	Soil	VAAEPAQTVTMTIFKCPHCSAEYEMIMTHISFRQVSYANCQVCWKAMYSWASTRVPRFTLLVQPDNTPRP
Ga0214472_114311122	3300033407	Soil	MVGNQVLGFEMTVFKCPHCQTEYELIMTHISFRQRSYANCQVCWKTMYSWDSSRVPRFALLEQKDNALAGI
Ga0299912_101324223	3300033489	Soil	MTIFKCPHCAAEYELMMTHISFRQRSYANCQRCWKTMYSWDSSRVPRFTLVEQPEKTLAR
Ga0316628_1041437712	3300033513	Soil	QQVDRTAMTIFKCPHCRSEYEIIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLEATGGKPARL
Ga0372943_0381630_163_348	3300034268	Soil	MQIFKCPHCSAEYELIMTHISFRQRSYANCQVCWKAMYSWDSSRVPRFTLLVQPDNTGTH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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