Metagenome / Metatranscriptome Family F052493

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052493
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	78 residues
Representative Sequence	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLEQALSQGKK
Number of Associated Samples	112
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.43 %
% of genes near scaffold ends (potentially truncated)	32.39 %
% of genes from short scaffolds (< 2000 bps)	77.46 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.958 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.197 % of family members)
Environment Ontology (ENVO)	Unclassified (28.873 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 92.31% β-sheet: 0.00% Coil/Unstructured: 7.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00691	OmpA	33.10
PF12802	MarR_2	21.13
PF00202	Aminotran_3	5.63
PF01936	NYN	2.11
PF03972	MmgE_PrpD	1.41
PF00920	ILVD_EDD	0.70
PF02153	PDH_N	0.70
PF02621	VitK2_biosynth	0.70
PF03186	CobD_Cbib	0.70
PF03279	Lip_A_acyltrans	0.70
PF12006	DUF3500	0.70
PF04392	ABC_sub_bind	0.70
PF13463	HTH_27	0.70
PF00296	Bac_luciferase	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	2.11
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.41
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.41
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.70
COG1270	Cobalamin biosynthesis protein CobD/CbiB	Coenzyme transport and metabolism [H]	0.70
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.70
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.70
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.70
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.70
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.96 %
Unclassified	root	N/A	7.04 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	39.44 %
Unclassified	root	N/A	7.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.41 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	39.44 %
Unclassified	root	N/A	7.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	39.44 %
Unclassified	root	N/A	7.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	30.28 %
Unclassified	root	N/A	7.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	30.28 %
Unclassified	root	N/A	7.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.41 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0904078	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0572338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1061	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100654218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300000550\|F24TB_10675778	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300002562\|JGI25382J37095_10275172	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300002908\|JGI25382J43887_10042180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2481	Open in IMG/M
3300002912\|JGI25386J43895_10150776	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300004114\|Ga0062593_101735874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300004267\|Ga0066396_10077590	Not Available	581	Open in IMG/M
3300004633\|Ga0066395_10001891	All Organisms → cellular organisms → Bacteria	7280	Open in IMG/M
3300005167\|Ga0066672_10072331	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300005171\|Ga0066677_10055224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1997	Open in IMG/M
3300005171\|Ga0066677_10366297	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300005174\|Ga0066680_10276836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1069	Open in IMG/M
3300005176\|Ga0066679_10394768	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005178\|Ga0066688_10873894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300005180\|Ga0066685_10001975	All Organisms → cellular organisms → Bacteria	9316	Open in IMG/M
3300005186\|Ga0066676_10353590	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005332\|Ga0066388_100745857	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300005332\|Ga0066388_101017415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1390	Open in IMG/M
3300005332\|Ga0066388_101361174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1229	Open in IMG/M
3300005332\|Ga0066388_102919487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300005353\|Ga0070669_101587467	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005445\|Ga0070708_100115830	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300005446\|Ga0066686_10000044	All Organisms → cellular organisms → Bacteria	26727	Open in IMG/M
3300005450\|Ga0066682_10094268	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300005451\|Ga0066681_10928660	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005459\|Ga0068867_101031363	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005558\|Ga0066698_10026694	All Organisms → cellular organisms → Bacteria	3454	Open in IMG/M
3300005561\|Ga0066699_10163173	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300005568\|Ga0066703_10207534	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005713\|Ga0066905_100271654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1315	Open in IMG/M
3300005713\|Ga0066905_100813408	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005764\|Ga0066903_100125904	All Organisms → cellular organisms → Bacteria	3582	Open in IMG/M
3300005841\|Ga0068863_100960637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300006796\|Ga0066665_10920445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300006797\|Ga0066659_10829197	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300006847\|Ga0075431_101441883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300006847\|Ga0075431_101448185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300006852\|Ga0075433_10081026	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300006852\|Ga0075433_10920103	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300006854\|Ga0075425_100724531	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300006854\|Ga0075425_101282244	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300006871\|Ga0075434_101570835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300007255\|Ga0099791_10113293	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300007255\|Ga0099791_10358745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	699	Open in IMG/M
3300007258\|Ga0099793_10275489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300009147\|Ga0114129_10197974	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300009553\|Ga0105249_10399830	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300009792\|Ga0126374_10839039	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010046\|Ga0126384_10213165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1537	Open in IMG/M
3300010047\|Ga0126382_10155439	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300010047\|Ga0126382_10200975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1418	Open in IMG/M
3300010047\|Ga0126382_10625520	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300010359\|Ga0126376_10149519	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300010360\|Ga0126372_10282945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1446	Open in IMG/M
3300010360\|Ga0126372_11065367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300010362\|Ga0126377_11363481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	782	Open in IMG/M
3300010362\|Ga0126377_11409230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	770	Open in IMG/M
3300010362\|Ga0126377_12657324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300010362\|Ga0126377_13296714	Not Available	522	Open in IMG/M
3300010366\|Ga0126379_11766031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	723	Open in IMG/M
3300010376\|Ga0126381_100321199	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300010398\|Ga0126383_13047678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300012199\|Ga0137383_10457120	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	935	Open in IMG/M
3300012200\|Ga0137382_10278471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1164	Open in IMG/M
3300012200\|Ga0137382_10936790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300012202\|Ga0137363_10564438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	959	Open in IMG/M
3300012203\|Ga0137399_10143707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1898	Open in IMG/M
3300012203\|Ga0137399_10555202	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300012205\|Ga0137362_10015205	All Organisms → cellular organisms → Bacteria → Proteobacteria	5784	Open in IMG/M
3300012210\|Ga0137378_11425105	Not Available	606	Open in IMG/M
3300012397\|Ga0134056_1075019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300012582\|Ga0137358_10934684	Not Available	566	Open in IMG/M
3300012918\|Ga0137396_10001686	All Organisms → cellular organisms → Bacteria	11828	Open in IMG/M
3300012922\|Ga0137394_10620068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300012922\|Ga0137394_10883107	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300012927\|Ga0137416_10092064	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300012929\|Ga0137404_10071820	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300012944\|Ga0137410_10250026	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300012971\|Ga0126369_10312902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1576	Open in IMG/M
3300012971\|Ga0126369_10380204	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300014150\|Ga0134081_10371768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300015371\|Ga0132258_13621195	Not Available	1056	Open in IMG/M
3300015373\|Ga0132257_100019146	All Organisms → cellular organisms → Bacteria → Proteobacteria	7166	Open in IMG/M
3300016319\|Ga0182033_10122099	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300017939\|Ga0187775_10089704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1014	Open in IMG/M
3300017966\|Ga0187776_10002379	All Organisms → cellular organisms → Bacteria	9599	Open in IMG/M
3300018431\|Ga0066655_10177733	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300018431\|Ga0066655_10238718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1152	Open in IMG/M
3300018431\|Ga0066655_10759292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300018468\|Ga0066662_10777548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	926	Open in IMG/M
3300019789\|Ga0137408_1150577	All Organisms → cellular organisms → Bacteria → Proteobacteria	5819	Open in IMG/M
3300020004\|Ga0193755_1219450	Not Available	530	Open in IMG/M
3300021560\|Ga0126371_11501556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	802	Open in IMG/M
3300025910\|Ga0207684_10086044	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300025942\|Ga0207689_11205781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300026088\|Ga0207641_12488465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300026118\|Ga0207675_100377025	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300026297\|Ga0209237_1009441	All Organisms → cellular organisms → Bacteria → Proteobacteria	5839	Open in IMG/M
3300026309\|Ga0209055_1006056	All Organisms → cellular organisms → Bacteria	6883	Open in IMG/M
3300026317\|Ga0209154_1019939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3151	Open in IMG/M
3300026324\|Ga0209470_1000071	All Organisms → cellular organisms → Bacteria	67457	Open in IMG/M
3300026536\|Ga0209058_1000158	All Organisms → cellular organisms → Bacteria	52059	Open in IMG/M
3300026540\|Ga0209376_1348498	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300026542\|Ga0209805_1071638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1686	Open in IMG/M
3300027527\|Ga0209684_1003262	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300027646\|Ga0209466_1003799	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300028536\|Ga0137415_10016665	All Organisms → cellular organisms → Bacteria	7282	Open in IMG/M
3300031198\|Ga0307500_10210223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300031543\|Ga0318516_10306380	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300031543\|Ga0318516_10421175	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031546\|Ga0318538_10514639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	649	Open in IMG/M
3300031561\|Ga0318528_10090438	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300031719\|Ga0306917_10102275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2058	Open in IMG/M
3300031720\|Ga0307469_10037894	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300031720\|Ga0307469_10088652	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300031720\|Ga0307469_10193330	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300031720\|Ga0307469_12264979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300031724\|Ga0318500_10595694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	560	Open in IMG/M
3300031740\|Ga0307468_100065262	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1990	Open in IMG/M
3300031740\|Ga0307468_100783936	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031747\|Ga0318502_10370946	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300031764\|Ga0318535_10082929	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300031765\|Ga0318554_10800957	Not Available	527	Open in IMG/M
3300031768\|Ga0318509_10306697	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300031770\|Ga0318521_10615835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	657	Open in IMG/M
3300031796\|Ga0318576_10426709	Not Available	626	Open in IMG/M
3300031798\|Ga0318523_10393451	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031820\|Ga0307473_10176504	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300031820\|Ga0307473_10253259	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1081	Open in IMG/M
3300031820\|Ga0307473_10767266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300031910\|Ga0306923_11199320	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031947\|Ga0310909_10959920	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300032009\|Ga0318563_10414655	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	729	Open in IMG/M
3300032090\|Ga0318518_10268540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	876	Open in IMG/M
3300032180\|Ga0307471_100293913	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300032180\|Ga0307471_100357591	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1573	Open in IMG/M
3300032180\|Ga0307471_100544317	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300032261\|Ga0306920_102940187	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.32%
Host-Associated	Host-Associated	12.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.32%
Plants	Host-Associated → Plants	12.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.65%
Loam	Environmental → Terrestrial → Soil → Loam	11.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09040781	2228664022	Soil	MTRIVAIAIGAALVGALAGFLWWGTAANRLRDEVRALQNQQADTNAALKGLEAKLKKTEEELQSERERRARLELTLSQGRK
ICChiseqgaiiDRAFT_05723382	3300000033	Soil	MTRIVAIAIGAALVGALAGFLWWGTAANRLRDEVRALQNQQADTNAALKGLEAKLKKTEEELQSERERRARLELTLSQGRK*
INPhiseqgaiiFebDRAFT_1006542181	3300000364	Soil	LTTRXXAIGVGALLVGVLGGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
F24TB_106757782	3300000550	Soil	MTRIIAVAVGAALVGALAGFLWWGTAANRLRDEVRGLQNQQADTNAALKGLEAKLKKTEEELQSERERRARLELTLSQGRK*
JGI25382J37095_102751721	3300002562	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
JGI25382J43887_100421803	3300002908	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRAVQTQKADELKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
JGI25386J43895_101507761	3300002912	Grasslands Soil	IAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0062593_1017358743	3300004114	Soil	LTTRVIAIGVGALLVGVLGGFLWWGTSANRLRDEVRALQNQQADADGALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0066396_100775901	3300004267	Tropical Forest Soil	VMTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0066395_100018914	3300004633	Tropical Forest Soil	MARIIAIAIGAAAVGVLAGFLWWGTAANRLRDEIRTVQNQLGDEIKALQTKLKKTEDELQSERDRRARLEQALSQGKK*
Ga0066672_100723313	3300005167	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066677_100552244	3300005171	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRTDEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066677_103662972	3300005171	Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLEQALSQGKK*
Ga0066680_102768363	3300005174	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQ
Ga0066679_103947681	3300005176	Soil	MRRMIGIGVGAAIVGVLAGFLWWGTAANRLRDEVRALQNQQADADAALKGMQSKLKKTEEELQSERERRARLELVISQGRK*
Ga0066688_108738941	3300005178	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRTDEVKGLQDKLKKTEEELQSERERRGR
Ga0066685_1000197511	3300005180	Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEIKALDAKLKKTEEELQSERERRLRLEQALSQGKK*
Ga0066676_103535902	3300005186	Soil	LTTRVIAIGVGALLAGVLAGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0066388_1007458572	3300005332	Tropical Forest Soil	VMTRMIAIGVGAAVVGLLAGFLWWGTSANRLRDELRAVQTRQADELGALQNKLKKTEEELLSERERRARLEQALSEGKK*
Ga0066388_1010174152	3300005332	Tropical Forest Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISEGRK*
Ga0066388_1013611741	3300005332	Tropical Forest Soil	VMTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRAR
Ga0066388_1029194871	3300005332	Tropical Forest Soil	VMTRMIAIAVGAAVVGVLAGFLWWGTSANRLRDELRAQQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0070669_1015874671	3300005353	Switchgrass Rhizosphere	LTTQVITIEMGALLVGVLTEFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISE
Ga0070708_1001158303	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VMTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRAVQTQKADELKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066686_1000004422	3300005446	Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEVKALDAKLKKTEEELQSERERRLRLEQALSQGKK*
Ga0066682_100942683	3300005450	Soil	AVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLEQALSQGKK*
Ga0066681_109286602	3300005451	Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLE
Ga0068867_1010313631	3300005459	Miscanthus Rhizosphere	LTTRVIAIGVGALLVGALGGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0066698_100266942	3300005558	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQQADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066699_101631733	3300005561	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQDKK*
Ga0066703_102075341	3300005568	Soil	LAVGVLAGFLWWGTAANRTRDELRALQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066905_1002716543	3300005713	Tropical Forest Soil	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLGDELRTVQNQLGDEIKALQTKLKKTEDELQSERDRRARLEQALSQGKK*
Ga0066905_1008134082	3300005713	Tropical Forest Soil	VMTRMIAIAVGAALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0066903_1001259045	3300005764	Tropical Forest Soil	VMTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAAQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0068863_1009606373	3300005841	Switchgrass Rhizosphere	LTTRVIAIGVGALLVGVLGGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0066665_109204453	3300006796	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0066659_108291972	3300006797	Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLEQALSQGK
Ga0075428_1027208741	3300006844	Populus Rhizosphere	GFLWWGTAANRLRDEVRALQNQQADTNAALKGLEAKLKKTEEELQSERERRARLELTLSQGRK*
Ga0075431_1014418831	3300006847	Populus Rhizosphere	MTRIVAIAIGAALVGALVGFLWWGTAANRLRDEVRALQNQQADTNAALKGLEAKLKKTEEELQSERERRARLEQALSQGKK*
Ga0075431_1014481852	3300006847	Populus Rhizosphere	GTAANRLRDDVRALQNRQADADATLKDVQGKLKKTEDELQVERERRARLELVLSQGRK*
Ga0075433_100810264	3300006852	Populus Rhizosphere	LTTRVIAIGVGALVVGVLAGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQGERERRARLELVISEGRK*
Ga0075433_109201032	3300006852	Populus Rhizosphere	GVLAGFLWWGTAANRLRDEMQALRNQQADTDAALKGLQAKLKKTEEELQSERERRARLELVISEGRK*
Ga0075425_1007245312	3300006854	Populus Rhizosphere	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTEKADELKGLQDKLKKTEEELQSERERRGRLEQALSQGKK*
Ga0075425_1012822442	3300006854	Populus Rhizosphere	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTVQNQLGDEIKALQTKLKKTEDELQSERERRARLEQALSQGKK*
Ga0075434_1015708351	3300006871	Populus Rhizosphere	MTRLIAIAVGAAIVGVLAGFLWWGTAANRLRDDVRALQNRQADADAALKDVQAKLKKTEDELQVERERRARLELVISQGRK*
Ga0099791_101132932	3300007255	Vadose Zone Soil	MGGVRRRGGSRLMTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDELRTIQNQQGDEIKTLQAKLKKTEEELQSERDRRARLEQALSQGKK*
Ga0099791_103587452	3300007255	Vadose Zone Soil	MARMIAIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRTRLEQVLSEGKK*
Ga0099793_102754891	3300007258	Vadose Zone Soil	MIGIGVGAAIVGVLAGFLWWGTAANRLHDEVRALQNQQADADAALKGMQSKLKKTEEELQSERERRARLELVISQGRK*
Ga0114129_101979743	3300009147	Populus Rhizosphere	MTRIIAVAVGAALVGALAGFLWWGTAANRLRDEVRGLQNQQADTNAALKGLEAKLKKTEEELQSERERRARLELALSQGKK*
Ga0105249_103998301	3300009553	Switchgrass Rhizosphere	TLTTRVIAIGVGALLVGVLGGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0126374_108390392	3300009792	Tropical Forest Soil	MTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAQQTRQADELGALQSKLKKAEEELQSERERRARLEQAL
Ga0126384_102131652	3300010046	Tropical Forest Soil	MTRMIAIAVGAALAGVLGGFLWWGTTANRLRDELRAAQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0126382_101554393	3300010047	Tropical Forest Soil	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLGDELRTVQNQLGDEIKALQAKLKKTEDELQSERDRRARLEQALSQGKK*
Ga0126382_102009751	3300010047	Tropical Forest Soil	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLRDELRTVQNQLGDEIKALQTKLKKTEDELQSERDRRARLEQALSQGKK*
Ga0126382_106255202	3300010047	Tropical Forest Soil	MTRMIAIAVGAALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0126376_101495191	3300010359	Tropical Forest Soil	MTRMIAIAVGAALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALHSKLKKTEEELQTERER
Ga0126372_102829452	3300010360	Tropical Forest Soil	MARIIAMAVGAAAVGVLAGFLLWGTAANRLRDEIRTIQNQLGDEIKALQTKLKKTEDELQSERDRRARLEQALSQGKK*
Ga0126372_110653672	3300010360	Tropical Forest Soil	MTRMIAIAVGAAVVGLLTGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0126377_113634811	3300010362	Tropical Forest Soil	ALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALQSKLKKTEEELQTERERRARLEQALSEGKK*
Ga0126377_114092302	3300010362	Tropical Forest Soil	MTRIIAIAVGAAVVGVLVGFLWWGTAANRLRDEIRTVQNQLGDEIKALQTKLKKTEDELQSERERRARLEQALSQGKK*
Ga0126377_126573242	3300010362	Tropical Forest Soil	AGFLWWGTAANRLRDEMQALRNQQADTDATLKGLQAKLKKTEEELQSERERRARLELVISEGRK*
Ga0126377_132967142	3300010362	Tropical Forest Soil	MTRMIAIAVGAALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALQSKLKKTEEELQSERERRARL
Ga0126379_117660311	3300010366	Tropical Forest Soil	MIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAAQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0126381_1003211993	3300010376	Tropical Forest Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK*
Ga0126383_130476782	3300010398	Tropical Forest Soil	IAIAVGAALAGVLGGFLWWGTSANRLRDELRAAQTRQADELNALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0137383_104571202	3300012199	Vadose Zone Soil	LATRVIAIGVGALLAGVLAGFLWWGMSANRLRDEVRALQNQQADADAALKGPQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0137382_102784713	3300012200	Vadose Zone Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRL
Ga0137382_109367902	3300012200	Vadose Zone Soil	IAIGVGALLVGVLGGFLWWGTSANRLRDDVRALQNQQADADAALKGMQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0137363_105644381	3300012202	Vadose Zone Soil	GFLWWGTAANRLRDEVRALQNQQADADTTLKGVQSKLKKTEEELQSERERRARLELVLSQGRK*
Ga0137399_101437073	3300012203	Vadose Zone Soil	MTRMIGIGVGAAVVGVLAGFLWWGTAANRLHDEVRALQNQQADADAALKGMQSKLKKTEEELQSERERRARLELVISQGRK*
Ga0137399_105552022	3300012203	Vadose Zone Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDELRTIQNQQGDEIKTLQAKLKKTEEELQSERDRRARLEQALSQGKK*
Ga0137362_100152057	3300012205	Vadose Zone Soil	MARMIAIGVGAAIVGVLAGFLWWGTAANRLRDEVRALQNQQADADTTLKGVQSKLKKTEEELQSERERRARLELVLSQGRK*
Ga0137378_114251051	3300012210	Vadose Zone Soil	LTTRVIAIGVGALLAGVLAGFLWWGMSANRLRDEVRALQNQQADADAALKGPQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0134056_10750191	3300012397	Grasslands Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEIKALDAKLKKTEEELQSERERRLRLEQALSQ
Ga0137358_109346842	3300012582	Vadose Zone Soil	MIGIGVGAAIVGVRGGFLWWGTAANRLRDGVRALQNQQADADAALKGMQSKLKKTEEELQSERERRARLELVISQGRK*
Ga0137396_100016868	3300012918	Vadose Zone Soil	MTRMIGIGVGAAIVGVLAGFLWWGTAANRLHDEVRALQNQQADADAALKGMQSKLKKTEEELQSERERRARLELVISQGRK*
Ga0137394_106200681	3300012922	Vadose Zone Soil	FMARMIAIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRARLEQALSEGKK*
Ga0137394_108831071	3300012922	Vadose Zone Soil	RVPDGGEGEPTLTTRVIAIGVGALLAGVLAGFLWWGMSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0137416_100920641	3300012927	Vadose Zone Soil	MTRMIGIGVGAAIVGVLAGFLWWGTAANRLHDEVRALQNQQADADAALKGMLSKLKKTEEELQSERERRARLELVISQGRK*
Ga0137404_100718205	3300012929	Vadose Zone Soil	MARMIAIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRARLEQALSEGKK*
Ga0137410_102500263	3300012944	Vadose Zone Soil	LTTRVIAIGVGALLAGVLAGFLWWGMSANRLRDEVRALQNQQADADAALKGMQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0126369_103129023	3300012971	Tropical Forest Soil	MTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRAAQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK*
Ga0126369_103802043	3300012971	Tropical Forest Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRSLQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISGGRK*
Ga0134081_103717681	3300014150	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQKADEVKGLQDKLKKTEEELQSERERRGRL
Ga0132258_136211952	3300015371	Arabidopsis Rhizosphere	LTTRVIAIGVGALLAGVLAGFLWWGTSANRLRDEVRALQNQQADADATLKGLQTKLKKTEEELQSERERRARLELVISEGRK*
Ga0132257_1000191468	3300015373	Arabidopsis Rhizosphere	GVLAGFLWWGTAANRLRDEMQTLRNQQADTDAALKGLQAKLKKTEEELQSERERRARLELVISEGRK*
Ga0182033_101220993	3300016319	Soil	AIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0187775_100897043	3300017939	Tropical Peatland	DLMPRLIAIGVGALLIGVLVGFLWWGTAANRLRDDIRALQNQQADAAGELKNLQTKLKKTEEELQAERERRERLELVISQGRK
Ga0187776_100023794	3300017966	Tropical Peatland	MPRLIAIGVGALLIGVLVGFLWWGTAANRLRDDIRALQNQQADAAGELKNLQTKLKKTEEELQAERERRERLELVISQGRK
Ga0066655_101777332	3300018431	Grasslands Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQAKLKKTEEELQSERERRARLEQALSQGKK
Ga0066655_102387181	3300018431	Grasslands Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEIKALDAKLKKTEEELQSERERRLRLEQALSQRKK
Ga0066655_107592922	3300018431	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0066662_107775481	3300018468	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRAVQTQKADELKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0137408_11505775	3300019789	Vadose Zone Soil	MARMIAIGVGAAIVGVLAGFLWWGTAANRLRDEVRALQNQQADADTTLKGVQSKLKKTEEELQSERERRARLELVLSQGRK
Ga0193755_12194501	3300020004	Soil	LTTRVIAIGVGALLLGVLGGFLWWGTSANRLRDEVRALQSQQADADTALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0126371_115015562	3300021560	Tropical Forest Soil	VLGGFLWWGTMANRLRDEVRSLQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISGGRK
Ga0207684_100860445	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQRADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0207689_112057811	3300025942	Miscanthus Rhizosphere	LTTRVIAIGVGALLVGVLGGFLWWGTSANRLRDEVRALQNQQADADGALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0207641_124884651	3300026088	Switchgrass Rhizosphere	VLAGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0207675_1003770253	3300026118	Switchgrass Rhizosphere	GFLWWGTSANRLRDEVRALQNQQADADGALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0209237_10094415	3300026297	Grasslands Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0209055_10060564	3300026309	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQRTDEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0209154_10199393	3300026317	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0209470_100007159	3300026324	Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEIKALDAKLKKTEEELQSERERRLRLEQALSQGKK
Ga0209058_100015850	3300026536	Soil	MTRMIAMAVGAAVIGVLAGFLWWGTATNRLRDEVRTLQNRHGDEVKALDAKLKKTEEELQSERERRLRLEQALSQGKK
Ga0209376_13484982	3300026540	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRALQTQQADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGKK
Ga0209805_10716383	3300026542	Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQKADEVKGLQDKLKKTEEELQSERERRGRLEQALSQDKK
Ga0209684_10032624	3300027527	Tropical Forest Soil	VMTRMIAIAVGAAVVGLLAGFLWWGTSANRLRDELRDLQTRHADELGALQNKLKKTEEELQSERERRARLEQALSEGKK
Ga0209466_10037994	3300027646	Tropical Forest Soil	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLGDELRTVQNQLGDEIKALQTKLKKTEDELQSERDRRARLEQALSQGKK
Ga0137415_100166657	3300028536	Vadose Zone Soil	MTRMIGIGVGAAIVGVLAGFLWWGTAANRLHDEVRALQNQQADADAALKGMLSKLKKTEEELQSERERRARLELVISQGRK
Ga0307500_102102231	3300031198	Soil	LTTRVIAIGVGALLVGVLGGFLWWGTAANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0318516_103063803	3300031543	Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISEG
Ga0318516_104211751	3300031543	Soil	VMTRMIAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0318538_105146391	3300031546	Soil	VGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0318528_100904383	3300031561	Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADGELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0306917_101022755	3300031719	Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADTDAELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0307469_100378942	3300031720	Hardwood Forest Soil	MARMIGIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADDVKGLQAKLKKTEEELQSERDRRARLEQALSEGKK
Ga0307469_100886521	3300031720	Hardwood Forest Soil	MTRMIAIAVGAAVVGVLAGFLWWGTAANRLRDELRTIQNQQGDEIKALQTKLKKTEEELQSERDRRARLEQALSQGKK
Ga0307469_101933303	3300031720	Hardwood Forest Soil	VGVLAGFLWWGTAANRLRDEIRTVQNQLGDEIKALQTKLKKTEDELQSERERRARLEQALSQGKK
Ga0307469_122649791	3300031720	Hardwood Forest Soil	LTTRVIAIGAGALVVGVLAGFLWWGTSANRLRDEVRALQNQQADADAALKGLQTKLKKTEEELQSERERRARLELVISEGRK
Ga0318500_105956942	3300031724	Soil	RMIAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0307468_1000652622	3300031740	Hardwood Forest Soil	MERMIAIAAAAAVIGVLAGFLWWGTTANRVRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRARLEQALSEGKK
Ga0307468_1007839362	3300031740	Hardwood Forest Soil	MARMIAIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADDVKGLQAKLKKTEEELQSERDRRARLEQALSEGKK
Ga0318502_103709462	3300031747	Soil	VGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADGELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318535_100829293	3300031764	Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318554_108009572	3300031765	Soil	VIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318509_103066971	3300031768	Soil	VMTRMIAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQA
Ga0318521_106158351	3300031770	Soil	GALTCRGAPTKRGGPILGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADGELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318566_102850502	3300031779	Soil	FLWWGTMANRLRDEVRALQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318576_104267091	3300031796	Soil	TGAGLHPDARHRAERRPAGALTCRGAPTKRGGPILGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318523_103934512	3300031798	Soil	LGTRVIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQGKLKKTEEELQAERERRSRLEQVISEGRK
Ga0307473_101765042	3300031820	Hardwood Forest Soil	MARMIAIAVGAAVIGVLAGFLWWGTTANRMRDELRALQTQHADEVKGLQAKLKKTEEELQSERERRARLEQALSEGKK
Ga0307473_102532591	3300031820	Hardwood Forest Soil	SPGVMARMIAIAAAAAVIGVLAGFLWWGTTANRVRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRVRLEQALSEGKK
Ga0307473_107672662	3300031820	Hardwood Forest Soil	MTRIIAIAVGAAVVGVLAGFLWWGTAANRLRDEIRTVQNQLGDEIKALQTKLKKTEDELQSERERRARLEQALSQGKK
Ga0306923_111993201	3300031910	Soil	VMTRMIAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERE
Ga0310909_109599202	3300031947	Soil	VIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADAELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK
Ga0318563_104146552	3300032009	Soil	DVMTRMIAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0318518_102685401	3300032090	Soil	IAIAVGAAVVGLVAGFLWWGTSANRLRDELRAVQTRQADELGALQSKLKKTEEELQSERERRARLEQALSEGKK
Ga0307471_1002939131	3300032180	Hardwood Forest Soil	MTRIIAIAVGAVVVGVLAGFLWWGTAANRLRDEIRTLQNQQGDEIKTLQGKLKKTEDELQSERERRARLEQALSQGKK
Ga0307471_1003575912	3300032180	Hardwood Forest Soil	MARMIAIAAAAAVIGVLAGFLWWGTTANRVRDELRALQTQHADEVKGLQAKLKKTEEELQSERDRRVRLEQALSEGKK
Ga0307471_1005443173	3300032180	Hardwood Forest Soil	MTRMIAIAVVAGLAVGVLAGFLWWGTAANRTRDELRTLQTQRADEVKGLQDKLKKTEEELQSERERRGRLEQALSQGK
Ga0306920_1029401871	3300032261	Soil	VIAIAVGALLVGVLGGFLWWGTMANRLRDEVRALQNQRADADGELKGVQAKLKKTEEELQAERERRSRLEQVISEGRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052493

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences