Metagenome / Metatranscriptome Family F052509

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052509
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	71 residues
Representative Sequence	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL
Number of Associated Samples	110
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.35 %
% of genes near scaffold ends (potentially truncated)	26.76 %
% of genes from short scaffolds (< 2000 bps)	80.99 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.592 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (21.127 % of family members)
Environment Ontology (ENVO)	Unclassified (39.437 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.718 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.00% β-sheet: 0.00% Coil/Unstructured: 48.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00730	HhH-GPD	19.01
PF13349	DUF4097	7.04
PF09862	DUF2089	4.93
PF04075	F420H2_quin_red	2.11
PF01312	Bac_export_2	0.70
PF01966	HD	0.70
PF01073	3Beta_HSD	0.70
PF05524	PEP-utilisers_N	0.70
PF00370	FGGY_N	0.70
PF13345	Obsolete Pfam Family	0.70
PF04198	Sugar-bind	0.70
PF00892	EamA	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	19.01
COG0177	Endonuclease III	Replication, recombination and repair [L]	19.01
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	19.01
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	19.01
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	19.01
COG2390	DNA-binding transcriptional regulator LsrR, DeoR family	Transcription [K]	0.70

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.59 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.73 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	73.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.56 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	38.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.23 %
Unclassified	root	N/A	1.41 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	38.73 %
Unclassified	root	N/A	1.41 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	38.73 %
Unclassified	root	N/A	1.41 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	38.73 %
Unclassified	root	N/A	1.41 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	38.73 %
Unclassified	root	N/A	1.41 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	38.73 %
Unclassified	root	N/A	1.41 %
Streptomyces sp. CNT360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNT360	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003267\|soilL1_10157258	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1588	Open in IMG/M
3300004081\|Ga0063454_101206975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	626	Open in IMG/M
3300004114\|Ga0062593_101024858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	849	Open in IMG/M
3300004114\|Ga0062593_103065675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300004157\|Ga0062590_101129262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300005172\|Ga0066683_10034471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2933	Open in IMG/M
3300005180\|Ga0066685_10814939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300005330\|Ga0070690_100315611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1125	Open in IMG/M
3300005332\|Ga0066388_103347294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	819	Open in IMG/M
3300005336\|Ga0070680_100000002	All Organisms → cellular organisms → Bacteria	211003	Open in IMG/M
3300005336\|Ga0070680_100323671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1309	Open in IMG/M
3300005338\|Ga0068868_100115183	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300005341\|Ga0070691_10170359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1128	Open in IMG/M
3300005343\|Ga0070687_100127128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1466	Open in IMG/M
3300005345\|Ga0070692_10111335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1514	Open in IMG/M
3300005356\|Ga0070674_100854001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	790	Open in IMG/M
3300005365\|Ga0070688_100596365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	845	Open in IMG/M
3300005366\|Ga0070659_101535163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	594	Open in IMG/M
3300005440\|Ga0070705_100125574	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300005440\|Ga0070705_100451228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	965	Open in IMG/M
3300005440\|Ga0070705_101050819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	664	Open in IMG/M
3300005441\|Ga0070700_100553672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
3300005444\|Ga0070694_100157090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1666	Open in IMG/M
3300005444\|Ga0070694_100479424	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005450\|Ga0066682_10113668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1708	Open in IMG/M
3300005456\|Ga0070678_102253882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300005457\|Ga0070662_100534664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	981	Open in IMG/M
3300005458\|Ga0070681_10540672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1079	Open in IMG/M
3300005458\|Ga0070681_11611294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	575	Open in IMG/M
3300005467\|Ga0070706_100121235	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300005467\|Ga0070706_100449925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1199	Open in IMG/M
3300005468\|Ga0070707_100009619	All Organisms → cellular organisms → Bacteria	8980	Open in IMG/M
3300005468\|Ga0070707_100054173	All Organisms → cellular organisms → Bacteria	3845	Open in IMG/M
3300005468\|Ga0070707_100067505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3440	Open in IMG/M
3300005468\|Ga0070707_100214696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1875	Open in IMG/M
3300005545\|Ga0070695_100356724	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005545\|Ga0070695_100453051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	983	Open in IMG/M
3300005545\|Ga0070695_101406573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300005546\|Ga0070696_100018891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4666	Open in IMG/M
3300005546\|Ga0070696_100567016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	912	Open in IMG/M
3300005547\|Ga0070693_100068226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2087	Open in IMG/M
3300005547\|Ga0070693_100197384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300005549\|Ga0070704_100863964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	812	Open in IMG/M
3300005549\|Ga0070704_102070615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300005598\|Ga0066706_10268189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1334	Open in IMG/M
3300005841\|Ga0068863_102382525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNT360	539	Open in IMG/M
3300005842\|Ga0068858_102039245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300006791\|Ga0066653_10724011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300006852\|Ga0075433_10149618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2076	Open in IMG/M
3300006852\|Ga0075433_10552034	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1013	Open in IMG/M
3300006852\|Ga0075433_11398934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300006871\|Ga0075434_100184260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2108	Open in IMG/M
3300006871\|Ga0075434_100921483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300006903\|Ga0075426_11100763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300006904\|Ga0075424_100125551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2712	Open in IMG/M
3300006914\|Ga0075436_100570948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300009092\|Ga0105250_10163922	All Organisms → cellular organisms → Bacteria → Terrabacteria group	929	Open in IMG/M
3300009098\|Ga0105245_10841198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	957	Open in IMG/M
3300009098\|Ga0105245_11372593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300009137\|Ga0066709_100048086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4779	Open in IMG/M
3300009147\|Ga0114129_11621803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	791	Open in IMG/M
3300009148\|Ga0105243_12037697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300009162\|Ga0075423_10200824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2091	Open in IMG/M
3300009176\|Ga0105242_11257149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	762	Open in IMG/M
3300009176\|Ga0105242_12354417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300009177\|Ga0105248_10652048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1188	Open in IMG/M
3300009545\|Ga0105237_11771003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300009551\|Ga0105238_11477636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300009553\|Ga0105249_10957751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	924	Open in IMG/M
3300009553\|Ga0105249_11690163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300010323\|Ga0134086_10308578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300010333\|Ga0134080_10386170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	645	Open in IMG/M
3300010362\|Ga0126377_10057350	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300010373\|Ga0134128_13039048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300010396\|Ga0134126_10442343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1505	Open in IMG/M
3300010399\|Ga0134127_10224372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1762	Open in IMG/M
3300010399\|Ga0134127_10699263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1054	Open in IMG/M
3300010400\|Ga0134122_10455230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1146	Open in IMG/M
3300010401\|Ga0134121_11427452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300010401\|Ga0134121_12163761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	592	Open in IMG/M
3300010403\|Ga0134123_10176396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1795	Open in IMG/M
3300011119\|Ga0105246_10101102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2099	Open in IMG/M
3300012208\|Ga0137376_10252589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1529	Open in IMG/M
3300012211\|Ga0137377_11002538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	766	Open in IMG/M
3300012532\|Ga0137373_10466925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	969	Open in IMG/M
3300012955\|Ga0164298_10145369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1324	Open in IMG/M
3300012960\|Ga0164301_10027363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2663	Open in IMG/M
3300012984\|Ga0164309_10963217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300013297\|Ga0157378_10097642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2678	Open in IMG/M
3300013297\|Ga0157378_10123217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2392	Open in IMG/M
3300013307\|Ga0157372_11524384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	770	Open in IMG/M
3300013308\|Ga0157375_11538334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300014497\|Ga0182008_10268024	Not Available	885	Open in IMG/M
3300015371\|Ga0132258_10095184	All Organisms → cellular organisms → Bacteria	6998	Open in IMG/M
3300015371\|Ga0132258_10163966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5347	Open in IMG/M
3300015373\|Ga0132257_100378329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1717	Open in IMG/M
3300015374\|Ga0132255_101524057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1012	Open in IMG/M
3300017997\|Ga0184610_1047172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1263	Open in IMG/M
3300018054\|Ga0184621_10318425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300018466\|Ga0190268_10771103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	722	Open in IMG/M
3300019361\|Ga0173482_10394599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300019878\|Ga0193715_1104025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	566	Open in IMG/M
3300020018\|Ga0193721_1051583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1081	Open in IMG/M
3300020070\|Ga0206356_11310873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300021080\|Ga0210382_10358100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300025907\|Ga0207645_10909586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	598	Open in IMG/M
3300025910\|Ga0207684_10065008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3097	Open in IMG/M
3300025910\|Ga0207684_11454311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	559	Open in IMG/M
3300025910\|Ga0207684_11653326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	517	Open in IMG/M
3300025912\|Ga0207707_10219271	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300025917\|Ga0207660_10000002	All Organisms → cellular organisms → Bacteria	883566	Open in IMG/M
3300025917\|Ga0207660_10982757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	689	Open in IMG/M
3300025917\|Ga0207660_11392063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300025918\|Ga0207662_10012392	All Organisms → cellular organisms → Bacteria	4746	Open in IMG/M
3300025919\|Ga0207657_11283815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	554	Open in IMG/M
3300025921\|Ga0207652_10565343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1021	Open in IMG/M
3300025922\|Ga0207646_10032773	All Organisms → cellular organisms → Bacteria	4700	Open in IMG/M
3300025922\|Ga0207646_10137035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2204	Open in IMG/M
3300025922\|Ga0207646_11035107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	724	Open in IMG/M
3300025923\|Ga0207681_10571870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	932	Open in IMG/M
3300025927\|Ga0207687_10511149	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1004	Open in IMG/M
3300025927\|Ga0207687_10597567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300025933\|Ga0207706_10929543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300025934\|Ga0207686_10852032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300025935\|Ga0207709_10275956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1239	Open in IMG/M
3300025949\|Ga0207667_11306590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	702	Open in IMG/M
3300025960\|Ga0207651_11434318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	622	Open in IMG/M
3300026023\|Ga0207677_10185020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1642	Open in IMG/M
3300026075\|Ga0207708_10931662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	753	Open in IMG/M
3300026078\|Ga0207702_11538185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	659	Open in IMG/M
3300026089\|Ga0207648_10407494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1233	Open in IMG/M
3300026329\|Ga0209375_1062944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1791	Open in IMG/M
3300026343\|Ga0209159_1281438	Not Available	507	Open in IMG/M
3300026536\|Ga0209058_1077087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1764	Open in IMG/M
3300028711\|Ga0307293_10142398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	763	Open in IMG/M
3300028784\|Ga0307282_10053651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1805	Open in IMG/M
3300028807\|Ga0307305_10107951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1286	Open in IMG/M
3300031720\|Ga0307469_12177570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	540	Open in IMG/M
3300031740\|Ga0307468_101093455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	710	Open in IMG/M
3300031820\|Ga0307473_11340371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	537	Open in IMG/M
3300031965\|Ga0326597_10350970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1658	Open in IMG/M
3300033412\|Ga0310810_10123770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3046	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.08%
Host-Associated	Host-Associated	35.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.97%
Plants	Host-Associated → Plants	35.92%
Aquatic	Environmental → Aquatic	2.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.45%
Sediment	Environmental → Aquatic → Sediment	1.41%
Freshwater	Environmental → Aquatic → Freshwater	0.70%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	31.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.70%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	30.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.41%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL1_101572582	3300003267	Sugarcane Root And Bulk Soil	MRHADAELQLWLANERIAREQHEMEMAHLARVGSETPTLRQRAGRAVIALGERLAGDARPIGEARRLMTRAF*
Ga0063454_1012069752	3300004081	Soil	MRHADAELALWLANDRIAREQREMEMAHLVRAGSETSTFRQRAGQAMISLGERLAGDPRPVGEARRLVTRPS*
Ga0062593_1010248582	3300004114	Soil	MRHADAELQLWLANERIAREQHELEMAQLARAGSETPTIRQRAGQAVIALGQRLAGDSRPVGEAPRLMTRAL*
Ga0062593_1030656751	3300004114	Soil	DAELALWLANDRIAREQHEMEMAHLVRAGSETPTMRQRAGQAVISLGERLAGDARPVGEARRLVARAS*
Ga0062590_1011292622	3300004157	Soil	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTMRQRAGQAVISLGERLAGDARPVGEARRLVARAS*
Ga0066683_100344711	3300005172	Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRHRAGQAVIALGERLAGDARPAGEARRLP
Ga0066685_108149391	3300005180	Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAVIALGERLAGDARPAGEARRLPARAS*
Ga0070690_1003156111	3300005330	Switchgrass Rhizosphere	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL*
Ga0066388_1033472941	3300005332	Tropical Forest Soil	MRSGEAELQLWIANDRIEQRYHEMEMAHLAREGGEIPTLRQRAGQAVIALGERLAGSGHPAGEAPRLMTRAF*
Ga0070680_10000000225	3300005336	Corn Rhizosphere	MRHADAELQLWLANDRISRDQHEVEMARLARAGGGTPTIRQRAGQAVIALGERLAGDGRPAGEAPRLMTRAL*
Ga0070680_1003236712	3300005336	Corn Rhizosphere	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRRRAGQAVIALGERLAGDNRPAGEAPRLMTRAF*
Ga0068868_1001151831	3300005338	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLLRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPRLLARPS*
Ga0070691_101703591	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRSGSETPTIRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070687_1001271282	3300005343	Switchgrass Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070692_101113353	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRAAGEAPRLMTRAL*
Ga0070674_1008540012	3300005356	Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQREMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDPRPAGEAPRLMTRAL*
Ga0070688_1005963652	3300005365	Switchgrass Rhizosphere	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPRLLARPS*
Ga0070659_1015351632	3300005366	Corn Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSERATIRQRAGQAVIALGERLAGDRRPIGEARRLVARPS*
Ga0070705_1001255743	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSERPSIRQRAGQAVISLGERLAGDGRPVGEARRLVARPS*
Ga0070705_1004512282	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLMLANDRIAREYHETEMARLAREGNETPTFRRRAGQAVIALGERLAGDRRPIGEARRLAARPW*
Ga0070705_1010508192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRRRAGQAVIALGERLAGDNRPAGEAPRLMTRAF*
Ga0070700_1005536721	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGGPVGEARRLMTRAL*
Ga0070694_1001570903	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSERPTIRQRAGQAIISLGERLAGDGRLVGEARRLVARPS*
Ga0070694_1004794243	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLATRLF*
Ga0066682_101136682	3300005450	Soil	MRNADAELQLWIANDRIAREYHELEMAQLAREGSATPTFRQRAGQAVIALGERLAGDVRRPAGEARRLATRPT*
Ga0070678_1022538821	3300005456	Miscanthus Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRFGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070662_1005346642	3300005457	Corn Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070681_105406721	3300005458	Corn Rhizosphere	ALWLANDRIAREQHEMEMAHLVRAGSETPTLRRRAGQAVIALGERLAGDNRPAGEAPRLMTRAF*
Ga0070681_116112941	3300005458	Corn Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL*
Ga0070706_1001212351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLATRLF*
Ga0070706_1004499253	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGEAELQLWIANDRIAREYHEMEMARLARGSETPTLRQRAGQALIALGERIAGDGRPAGEAPRLMTRAL*
Ga0070707_1000096196	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLATRLF*
Ga0070707_1000541731	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TMRHADAELQLMLANDRIAREYHETEMARLAREGSETPTFRRRAGQAVIALGERLAGDRRPIGEARRLVARPS*
Ga0070707_1000675051	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LQLWIANDRIAREYHEMEMARLARGSETPTLRQRAGQAVIALGERLAGDGRPAGEAPRLMTRAL*
Ga0070707_1002146961	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQREMEMAHLVRAGSETPTLRQRAGRAFISLGERLAGDARPVGEARRLAARPS*
Ga0070695_1003567241	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSETPTLRQRAGQAVIAVGERLAGDTRPVGEAPRLMTRAF*
Ga0070695_1004530513	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AELQLWLANDRISRDQHEVEMARLARAGGGTPTIRQRAGQAVIALGERLAGDGRPAGEAPRLMTRAL*
Ga0070695_1014065731	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMDMAHLVRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPRLLARPS*
Ga0070696_1000188915	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANDRISRDQHEVEMARLARAGGGTPTIRQRAGQAFIALGERLAGDGRPAGEAPRLMTRAL*
Ga0070696_1005670163	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEVEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL*
Ga0070693_1000682261	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070693_1001973843	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LALWLANDRIAREQHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0070704_1008639641	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLMLANDRIAREYHETEMARLAREGSETPTFRRRAGQAVIALGERLAGDRHPIGEARRLV
Ga0070704_1020706152	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPRLLARPS*
Ga0066706_102681892	3300005598	Soil	MRHADAELQLWLANDRITREYHEAEMAHLARAGSETPTIRQRAGQAVIALGERLAGDARPAGDARRLVARPS*
Ga0068863_1023825251	3300005841	Switchgrass Rhizosphere	RHADAELALWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0068858_1020392451	3300005842	Switchgrass Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRP
Ga0066653_107240112	3300006791	Soil	DRIAREYHEVEMARLARDGSETSTLRQRAGQAVIALGERLAGDARPAGEARRLPARAS*
Ga0075433_101496183	3300006852	Populus Rhizosphere	MRHADAELQLWLANDRIERQQHEMEMAHLVRAGSERPTIRQRAGQAVIALGERLAGDRRPIGEARRLVARPS*
Ga0075433_105520342	3300006852	Populus Rhizosphere	IATDRLAREQQEAELARLARAGSETPTLRQRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0075433_113989341	3300006852	Populus Rhizosphere	MRHADAELQLMLANDRIARECHEAEMARLAREGSETPTFRRRAGRAVIALGERLAGDRRPLGEA
Ga0075434_1001842604	3300006871	Populus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLARAGSETPTLRRRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0075434_1009214833	3300006871	Populus Rhizosphere	ADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0075426_111007632	3300006903	Populus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLARAGSETPTLRQRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0075424_1001255514	3300006904	Populus Rhizosphere	MRHADAELALWLANDRIAREHHEMEMAHLARAGSETPTLRQRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0075436_1005709483	3300006914	Populus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLARAGSEMPTLRQRAGQAFIALGERLAGDVRPVGEARRLAT*
Ga0105250_101639222	3300009092	Switchgrass Rhizosphere	ALWLANDRIARERHELEMAQLVRFGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0105245_108411981	3300009098	Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRTGGETPTIRQRAGQAVISRGERPAGDGRPVGEAPRLMTRAL*
Ga0105245_113725932	3300009098	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMDMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0066709_1000480865	3300009137	Grasslands Soil	MRHADAELQLWLANDRIAREYHEVAMARLARDGSETPTLRQRAGQAVIALGERLAGDARPAGEARRLAARAS*
Ga0114129_116218032	3300009147	Populus Rhizosphere	MRHADAELQLWLANERIAREQHELEMAQLARAGSETPTIRQRAGQAVIGLGQRLAGDSRPVGEAPRLMTRAL*
Ga0105243_120376971	3300009148	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0075423_102008241	3300009162	Populus Rhizosphere	MRHADAELQLWLANDRIERQQHEMEMAHLVRAGSERPTIRERAGQAVISLGERLAGDRRPIGEARRLV
Ga0105242_112571493	3300009176	Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRTGGETPTIRQRAGQAFISLGERLAGDPRPAGEPPRLMTRAL*
Ga0105242_123544171	3300009176	Miscanthus Rhizosphere	ELALWLANDRIAREQHEVEMAQLVRSGGETPTIRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0105248_106520482	3300009177	Switchgrass Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSDTPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0105237_117710031	3300009545	Corn Rhizosphere	DRIAREQHEMEMAHLLRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0105238_114776361	3300009551	Corn Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL*
Ga0105249_109577513	3300009553	Switchgrass Rhizosphere	MRHADAELALWLANDRIARERHELERAQLVRPGSETPTPRQRAGQAVISRGGRLAGDGGPVGEAPRLMTRAL*
Ga0105249_116901631	3300009553	Switchgrass Rhizosphere	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGTARPVGEAPRLLARPS*
Ga0134086_103085781	3300010323	Grasslands Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAVIALGERLAGDARPIGEARRLAVRAS*
Ga0134080_103861701	3300010333	Grasslands Soil	EHTMRHADAELQLWIANDRIAREYHEAEMARLARDGRETPTLRRRAGQAVITLGERLAGDARPIGEARRLAVRAS*
Ga0126377_100573503	3300010362	Tropical Forest Soil	MRHADAELQLWLANDRITRDHHEMEMAHLAREGSETPTLRQRAGQAVIALGERLAGNGHPAGEAPRLMTRAF*
Ga0134128_130390481	3300010373	Terrestrial Soil	WLANDRIAREQHEMDMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0134126_104423432	3300010396	Terrestrial Soil	MKETTMRHADAELALWLANDRIARERHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0134127_102243723	3300010399	Terrestrial Soil	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0134127_106992633	3300010399	Terrestrial Soil	MRHADAELQLWIANDRIAREQREADLAKLVSHGSGTPSLRQRAGRAVISLGEHLAGEAPRVDAPRLMTRAF*
Ga0134122_104552303	3300010400	Terrestrial Soil	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEGPRLMTRAL*
Ga0134121_114274522	3300010401	Terrestrial Soil	ANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL
Ga0134121_121637611	3300010401	Terrestrial Soil	MRHADAELALWLANDRIAREQHELEMAQLVRSGSETPPLRQRAGQAVISLGERLAGDGRPVG
Ga0134123_101763962	3300010403	Terrestrial Soil	MKETTMRHADAELALWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDARPVGETRRLVARPS*
Ga0105246_101011023	3300011119	Miscanthus Rhizosphere	MRHADAELQLWLANDRIERQQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDRRPIGQARRLVARPS*
Ga0137376_102525891	3300012208	Vadose Zone Soil	MRHADAELQLWLANDRITREYHEVEMARLARDGSETPTLRQRAGQAVIALGERLAGDARPAGEARRLVARAS*
Ga0137377_110025381	3300012211	Vadose Zone Soil	MRHADAELQLWLANDRITREYHEAEMAHLARDGSETPTIRQRAGQAVIALGERLAGDARPAGDARRLVARPS*
Ga0137373_104669252	3300012532	Vadose Zone Soil	MRHADAELQLWLANDRIAREYHELEMAHLARDGSETPTLRQRAGQAVIALAERLAGDRRLAGKARLLVTRPS*
Ga0164298_101453692	3300012955	Soil	MRHADAELALWLANDRIAREHHELEMAHLVRVGSETPTIRQRAGQAMISLGERLAGDARPVGEARRLVARAS*
Ga0164301_100273633	3300012960	Soil	MRHADAELALWLANDRIAREHHEMEMAHLVRVGSEMPTIRQRAGQAMISLGERLAGDARPVGEARRLVARAS*
Ga0164309_109632172	3300012984	Soil	MRHADAELAHWLANALAAREHHELEMAHLVRVGSETPTIRQRAGQAMISLGERLAGDARPVGEARRLVARAS*
Ga0157378_100976425	3300013297	Miscanthus Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTIRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0157378_101232171	3300013297	Miscanthus Rhizosphere	MRHADAELQLGLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLVARPS*
Ga0157372_115243842	3300013307	Corn Rhizosphere	AELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL*
Ga0157375_115383342	3300013308	Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLLRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS*
Ga0182008_102680242	3300014497	Rhizosphere	MRHADAELALWLANDRIARQQHAMEMAHLVRAARETPSIRQRAGQAVISLGERLAGDARPVGEAPRLMTRAF*
Ga0132258_100951846	3300015371	Arabidopsis Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTIRQRAGQAVISLGERLAGDGRAVGEAPRLMTQAM*
Ga0132258_101639663	3300015371	Arabidopsis Rhizosphere	MKGDKTMRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRAVGEAPRLMTRAM*
Ga0132257_1003783293	3300015373	Arabidopsis Rhizosphere	MRHADAELALWLPNDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRAVGEAPRLMTRAM*
Ga0132255_1015240571	3300015374	Arabidopsis Rhizosphere	MKGDKTMRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRAVGEAPRLMT
Ga0184610_10471722	3300017997	Groundwater Sediment	MRHAEAELQLWLANDRIAREYHEAEMPRLARDGGAAPTLRQRAGQAVMALGERLAGDARPVGEARRLAVRGF
Ga0184621_103184252	3300018054	Groundwater Sediment	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAMIALGERLAGDARPAGEARHFAPRPS
Ga0190268_107711031	3300018466	Soil	MRHADAELQLWLANDRISREQHEAELARLVRDGRHGGEMPTLRQRAGTALIAFGERLAGSRAGHVARLTH
Ga0173482_103945991	3300019361	Soil	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRAAGEAPRLMTRAL
Ga0193715_11040252	3300019878	Soil	MRHADAELALWLANDRIAREQHEVEMAHLARAGSETPTFRQRAGQAMISLGVRLAGDARPAGEARRLVARPS
Ga0193721_10515832	3300020018	Soil	MRNADAELQLWIANDRIAREYHEVEMAHLAREGSATPTLRQRAGQAVIALGERLAGDVRPTGEARRLAARPS
Ga0206356_113108731	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	ELQLWLANDRIERQQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDRRPIGEARRLVARPS
Ga0210382_103581002	3300021080	Groundwater Sediment	MRHADAELQLWLANDRIARESHEAEMARLARDGSETPTLRRRAGQAMIALGERLAGDARPAGEARRLAPRPS
Ga0207645_109095862	3300025907	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRP
Ga0207684_100650085	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLATRLF
Ga0207684_114543111	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLMLANDRIAREYHETEMARLAREGNETPTFRRRAGQAVIALGERLAGDRRPIGEARRLAARPW
Ga0207684_116533262	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGEAELQLWIANDRIAREYHEMEMARLARGSETPTLRQRAGQALIALGERIAGDGRPAGEAPRLMTRAL
Ga0207707_102192713	3300025912	Corn Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTLRRRAGQAVIALGERLAGDNRPAGEAPRLMTRAF
Ga0207660_10000002627	3300025917	Corn Rhizosphere	MRHADAELQLWLANDRISRDQHEVEMARLARAGGGTPTIRQRAGQAVIALGERLAGDGRPAGEAPRLMTRAL
Ga0207660_109827573	3300025917	Corn Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPR
Ga0207660_113920632	3300025917	Corn Rhizosphere	ELALWLANDRIAREQHEMEMAHLVRAGSETPTLRRRAGQAVIALGERLAGDNRPAGEAPRLMTRAF
Ga0207662_100123923	3300025918	Switchgrass Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL
Ga0207657_112838151	3300025919	Corn Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGRPVGEAPRL
Ga0207652_105653432	3300025921	Corn Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL
Ga0207646_100327736	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLMLANDRIAREYHETEMARLAREGSETPTFRRRAGQAVIALGERLAGDRRPIGEARRLVARPS
Ga0207646_101370352	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQREMEMAHLVRAGSETPTLRQRAGRAFISLGERLAGDARPVGEARRLAARPS
Ga0207646_110351071	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGEAELQLWIANDRIAREYHEMEMARLARGSETPTLRQRAGQAVIALGERLAGDGRPAGEAPRLMTRAL
Ga0207681_105718701	3300025923	Switchgrass Rhizosphere	MRHADAELQLWLANDRIDRQQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDRRPIGEARRLVARPS
Ga0207687_105111492	3300025927	Miscanthus Rhizosphere	DRIAREQHEMDMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS
Ga0207687_105975671	3300025927	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMDMAHLVRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPR
Ga0207706_109295431	3300025933	Corn Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLGERLAGDHRPAGEAPRLMTRAL
Ga0207686_108520322	3300025934	Miscanthus Rhizosphere	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLVARPS
Ga0207709_102759561	3300025935	Miscanthus Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRTGGETPTIRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL
Ga0207667_113065903	3300025949	Corn Rhizosphere	MRHADAELALWLANDRIAREQHELEMAQLVRSGSETPTIRQRAGQAVISLGERLAGDGRP
Ga0207651_114343181	3300025960	Switchgrass Rhizosphere	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSETPTIRQRAGQAFISLAERLAGDHRPAGEAPRLITRAL
Ga0207677_101850203	3300026023	Miscanthus Rhizosphere	MRHADAELQLWLANDRIAREQHEMEMAHLLRAGSERPTIRQRAGQAVISLGERLAGTARPVGEAPRLLARPS
Ga0207708_109316622	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRHADAELALWLANDRIARERHELEMAQLVRSGSETPTLRQRAGQAVISLGERLAGDGGPVGEARRLMTRAL
Ga0207702_115381851	3300026078	Corn Rhizosphere	MRHADAELALWLANDRIARERHEMEMAQLVRAGSETPTIRQRAGQAVISLGERLAGDARPVGEARRLLA
Ga0207648_104074943	3300026089	Miscanthus Rhizosphere	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSERPTIRQRAGQAVISLGERLAGDGRPVGEARRLLARPS
Ga0209375_10629443	3300026329	Soil	MRNADAELQLWIANDRIAREYHELEMAQLAREGSATPTFRQRAGQAVIALGERLAGDVRRPAGEARRLATRPT
Ga0209159_12814381	3300026343	Soil	VVLQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAVIALGERLAGDARPAGEARRLPARAS
Ga0209058_10770873	3300026536	Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAVIALGERLAGDARPAGEARRLPARAS
Ga0307293_101423981	3300028711	Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGSETPTLRQRAGQAMIALGERLAGDARPAG
Ga0307282_100536511	3300028784	Soil	MRHADAELQLWLANDRIAREYHEVEMAHLAREGSATPTLRQRAGQAVIALGERLAGDVRPTGEARRLAA
Ga0307305_101079513	3300028807	Soil	MRHADAELQLWLANDRIAREYHEVEMARLARDGGETPTLRQRAGQAMIALGVRLAGDARPAGEARRLAPRLS
Ga0307469_121775701	3300031720	Hardwood Forest Soil	MRHADAELALLLANDRIARKRHEMEMANLVRSGSETPTIRQRAGQAVISLGERLAGDGRPVGEAPRLMTRAL
Ga0307468_1010934551	3300031740	Hardwood Forest Soil	MRHADAELQLWLANERIAREQHEMEMAHLVRAGSERPSIRQRAGQAVISLGERLAGDGRPVGEARRLVARPS
Ga0307473_113403712	3300031820	Hardwood Forest Soil	MRHADAELALWLANDRIAREQHEMEMAHLVRAGSERPSIRQRAGQAVISLGERLAGDGRPVGEARRLVARPS
Ga0326597_103509702	3300031965	Soil	MRHADAELQLWLANDRIAREQREAELAQLVRHGSEMPKFRQRAGKALIAAGERLAGDHGSIGETRRLATRPS
Ga0310810_101237702	3300033412	Soil	MRHADAELALWLANDRIAREQYEMEMAHLVRAGSETPTMRQRAGQAVISLGERLAGDARPVGEARRLVARAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052509

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences