Metagenome / Metatranscriptome Family F052235

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052235
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	105 residues
Representative Sequence	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHRIELLAVAQSCTALME
Number of Associated Samples	123
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.87 %
% of genes near scaffold ends (potentially truncated)	37.76 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.245 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (13.287 % of family members)
Environment Ontology (ENVO)	Unclassified (47.552 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.73% β-sheet: 8.82% Coil/Unstructured: 27.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00005	ABC_tran	4.90
PF12543	DUF3738	4.20
PF00440	TetR_N	2.10
PF13414	TPR_11	2.10
PF04116	FA_hydroxylase	2.10
PF00989	PAS	1.40
PF12637	TSCPD	1.40
PF00160	Pro_isomerase	1.40
PF01872	RibD_C	1.40
PF02627	CMD	0.70
PF13564	DoxX_2	0.70
PF07452	CHRD	0.70
PF00196	GerE	0.70
PF13432	TPR_16	0.70
PF13548	DUF4126	0.70
PF07859	Abhydrolase_3	0.70
PF13472	Lipase_GDSL_2	0.70
PF05721	PhyH	0.70
PF05163	DinB	0.70
PF13517	FG-GAP_3	0.70
PF00144	Beta-lactamase	0.70
PF00248	Aldo_ket_red	0.70
PF00664	ABC_membrane	0.70
PF01833	TIG	0.70
PF13607	Succ_CoA_lig	0.70
PF13371	TPR_9	0.70
PF07676	PD40	0.70
PF01066	CDP-OH_P_transf	0.70
PF07687	M20_dimer	0.70
PF10282	Lactonase	0.70
PF12840	HTH_20	0.70
PF02687	FtsX	0.70
PF01103	Omp85	0.70
PF02867	Ribonuc_red_lgC	0.70
PF11954	DUF3471	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	2.10
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.40
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	1.40
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.40
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.70
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.70
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.70
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.70
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.70
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.70
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.70
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.70
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.70
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.49 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.40 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.10 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.40 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.10 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.40 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.10 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.40 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.70 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.10 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.40 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.70 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.70 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.10 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.40 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.70 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.70 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.10 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.40 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.70 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.70 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105430196	All Organisms → cellular organisms → Bacteria → Nitrospirae	729	Open in IMG/M
3300000956\|JGI10216J12902_109409730	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300004156\|Ga0062589_101284823	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300004479\|Ga0062595_101046972	Not Available	707	Open in IMG/M
3300005335\|Ga0070666_10120288	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005337\|Ga0070682_100530182	Not Available	918	Open in IMG/M
3300005338\|Ga0068868_100057825	All Organisms → cellular organisms → Bacteria → Proteobacteria	3064	Open in IMG/M
3300005343\|Ga0070687_100524078	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005355\|Ga0070671_100940719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300005356\|Ga0070674_100650778	Not Available	896	Open in IMG/M
3300005439\|Ga0070711_100643810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300005441\|Ga0070700_101167304	Not Available	641	Open in IMG/M
3300005441\|Ga0070700_101567358	Not Available	562	Open in IMG/M
3300005456\|Ga0070678_101741820	Not Available	587	Open in IMG/M
3300005466\|Ga0070685_11021505	Not Available	621	Open in IMG/M
3300005526\|Ga0073909_10004086	All Organisms → cellular organisms → Bacteria → Proteobacteria	4311	Open in IMG/M
3300005543\|Ga0070672_101358075	Not Available	635	Open in IMG/M
3300005544\|Ga0070686_100830399	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005546\|Ga0070696_101400079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	596	Open in IMG/M
3300005617\|Ga0068859_101594872	Not Available	721	Open in IMG/M
3300005617\|Ga0068859_102525141	Not Available	566	Open in IMG/M
3300005718\|Ga0068866_10129806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1432	Open in IMG/M
3300005718\|Ga0068866_11149667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005841\|Ga0068863_102366830	Not Available	541	Open in IMG/M
3300005842\|Ga0068858_100644889	Not Available	1029	Open in IMG/M
3300005843\|Ga0068860_100389598	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300005844\|Ga0068862_100754988	Not Available	947	Open in IMG/M
3300006046\|Ga0066652_100832397	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006163\|Ga0070715_10111489	Not Available	1291	Open in IMG/M
3300006237\|Ga0097621_100003934	All Organisms → cellular organisms → Bacteria	10290	Open in IMG/M
3300006237\|Ga0097621_100511723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300006358\|Ga0068871_101638480	Not Available	609	Open in IMG/M
3300006845\|Ga0075421_101846909	Not Available	649	Open in IMG/M
3300006852\|Ga0075433_10001501	All Organisms → cellular organisms → Bacteria	17236	Open in IMG/M
3300006904\|Ga0075424_100026970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5923	Open in IMG/M
3300006918\|Ga0079216_10608957	Not Available	754	Open in IMG/M
3300007004\|Ga0079218_11914155	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009094\|Ga0111539_11240641	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300009094\|Ga0111539_11532246	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300009098\|Ga0105245_11034217	Not Available	866	Open in IMG/M
3300009098\|Ga0105245_11629641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	697	Open in IMG/M
3300009101\|Ga0105247_10248141	Not Available	1216	Open in IMG/M
3300009147\|Ga0114129_10677728	Not Available	1328	Open in IMG/M
3300009147\|Ga0114129_12260796	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300009176\|Ga0105242_11795189	Not Available	652	Open in IMG/M
3300009177\|Ga0105248_10345561	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300009177\|Ga0105248_11185092	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009553\|Ga0105249_10100343	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300009553\|Ga0105249_11792430	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300009597\|Ga0105259_1146145	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009609\|Ga0105347_1045709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300009610\|Ga0105340_1346504	Not Available	657	Open in IMG/M
3300009678\|Ga0105252_10282702	Not Available	735	Open in IMG/M
3300010400\|Ga0134122_11000882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300010401\|Ga0134121_10303863	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	1413	Open in IMG/M
3300010401\|Ga0134121_10867572	Not Available	873	Open in IMG/M
3300010401\|Ga0134121_10941266	Not Available	843	Open in IMG/M
3300010401\|Ga0134121_11173863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300010401\|Ga0134121_13156364	Not Available	509	Open in IMG/M
3300010403\|Ga0134123_12577477	Not Available	575	Open in IMG/M
3300011403\|Ga0137313_1087115	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300011422\|Ga0137425_1074677	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300011423\|Ga0137436_1033245	Not Available	1299	Open in IMG/M
3300011432\|Ga0137428_1197143	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300011434\|Ga0137464_1006349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3061	Open in IMG/M
3300011435\|Ga0137426_1250442	Not Available	529	Open in IMG/M
3300011439\|Ga0137432_1125831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300011445\|Ga0137427_10157428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	936	Open in IMG/M
3300012228\|Ga0137459_1146379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300012232\|Ga0137435_1202222	Not Available	609	Open in IMG/M
3300012912\|Ga0157306_10375465	Not Available	548	Open in IMG/M
3300012961\|Ga0164302_10143233	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300012984\|Ga0164309_10977978	Not Available	696	Open in IMG/M
3300013306\|Ga0163162_12352850	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300013308\|Ga0157375_13520271	Not Available	521	Open in IMG/M
3300014325\|Ga0163163_10017717	All Organisms → cellular organisms → Bacteria	6649	Open in IMG/M
3300014326\|Ga0157380_10418131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1278	Open in IMG/M
3300014868\|Ga0180088_1039083	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300014875\|Ga0180083_1093012	Not Available	658	Open in IMG/M
3300014880\|Ga0180082_1091518	Not Available	682	Open in IMG/M
3300014968\|Ga0157379_11996089	Not Available	573	Open in IMG/M
3300014969\|Ga0157376_10712425	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300015258\|Ga0180093_1161479	Not Available	569	Open in IMG/M
3300015371\|Ga0132258_11346779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1804	Open in IMG/M
3300015371\|Ga0132258_11354146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1798	Open in IMG/M
3300015372\|Ga0132256_103601521	Not Available	521	Open in IMG/M
3300015373\|Ga0132257_100718356	Not Available	1242	Open in IMG/M
3300015374\|Ga0132255_101335753	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300015374\|Ga0132255_102968460	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300017965\|Ga0190266_10168667	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300018083\|Ga0184628_10261423	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300018429\|Ga0190272_11983313	Not Available	616	Open in IMG/M
3300018469\|Ga0190270_12411446	Not Available	588	Open in IMG/M
3300018469\|Ga0190270_13303653	Not Available	511	Open in IMG/M
3300018476\|Ga0190274_13611442	Not Available	522	Open in IMG/M
3300021082\|Ga0210380_10161848	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300025899\|Ga0207642_10134277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300025900\|Ga0207710_10139807	Not Available	1168	Open in IMG/M
3300025916\|Ga0207663_10498320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300025927\|Ga0207687_10090240	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300025930\|Ga0207701_10408808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300025930\|Ga0207701_11724004	Not Available	500	Open in IMG/M
3300025934\|Ga0207686_11064872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025936\|Ga0207670_11173068	Not Available	650	Open in IMG/M
3300025938\|Ga0207704_10274468	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300025940\|Ga0207691_11365502	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300025981\|Ga0207640_11664866	Not Available	576	Open in IMG/M
3300025986\|Ga0207658_11553164	Not Available	605	Open in IMG/M
3300026035\|Ga0207703_10146494	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300026067\|Ga0207678_10385857	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1211	Open in IMG/M
3300026088\|Ga0207641_11198310	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300026089\|Ga0207648_11112354	Not Available	741	Open in IMG/M
3300026118\|Ga0207675_101233410	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300027513\|Ga0208685_1042229	All Organisms → cellular organisms → Bacteria → PVC group	993	Open in IMG/M
3300027543\|Ga0209999_1120864	Not Available	513	Open in IMG/M
3300027821\|Ga0209811_10002263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6361	Open in IMG/M
3300027876\|Ga0209974_10102403	Not Available	1002	Open in IMG/M
3300027886\|Ga0209486_10871269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027907\|Ga0207428_10711827	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300028380\|Ga0268265_10638429	Not Available	1022	Open in IMG/M
3300028381\|Ga0268264_10095124	All Organisms → cellular organisms → Bacteria → Proteobacteria	2577	Open in IMG/M
3300028381\|Ga0268264_12026593	Not Available	585	Open in IMG/M
3300028809\|Ga0247824_10242497	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300028812\|Ga0247825_10754059	Not Available	701	Open in IMG/M
3300030600\|Ga0247659_1176683	Not Available	548	Open in IMG/M
3300031538\|Ga0310888_10043242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2070	Open in IMG/M
3300031562\|Ga0310886_10201275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1086	Open in IMG/M
3300031720\|Ga0307469_10753970	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300031908\|Ga0310900_10045659	Not Available	2538	Open in IMG/M
3300031940\|Ga0310901_10026320	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300031944\|Ga0310884_10524708	Not Available	698	Open in IMG/M
3300032000\|Ga0310903_10601392	Not Available	585	Open in IMG/M
3300032012\|Ga0310902_10512236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	784	Open in IMG/M
3300032012\|Ga0310902_11347351	Not Available	506	Open in IMG/M
3300032013\|Ga0310906_11006596	Not Available	599	Open in IMG/M
3300032017\|Ga0310899_10170836	Not Available	943	Open in IMG/M
3300032180\|Ga0307471_100864085	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300032180\|Ga0307471_104359319	Not Available	500	Open in IMG/M
3300033433\|Ga0326726_10156619	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300033551\|Ga0247830_11649319	Not Available	513	Open in IMG/M
3300034115\|Ga0364945_0107349	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300034147\|Ga0364925_0124223	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.94%
Host-Associated	Host-Associated	44.06%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	44.06%
Terrestrial	Environmental → Terrestrial	41.26%
Aquatic	Environmental → Aquatic	14.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.58%
Sediment	Environmental → Aquatic → Sediment	13.99%
Roots	Host-Associated → Plants → Roots	2.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.40%
Freshwater	Environmental → Aquatic → Freshwater	0.70%
Peat	Environmental → Terrestrial → Peat	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.99%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	13.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.40%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.40%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030600	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054301961	3300000364	Soil	MLKLGRQKVWPMIEDTDHPPASSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLXLAATHALDLVLCWRTSXLXXAEXLVXRLXVHSIXLLAVA
JGI10216J12902_1094097302	3300000956	Soil	MPMDPLPAPSTRRIAIYISHPDSPWAANHLAAIQRYADAMGWVTVAIVERDEQRLLDLAAMHALDLVLCWRTSDLRRAESLVQRLSVHGIELLAVAQSCTALME*
soilH1_101777162	3300003321	Sugarcane Root And Bulk Soil	MQPIEPPPSPRRVAIYVSGDSQLHANQQAAMRRYADAMGWVTAVIIEKDMRRLLDAAAEHAFDLVVCWRLRDLRSESVLECLSVHNIELLALAQSCSALME*
Ga0062589_1012848231	3300004156	Soil	DEFHMIEDTDHPPVSSPRRIAIYISRPDSLLAANQLAAIQRYACAMGWVTVAVVERDERRLLELAATHALDLVLCWRISDLRPADSLVQLLSGRSIELLAVAQSCTSLME*
Ga0062595_1010469722	3300004479	Soil	MASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVESDEQRLLDLAATQAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME*
Ga0070666_101202882	3300005335	Switchgrass Rhizosphere	ASSTRRIAIYISRPDSPWAANQLAAIQRYACAMGWVTVAIVEGDEQRLLELAATHALDLVLCWRTSDLPPAESLAQRLSVHRIDLLAVAQSCTALME*
Ga0070682_1005301822	3300005337	Corn Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTSLME*
Ga0068868_1000578252	3300005338	Miscanthus Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIELLAVAQSCTALME*
Ga0070687_1005240781	3300005343	Switchgrass Rhizosphere	DHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVESDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME*
Ga0070671_1009407191	3300005355	Switchgrass Rhizosphere	MDHPPASATRRIAIYTSRPDSPWAANQLAAIQRYAGAMGWVTVAIVESDEQRLLDLAAARALDLVLCWRTSDLRRAESLVQRLSAHRIELLAVAQSCSALME*
Ga0070674_1006507781	3300005356	Miscanthus Rhizosphere	LAAQKVWPVIDDMDHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYAVAMGWVTVAIVESDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME*
Ga0070711_1006438101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDLRPNESLVQVLSVHSVELLAVAQSCTSLME*
Ga0070700_1011673041	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RPDSPLAANQLAAIQRYARGMGWLTVAIVGSDEQRLLDLAATHALDLVLCWRTSDLRDADALVQGLSVHGIELLAVAQSCTALME*
Ga0070700_1015673581	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVEGDEQRLLELAATHALDLVLCWRTSDLPPAESLAQRLSVHRIDLLAVAQSCTALME*
Ga0070678_1017418201	3300005456	Miscanthus Rhizosphere	RLRFRPVSAGRNRAARHVWSMIEDTDHPPASSTRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELVATHALDLVLCWRTSDLRPAGSLVHLLSAHSIELLAVAQSCTALME*
Ga0070685_110215051	3300005466	Switchgrass Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAQSLVQRLSVHSIELLAVAQSCTALME*
Ga0073909_100040863	3300005526	Surface Soil	MIEETDHPPESSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDLRPNESLVQVLSVHSVELLAVAQSCTSLME*
Ga0070672_1013580752	3300005543	Miscanthus Rhizosphere	MSEDTDHPPASSTRRIAIYISRPDSPWAANQLAAIQRYACAMGWVTVAIVEGDEQRLLELAATHALDLVLCWRTSDLPPAESLAQRLSVHRIDLLAVAQSCTALME*
Ga0070686_1008303991	3300005544	Switchgrass Rhizosphere	MHPGRPRRRPRVTVLYQPAPSPRRIAVYSSRPDSPLAANQLAAIQRYARGRGWLTVAIVGSDEQRLLELAATHAVDLVLCWRTSDLRDAEALVQGLSVHGIELLAVAQSCTALME*
Ga0070696_1014000791	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KQMFEALPPKKVWPVIEDMDHLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACGMGWATVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0068859_1015948721	3300005617	Switchgrass Rhizosphere	MIEDTDHPPASSTRRVAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTTDLRPAESLVQLLSAHRIELLAVAQSCTSLME*
Ga0068859_1025251411	3300005617	Switchgrass Rhizosphere	HWPLLLKLGPRKVSPMIEDTDPPPAPSPRRIAIYISRPDAPLAANQLAAIQRYACAMGWVTVAIVERDEQRLLELAATHALDLVLCWRTSDLRPAESLIHLLSVHRIELLAVAQSCTSLIE*
Ga0068866_101298062	3300005718	Miscanthus Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHSIELLAVAQSCTALME*
Ga0068866_111496671	3300005718	Miscanthus Rhizosphere	VWPMIEDTDHPPASSTRRIAIYISRPDSPWAANQLAAIQRYACGMGWVSVAIVESDEQLLLDLAAAHAIDLVLCWRTSDLRHAESLVRRLSAHRIDLLAVAQSCTALME*
Ga0068863_1023668301	3300005841	Switchgrass Rhizosphere	MSEDTDHPPASASSIRRIAIYISRPASPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHSIELLAVAQSCTALME*
Ga0068858_1006448892	3300005842	Switchgrass Rhizosphere	MIEDTDHPPASSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELPATHALDLVLCWRTTDLRPAESLVQLLSAHRIELLAVAQSCTSLME*
Ga0068860_1003895982	3300005843	Switchgrass Rhizosphere	VIEDMDHLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACNMGWVTVAIVESDEQRLLDLAATQALDLVLCWRASDLRPVELVQRLSVHGIELLAVAQSCTALME*
Ga0068862_1007549883	3300005844	Switchgrass Rhizosphere	PPAPSPRRIAIYISRPDAPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLEVAEMHALDLVLCWRTSDLRPAESLVQLLSVHGIELLAVAQSCTSLIE*
Ga0066652_1008323972	3300006046	Soil	MDHLAAPSVRCIAMYTSRPDSRLAANQLVAIQRYACGMGWVTVAIVETDEQRLLDLAATHPLDLALCWRISDLRHAESLVQRLSVHRIELLPVAQSCASLME*
Ga0070715_101114892	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGVELLAVAQSCTALME*
Ga0097621_10000393417	3300006237	Miscanthus Rhizosphere	VIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATRALDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTALME*
Ga0097621_1005117232	3300006237	Miscanthus Rhizosphere	MDHLPAPSTRRIAIYTSRPDSPWAANQLAAIQRYACGMGWVSVAIVESDEQLLLDLAAAHAIDLVLCWRTSELRHAESLVRRLSAHRIDLLAVAQSCTALME*
Ga0068871_1016384801	3300006358	Miscanthus Rhizosphere	VSGAVSRFQRPDDIHVEASPPKQAWPVIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQQLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTALME*
Ga0075421_1018469092	3300006845	Populus Rhizosphere	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRHAESLIQRLSVHSIALLAVAQSCTALME*
Ga0075433_1000150112	3300006852	Populus Rhizosphere	MDHLPALSTRRIAIYTSRPDSLLAANQLAAIQRYAGGMGWVTVAIVENDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSAYSIELLAVAQSCAALME*
Ga0075424_1000269704	3300006904	Populus Rhizosphere	VIEDMDHLPALSTRRIAIYTSRPDSLLAANQLAAIQRYAGGMGWVTVAIVENDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSAYSIELLAVAQSCAALME*
Ga0079216_106089571	3300006918	Agricultural Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHRIELLAVAQSCTALME*
Ga0079218_119141552	3300007004	Agricultural Soil	MDHLPATSTRRIAIYSSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHSIEILAVAQSCTALME*
Ga0111539_112406411	3300009094	Populus Rhizosphere	MIEDTDHPPPSSTRRIAIYISRPDSPLAANQLAAIQRYAGAMGWVTVAIVERDEQRLLELASMHALDLVLCWRTSDLRPAESLVQLLSVHSIELLAVAQSCTSLME*
Ga0111539_115322461	3300009094	Populus Rhizosphere	ISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME*
Ga0105245_110342172	3300009098	Miscanthus Rhizosphere	VAAQKVWPMIEDTNHPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQRLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE*
Ga0105245_116296411	3300009098	Miscanthus Rhizosphere	MSEDTDHPPASASSIRRIAIYSSRPASPLAANQLAAIQRYACNMGWVTVAIVESDEQRLLDLAATQALDLVLCWRASDLRPVELVQRLSVHGIELLAVAQSCTALME*
Ga0105247_102481413	3300009101	Switchgrass Rhizosphere	VAAQKVWPMIEDTNHPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMCWVTVAIVEGDEQRLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE*
Ga0114129_106777281	3300009147	Populus Rhizosphere	LAAQKVWPVIEDMDHLPAPSNRRIAIYTSRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME*
Ga0114129_122607961	3300009147	Populus Rhizosphere	VIEEMDHLPAPSTRRIAIYTSRPDSLLAANQLAAIQRYAGAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRADSLIQQLSVHCIELLAVAQSCTALME*
Ga0105242_117951891	3300009176	Miscanthus Rhizosphere	RRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQQLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE*
Ga0105248_103455612	3300009177	Switchgrass Rhizosphere	VSGAVSRFQRPDDIHVEASPPKQAWPVIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATRALDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTALME*
Ga0105248_111850921	3300009177	Switchgrass Rhizosphere	VAAQKVWPMIEDTNHPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQRLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLME*
Ga0105249_101003432	3300009553	Switchgrass Rhizosphere	MIEDTDPPPAPSPRRIAIYISRPDAPLAANQLAAIQRYACAMGWVTVAIVERDEQRLLELAATHALDLVLCWRTSDLRPAESLIHLLSVHRIELLAVAQSCTSLIE*
Ga0105249_117924302	3300009553	Switchgrass Rhizosphere	IDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVQSDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIELLAVAQSCTALME*
Ga0105259_11461451	3300009597	Soil	HPTTPSSRRIAIYISRPDSPLAANQLAAIHRYACAMGWVTVAIVESDEQRLLEVAATHAPDLVLCWRTSDLRPAESLVQRLSVHSIELLAVAQSCTALME*
Ga0105347_10457093	3300009609	Soil	MDHLPAPSTRRIAIYTPRPDSPLAANQLAAIQRYARAMGWVTVAIVESDEQRLLDLAATHALDLVVCWRTSDLRPAESLVQRLSIFRVELLAVAQSCSALME*
Ga0105340_13465041	3300009610	Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSVHSIELLAVAQSCTSLME*
Ga0105252_102827022	3300009678	Soil	VRLIDPGKPWQNGADEIEDMDHPPAPSTRRIAIYTSRPDSPFAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME*
Ga0134122_110008821	3300010400	Terrestrial Soil	SSPRRIAIYISRPDSSLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDRPAESLVQLLSVHSIELLAVAQSCTALME*
Ga0134121_103038633	3300010401	Terrestrial Soil	MDHLPAPSTRRIAIFTSRPDSPLAANQLAAIQRYACGMGWLTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIELLAVAQSCTALME*
Ga0134121_108675721	3300010401	Terrestrial Soil	VAAQKVWPMIEDTNHPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQQLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE*
Ga0134121_109412662	3300010401	Terrestrial Soil	RAPSTRRIAIYISRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHAVDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTALME*
Ga0134121_111738632	3300010401	Terrestrial Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACGMGWVSVAIVESDEQLLLDLAAAHAIDLVLCWRTSELRHAESLVRRLSAHRIDLLAVAQSCTALME*
Ga0134121_131563641	3300010401	Terrestrial Soil	RPDSPLAANQLAAIQRYAYAMGWVTVAIVKSDEQRLLELAATHALDLVLCWRTSDLRPAEALVQLLSAHRIELLAVAQSCTSLME*
Ga0134123_125774771	3300010403	Terrestrial Soil	VIEDMDHLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACNMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAESLVQRLSVHSIELLAVAQSCTSLME*
Ga0137313_10871152	3300011403	Soil	VRLIDPGKPWQNGADEIEDMDHPPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRLAESLVQRLSVHSIELLAVAQSCTALME*
Ga0137425_10746772	3300011422	Soil	VIEDMDHPSAPSARRIAIYTSRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHAFDLVLCWRTSDLRPAESLVQRLSVHNIELLALAQSCSALME*
Ga0137436_10332451	3300011423	Soil	RRLEDAKNMPMDPLPASSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDFRRAESLVQRLSAHSIELLAVAQSCTALME*
Ga0137428_11971431	3300011432	Soil	MDHLPAPSTRGIAIYTSRPDSPLAANQLAAIQRYARAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSMHSIELLAVAQSCTALME*
Ga0137464_10063493	3300011434	Soil	LRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDFRRAESLVQRLSAHSIELLAVAQSCTALME*
Ga0137426_12504421	3300011435	Soil	MDHLPAPSTRRIAIYTSRPDSPWAANQLAAIQRYAGAMGWTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSVHSIELLAVAQSCTALME*
Ga0137432_11258312	3300011439	Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDFRRAESLVQRLSAHSIELLAVAQSCTALME*
Ga0137427_101574282	3300011445	Soil	VIEDMDDLPAPSTRRIAIFISRPDSPLSANQLAAIQRYAGAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME*
Ga0137459_11463791	3300012228	Soil	LRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDFRRAESLVQRLSVHSIELLAVAQSCTALME*
Ga0137435_12022222	3300012232	Soil	VIEDMDHPPAPSTRRIAIYTSCPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDIRRAESLIQRLSVHSIELLAVAQSCTSLME*
Ga0157306_103754652	3300012912	Soil	VIEDMDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVERDEQRLLELAATHALDLVLCWRTSDLRPAESLPQRLAVHGIELLAVAQSCTSLME*
Ga0164302_101432332	3300012961	Soil	ANEFETGSGRTVTIQLHCQWPLMLKLGRQKFWPMIEDTDHPPVSSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAESLVQRLSVHRIELLAVAQSCTALME*
Ga0164309_109779781	3300012984	Soil	VEAWPPKKVWPVIEDMDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGIELLAVAQSCTALME*
Ga0163162_123528501	3300013306	Switchgrass Rhizosphere	RRIAIYISRPDSPWAANQLAAIQRHASAMGWVTVAIVESDEQRLIELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIELLAVAQSCTALME*
Ga0157375_135202711	3300013308	Miscanthus Rhizosphere	MDHLPAPSTRRIAIYTSRSDSLLAANQLAAIQRYACAMGCVTVAIVESDERRLLELAATHALDLVLCWRISDLRPADSLVQLLSGRSIELLAVAQSCTSLME*
Ga0163163_100177178	3300014325	Switchgrass Rhizosphere	MIEDTDHPPASSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQQLLELAATHALDLVLCWRTTDLRPAESLVQLLSAHRIELLAVAQSCTSLME*
Ga0157380_104181312	3300014326	Switchgrass Rhizosphere	MDHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVESDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME*
Ga0180088_10390832	3300014868	Soil	VRLIDPGKPWQNGADEIADMDHPPVPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIAESDEQPLLDLAATHALDLVLCWRTSELRRPESLVQRLSAHGVELLAVAQSCTALME*
Ga0180083_10930122	3300014875	Soil	VIEDTDHPTTPSSRRIAIYISRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSVHSIELLAVAQSCTALME*
Ga0180082_10915181	3300014880	Soil	LPPKKVWPVIEDMDHLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSVHSIELLAVAQSCTSLME*
Ga0157379_119960892	3300014968	Switchgrass Rhizosphere	MDHPPTPSTRRIAIYISRPDSPWAATQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHSIELLAVAQSCTALME*
Ga0157376_107124252	3300014969	Miscanthus Rhizosphere	VSGAVSRFQRPDDIHVEASPPKQAWPVIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGVELLAVAQSCTALME*
Ga0180093_11614791	3300015258	Soil	LTLYGFLRAPGRQYADFEAWPTKKGWPVIEDMDHLPAPSTRRIAIFISRPDSPLSANQLAAIQRYAGAMGWVTVAIVESDEQRLLDLAATHTLDLVLCWRTSDLRRAEFLVQRLSVHSIELLAVAQSCTALME*
Ga0132258_113467792	3300015371	Arabidopsis Rhizosphere	LPPKKAWPVIEEMDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGVELLAVAQSCTALME*
Ga0132258_113541462	3300015371	Arabidopsis Rhizosphere	MDHLPAQSTRRIAIYMSRPDSPLAANQLAAIQRYACGMGWVTVAKVESDEQRLLDLAATHAFDLVLCWRTSELRHAESLVQRLSVHSIELLAVAQSCTALME*
Ga0132256_1036015211	3300015372	Arabidopsis Rhizosphere	PAPSTRRIAIYTSRPDSPLAASQLAAIQRYARGMGWVTVAIVESDEQPLLDLAATHAFDLVLCWRTSDLRPAESLVQRLSVHRIELLAVAQSCSALME*
Ga0132257_1007183561	3300015373	Arabidopsis Rhizosphere	IAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESNEQRLLDLAATHALDLVLCWRTSDLRPAASLVQRLSVHGVELLAVAQSCTALME*
Ga0132255_1013357531	3300015374	Arabidopsis Rhizosphere	EVDHLRAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQRLLDLAATHALDLVLCWRTSELRPAASLVQRLSVHGVELLAVAQSCTALME*
Ga0132255_1029684602	3300015374	Arabidopsis Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDLRRAESLVHVLSVHRIELLAVAQSCTALME*
Ga0190266_101686671	3300017965	Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYAGARGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHDIELLAVAQSCTALME
Ga0184628_102614232	3300018083	Groundwater Sediment	MDHLPAPSTRRIAIFISRPDSPLSANQLAAIQRYAGAMGWTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAEFLVQRLSVHNIELLPLAQSCSALME
Ga0190272_119833131	3300018429	Soil	QVSTPLGDVADLNDMGSSPQVNLDWPMIEDTDHPPAPSPRRIAIYISRPDSPLAANQLAAIQRYACGMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAESLVRLLSVHSIELLAVAQSCTALME
Ga0190270_124114462	3300018469	Soil	MDHLPAPSTRRIAIFISRPDSPLSANQLAAIQRYAGAMGWVTVAIVESDEQRLLDLAATHTLDLVLCWRTSDLRRAEFLVQRLSVHNIELLALAQSCSALME
Ga0190270_133036531	3300018469	Soil	PDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAEFLVQRLSVHSIELLAVAQSCTALME
Ga0190274_136114421	3300018476	Soil	LDMDHLPAPSTRRIAIYTPRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHRIELLALAQSCSALME
Ga0210380_101618482	3300021082	Groundwater Sediment	MDDLPAPSTRRIAIYISRPDSPLAANQLAAIQRYAGAMGWVTVAIVESDAQRLLDLAATHSLDLVLCWRTSDLRPAESLIQRLSVHSTNFWQWRRAARL
Ga0207642_101342772	3300025899	Miscanthus Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHSIELLAVAQSCTALME
Ga0207710_101398071	3300025900	Switchgrass Rhizosphere	MIEDTNHPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQRLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE
Ga0207663_104983201	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PESSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDLRPNESLVQVLSVHSVELLAVAQSCTSLME
Ga0207687_100902402	3300025927	Miscanthus Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIELLAVAQSCTALME
Ga0207701_104088082	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LPAPSTRRIAIYTSRPDSLLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0207701_117240041	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GWKNTNEDRVRTRLISQSAGLAAWKVWPVIKDMDHLAAPSIRRIAIYTSRPDSPWAANQLAAIQRYAGAMGWMTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVRQLSAHRIELLAVAQSCAALME
Ga0207686_110648722	3300025934	Miscanthus Rhizosphere	IAIYTSRPDSPWAANQLAAIQRYACGMGWVSVAIVESDEQLLLDLAAAHAIDLVLCWRTSELRHAESLVRRLSAHRIDLLAVAQSCTALME
Ga0207670_111730682	3300025936	Switchgrass Rhizosphere	MASTRRIAIYTSRPDSLLAANQLAAIQRYACAMGWVTVAIVEGDEQRLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELL
Ga0207704_102744681	3300025938	Miscanthus Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHSIELLAVAQS
Ga0207691_113655022	3300025940	Miscanthus Rhizosphere	AIYISRPDSPWAANQLAAIQRYACAMGWVTVAIVEGDEQRLLELAATHALDLVLCWRTSDLPPAESLAQRLSVHRIDLLAVAQSCTALME
Ga0207640_116648661	3300025981	Corn Rhizosphere	AAQKVWPMIEDTDHPPAPSPRRIAIYTSCPDAPLAANQLAAIQRYACAMGWVTVAIVERDEQRLLELAATHALDLVLCWRTSDLRPAESLIHLLSVHRIELLAVAQSCTSLIE
Ga0207658_115531642	3300025986	Switchgrass Rhizosphere	MDHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYACAMGWVTVANMESDEQRLLDLAATHALDLVLCWRTSDLRRAESLIQRLSVHSIELLAVAQSCTALME
Ga0207703_101464943	3300026035	Switchgrass Rhizosphere	HPPAPSPRRIAIYISRPDSPLAANQLAAIERYACAMGWVTVAIVEGDEQQLLEVAATHALDLVLCWRTSDFRPAESLVQLLSVHRIELLAVAQSCTSLIE
Ga0207678_103858572	3300026067	Corn Rhizosphere	MDHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVESDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME
Ga0207641_111983102	3300026088	Switchgrass Rhizosphere	MIEDTDHPPALSTRRVAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME
Ga0207648_111123542	3300026089	Miscanthus Rhizosphere	ESPLAANQLAAIQRYACAMGWVTMAIVESDEQRLLDLAATHALDVVLCWRTSDLRPAESLVQRLSVHSIELLAVAQSCTALME
Ga0207675_1012334102	3300026118	Switchgrass Rhizosphere	VEAWPPKKVWPVIEDMDHLPASSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLEVAEMHALDLVLCWRTSDLPPAESLVQLLSVHGIELLAVAQSCTALME
Ga0208685_10422291	3300027513	Soil	PERLDMDHLPAPSTRRIAIYTPRPDSPLAANQLAAIQRYARAMGWVTVAIVESDEQRLLDLAATHALDLVVCWRTSDLRPAESLVQRLSIFRVELLAVAQSCSALME
Ga0209999_11208642	3300027543	Arabidopsis Thaliana Rhizosphere	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLVATHALDLVLCWRTSDLRRAESLVQRLSEQSIELLAVAQSCTALME
Ga0209811_100022631	3300027821	Surface Soil	MIEETDHPPESSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPNESLVQVLSVHSVELLAVAQSCTSLME
Ga0209974_101024032	3300027876	Arabidopsis Thaliana Rhizosphere	VIEDMDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLVATHALDLVLCWRTSDLRRAESLVQRLSEQSIELLAVAQSCTALME
Ga0209486_108712692	3300027886	Agricultural Soil	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHSIEILAVAQSCTALME
Ga0207428_107118271	3300027907	Populus Rhizosphere	MDHLPALSTRRIAIYTSRPDSLLAANQLAAIQRYAGGMGWVTVAIVENDEQRLLDLAATHALDLVLCWRTSDLRHAESLVQRLSAYSIELLAVAQSCAALME
Ga0268265_106384293	3300028380	Switchgrass Rhizosphere	EDTDHPPAPSPRRIAIYISCPDAPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLEVAEMHALDLVLCWRTSDLRPAESLVQLLSVHGIELLAVAQSCTSLIE
Ga0268264_100951242	3300028381	Switchgrass Rhizosphere	MDHLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACNMGWVTVAIVESDEQRLLDLAATQALDLVLCWRASDLRPVELVQRLSVHGIELLAVAQSCTALME
Ga0268264_120265932	3300028381	Switchgrass Rhizosphere	MIDDTDHSPASSPRRIAIYISRPDSPWAANQLAAIQRYASAMGWVTVAIVESDEQRLLELAATHAFDLVLCWRTSDLRRAESLVHVLSVHGIEL
Ga0247824_102424972	3300028809	Soil	MDHLPMASTRRIAIYTSRPDSLLAANQLAAIQRYASAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0247825_107540592	3300028812	Soil	TRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLPPAESLVQRLSVHSIELLAVAQSCTSLME
Ga0247659_11766832	3300030600	Soil	FFFFRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPVESLVQRLSVHSIELLAVAQSCSALME
Ga0310888_100432422	3300031538	Soil	VIEDMDHLPPPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0310886_102012752	3300031562	Soil	MDHLPPPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLPPAESLVQRLSVHSIELLAVAQSCTALME
Ga0307469_107539702	3300031720	Hardwood Forest Soil	VLSLAIGTCWNEDMDRLPAPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAESLPQRLSVHGIELLAVAQSCTSLME
Ga0310900_100456596	3300031908	Soil	SRPDSLLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0310901_100263202	3300031940	Soil	MDHLPPPSTRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME
Ga0310884_105247083	3300031944	Soil	KVWPVIEDMDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHSIELLAVAQSCTALME
Ga0310903_106013921	3300032000	Soil	RRTDVAGGIRSGRVIEAQKIWPVIEDMDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYAGAMGWVTVAIVDSDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0310902_105122362	3300032012	Soil	MDHLTMASTRRIAIYTSSPDSLLAANQLAAIQRYASAMGWVTVAIVEGDEQRLLDLAATHAIDLVLCWRTSDLRRAEFLVQRLSVHSIDLLAVAQSCTALME
Ga0310902_113473511	3300032012	Soil	VAAQKVWAVIEDMDHLPAPSTRRIAIYISRPESPLAANQLAAIQRYACAMGWVTMAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQ
Ga0310906_110065961	3300032013	Soil	SRSDSSLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0310899_101708362	3300032017	Soil	VAAQKVWAVIEDMDHLPAPSTRRIAIYISRPESPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAESLVQRLSEHSIELLAVAQSCTALME
Ga0307471_1008640852	3300032180	Hardwood Forest Soil	MAAAAGRHDGNRMIEDTDHPPAPSPRRIAIYISRPDSPLAANQLAAIQRYACAMGWVTVAIVESDEQRLLELAATHALDLVLCWRTSDLRPAESLVQRLSVHSIELLAVAQSCTSLME
Ga0307471_1043593191	3300032180	Hardwood Forest Soil	IAIYISRPNSPLAANQLAAIQRYARAMGWVTVAIVESNEKRLLELAATHALDLVLCWRTSDLRPAEPLVQLLSEHRIELLAVAQSCTALME
Ga0326726_101566192	3300033433	Peat Soil	VIEAMDHLPAPSTRRIAIYTSRTDSPLAANQLAAIQRYAGAMGWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRPAESLVQRLSVHRIELLAVAQSCTALME
Ga0247830_116493191	3300033551	Soil	RIAIYTSRPDSPLAANQLAAIQRYACAMGWVTVAIVESDKQPLLDLAATHALDLVLCWRTSDIRRAESLVQRLSVHSIELLAVAQSCTALME
Ga0364945_0107349_95_403	3300034115	Sediment	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIHRYACAMGWVTVAIVESDEQRLLEVAATHAPDLVLCWRTSDLRPAESLVQLLSVHRIELLAVAQSCSSLIE
Ga0364925_0124223_565_873	3300034147	Sediment	MDHLPAPSTRRIAIYTSRPDSPLAANQLAAIQRYACAMDWVTVAIVESDEQRLLDLAATHALDLVLCWRTSDLRRAEFLVQRLSVHNIELLALAQSCSALME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052235

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences