Metagenome / Metatranscriptome Family F052782

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052782
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	67 residues
Representative Sequence	MDFRLRMILWIPTLAYAGFLLLGGKNLASLGQVVTAAFLGALLGFLLATMFTIRQHRREIRLAR
Number of Associated Samples	97
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.35 %
% of genes near scaffold ends (potentially truncated)	26.76 %
% of genes from short scaffolds (< 2000 bps)	68.31 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.535 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.127 % of family members)
Environment Ontology (ENVO)	Unclassified (42.958 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.87% β-sheet: 0.00% Coil/Unstructured: 39.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF07238	PilZ	6.34
PF00072	Response_reg	2.11
PF00069	Pkinase	2.11
PF03551	PadR	1.41
PF13426	PAS_9	1.41
PF13545	HTH_Crp_2	1.41
PF11175	DUF2961	1.41
PF02371	Transposase_20	1.41
PF00082	Peptidase_S8	1.41
PF07040	DUF1326	1.41
PF08238	Sel1	0.70
PF11008	DUF2846	0.70
PF01145	Band_7	0.70
PF13548	DUF4126	0.70
PF00583	Acetyltransf_1	0.70
PF00078	RVT_1	0.70
PF05235	CHAD	0.70
PF04075	F420H2_quin_red	0.70
PF07228	SpoIIE	0.70
PF00903	Glyoxalase	0.70
PF00486	Trans_reg_C	0.70
PF11154	DUF2934	0.70
PF08327	AHSA1	0.70
PF13581	HATPase_c_2	0.70
PF02142	MGS	0.70
PF13414	TPR_11	0.70
PF03796	DnaB_C	0.70
PF00076	RRM_1	0.70
PF13751	DDE_Tnp_1_6	0.70
PF14534	DUF4440	0.70
PF13424	TPR_12	0.70
PF02153	PDH_N	0.70
PF12704	MacB_PCD	0.70
PF07730	HisKA_3	0.70
PF14026	DUF4242	0.70
PF01070	FMN_dh	0.70
PF10056	DUF2293	0.70
PF04397	LytTR	0.70
PF03144	GTP_EFTU_D2	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	8.45
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.41
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.41
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.41
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.41
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.41
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.70
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.70
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.70
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.70
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.70
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.70
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.70
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.70
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.70
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.70
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.54 %
Unclassified	root	N/A	27.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.54 %
Unclassified	root	N/A	27.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.54 %
Unclassified	root	N/A	27.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.89 %
Unclassified	root	N/A	27.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.08 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.41 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.41 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.41 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.70 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.70 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.41 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.41 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.70 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.70 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.70 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.41 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.41 %
Cytophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga	0.70 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.70 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.70 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.24 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.41 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.41 %
Cytophaga aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga → Cytophaga aurantiaca	0.70 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.70 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.70 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16986390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1002253	All Organisms → cellular organisms → Bacteria	3868	Open in IMG/M
3300001867\|JGI12627J18819_10006654	All Organisms → cellular organisms → Bacteria	4451	Open in IMG/M
3300004101\|Ga0058896_1000929	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300004101\|Ga0058896_1002146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	598	Open in IMG/M
3300004102\|Ga0058888_1415049	Not Available	517	Open in IMG/M
3300004119\|Ga0058887_1485831	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300004139\|Ga0058897_10052165	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300004631\|Ga0058899_12227369	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005167\|Ga0066672_10952650	Not Available	528	Open in IMG/M
3300005332\|Ga0066388_100727147	Not Available	1596	Open in IMG/M
3300005332\|Ga0066388_100752739	Not Available	1574	Open in IMG/M
3300005434\|Ga0070709_10680634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Cytophaga → Cytophaga aurantiaca	799	Open in IMG/M
3300005434\|Ga0070709_11022856	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005435\|Ga0070714_100143514	All Organisms → cellular organisms → Bacteria → Acidobacteria	2145	Open in IMG/M
3300005436\|Ga0070713_100946518	Not Available	829	Open in IMG/M
3300005451\|Ga0066681_10170905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300005542\|Ga0070732_10054465	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300005542\|Ga0070732_10511569	Not Available	727	Open in IMG/M
3300005542\|Ga0070732_10863045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005554\|Ga0066661_10406889	Not Available	833	Open in IMG/M
3300006028\|Ga0070717_10120226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2249	Open in IMG/M
3300006028\|Ga0070717_11381410	Not Available	640	Open in IMG/M
3300006028\|Ga0070717_11599015	Not Available	591	Open in IMG/M
3300006041\|Ga0075023_100374851	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300006050\|Ga0075028_100222827	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300006050\|Ga0075028_100288774	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006050\|Ga0075028_100339994	Not Available	845	Open in IMG/M
3300006052\|Ga0075029_100129112	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300006059\|Ga0075017_100027829	All Organisms → cellular organisms → Bacteria	3711	Open in IMG/M
3300006059\|Ga0075017_100291210	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300006059\|Ga0075017_100383212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1052	Open in IMG/M
3300006059\|Ga0075017_100983850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300006162\|Ga0075030_100019753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5805	Open in IMG/M
3300006162\|Ga0075030_100298524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1288	Open in IMG/M
3300006174\|Ga0075014_100005975	All Organisms → cellular organisms → Bacteria	3933	Open in IMG/M
3300006174\|Ga0075014_100658302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	605	Open in IMG/M
3300006354\|Ga0075021_10128147	Not Available	1523	Open in IMG/M
3300006903\|Ga0075426_10872228	Not Available	678	Open in IMG/M
3300010043\|Ga0126380_12197442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300010048\|Ga0126373_10111154	All Organisms → cellular organisms → Bacteria → Acidobacteria	2550	Open in IMG/M
3300010048\|Ga0126373_10266265	All Organisms → cellular organisms → Bacteria → Acidobacteria	1694	Open in IMG/M
3300010048\|Ga0126373_10352119	Not Available	1485	Open in IMG/M
3300010358\|Ga0126370_10834199	Not Available	825	Open in IMG/M
3300010358\|Ga0126370_11370446	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300010359\|Ga0126376_10194477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1674	Open in IMG/M
3300010376\|Ga0126381_100003787	All Organisms → cellular organisms → Bacteria → Acidobacteria	16401	Open in IMG/M
3300010376\|Ga0126381_100006878	All Organisms → cellular organisms → Bacteria	12625	Open in IMG/M
3300010376\|Ga0126381_100908233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1268	Open in IMG/M
3300010376\|Ga0126381_104311207	Not Available	551	Open in IMG/M
3300011120\|Ga0150983_11105346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300011120\|Ga0150983_12204398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300012200\|Ga0137382_10130658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1687	Open in IMG/M
3300012202\|Ga0137363_10000241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30290	Open in IMG/M
3300012349\|Ga0137387_10173043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300012361\|Ga0137360_10146775	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300012582\|Ga0137358_10006659	All Organisms → cellular organisms → Bacteria	7027	Open in IMG/M
3300012922\|Ga0137394_10129211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2143	Open in IMG/M
3300012922\|Ga0137394_10850883	Not Available	763	Open in IMG/M
3300012925\|Ga0137419_10080831	All Organisms → cellular organisms → Bacteria → Acidobacteria	2197	Open in IMG/M
3300012948\|Ga0126375_10571544	Not Available	857	Open in IMG/M
3300012960\|Ga0164301_11044571	Not Available	645	Open in IMG/M
3300012961\|Ga0164302_11813562	Not Available	515	Open in IMG/M
3300012971\|Ga0126369_10005115	All Organisms → cellular organisms → Bacteria	9656	Open in IMG/M
3300012971\|Ga0126369_10792508	Not Available	1029	Open in IMG/M
3300012986\|Ga0164304_11385890	Not Available	577	Open in IMG/M
3300015245\|Ga0137409_10370406	Not Available	1245	Open in IMG/M
3300015373\|Ga0132257_103848670	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300016371\|Ga0182034_11464784	Not Available	598	Open in IMG/M
3300017930\|Ga0187825_10251073	Not Available	648	Open in IMG/M
3300020199\|Ga0179592_10038525	All Organisms → cellular organisms → Bacteria → Acidobacteria	2165	Open in IMG/M
3300020579\|Ga0210407_10018824	All Organisms → cellular organisms → Bacteria	5128	Open in IMG/M
3300020579\|Ga0210407_10559633	Not Available	892	Open in IMG/M
3300020581\|Ga0210399_10017710	All Organisms → cellular organisms → Bacteria	5630	Open in IMG/M
3300020583\|Ga0210401_10096971	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300020583\|Ga0210401_10167951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300020583\|Ga0210401_10829383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300021088\|Ga0210404_10029813	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300021088\|Ga0210404_10204251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1060	Open in IMG/M
3300021168\|Ga0210406_10302713	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300021170\|Ga0210400_11639288	Not Available	507	Open in IMG/M
3300021178\|Ga0210408_10006000	All Organisms → cellular organisms → Bacteria → Acidobacteria	10564	Open in IMG/M
3300021180\|Ga0210396_10021088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6033	Open in IMG/M
3300021180\|Ga0210396_11611964	Not Available	530	Open in IMG/M
3300021404\|Ga0210389_10493312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	964	Open in IMG/M
3300021432\|Ga0210384_10467500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1136	Open in IMG/M
3300021475\|Ga0210392_10590468	Not Available	823	Open in IMG/M
3300021476\|Ga0187846_10058749	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300021559\|Ga0210409_10161621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2049	Open in IMG/M
3300021560\|Ga0126371_10105312	All Organisms → cellular organisms → Bacteria → Acidobacteria	2818	Open in IMG/M
3300021560\|Ga0126371_10336375	Not Available	1642	Open in IMG/M
3300021560\|Ga0126371_10967587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	994	Open in IMG/M
3300022531\|Ga0242660_1013475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1441	Open in IMG/M
3300022531\|Ga0242660_1027658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1120	Open in IMG/M
3300022531\|Ga0242660_1100972	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300022532\|Ga0242655_10110670	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300022532\|Ga0242655_10333251	Not Available	502	Open in IMG/M
3300022717\|Ga0242661_1011401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300022722\|Ga0242657_1092138	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300022724\|Ga0242665_10300586	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300024331\|Ga0247668_1092815	Not Available	611	Open in IMG/M
3300025906\|Ga0207699_10882565	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300025915\|Ga0207693_10813936	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026557\|Ga0179587_10578581	Not Available	739	Open in IMG/M
3300026920\|Ga0208575_1013084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300027034\|Ga0209730_1008908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300027050\|Ga0209325_1011396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300027071\|Ga0209214_1000464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2865	Open in IMG/M
3300027548\|Ga0209523_1021905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300027894\|Ga0209068_10023214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3037	Open in IMG/M
3300027910\|Ga0209583_10203791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300027911\|Ga0209698_10011514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8849	Open in IMG/M
3300027915\|Ga0209069_10221481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300029636\|Ga0222749_10627177	Not Available	588	Open in IMG/M
3300030730\|Ga0307482_1159267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031231\|Ga0170824_103952402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4686	Open in IMG/M
3300031231\|Ga0170824_111159921	Not Available	512	Open in IMG/M
3300031545\|Ga0318541_10056927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2021	Open in IMG/M
3300031715\|Ga0307476_10000011	All Organisms → cellular organisms → Bacteria → Acidobacteria	308008	Open in IMG/M
3300031715\|Ga0307476_10010140	All Organisms → cellular organisms → Bacteria	5860	Open in IMG/M
3300031718\|Ga0307474_10000028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	114814	Open in IMG/M
3300031753\|Ga0307477_10237398	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300031753\|Ga0307477_10340073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300031754\|Ga0307475_10059321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2898	Open in IMG/M
3300031754\|Ga0307475_10106091	Not Available	2198	Open in IMG/M
3300031754\|Ga0307475_10149707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1852	Open in IMG/M
3300031792\|Ga0318529_10072320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1523	Open in IMG/M
3300031820\|Ga0307473_10021991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2620	Open in IMG/M
3300031820\|Ga0307473_10472443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031823\|Ga0307478_10024480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4294	Open in IMG/M
3300031946\|Ga0310910_10096356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2188	Open in IMG/M
3300031962\|Ga0307479_10002473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16788	Open in IMG/M
3300031962\|Ga0307479_10143079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2343	Open in IMG/M
3300031962\|Ga0307479_10165523	All Organisms → cellular organisms → Bacteria → Acidobacteria	2171	Open in IMG/M
3300032174\|Ga0307470_10136785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1475	Open in IMG/M
3300032180\|Ga0307471_100020948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4787	Open in IMG/M
3300032180\|Ga0307471_100056528	All Organisms → cellular organisms → Bacteria → Acidobacteria	3279	Open in IMG/M
3300032180\|Ga0307471_101443939	Not Available	847	Open in IMG/M
3300032180\|Ga0307471_104291541	Not Available	503	Open in IMG/M
3300032205\|Ga0307472_100372042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300032205\|Ga0307472_101919691	Not Available	591	Open in IMG/M
3300032828\|Ga0335080_10176519	Not Available	2357	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.59%
Host-Associated	Host-Associated	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.21%
Aquatic	Environmental → Aquatic	13.38%
Plants	Host-Associated → Plants	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.51%
Sediment	Environmental → Aquatic → Sediment	12.68%
Freshwater	Environmental → Aquatic → Freshwater	0.70%
Cave	Environmental → Terrestrial → Cave	0.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.20%
Loam	Environmental → Terrestrial → Soil → Loam	17.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	15.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	12.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.11%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01555620	2088090014	Soil	MGFRLRMIIWIPALAYAGFLLLGGKTLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARLRNC
AP72_2010_repI_A01DRAFT_10022534	3300000579	Forest Soil	MGFRWRMIIWIPMVAYAGFLLLGGKNLVSLGQVAFAVFLGALLGFLLAAMFTMRQIRREKRFAHLRN*
JGI12627J18819_100066544	3300001867	Forest Soil	MDFRVRMILWIPTLAYAAFLLLGGKNFSSLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRQEIRFAR*
Ga0058896_10009292	3300004101	Forest Soil	RMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQLRREKRIARLRSC*
Ga0058896_10021461	3300004101	Forest Soil	RMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC*
Ga0058888_14150491	3300004102	Forest Soil	NDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC*
Ga0058887_14858311	3300004119	Forest Soil	WIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC*
Ga0058897_100521652	3300004139	Forest Soil	LMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQLRREKRIARLRSC*
Ga0058899_122273691	3300004631	Forest Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC*
Ga0066672_109526502	3300005167	Soil	MDFRLRMILWIPTLAYAAFLLLDGKNFASLGQVVTAAFLGALLGFLLATMFTIRQLRRQKRIRPLGSFEPFD*
Ga0066388_1007271471	3300005332	Tropical Forest Soil	MGFRLRMILWIPTVAYAGFLLLGGKNLMSLGQVVFALFLGALLGFLLAAMFTMRQIRRQKRLARLHHC*
Ga0066388_1007527392	3300005332	Tropical Forest Soil	MAKGGLHMGFRSRMLLWIPTLSYEGCLLSGGKNIASLAQVATAGFLGATMGFLVAAMFTIRQSRRDRRRLSR*
Ga0070709_106806341	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDFRLRLILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIVFTIRQHRRQRRREIRFAR*
Ga0070709_110228561	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKLAPWEREEFMGFRLRMIVWIPTLAYAGFLLLGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQLR
Ga0070714_1001435142	3300005435	Agricultural Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQIRREKRIARLRSC*
Ga0070713_1009465182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKLAPWEREEFMGFRLRMIVWIPTLAYAGFLLLGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARITVENRR*
Ga0066681_101709052	3300005451	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC*
Ga0070732_100544653	3300005542	Surface Soil	MGFRLRVILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC*
Ga0070732_105115692	3300005542	Surface Soil	MDFRLRLILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRREIRFAR*
Ga0070732_108630451	3300005542	Surface Soil	MDFRLRMILWIPTFAYVGFLLLGGKNLASLGQVVFVVFLGALLGFLLATMFTIRQLRREKRFARLRNC*
Ga0066661_104068891	3300005554	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLR
Ga0070717_101202264	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLRMILWIPTLAYAGLLLLGGKNSASLGQVVFAMFLGALLGFLLAAMFTIRQLRRERRVRLSA*
Ga0070717_113814101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLRMIIWIPTLAYAGFLLLGGKTLASLGQVVYALFLGALLGFLLAAMFTMRQLRREKRFARLRNC*
Ga0070717_115990151	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQIRREKRIARLRSC*
Ga0075023_1003748511	3300006041	Watersheds	GLMDFRLRMILWIPTLAYAGFLLLGGKNLTSPGQIVTAAFLGAVLGFLLASMFTIRQHRRQIRFARLGRS*
Ga0075028_1002228272	3300006050	Watersheds	MDFRLRMILWIPTLAYAGFLLLGGKNLTSPGQVVTAAFLGAVLGFLLASMFTIRQHRREIRFARLGRS*
Ga0075028_1002887742	3300006050	Watersheds	MGFRFRMIVWIPTLAYAGFLLLGGKNLASLGQVVWAVFLGALLGFLLAAMFTMRQLRREKRFARLHHC*
Ga0075028_1003399942	3300006050	Watersheds	MGFRLRMILWIPTLAYVGFLLLGGKNLASLGQVVTAAFLGALLGFLLAIMFTVRQHRREIRFAH*
Ga0075029_1001291122	3300006052	Watersheds	MGFRLRMILWIPAFAYVGFLLLGGKNLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR*
Ga0075017_1000278293	3300006059	Watersheds	MGFRLRMILWIPTVAYAGFLLLGGKTLTSLGQVVTAAFLGALLGFLLAIMFTLGQHRRETRFAR*
Ga0075017_1002912102	3300006059	Watersheds	MGFRLRMILWIPTLAYVGFLLLGGKNLASLGQVVTAAFLGALLGFLLAIMFTIRQHRREIRFAR*
Ga0075017_1003832122	3300006059	Watersheds	MAFRWRLILWIPTLAYAGFLLLGGKSLTSLGQVFTAAFLGALLGFLLAIMFTLRQHRRATRFAR*
Ga0075017_1009838501	3300006059	Watersheds	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGEVVFAVFQGALLGFLLATMFTIRQLRREK
Ga0075030_1000197533	3300006162	Watersheds	MGFRLRMILWIPTVAYAGFLLLGGKTLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR*
Ga0075030_1002985242	3300006162	Watersheds	MAFRWRLILWIPTLAYAGFLLLGGKSLTSLGQVFTAAFLGALLGFLLAIMFTLRQHRRQTRFAR*
Ga0075014_1000059753	3300006174	Watersheds	MHFRLRVILWIPTLAYASFLLLGGKNLTTLGQVVTAAFLGAQLGFLLSVMFTLREHRRETRLAR*
Ga0075014_1006583022	3300006174	Watersheds	EVLMAFRWRLILWIPTLAYAGFLLLGGRSLTSLGAVFTAAFLGALLGFLLAIMFTLRQHRRATRFAR*
Ga0075021_101281472	3300006354	Watersheds	MDFRLRMILWIPTLAYAGFLLLGGKNLTSPGQIVTAAFLGALLGFLLASMFTIRQHRRQIRFARLGRS*
Ga0075426_108722282	3300006903	Populus Rhizosphere	MGFRLRMILWIPMLAYAGFLLLGGKNLASLGQVVFAMFLGALLGFLLAAMFTIRQLRRERRVRLSG*
Ga0126380_121974422	3300010043	Tropical Forest Soil	MGFRFRMILWIPTAAYAGFLLLGVTNLASLSQVVLAVFLGALLGFLLAAMFTMRQIRR
Ga0126373_101111545	3300010048	Tropical Forest Soil	MSFRLRMIFWVPTLAYAGFLLLGGKNLASVGQVVFAVFQGALLGFLLAVMFTMRQLRREKRFARLRNC*
Ga0126373_102662653	3300010048	Tropical Forest Soil	MNLLWRMILWIPAFAYTGFLLAGGRNLASLGQVFTIVVLGALLGFLLAAMFTMRQCRRERTLQSAR*
Ga0126373_103521192	3300010048	Tropical Forest Soil	MAKGGLHMGFGSRMLLWIPTLSYEGCLLSGGKNASLAQVATAGFLGATMGFLVAAMFTIRQSRRDRRRLSR*
Ga0126370_108341991	3300010358	Tropical Forest Soil	MAKGGLHMGFRSRMLLWIPTLSYEGCLLSGGKNIASLAQVATAGFLGATMGFLVAAMFTIRQSRRDRRRL
Ga0126370_113704463	3300010358	Tropical Forest Soil	LMGFRLRMILWIPTLAYAGFLLLGGRNLASLGQVVFAVFLGALLGFLLAAMFTMRQLRRQKRLVRLRN*
Ga0126376_101944773	3300010359	Tropical Forest Soil	MGFRLRMILWIPMLAYAGFLLLGGKNLSSLGQVFFAVFLGALLGFLLAAMFTMRQIRRERRLARLRNC*
Ga0126381_1000037878	3300010376	Tropical Forest Soil	VNLLLRMILWIPALAYTGFLLSGGRDLASLGQIVTIVFLGGLLGFLLAAMFTIRQCRRERILRLTR*
Ga0126381_1000068786	3300010376	Tropical Forest Soil	MNLLLRMILWIPALAYTGFLLFGPRNLASPGQVATIVFFGALLGFLLAVMFTMRQYRRERLAR*
Ga0126381_1009082332	3300010376	Tropical Forest Soil	MGFRLRMIIWIPTVAYAGFLLMGGKNLASMGQVVFAVFLGALQGFLLAAMFTLRQIRRKKRFARLHHC*
Ga0126381_1043112071	3300010376	Tropical Forest Soil	MGFRLRMIVWIPTLAYAGFLLSGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARLHNC*
Ga0150983_111053461	3300011120	Forest Soil	RMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGLLLAIMFTIRQHRRQRRQEIRFAR*
Ga0150983_122043982	3300011120	Forest Soil	FRLRMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRREIRFAR*
Ga0137382_101306582	3300012200	Vadose Zone Soil	MDFRWRMILWIPTLAYAAFLLLGGKTLASLGQIVTAAFLGALLGFLLAVMFTIRQHRREIRFAR*
Ga0137363_1000024132	3300012202	Vadose Zone Soil	MDFRLRMILWIPTLAYAGFLLLGGRSLASPGQVVTAAFLGALLGFLLAIMFTIRQRRRETRFAH*
Ga0137387_101730432	3300012349	Vadose Zone Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTAAFLGGLLGFLLAVMFTIRQHRRKIRFAR*
Ga0137360_101467753	3300012361	Vadose Zone Soil	MDFRWRMILWIPTLAYAAFLLLGGKTLPSLGQIVTAAFLGALLGFLLAVMFTIRQHRREIRFAR*
Ga0137358_100066595	3300012582	Vadose Zone Soil	MDFRWRMILWIPTVAYAAFLLLGGKTLPSLGQIVTAAFLGALLGFLLAVMFTIRQHRREIRFAR*
Ga0137394_101292112	3300012922	Vadose Zone Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTAAFLGALLGFLLAVMFTIRQRRREIRFAR*
Ga0137394_108508832	3300012922	Vadose Zone Soil	MDFRLRMVLWIPTLTYAAFLLLGGKNLASLGEVVFAAFQGALLGFLLAAMFSIRQHRREKRSFRLSH*
Ga0137419_100808314	3300012925	Vadose Zone Soil	MDFRLRMILWIPTLAYAAFLLLGGKTLASLGQIVTAAFLGALLGFLLAVMFTIRQHRREIRFAR*
Ga0126375_105715442	3300012948	Tropical Forest Soil	MSFQLRMIIWIPTLAYAGFLLLGGKSLASLGQVVFALFLGALLGFLLAAMFTMRQIRRQKRARLHHC*
Ga0164301_110445711	3300012960	Soil	MGFRLRMIIWIPTLAYAGFLLLGGKTLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARLRNC*
Ga0164302_118135622	3300012961	Soil	MGFRLRVIIWIPTLAYAGFLLLGGKTLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARLRNC*
Ga0126369_100051158	3300012971	Tropical Forest Soil	MGFRLRMILWIPTVAYAGFLLLGGKSLASLSQVVFALFLGALLGFLLAAMFTMRQIRRQKRFARLHHC*
Ga0126369_107925081	3300012971	Tropical Forest Soil	MGKGGLHMGFRSRMLLWIPTLSYEGCLLSGGKNIASLAQVATAGFLGATMGFLVAAMFTIRQSRRDRRRLSR*
Ga0164304_113858901	3300012986	Soil	MGFRLRMIIWIPTLAYAGFLLLGGKTLASLGQVVYAVFGALLGFLLAAMFTMRQLRREKRFARLRNC*
Ga0137409_103704063	3300015245	Vadose Zone Soil	MDFRLRMILWIPTLAYAGFLLLGGKTLVSLGQVFFTAFLGALLGFLVATMFTIRQVRRERQFAR*
Ga0132257_1038486701	3300015373	Arabidopsis Rhizosphere	MGFRLRLIIWIPMVAYAGFLLLGGKNLGSLGQVVFAVFLGALLGFLLAAMFTMRQLRREKRLVRLRN*
Ga0182034_114647841	3300016371	Soil	MGFRLRMIIWIPTVAYAGFLLMGGKHLASMGQVVFAVFLGALQGFLLAAMFTLRQIRRKKRFARLHHC
Ga0187825_102510732	3300017930	Freshwater Sediment	MAFRWRLILWIPTLAYAGFLLLGGKSLTSLGQVFTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0179592_100385253	3300020199	Vadose Zone Soil	MDFRWRMILWIPTLAYAAFLLLGGKTLPSLGQIVTAAFLGALLGFLLAVMFTIRQHRREIRFAR
Ga0210407_100188241	3300020579	Soil	MGFRFRMIVWIPTLAYAGFLLLGGKNLASLGQVVWAVFLGALLGFLLAAMFTMRQLRREKRFARLHHC
Ga0210407_105596332	3300020579	Soil	MDFRLRMVLWIPTLAYAAFLLLGGKNLDSLGQVVFAAFQGAVLGFLLAAMFSIRQHRREKRSFRFGH
Ga0210399_100177106	3300020581	Soil	MGFRFRMIVWIPTLAYAGFLLLGGKNLARWAKVVWAVFLGALLGFLLAAMFTMRQLRREKRFARLHHC
Ga0210401_100969714	3300020583	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0210401_101679513	3300020583	Soil	MDFRVRMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGLLLAIMFTIRQHRRQRRQEIRFAR
Ga0210401_108293832	3300020583	Soil	MDFRLRMILWIPALAYAGFLLLGGRNLASLGQVVFAVFLGALLGFLLATMFTIRQLRRVKRFARLRNY
Ga0210404_100298131	3300021088	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0210404_102042511	3300021088	Soil	ELLMGFRLRMILWIPTFAYVGFLLLGGKNLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0210406_103027132	3300021168	Soil	MGFRFRMIVWIPTLAYAGFLLLGGKNLASLGQVVWAVFLGALLGFLLAAMFTMRQLRREKRFARLRNC
Ga0210400_116392882	3300021170	Soil	AGGNDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC
Ga0210408_1000600014	3300021178	Soil	MGFRLRVILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC
Ga0210396_100210884	3300021180	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC
Ga0210396_116119641	3300021180	Soil	GGLMDFRLRMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGLLLAIMFTIRQHRRQRRREIRFAR
Ga0210389_104933122	3300021404	Soil	GGSDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC
Ga0210384_104675002	3300021432	Soil	MGFRLRMILWIPTFAYVGFLLLGGKNLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0210392_105904683	3300021475	Soil	MGFRMRMILWIPVLAYDGFLLFGGKNLASMGQVAYAAFLGALLGFLLAAMFTIRQLRREKRIARLRNC
Ga0187846_100587491	3300021476	Biofilm	MDFRWRMIIWIPTLAYSGFLLLGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQL
Ga0210409_101616211	3300021559	Soil	PTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRNC
Ga0126371_101053122	3300021560	Tropical Forest Soil	MSFRLRMIFWVPTLAYAGFLLLGGKNLASVGQVVFAVFQGALLGFLLAVMFTMRQLRREKRFARLRNC
Ga0126371_103363754	3300021560	Tropical Forest Soil	MGFRLRMILWIPTLAYAGFLLLCGRNLASLGQVVFAVFLGSVLGFLLAAMFTIRQLRRERRVARLRNC
Ga0126371_109675872	3300021560	Tropical Forest Soil	MGFRLRMILWIPTLAYAGFLLLGGRNLASLGQVVFAVFLGSLLGFLLAAMFTIRQLRRERRVARL
Ga0242660_10134751	3300022531	Soil	NDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQIRREKRIARLRSC
Ga0242660_10276581	3300022531	Soil	GNDLMGFRLRVILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0242660_11009722	3300022531	Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLASVGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAH
Ga0242655_101106701	3300022532	Soil	GFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0242655_103332511	3300022532	Soil	DFRFRMILWIPTLAYAAFLLLGGKNMDSLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRRELRFAR
Ga0242661_10114014	3300022717	Soil	GNDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0242657_10921381	3300022722	Soil	GGNDLMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0242665_103005861	3300022724	Soil	NDHMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0247668_10928152	3300024331	Soil	MGFRLRMIVWIPTLAYAGFLLLGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQLRREKRFARITVENRRGC
Ga0207699_108825651	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGFRLRMIVWIPTLAYAGFLLLGGKNLASLGQVVYAVFLGALLGFLLAAMFTMRQLRR
Ga0207693_108139362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQIRREKRIARLRSC
Ga0179587_105785811	3300026557	Vadose Zone Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLPSLGQVVTAAFLGALLGFLLAVMFTIRQRRREIRFAR
Ga0208575_10130842	3300026920	Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTEAFLGALLGFLLAIMFTIRQHRQLRRREI
Ga0209730_10089082	3300027034	Forest Soil	MDFRVRMILWIPTLAYAAFLLLGGKNLVSLGEVAFAVFLGALLGFLLGTMFTMRQLRREKRIARLRNC
Ga0209325_10113962	3300027050	Forest Soil	MDFRLRLILWIPTLAYAAFLLLGGKNFSSLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRQEIRFAR
Ga0209214_10004642	3300027071	Forest Soil	MDFRVRMILWIPTLAYAAFLLLGGKNFSSLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRQEIRFAR
Ga0209523_10219051	3300027548	Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNFSSLGQVVTAAFLGALLGFLLATMFTIRQLRRQKRIRPLGSFEPFD
Ga0209068_100232142	3300027894	Watersheds	MGFRLRMILWIPTLAYVGFLLLGGKNLASLGQVVTAAFLGALLGFLLAIMFTVRQHRREIRFAH
Ga0209583_102037912	3300027910	Watersheds	MDFRLRMILWIPTLAYAGFLLLGGKNLASLGQVVTAAFLGALLGFLLATMFTIRQHRREIRLAR
Ga0209698_100115143	3300027911	Watersheds	MGFRLRMILWIPTVAYAGFLLLGGKTLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0209069_102214811	3300027915	Watersheds	MNFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTAAFLGALLGFLLATMFTIRQHRREIRLAR
Ga0222749_106271771	3300029636	Soil	MDFRVRMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRREIRFAR
Ga0307482_11592671	3300030730	Hardwood Forest Soil	MAFRLRLILWIPALAYAGFLLLGGRSLTSLGAVFTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0170824_1039524022	3300031231	Forest Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQIRREKRIARLRSC
Ga0170824_1111599212	3300031231	Forest Soil	FRLRMALWIPSLAYAFLLLGGKNFALLDQDVFLAFQGAVLGFLAAAMFSIRQHRRERLFAREPRSTPLS
Ga0318541_100569272	3300031545	Soil	MGLRLRLILWIPALAYVGFLLSGGRDFAALGEIVTMAFLGALLGFLLAAMFTIRQHRRERYLQFTR
Ga0307476_10000011146	3300031715	Hardwood Forest Soil	MDFRLRMILWIPALAYAGFLLLGGKNLASLGQVVFAVFLGALLGFLLATMFTIRQLRRVKRFARLRNY
Ga0307476_100101403	3300031715	Hardwood Forest Soil	MDFRLRMVLWVPTLAYVGFLLLGGKNLVSLGEVVFAVFLGALLGFLLGTMFTMRQLRREKRFARLRNC
Ga0307474_1000002823	3300031718	Hardwood Forest Soil	MDFRLRMILWIPALAYAGFLLLGGKNLASLGQVVFAVFLGALLGFLLATMFTIRQLRRVKRFARFRNY
Ga0307477_102373983	3300031753	Hardwood Forest Soil	MAFRLRLILWIPTLAYAGFLLLGGRSLTSLGAVFTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0307477_103400732	3300031753	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQLRRQIRFAR
Ga0307475_100593212	3300031754	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQLRREIRFAR
Ga0307475_101060911	3300031754	Hardwood Forest Soil	MDFRLRMILWIPTNAYVGFLLLGGKTLASLSQVVTAAFLGALLGFLLATMFTIRQHRREKRFARLGSFEPLD
Ga0307475_101497073	3300031754	Hardwood Forest Soil	LMGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSC
Ga0318529_100723201	3300031792	Soil	FWSNCPNSKDNLMGLRLRLILWIPALAYVGFLLSGGRDFAALGEIVTMAFLGALLGFLLAAMFTIRQHRRERYLQFTR
Ga0307473_100219916	3300031820	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIVFTIRQHRRQRRREIRFAR
Ga0307473_104724431	3300031820	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNLASLGQVVTEAFLGALLGFLLAIMFTIRQLRREIRFAR
Ga0307478_100244801	3300031823	Hardwood Forest Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAVFLGALLGFLLATMFTLRQLRREKRIARLRSY
Ga0310910_100963562	3300031946	Soil	VFWSNCPNSKDNLMGLRLRLILWIPALAYVGFLLSGGRDFAALGEIVTMAFLGALLGFLLAAMFTIRQHRRERYLQFTR
Ga0307479_1000247311	3300031962	Hardwood Forest Soil	MAFRLRLILWIPTLAYAGFLLLGGKTLTSLGQVFTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0307479_101430794	3300031962	Hardwood Forest Soil	MDFRLRLILWIPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGFLLAIMFTIRQHRRQRRRESRFAC
Ga0307479_101655231	3300031962	Hardwood Forest Soil	IPTLAYAAFLLLGGKNFASLGQVVTEAFLGALLGLLLAIMFTIRQHRRQRRQEIRFAR
Ga0307470_101367853	3300032174	Hardwood Forest Soil	MGFRLRMIIWIPTLAYAGFLLLGGKTLASLGQVVFAVFLGALLGFLLAAMRQLRREKRFARLRNC
Ga0307471_1000209483	3300032180	Hardwood Forest Soil	MGFRLRMILWIPTFAYVGFLLLGGKDLTSLGQVVTAAFLGALLGFLLAIMFTLRQHRRETRFAR
Ga0307471_1000565282	3300032180	Hardwood Forest Soil	MDFRLRMVLWIPTLAYAAFLLLGGKNLASLGEVVFAAFQGALLGFLLAAMFSIRQHRREKRLSH
Ga0307471_1014439392	3300032180	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLLGGKNFASLGQVVFAVFQGALLGFLLAIMFTIRQVRRGKRFGR
Ga0307471_1042915411	3300032180	Hardwood Forest Soil	MEFRLRMILWIPTVAYAGFLLLGGKNLASLGQVVFAVFLGALLGFLLATIFTIRQLRRVKRFAGLRNY
Ga0307472_1003720421	3300032205	Hardwood Forest Soil	MGFRLRMILWIPTLAYAGFLLLGGKNLPSLGQAVYAMFLGALLGFLLATMFTLRQIRREK
Ga0307472_1019196912	3300032205	Hardwood Forest Soil	MDFRLRMILWIPTLAYAAFLLFGGKNLASLGQVVTAAFLGALLGFLLAIMFTIRQHRRQRRREIRFAR
Ga0335080_101765192	3300032828	Soil	MGFQLRLILWIPTVAYAGFLLLGGKNLASLGQVIFAVFLGALLGFLLAAMFTMRQIRRQKRFARLHQC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052782

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences