NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052524

Metagenome / Metatranscriptome Family F052524

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052524
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 42 residues
Representative Sequence MAVQVTPHPSWVADLDATLEPSRQAILDTPVIIDASENQLVD
Number of Associated Samples 118
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.30 %
% of genes near scaffold ends (potentially truncated) 97.89 %
% of genes from short scaffolds (< 2000 bps) 87.32 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.887 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.465 % of family members)
Environment Ontology (ENVO) Unclassified
(48.592 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.155 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.43%    β-sheet: 0.00%    Coil/Unstructured: 68.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF03551PadR 72.54
PF03450CO_deh_flav_C 4.23
PF00574CLP_protease 3.52
PF11954DUF3471 2.82
PF14518Haem_oxygenas_2 1.41
PF13715CarbopepD_reg_2 0.70
PF02798GST_N 0.70
PF01545Cation_efflux 0.70
PF12034DUF3520 0.70
PF13646HEAT_2 0.70
PF02738MoCoBD_1 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 72.54
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 72.54
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 72.54
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 7.04
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 7.04
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 3.52
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.70
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.70
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.89 %
UnclassifiedrootN/A2.11 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001086|JGI12709J13192_1001840All Organisms → cellular organisms → Bacteria3018Open in IMG/M
3300001593|JGI12635J15846_10337428All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300002557|JGI25381J37097_1076785All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300002560|JGI25383J37093_10023276All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300002561|JGI25384J37096_10263571All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300002562|JGI25382J37095_10146593All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium775Open in IMG/M
3300002908|JGI25382J43887_10219145All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium900Open in IMG/M
3300002912|JGI25386J43895_10068393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium976Open in IMG/M
3300004780|Ga0062378_10048297All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300005172|Ga0066683_10039375All Organisms → cellular organisms → Bacteria2758Open in IMG/M
3300005172|Ga0066683_10792797All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium552Open in IMG/M
3300005180|Ga0066685_11056187All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300005184|Ga0066671_10293542All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300005187|Ga0066675_11326048All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium530Open in IMG/M
3300005330|Ga0070690_101358848All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300005336|Ga0070680_102009058All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005447|Ga0066689_10580715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium708Open in IMG/M
3300005451|Ga0066681_10093421All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300005454|Ga0066687_10197451All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1096Open in IMG/M
3300005467|Ga0070706_100854780All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300005549|Ga0070704_100275389All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005552|Ga0066701_10231913All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300005556|Ga0066707_11035311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium500Open in IMG/M
3300005557|Ga0066704_10116219All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300005557|Ga0066704_10121656All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1731Open in IMG/M
3300005574|Ga0066694_10106194All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300005576|Ga0066708_10183755All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300005889|Ga0075290_1053508All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium560Open in IMG/M
3300006034|Ga0066656_10408267All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300006046|Ga0066652_101256042All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300006755|Ga0079222_11509588All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium630Open in IMG/M
3300006755|Ga0079222_12397003All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300006794|Ga0066658_10045522All Organisms → cellular organisms → Bacteria1862Open in IMG/M
3300006794|Ga0066658_10621509All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium590Open in IMG/M
3300006797|Ga0066659_11614238All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006954|Ga0079219_10777849All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium747Open in IMG/M
3300007255|Ga0099791_10119372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1222Open in IMG/M
3300007255|Ga0099791_10379386All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300007258|Ga0099793_10695011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300009012|Ga0066710_101266947All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1143Open in IMG/M
3300009088|Ga0099830_10181424All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1637Open in IMG/M
3300009088|Ga0099830_10598128All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium904Open in IMG/M
3300009089|Ga0099828_10002513All Organisms → cellular organisms → Bacteria12623Open in IMG/M
3300009089|Ga0099828_11302400All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium643Open in IMG/M
3300009090|Ga0099827_10949300All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300010159|Ga0099796_10373034All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300010301|Ga0134070_10246937All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300010301|Ga0134070_10449207All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300010320|Ga0134109_10176637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium779Open in IMG/M
3300010326|Ga0134065_10084421All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300010329|Ga0134111_10108366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1071Open in IMG/M
3300010364|Ga0134066_10059310All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1008Open in IMG/M
3300010371|Ga0134125_11413244All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300010371|Ga0134125_12085820All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium616Open in IMG/M
3300010399|Ga0134127_10102016All Organisms → cellular organisms → Bacteria2516Open in IMG/M
3300011269|Ga0137392_10051388All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3103Open in IMG/M
3300011271|Ga0137393_11762594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300011443|Ga0137457_1054951All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012198|Ga0137364_10045864All Organisms → cellular organisms → Bacteria2888Open in IMG/M
3300012198|Ga0137364_11464660All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012203|Ga0137399_10556791All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300012205|Ga0137362_10149319All Organisms → cellular organisms → Bacteria1997Open in IMG/M
3300012207|Ga0137381_10086833All Organisms → cellular organisms → Bacteria2635Open in IMG/M
3300012207|Ga0137381_11698981All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300012208|Ga0137376_10157557All Organisms → cellular organisms → Bacteria1955Open in IMG/M
3300012208|Ga0137376_11446718All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium578Open in IMG/M
3300012210|Ga0137378_11837827All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes509Open in IMG/M
3300012211|Ga0137377_11328467All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012355|Ga0137369_10060181All Organisms → cellular organisms → Bacteria3267Open in IMG/M
3300012355|Ga0137369_10074611All Organisms → cellular organisms → Bacteria2860Open in IMG/M
3300012355|Ga0137369_10097178All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2426Open in IMG/M
3300012357|Ga0137384_11430303All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012361|Ga0137360_10818354All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300012385|Ga0134023_1018151All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes535Open in IMG/M
3300012918|Ga0137396_10180230All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300012930|Ga0137407_11224060All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300012944|Ga0137410_11650554All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium563Open in IMG/M
3300012972|Ga0134077_10554385All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium515Open in IMG/M
3300012976|Ga0134076_10299345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium697Open in IMG/M
3300012976|Ga0134076_10635482All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300014157|Ga0134078_10454552All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium586Open in IMG/M
3300015054|Ga0137420_1322345All Organisms → cellular organisms → Bacteria2395Open in IMG/M
3300015256|Ga0180073_1129751All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes544Open in IMG/M
3300015358|Ga0134089_10039491All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300015359|Ga0134085_10070449All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300017654|Ga0134069_1036530All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1520Open in IMG/M
3300017656|Ga0134112_10041162All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1653Open in IMG/M
3300018056|Ga0184623_10447710All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300018078|Ga0184612_10075809All Organisms → cellular organisms → Bacteria1754Open in IMG/M
3300018433|Ga0066667_10628653All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300018433|Ga0066667_10981639All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium728Open in IMG/M
3300018433|Ga0066667_11075795Not Available695Open in IMG/M
3300018468|Ga0066662_10548936All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1067Open in IMG/M
3300019882|Ga0193713_1119849All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300019885|Ga0193747_1143560All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium548Open in IMG/M
3300020170|Ga0179594_10089979All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300021086|Ga0179596_10190914All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300024219|Ga0247665_1051305All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium574Open in IMG/M
3300024330|Ga0137417_1291981All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300025324|Ga0209640_10340417All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300026295|Ga0209234_1290458All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300026296|Ga0209235_1073980All Organisms → cellular organisms → Bacteria1542Open in IMG/M
3300026296|Ga0209235_1155012All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300026297|Ga0209237_1020969All Organisms → cellular organisms → Bacteria3724Open in IMG/M
3300026297|Ga0209237_1122013All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1093Open in IMG/M
3300026297|Ga0209237_1170690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium789Open in IMG/M
3300026301|Ga0209238_1200048All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300026307|Ga0209469_1002773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8267Open in IMG/M
3300026307|Ga0209469_1087184All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium914Open in IMG/M
3300026313|Ga0209761_1036234All Organisms → cellular organisms → Bacteria2905Open in IMG/M
3300026314|Ga0209268_1135090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300026325|Ga0209152_10297979All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium603Open in IMG/M
3300026329|Ga0209375_1266231All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300026333|Ga0209158_1064335All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1460Open in IMG/M
3300026334|Ga0209377_1097329All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300026524|Ga0209690_1307723All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium503Open in IMG/M
3300026536|Ga0209058_1343458Not Available516Open in IMG/M
3300026537|Ga0209157_1201962All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium838Open in IMG/M
3300026537|Ga0209157_1244664All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium716Open in IMG/M
3300026538|Ga0209056_10460491All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium707Open in IMG/M
3300026540|Ga0209376_1105366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1433Open in IMG/M
3300026548|Ga0209161_10008516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria7868Open in IMG/M
3300026552|Ga0209577_10170907All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300027643|Ga0209076_1011232All Organisms → cellular organisms → Bacteria2301Open in IMG/M
3300027748|Ga0209689_1219958All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium814Open in IMG/M
3300027775|Ga0209177_10295018All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium616Open in IMG/M
3300027875|Ga0209283_10696972All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300027886|Ga0209486_11038644All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium553Open in IMG/M
3300027903|Ga0209488_10668276All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300027903|Ga0209488_10858963All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300028536|Ga0137415_10639343Not Available876Open in IMG/M
3300028536|Ga0137415_10658107All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium859Open in IMG/M
3300028711|Ga0307293_10075906All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300028814|Ga0307302_10521889All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium590Open in IMG/M
3300028878|Ga0307278_10008491All Organisms → cellular organisms → Bacteria4849Open in IMG/M
3300028884|Ga0307308_10235983All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium877Open in IMG/M
3300031114|Ga0308187_10351858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes568Open in IMG/M
3300031720|Ga0307469_10339962All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300032180|Ga0307471_100492398All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300032205|Ga0307472_100773891All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes873Open in IMG/M
3300033407|Ga0214472_11561386All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium562Open in IMG/M
3300033417|Ga0214471_11179582All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium583Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil24.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil13.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.52%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.11%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.11%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.41%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.41%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.41%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.70%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024219Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12709J13192_100184043300001086Forest SoilMAVQVTPHPTWVAELDSTLEPNRQAILDTPVIIDASENQLVDGQIQNFL
JGI12635J15846_1033742813300001593Forest SoilMAVQVTPHPTWVAELDSTLEPNRQAILDTPVIIDASENQLVDGQIQNFLVG
JGI25381J37097_107678513300002557Grasslands SoilMAVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDASENQLVDGQI
JGI25383J37093_1002327643300002560Grasslands SoilMAVEITPHPPWVSELDATLEPSRQAILDTPVIVDASENQLVDGQI
JGI25384J37096_1026357123300002561Grasslands SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHASENQLVD
JGI25382J37095_1014659313300002562Grasslands SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHASENQL
JGI25382J43887_1021914513300002908Grasslands SoilMSVQVTPHPAWVAELDATLEPKREQILDTPVIIHASENELIDGKIQNFLV
JGI25386J43895_1006839313300002912Grasslands SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENALIDGKI
Ga0062378_1004829713300004780Wetland SedimentMSVQVTPHPAWVSDLDSTLEPHRQAILDTPVIIDASENQLVDGQIQNFLVG
Ga0066683_1003937543300005172SoilMAVEITPHPEWVAELDTTLEPSRQAILDTPVIIDASENQL
Ga0066683_1079279713300005172SoilMSVQVTPHPSWVADLDAALDPSREAILDTKVIVHASENQLIDGKIQN
Ga0066685_1105618713300005180SoilMSVQVTPHPKWVADLDAVLDPSREAILDTPVIVDASENQLVDGRIQN
Ga0066671_1029354213300005184SoilMSVQVTPHPAWVADLDAALDPSREAILDTRVIVHASENELVDG
Ga0066675_1132604813300005187SoilMSVQVTPHPAWVAQMDVALDPTREAILNTRVIVDASENQLVEGMTQNFV
Ga0070690_10135884823300005330Switchgrass RhizosphereMAVEITPHPAWVADLDATLEPSRQAILDTPVIVDASENQLIDGKIQNFLVSFY
Ga0070680_10200905813300005336Corn RhizosphereMSVQVTPHPGWVAELDATLEPSRQAILDTPVIVDASENQLVDGQIQ
Ga0066689_1058071523300005447SoilMSVQVTPHPAWVAELDATLEPRREAILDTDVIVHASENQLVDGKIQDF
Ga0066681_1009342133300005451SoilMAVEITPHPSWVADLDATLEPSRQAILDTPVIVDASENQLVDGQIQNF
Ga0066687_1019745133300005454SoilMSVQVTPHPAWVADLDAALDPSREAILDTPVIVHASENELVNGKIQNFLVA
Ga0070706_10085478013300005467Corn, Switchgrass And Miscanthus RhizosphereMAVQVTPHPGWVAELDAALEPSRQAILDTPVIVDASENQLVDGQ
Ga0070704_10027538913300005549Corn, Switchgrass And Miscanthus RhizosphereMAVEITPHPPWVAELDATLEPRRQAILDTQVIIDASENQLIEGQIQNFLVAF
Ga0066701_1023191313300005552SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDAS
Ga0066707_1103531113300005556SoilMSVQVTPHPKWVADLDAALDPSREAILNTRVIVDASENQLADGRIQN
Ga0066704_1011621933300005557SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHASENQLVDGKIQDF
Ga0066704_1012165643300005557SoilMSVQVTPHPAWVAELDATLEPHREAILDTPVIVHASENALINGKIQDFLVAFY
Ga0066694_1010619433300005574SoilMSVQVTPHPPWVADLDSTLEPSRQAILDTPVIIDASENQLV
Ga0066708_1018375533300005576SoilMSVQVTPHPAWVADLDATLDPRREAILDTRVIVHASENELID
Ga0075290_105350813300005889Rice Paddy SoilMSVQVTPHPRWVADLDAALDPGREAILNTQVIVDAS
Ga0066656_1040826723300006034SoilMAVQVTPHPSWVADLDTTLEPSRQAILDTPVIIDASENQL
Ga0066652_10125604213300006046SoilMAVQVTPHPTWVAELDSTLEPSRQAILDTPVIIDAS
Ga0079222_1150958813300006755Agricultural SoilMSVQVTPHPKWVADLDAALDPSREAILDTKVIVDAS
Ga0079222_1239700313300006755Agricultural SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASENQLV
Ga0066658_1004552253300006794SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASENQLVDGRIQNFLVNF
Ga0066658_1062150913300006794SoilMSVQVTPHPSWVADLDATLDPSREAILDTKVIVHASENQ
Ga0066659_1161423823300006797SoilMSVQVTPHPPWVADLDSTLEPSRQAILDTPVIIDASENQ
Ga0079219_1077784923300006954Agricultural SoilMSVQVTPHPKWVADLDAALDPSREAILDTKVIVDASE
Ga0099791_1011937233300007255Vadose Zone SoilMSVQVTPHPPWVADLDSTLEPSRQAILDTPVIIDASENQLVDGQIQ
Ga0099791_1037938623300007255Vadose Zone SoilMSVQVTPHPPWVADLDSTLEPSRQAILDTPVIIDASEN
Ga0099793_1069501113300007258Vadose Zone SoilMPVQVTPHPKWVADLDAVLDPGREAILDTPVIVDASENQLVDGQIQDFLVN
Ga0066710_10126694713300009012Grasslands SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENAL
Ga0099830_1018142433300009088Vadose Zone SoilMPVQVTPHPKWVADLDAVLDPGREAILDTPVIVDASEN
Ga0099830_1059812813300009088Vadose Zone SoilMSVQVTPHPAWVAELDATLEPKREQILDTPVIIHASENELID
Ga0099828_10002513113300009089Vadose Zone SoilMAVQVTPHPSWVAELDSTLEPSREAILDTPVIIDASENQLVDGQ
Ga0099828_1130240023300009089Vadose Zone SoilMPVQVTPHPKWVADLDAVLDPGREAILDTPVIVDASENQLVDGQIQDFLVNFY
Ga0099827_1094930013300009090Vadose Zone SoilMAVEITPHPPWVADLDATLEPSRQAILDTPVIIDASENQLVD
Ga0099796_1037303413300010159Vadose Zone SoilMAVQVTPHPAWVAELDAALEPGRQAILDTPVIVDASENQL
Ga0134070_1024693713300010301Grasslands SoilMAVQVTPHPAWVAELDTALEPSRQAILDTPVIVDASENQLVDGQI
Ga0134070_1044920713300010301Grasslands SoilMAVQVTPHPSWVADLDTTLEPSRQAILDTPVIIDASEN
Ga0134109_1017663723300010320Grasslands SoilMSVQVTPHPKWVADLDAVLDPSREAILDTPVIVDASENQLVD
Ga0134065_1008442123300010326Grasslands SoilMAVEITPHPEWVAELDTTLEPSRQAILDTPVIIDASENQLVDGQIQNF
Ga0134111_1010836613300010329Grasslands SoilMSVQVTPHPSWVADLDATLDPSREAILDTKVIVHASENQLLDGR
Ga0134066_1005931013300010364Grasslands SoilMSVQVTPHPPWVADLDATLDPRREAILDTRVIVHASENELIDGKIQNFL
Ga0134125_1141324413300010371Terrestrial SoilMAVQVTPHPGWVAELDAALEPSRQAILDTPVIVDASENQL
Ga0134125_1208582023300010371Terrestrial SoilMSVVVTPHPSWVAELDAALEPHREAILDTPVVVDASENHLIDGK
Ga0134127_1010201643300010399Terrestrial SoilMAVQVTPHPTWVADLDSTLEPNRQAILDTQVIVDASENQLV
Ga0137392_1005138813300011269Vadose Zone SoilMAVQVTPHPHWVADLDAALDPSREAILDTPVIIDA
Ga0137393_1176259413300011271Vadose Zone SoilMAVQVTPHPHWVADLDAALDPSREAILDTPVIIDSSENQLVDGRIQN
Ga0137457_105495133300011443SoilMAVEITPHPAWVADLDATLEPSRQAILDTPVIVDASENQLV
Ga0137364_1004586443300012198Vadose Zone SoilMAVQVTPHPSWVADLDAKLEPSRQSILDTPVIVHASENQLVD
Ga0137364_1146466013300012198Vadose Zone SoilMAVEITPHPSWVADLDATLEPSRQAILDTPVIIDASENQL
Ga0137399_1055679133300012203Vadose Zone SoilMSVQVTPHPPWVADLDTTLEPSRQAILDTPVIIDASEN
Ga0137362_1014931913300012205Vadose Zone SoilMPVQVTPHPKWVADLDAVLDPGREAILDTPVIVDA
Ga0137381_1008683343300012207Vadose Zone SoilMAVEITPHPPWVADLDATLEPSRQAILDTPVIIDASENQLVDGQIQ
Ga0137381_1169898123300012207Vadose Zone SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHAS
Ga0137376_1015755743300012208Vadose Zone SoilMAVEITPHPAWVADLDATLEPRRQAILDTPVIIDA
Ga0137376_1144671823300012208Vadose Zone SoilMSVQVTPHPKWVADLDAALDPSREAILDTRVIVDASENQLADG
Ga0137378_1183782713300012210Vadose Zone SoilMPVQVTPHPKWVADLDAALDPSREAILDTKVIVDASENQLA
Ga0137377_1132846713300012211Vadose Zone SoilMAVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDASENQLVDG
Ga0137369_1006018153300012355Vadose Zone SoilMAVQVTPHPAWVADLDAALEPGRQAILDTPVIVDAS*
Ga0137369_1007461113300012355Vadose Zone SoilMAVQVTPHPSWVADLDTTLEPSRQAILDTPVIIDASENQLVDGR
Ga0137369_1009717813300012355Vadose Zone SoilMAVQVTPHPSWVADLDATLEPSRQAILDTPVIIDASENQLVD
Ga0137384_1143030313300012357Vadose Zone SoilMAVEITPHPAWVADLDATLEPNRQAILDTPVIIDAS
Ga0137360_1081835413300012361Vadose Zone SoilMAVQVTPHPPWVADLDATLEPSRQAILDTAVIIDASENQLVDG
Ga0134023_101815133300012385Grasslands SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASENQLVTAASRISS*
Ga0137396_1018023033300012918Vadose Zone SoilMSVQVTPHPPWVADLDTTLEPSRQAILDTPVIIDASE
Ga0137407_1122406013300012930Vadose Zone SoilMAVQVTPHPNWVADLDTTLEPSRQAILDTPVIIDASENQLVD
Ga0137410_1165055423300012944Vadose Zone SoilMAVQVTPHPAWVADLDAALEPGRQAILDTPVIVDASE
Ga0134077_1055438513300012972Grasslands SoilMSVQVTPHPKWVADLDAALDPSREAILDTRVIVDASENQLADGRIQNFLVAF
Ga0134076_1029934523300012976Grasslands SoilMTVQVTPHPPWVADLDAALEPHREAILDTKVVVEASENHLADGKVQNFLVAF
Ga0134076_1063548223300012976Grasslands SoilMSVEITPNPNWVAELDATLEPNRQAILDTAVIVDASEN
Ga0134078_1045455213300014157Grasslands SoilMSVQVTPHPPWVADLDAALDPSREAILDTRVIVHASENELVD
Ga0137420_132234563300015054Vadose Zone SoilMSVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDASENQLVDGQIQ
Ga0180073_112975123300015256SoilMAVEITPHPSWVADLDARLEPSRQAILDTPVIVDASENQLVDGQIQNFLVGFY
Ga0134089_1003949133300015358Grasslands SoilMTVQVTPHPPWVADLDAALEPHREAILDTKVVVEASENHL
Ga0134085_1007044933300015359Grasslands SoilMSVQVTPHPKWVADLDAALDPGREAILDTRVIVDASENQLADGR
Ga0134069_103653033300017654Grasslands SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASE
Ga0134112_1004116233300017656Grasslands SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHASENQLVDG
Ga0184623_1044771023300018056Groundwater SedimentMAVQVTPHPGWVAELDAALEPRRQAILDTPVIVDASENQLV
Ga0184612_1007580913300018078Groundwater SedimentMAVQVTPHPAWVAELDAALEPSRQAILDTPVIVDASENQL
Ga0066667_1062865323300018433Grasslands SoilMAVEITPHPEWVAELDTTLEPSRQAILDTPVIIDASENQLV
Ga0066667_1098163913300018433Grasslands SoilMSVQVTPHPSWVADLDAALDPSREAILDTKVIVHASENQLIDGKIQNF
Ga0066667_1107579523300018433Grasslands SoilVQVTPHPSWVASLNATLDPIQRAILDTPVIEDAAE
Ga0066662_1054893633300018468Grasslands SoilMSVQVTPHPAWVAELDATLEPHREAILDTPVIVHASE
Ga0193713_111984913300019882SoilMAVQVTPHPAWVAELDTALEPSRQAILDTPVIVDASENQLVDGQIQNVLVGF
Ga0193747_114356023300019885SoilMSVKVTPHPAWVADLDTELEPHRKAILDTPVVVDASENR
Ga0179594_1008997913300020170Vadose Zone SoilMAVQVTPHPDWVAVLDSKLEPSRQAILDTPVIVHASENQLVD
Ga0179596_1019091433300021086Vadose Zone SoilMAVEITPHPAWVADLDATLEPNRQAILDTPVIIDASENQL
Ga0247665_105130513300024219SoilMTVQVTPHPKWVADLDAALDPSREAILDTRVIVDASENQLAD
Ga0137417_129198123300024330Vadose Zone SoilMAVQVTPHPSWVADFDTSLEPSRQAILDTPVIIDASEN
Ga0209640_1034041713300025324SoilMAVQVTPHPSWVADLDAALEPSRLAILDTPVIVDASENQLVDGQI
Ga0209234_129045823300026295Grasslands SoilMAVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDANCL
Ga0209235_107398033300026296Grasslands SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENALI
Ga0209235_115501213300026296Grasslands SoilMAVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDASEN
Ga0209237_102096913300026297Grasslands SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASENQ
Ga0209237_112201313300026297Grasslands SoilMSVQVTPHPAWVAELDATLEPHREAILDTPVIVHASEN
Ga0209237_117069013300026297Grasslands SoilMSVQVTPHPEWVVDLDRALEPHRLAVLTTPVVEHSAE
Ga0209238_120004823300026301Grasslands SoilMAVEITAHPAWVAELDGTLEPSRQAILDTPVIVDASENQLVDG
Ga0209469_100277313300026307SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENALIDGKIQD
Ga0209469_108718413300026307SoilMSVQVTPHPKWVADLDAVLDPSREAILDTRVIVDASENQL
Ga0209761_103623413300026313Grasslands SoilMSVQVTPHPRWVADLDAALDPSREAILDTSVIVHASEN
Ga0209268_113509013300026314SoilMSVQVTPHPSWVADLDAALDPSREAILDTKVIVHASENQLIDGKIQNFLV
Ga0209152_1029797923300026325SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENVLI
Ga0209375_126623123300026329SoilMSVLVTPHPRWVADLDAALDPSREAILDTSVIVHA
Ga0209158_106433543300026333SoilVDVTPHPAWVADLDAALEPTQEAILQTPVIEDAAEN
Ga0209377_109732933300026334SoilMSVQVTPHPKWVADLDAALDPSREAILNTRVIVDASENQL
Ga0209690_130772313300026524SoilMSVQVTPHPAWVADLDATLDPRREAILDTPVIVHASENELVD
Ga0209058_134345823300026536SoilVQVTPHPSWVASLNATLDPIQRAILDTPVIEDAAEN
Ga0209157_120196213300026537SoilMSVQVTPHPKWVADLDAALDPSREAILDTRVIVDA
Ga0209157_124466423300026537SoilMSVQVTPHPKWVADLDAALDPSREAILNTRVIVDASENQLADGRIQNFLVAF
Ga0209056_1046049113300026538SoilMSVQVTPHPSWVAELDAALEPHREAILETPVVVEASENHLADGKVQNFLVAFY
Ga0209376_110536613300026540SoilMSVQVTPHPKWVADLDAVLDPSREAILDTPVIVDASENQLVDGRIQDFLV
Ga0209161_1000851613300026548SoilMSVQVTPHPAWVADLDATLDPRREAILDTPVIVHASENELVDGQIQNFLV
Ga0209577_1017090713300026552SoilMSVQVTPHPPWVADLDATLEPSRQAILDTPVIIDASENQLVDGQI
Ga0209076_101123213300027643Vadose Zone SoilMSVQVTPHPPWVADLDTTLEPSRQAILDTPVIIDASENQLVDGQI
Ga0209689_121995823300027748SoilMSVQVTPHPAWVADLDATLDPSREAILDTNVIVHA
Ga0209177_1029501813300027775Agricultural SoilMTVQVTPHPAWVADLDAALDPSREAILDTRVIVDASEN
Ga0209283_1069697213300027875Vadose Zone SoilMAVQVTPHPSWVAELDSTLEPSRQAILDTPVIIDAS
Ga0209486_1103864423300027886Agricultural SoilMSVLVTPHPRWVADLDAALDPGREAILDTPVIVHASENRLVDGKIQDF
Ga0209488_1066827613300027903Vadose Zone SoilMAVEITPHPGWVADLDATLEPSRQAILDTPVIVDASENQLV
Ga0209488_1085896323300027903Vadose Zone SoilMSVQVTPHPPWVADLDSTLEPSRQAILDTPVIIDASENQLVDG
Ga0137415_1063934323300028536Vadose Zone SoilMSVQVTPHPAWVAELDATLEPQREAILDTPVIIHASENALIDGKIQAQIFTVHR
Ga0137415_1065810723300028536Vadose Zone SoilMSVQVTPHPRWVADLDAALDPSREAILDTSVIVHASENQLVDGRI
Ga0307293_1007590633300028711SoilMAVQVTPHPGWVAELDAALEPGRQAILDTPVIVDAS
Ga0307302_1052188923300028814SoilMAVQVTPHPAWVAELDAALEPGRQAILDTPVIADASENQLIDGQI
Ga0307278_1000849163300028878SoilMSVQVTPNPSWVADLDSTLEPRRQAILDTPVIIDASE
Ga0307308_1023598323300028884SoilMSVQVTPHPKWVADLDAALDPSREAILDTPVIVDA
Ga0308187_1035185823300031114SoilEESQMAVQVTPHPSWVADLDAALEPGRQAILDTPVIVDAS
Ga0307469_1033996233300031720Hardwood Forest SoilMTVQVTPHPAWVADLDAALDPSREANHDTRVIVDAS
Ga0307471_10049239813300032180Hardwood Forest SoilMSVQVTPHPKWVADLDAVLDPSREAILDTPVIVDA
Ga0307472_10077389113300032205Hardwood Forest SoilMPVQVTPHPKWVADLDAVLDPSREAILDTPVIVDASENQLVDGQIQDFLVNF
Ga0214472_1156138613300033407SoilMAVQVTPHPAWVADLDAALEPGRQAILDTPVIVDASENQLVN
Ga0214471_1117958213300033417SoilMAVQVTPHPAWVADLDAALEPGRQAILDTPVIVDASENQLVNG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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