Metagenome / Metatranscriptome Family F052802

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052802
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	49 residues
Representative Sequence	EIENMAWTEVMQSDDAQLALKTFLAVDPESRRDWFESENSKNYPAYSGH
Number of Associated Samples	103
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.23 %
% of genes near scaffold ends (potentially truncated)	95.07 %
% of genes from short scaffolds (< 2000 bps)	92.96 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.366 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.803 % of family members)
Environment Ontology (ENVO)	Unclassified (38.732 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.944 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.06% β-sheet: 0.00% Coil/Unstructured: 64.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00378	ECH_1	80.28
PF03352	Adenine_glyco	3.52
PF08281	Sigma70_r4_2	1.41
PF02585	PIG-L	0.70
PF00027	cNMP_binding	0.70
PF01638	HxlR	0.70
PF07690	MFS_1	0.70
PF06772	LtrA	0.70
PF12146	Hydrolase_4	0.70
PF00355	Rieske	0.70
PF07110	EthD	0.70
PF00561	Abhydrolase_1	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	3.52
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.70
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.70
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.37 %
Unclassified	root	N/A	5.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.37 %
Unclassified	root	N/A	5.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.37 %
Unclassified	root	N/A	5.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.92 %
Unclassified	root	N/A	5.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.11 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.10 %
Unclassified	root	N/A	5.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	73.24 %
Unclassified	root	N/A	5.63 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	69.72 %
Unclassified	root	N/A	5.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	69.72 %
Unclassified	root	N/A	5.63 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	69.72 %
Unclassified	root	N/A	5.63 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Arthrobacter ramosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	69.72 %
Unclassified	root	N/A	5.63 %
Saccharopolyspora spinosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	0.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10295146	Not Available	557	Open in IMG/M
3300004479\|Ga0062595_102650866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	504	Open in IMG/M
3300005174\|Ga0066680_10396047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	878	Open in IMG/M
3300005181\|Ga0066678_10286378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1075	Open in IMG/M
3300005437\|Ga0070710_11127431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	577	Open in IMG/M
3300005440\|Ga0070705_101023291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	672	Open in IMG/M
3300005445\|Ga0070708_101472765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	635	Open in IMG/M
3300005445\|Ga0070708_102175224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	512	Open in IMG/M
3300005467\|Ga0070706_101378625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	646	Open in IMG/M
3300005467\|Ga0070706_101597372	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300005467\|Ga0070706_102131742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	506	Open in IMG/M
3300005468\|Ga0070707_100973649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	813	Open in IMG/M
3300005468\|Ga0070707_101105016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	759	Open in IMG/M
3300005471\|Ga0070698_100395182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300005471\|Ga0070698_100690311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	963	Open in IMG/M
3300005471\|Ga0070698_100844462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	860	Open in IMG/M
3300005518\|Ga0070699_100609195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	996	Open in IMG/M
3300005536\|Ga0070697_100303620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1372	Open in IMG/M
3300005536\|Ga0070697_100745219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	865	Open in IMG/M
3300005536\|Ga0070697_101294753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	650	Open in IMG/M
3300005538\|Ga0070731_10491802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	817	Open in IMG/M
3300005549\|Ga0070704_100145833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1855	Open in IMG/M
3300005556\|Ga0066707_10887260	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300005561\|Ga0066699_10658182	Not Available	750	Open in IMG/M
3300005764\|Ga0066903_101558216	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300005841\|Ga0068863_100690440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1014	Open in IMG/M
3300006028\|Ga0070717_11143932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	709	Open in IMG/M
3300006028\|Ga0070717_11373141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	642	Open in IMG/M
3300006028\|Ga0070717_11556502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	599	Open in IMG/M
3300006173\|Ga0070716_100723903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	763	Open in IMG/M
3300006175\|Ga0070712_100173025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1677	Open in IMG/M
3300006175\|Ga0070712_101911827	Not Available	520	Open in IMG/M
3300006755\|Ga0079222_10317424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1029	Open in IMG/M
3300006797\|Ga0066659_10544978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	936	Open in IMG/M
3300006852\|Ga0075433_10958509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	746	Open in IMG/M
3300006852\|Ga0075433_11703228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	543	Open in IMG/M
3300006854\|Ga0075425_100250710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2037	Open in IMG/M
3300006854\|Ga0075425_100969551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	971	Open in IMG/M
3300006854\|Ga0075425_102264225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	604	Open in IMG/M
3300006854\|Ga0075425_102750142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	542	Open in IMG/M
3300006904\|Ga0075424_100686286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1094	Open in IMG/M
3300006954\|Ga0079219_10869992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	722	Open in IMG/M
3300007076\|Ga0075435_101204156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	663	Open in IMG/M
3300007255\|Ga0099791_10638907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	522	Open in IMG/M
3300009012\|Ga0066710_104368100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	528	Open in IMG/M
3300009038\|Ga0099829_11143577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	645	Open in IMG/M
3300009088\|Ga0099830_10188529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1608	Open in IMG/M
3300009089\|Ga0099828_10307161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1427	Open in IMG/M
3300009089\|Ga0099828_11361049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	627	Open in IMG/M
3300009089\|Ga0099828_11611607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	571	Open in IMG/M
3300009089\|Ga0099828_11741006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	548	Open in IMG/M
3300009090\|Ga0099827_11546360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	578	Open in IMG/M
3300009098\|Ga0105245_10019055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6006	Open in IMG/M
3300009098\|Ga0105245_10390479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300009098\|Ga0105245_10781345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	992	Open in IMG/M
3300009137\|Ga0066709_103388820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	579	Open in IMG/M
3300009143\|Ga0099792_10596689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	703	Open in IMG/M
3300009148\|Ga0105243_10129299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2140	Open in IMG/M
3300009162\|Ga0075423_10441367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300009162\|Ga0075423_12159616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	604	Open in IMG/M
3300009520\|Ga0116214_1313372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	603	Open in IMG/M
3300010159\|Ga0099796_10260780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	723	Open in IMG/M
3300010333\|Ga0134080_10265608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	761	Open in IMG/M
3300010373\|Ga0134128_12494034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	570	Open in IMG/M
3300010375\|Ga0105239_10616767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1238	Open in IMG/M
3300010399\|Ga0134127_12205526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	630	Open in IMG/M
3300011269\|Ga0137392_10126357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2045	Open in IMG/M
3300011269\|Ga0137392_10229984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1523	Open in IMG/M
3300011269\|Ga0137392_10989822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	691	Open in IMG/M
3300011270\|Ga0137391_10081268	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300011270\|Ga0137391_10098438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2533	Open in IMG/M
3300011270\|Ga0137391_10756359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	804	Open in IMG/M
3300011271\|Ga0137393_10976768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	721	Open in IMG/M
3300011271\|Ga0137393_11776943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	505	Open in IMG/M
3300012096\|Ga0137389_10589791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	955	Open in IMG/M
3300012189\|Ga0137388_10365954	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300012202\|Ga0137363_11151280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	660	Open in IMG/M
3300012202\|Ga0137363_11520260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	561	Open in IMG/M
3300012203\|Ga0137399_10980889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	711	Open in IMG/M
3300012205\|Ga0137362_11026149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	702	Open in IMG/M
3300012207\|Ga0137381_11532647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	558	Open in IMG/M
3300012208\|Ga0137376_11768160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	509	Open in IMG/M
3300012210\|Ga0137378_10820152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	843	Open in IMG/M
3300012362\|Ga0137361_10318567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1425	Open in IMG/M
3300012362\|Ga0137361_11469638	Not Available	604	Open in IMG/M
3300012363\|Ga0137390_11469601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	623	Open in IMG/M
3300012363\|Ga0137390_11473757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	622	Open in IMG/M
3300012582\|Ga0137358_10620637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	725	Open in IMG/M
3300012917\|Ga0137395_10459146	Not Available	915	Open in IMG/M
3300012918\|Ga0137396_10447018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	958	Open in IMG/M
3300012923\|Ga0137359_11009712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	714	Open in IMG/M
3300012925\|Ga0137419_11032606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	682	Open in IMG/M
3300012927\|Ga0137416_10308476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1314	Open in IMG/M
3300012927\|Ga0137416_10984836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	753	Open in IMG/M
3300012927\|Ga0137416_11606946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	592	Open in IMG/M
3300012927\|Ga0137416_11947608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	538	Open in IMG/M
3300012930\|Ga0137407_11568407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	627	Open in IMG/M
3300012960\|Ga0164301_11341052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	582	Open in IMG/M
3300012984\|Ga0164309_10534377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	904	Open in IMG/M
3300012989\|Ga0164305_10093789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1907	Open in IMG/M
3300013308\|Ga0157375_13375101	Not Available	532	Open in IMG/M
3300015264\|Ga0137403_10742744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	840	Open in IMG/M
3300015358\|Ga0134089_10292503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	675	Open in IMG/M
3300015374\|Ga0132255_104446315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300017792\|Ga0163161_11249281	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300018468\|Ga0066662_11802471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	640	Open in IMG/M
3300021168\|Ga0210406_10319746	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300021170\|Ga0210400_10480171	Not Available	1026	Open in IMG/M
3300021307\|Ga0179585_1028616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	529	Open in IMG/M
3300021478\|Ga0210402_10090295	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300022722\|Ga0242657_1241532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	514	Open in IMG/M
3300025905\|Ga0207685_10710036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	548	Open in IMG/M
3300025910\|Ga0207684_10399135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1182	Open in IMG/M
3300025915\|Ga0207693_10070272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2740	Open in IMG/M
3300025915\|Ga0207693_10141994	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300025915\|Ga0207693_10228935	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300025915\|Ga0207693_10525730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	923	Open in IMG/M
3300025915\|Ga0207693_10997474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300025916\|Ga0207663_10091681	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300025922\|Ga0207646_10229873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1676	Open in IMG/M
3300025928\|Ga0207700_11314096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	644	Open in IMG/M
3300025929\|Ga0207664_10235961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1591	Open in IMG/M
3300025939\|Ga0207665_10070390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2387	Open in IMG/M
3300025939\|Ga0207665_10946256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	684	Open in IMG/M
3300025940\|Ga0207691_11238535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora spinosa	618	Open in IMG/M
3300025986\|Ga0207658_11068892	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300026295\|Ga0209234_1306283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	510	Open in IMG/M
3300027671\|Ga0209588_1197704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	627	Open in IMG/M
3300027846\|Ga0209180_10097799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	1670	Open in IMG/M
3300027869\|Ga0209579_10330225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	824	Open in IMG/M
3300027882\|Ga0209590_10559530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	737	Open in IMG/M
3300027903\|Ga0209488_10815111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	660	Open in IMG/M
3300028536\|Ga0137415_10922755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	683	Open in IMG/M
3300031231\|Ga0170824_114702437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	538	Open in IMG/M
3300031718\|Ga0307474_10481222	Not Available	972	Open in IMG/M
3300031753\|Ga0307477_10159795	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300031753\|Ga0307477_10828252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	614	Open in IMG/M
3300031962\|Ga0307479_11247745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	706	Open in IMG/M
3300031962\|Ga0307479_11588809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	609	Open in IMG/M
3300032174\|Ga0307470_11697811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	531	Open in IMG/M
3300032180\|Ga0307471_100666399	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300032205\|Ga0307472_101996879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter ramosus	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.21%
Host-Associated	Host-Associated	14.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.21%
Plants	Host-Associated → Plants	14.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.15%
Loam	Environmental → Terrestrial → Soil → Loam	26.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	24.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.11%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_102951461	3300002914	Grasslands Soil	MAWTEVMQSDDARLALKTCIAVDPDSRRDWFESKNSKNYPAYAGH*
Ga0062595_1026508661	3300004479	Soil	ADANLQAAFEIENMAWTEVMQSDDARVALKNIIAVDPESRRDWFESENSKHYPAYAGH*
Ga0066680_103960472	3300005174	Soil	QAAFEIENMAWTEVMQSDGAQLALKTFIAVDPDSRRDWFESENSKNYPTYAGH*
Ga0066678_102863781	3300005181	Soil	IENMNWTEVMQSDDARLALKTFLAVDPASRRDWFETASSKTYPAYSGH*
Ga0070710_111274312	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IEDMNWTEVMQSDDAQLAMTTVLGLKPENARDWFEAESSNDYPTYSGH*
Ga0070705_1010232912	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TEVMQSDDAQLALKSINAVDPDSRRDWFESENSKNYPAYVGH*
Ga0070708_1014727651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QAAFEIENMAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPTYAGH*
Ga0070708_1021752242	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AFEIENMAWTEVMQSDDAQLALESINAVDPESRRDWFESENSKNYPAYSGH*
Ga0070706_1013786252	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GADTNLQAAFEIENMMWTEVIQSDDVQVALKTFLAVDPASRRDWFESENSKNYPTYSGH*
Ga0070706_1015973722	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QAAFEIENMMWTEVIQSDDAQVALKTFLAVDPDLRRDWFESENSKNYPAYSGH*
Ga0070706_1021317421	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AAFEIENMAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0070707_1009736492	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAWTEVMQSDDAQLALKTFIAVNPDSRRDWFESENSKNYPAYAGH*
Ga0070707_1011050161	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VMQSDDAKVALKTFLSVDPASRRDWFESANSMNYPTYSGR*
Ga0070698_1003951823	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FEIENMAWTEVMQSDDAQLALTTFLAVDADSRRDWFESENSKNYPAYVGQ*
Ga0070698_1006903112	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQSDDARLALKTCIAVDPDSRRDWFESENSKHYPAYAGH*
Ga0070698_1008444621	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AAFEIENMAWTEVMQSDDAQIALKSINAVDPDSRRDWFESENSKNYPAYVGH*
Ga0070699_1006091951	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	NLQAAFEIENMNWTEVIQSDDAKVALSTFLAVDPDERRDWFESANSKNYPTYSGH*
Ga0070697_1003036201	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EVMQSDDAKVALKTFLDVDPGSRRDWFESANSKNYPAYSGH*
Ga0070697_1007452192	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IEDMNWTEVMQSDDAQLAMTTVLGLKPESARDWFEAESSNDYPTYSGH*
Ga0070697_1012947531	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AYEIENMNWTEVMQSDDAQLAMTTILAVDPKSARDWFEESSTGTYPAYSGH*
Ga0070731_104918021	3300005538	Surface Soil	AFEVENMNWTEVMQSDDAKVALGTFLAVDPASRRDWFESESTKTYPAYSGH*
Ga0070704_1001458335	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ENMMWTEVIQSDDAQVALKTFLAVDPDSRRDWFESENSKNYPAYSGH*
Ga0066707_108872602	3300005556	Soil	LQAAYEIENMQWTEVMQSDDAQLALKTFLAVDPDSRRDWFESENSKNYPAYSGH*
Ga0066699_106581823	3300005561	Soil	NMQWTEVMQSDDAQLALQAYIAEGLDARRDWFESASSKRYPAYSGQ*
Ga0066903_1015582163	3300005764	Tropical Forest Soil	AQLALKAFIAVDPDSRRDWFESENSKNYPTYSGH*
Ga0068863_1006904402	3300005841	Switchgrass Rhizosphere	DAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH*
Ga0070717_111439322	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QAAFEIEDMNWTEVMQSDDAQLAMTTILGLNPENARDWFESENSKNYPTYSGQ*
Ga0070717_113731412	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GADANLQAAFEIENMAWTEVMQSDDAQLALKTCVGVDPDSRRDWFESENSKNYPAYAGH*
Ga0070717_115565022	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VENMNWTEVMQSDDAKVALKTFLAVNPACRRDWFESANSKNYPTYSGH*
Ga0070716_1007239031	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ADANLQAAFEIENMAWTEVMQSDDAQLALKTCVGVDPDSRRDWFESENSKNYPAYAGH*
Ga0070712_1001730251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FEIEDMNWTEVMQSDDAQLAMTTILGVDPANARDWFESKSSSSYPTYSGH*
Ga0070712_1019118271	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IEDMNWTEVMQSDDAQLAMTTILGLNPENARDWFESKNSKSYPSYSGH*
Ga0079222_103174242	3300006755	Agricultural Soil	AAYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH*
Ga0066659_105449781	3300006797	Soil	AAYEIENMNWTEVMQSDDAKVALKTFLDVDPASRRDWFESANSKNYPAYSGH*
Ga0075433_109585092	3300006852	Populus Rhizosphere	ENMNWTEVIQSDDAQLALKTCIAVDPESRRDWFESESSKRYPAYSGH*
Ga0075433_117032281	3300006852	Populus Rhizosphere	VALSAFLAVDPSSRRDWFESESTKTYPAYSGQRDFRCHS*
Ga0075425_1002507103	3300006854	Populus Rhizosphere	NLQAAYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH*
Ga0075425_1009695513	3300006854	Populus Rhizosphere	ENMMWTEVIQSDDAQVALRTFLAVDPDSRRDWFESENSKNYPAYSGH*
Ga0075425_1022642251	3300006854	Populus Rhizosphere	AAYEIENMNWTEVMQSDDAKVALKTFLDVDPGSRRDWFESANSKNYPAYSGH*
Ga0075425_1027501421	3300006854	Populus Rhizosphere	AAYEIENMNWTEVMQSDDAQLALKTFLAVDPASRRDWFETASSKTYPSYSGH*
Ga0075424_1006862861	3300006904	Populus Rhizosphere	AFEIEDMNWTEVMQSDDAQLAMTTILGLNPENARDWFESENSKNYPTYTGH*
Ga0079219_108699921	3300006954	Agricultural Soil	QGADTNLQAAYEIENMNWTEVMQSDDAQLAMTTILAVDPQSARDWFEEPSTGTYPTYSGH
Ga0075435_1012041561	3300007076	Populus Rhizosphere	AYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH*
Ga0099791_106389071	3300007255	Vadose Zone Soil	NMNWTEVMQSDDAKVALSTFLAVDQDERRDWFESANSKNYPTYSGH*
Ga0066710_1043681002	3300009012	Grasslands Soil	MGADANLEAAFEIENMAWTEVMQSDDARVALESINAVDPESRRDWFESENSKNYPTYAGH
Ga0099829_111435772	3300009038	Vadose Zone Soil	ENMAWTEVMQSDDARVALKTCIAVDPDSRRDWFESKNSKNYPAYAGH*
Ga0099830_101885291	3300009088	Vadose Zone Soil	QAGFEIENMAWTEVMQSDDARVALKTCVDAEPDSRRNWFESANSPNYPAYSGH*
Ga0099828_103071611	3300009089	Vadose Zone Soil	ENMNWTEVMQSDDAKVALKTFLDVKPASRRNWFESANSKNYPTYSGH*
Ga0099828_113610492	3300009089	Vadose Zone Soil	LQAAFEIENMAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0099828_116116072	3300009089	Vadose Zone Soil	FEIENMAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0099828_117410062	3300009089	Vadose Zone Soil	RALYLGADTNLQAAFEIENMNWTEVIQSDDAQLALKTCIAIDPESRRDWFESESSKSYPAYSGH*
Ga0099827_115463602	3300009090	Vadose Zone Soil	QSDDARLALKTCIAVDPDSRRDWFESKNSKNYPAYAGH*
Ga0105245_100190557	3300009098	Miscanthus Rhizosphere	YLGADTNLQAAFEVENMMWTEVIQSDDAQVALKTFLAVDPDSRRDWFESENSKNCPAYSGH*
Ga0105245_103904791	3300009098	Miscanthus Rhizosphere	NLEAAFEVENINWTEVMQSDDAKVALGAFLAVEPASRRDWFESRSTKTYPAYSGH*
Ga0105245_107813452	3300009098	Miscanthus Rhizosphere	EIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH*
Ga0066709_1033888201	3300009137	Grasslands Soil	EIENMMWTEVIQSDDVQVALKTFLAVDPDSRRDWFESENSKNYPTYSGH*
Ga0099792_105966891	3300009143	Vadose Zone Soil	SNLRAANEIANMNWTEVMQSDDAQLALSSFLAVDPASRRDWFESASSKSYPAYSGH*
Ga0105243_101292991	3300009148	Miscanthus Rhizosphere	DDAQLALKTCIAVDPESRRDWFESESSKSYPAYSGH*
Ga0075423_104413671	3300009162	Populus Rhizosphere	AAFEIENMMWTEVIQSDDAQVALKTFLAVDPASRRDWFESENSKNYPTYSGH*
Ga0075423_121596161	3300009162	Populus Rhizosphere	ENMNWTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPTYSGH*
Ga0116214_13133721	3300009520	Peatlands Soil	AYEIENMNWTEVMQSDDAKVALSTFLAVDPDERRDWFESANSKNYPTYSGH*
Ga0099796_102607802	3300010159	Vadose Zone Soil	FEIENMNWTEVIQSDDAQLALKTCIAVDPESRRDWFESESSKTYPAYSGH*
Ga0134080_102656082	3300010333	Grasslands Soil	DDAQVALKTFLAVDPASRRDWFESENSKNYPTYSGH*
Ga0134128_124940342	3300010373	Terrestrial Soil	LQAAFEVENMNWTEVVQSDDARLALKTCIAVDPESRRDWFESESSKSYPAYSGH*
Ga0105239_106167671	3300010375	Corn Rhizosphere	NMMWTEVIQSDDAQVALKTFRSVDPDSRREWFESESSKTYPEYSGH*
Ga0134127_122055262	3300010399	Terrestrial Soil	LQAAFEIENMNWTEVMQSDDAKVALSTFLDVDPGSRRDWFESANSKNYPAYSGH*
Ga0137392_101263574	3300011269	Vadose Zone Soil	TEVMQSDDAQLALKSINAVDPDSRRDWFESENSKNYPAYAGH*
Ga0137392_102299842	3300011269	Vadose Zone Soil	VMQSDDAQLALKTFLEVDPASRRDWFETKGSKTYPTYSGH*
Ga0137392_109898221	3300011269	Vadose Zone Soil	FEIENMAWTEVMQSDDARVALESINAVDPESRRDWFESPNSKNYPAYAGH*
Ga0137391_100812684	3300011270	Vadose Zone Soil	NLQAAYEIENMNWTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPTYSGH*
Ga0137391_100984382	3300011270	Vadose Zone Soil	VATNDGQLALKTFIAVDPDSRRDWFDSENSKNYPAYAGH*
Ga0137391_107563592	3300011270	Vadose Zone Soil	GADTNLQAAFEIENMMWTEVIQSDDAQVALKTFLAVDADSRRDWFESENSKNYPTYSGH*
Ga0137393_109767681	3300011271	Vadose Zone Soil	NLQAAYEIENMNWTEVMQSDDAKVALKTFLDVDPASRRDWFESANSKNYPAYSGH*
Ga0137393_117769432	3300011271	Vadose Zone Soil	EVENMNWTEVMQSDDAKLALSTFLAMDPASRREWFESESTKTYPAYSGH*
Ga0137389_105897912	3300012096	Vadose Zone Soil	ANLQAALEIENMAWTEVVQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0137388_103659543	3300012189	Vadose Zone Soil	DSNLQAAFEVENMNWTEVMQSDDAQVALSTFLAVDPASRRDWFESESTKTYPAYTGH*
Ga0137363_111512802	3300012202	Vadose Zone Soil	NWTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPTYSGR*
Ga0137363_115202601	3300012202	Vadose Zone Soil	AAFEIENMAWTEVMQSDDARVALESINAVDPESRRDWFESENSKNYPAYAGH*
Ga0137399_109808891	3300012203	Vadose Zone Soil	DTNLQAAFEIENMAWTEVMQSDDAQLALKTFVAVDPDSRRDWFESENSKNYPAYAGH*
Ga0137362_110261491	3300012205	Vadose Zone Soil	EVIQSDDAQVALKAILAVDPDSGRDWFESENSKNYPTYSGH*
Ga0137381_115326471	3300012207	Vadose Zone Soil	ENMNWTEVMQSDDARVALSTFLAVDPASRRDWFESESTKTYPAYAGH*
Ga0137376_117681601	3300012208	Vadose Zone Soil	DDAKVALKTFLDVDPGSRRDWFESANSKNYPAYSGH*
Ga0137378_108201522	3300012210	Vadose Zone Soil	AAFEIENMMWTEVIQSDDAQLALKTFLAVDADSRRDWFESENSKNYPTYSGR*
Ga0137361_103185674	3300012362	Vadose Zone Soil	WTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPTYSGR*
Ga0137361_114696381	3300012362	Vadose Zone Soil	EIENMAWTEVMQSDDAQLALKTFLAVDPESRRDWFESENSKNYPAYSGH*
Ga0137390_114696011	3300012363	Vadose Zone Soil	SDDAQIALKSINAVDPDSRRDWFESENSKNYPVYAGH*
Ga0137390_114737572	3300012363	Vadose Zone Soil	YLVATNDGQLALKTFIAVDPDSRRDWFDSENSKNYPAYAGH*
Ga0137358_106206372	3300012582	Vadose Zone Soil	NMAWTEVMQSDDAQLALKSINAVDPESRRDWFESENSKNYPAYAGH*
Ga0137395_104591462	3300012917	Vadose Zone Soil	VMQSDDARLALKTYIAEGLDSRRDWFESENSKNYPTYSGK*
Ga0137396_104470182	3300012918	Vadose Zone Soil	TEVIQSDDAQLALKACIAVNPDSRRDWFESENSNTYPTYTGH*
Ga0137359_110097121	3300012923	Vadose Zone Soil	LQAAFEFENMAWTEVMQSDDAQLALKTCVAVAPDSRRDWFESENSKNYPAYAGH*
Ga0137419_110326062	3300012925	Vadose Zone Soil	MNWTEVMQSDDAKVALKTFLDVDPASRRDWFESANSKNYPAYSGH*
Ga0137416_103084761	3300012927	Vadose Zone Soil	EIENMAWTEVMQSDDAQLALKTFLAVDPDARRDWFESENSKNYPAYAGH*
Ga0137416_109848362	3300012927	Vadose Zone Soil	FEIENMNWTEVIQSDDAQLALKTCIALDPESRRDWFESESSKSYPAYSGH*
Ga0137416_116069462	3300012927	Vadose Zone Soil	SDDARVALESINAVEPGSRRDWFESANSKNYPAYAGH*
Ga0137416_119476082	3300012927	Vadose Zone Soil	YLGADANLQAAFEIENMAWTEVMQSDDAQLALKTCIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0137407_115684072	3300012930	Vadose Zone Soil	ENMAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPAYAGH*
Ga0164301_113410522	3300012960	Soil	QAAFEIENMMWTEVIQSDDAQVALKTFVAVDPDSRRDWFESENSKNYPTYSGH*
Ga0164309_105343772	3300012984	Soil	HLQAAFEIEDMNWTEVMQSDDAQLAMTTILGLNPENARDWFESENSKNYPTYSGH*
Ga0164305_100937891	3300012989	Soil	LGADTNLQAAFEVENMMWTEVIQSDDAQVALKTFLAVDPDSRRDWFESENSKNYPAYSGH
Ga0157375_133751011	3300013308	Miscanthus Rhizosphere	IQSDDAQVALKTFRSVDPDSRRDWFESESSKTYPEYTGH*
Ga0137403_107427441	3300015264	Vadose Zone Soil	ALYLGADSSLQAASEVENMNWADVMQSEDAQLALKTFLAVDPGSRRDWFESANTKNYPTYSGH*
Ga0134089_102925031	3300015358	Grasslands Soil	TEVIQSDDAQVALKTFLAVDPASRRDWFESENSKNYPTYSGH*
Ga0132255_1044463152	3300015374	Arabidopsis Rhizosphere	WTEVMQSDDAQLALRTYIAEEPDSRRDWFESKNSKNYPTYTGH*
Ga0163161_112492811	3300017792	Switchgrass Rhizosphere	QAAFEVENMMWTEVIQSDDAQVALKTFLAVDPDSRRDWFESENSKNCPAYSGH
Ga0066662_118024712	3300018468	Grasslands Soil	DDAQLALKTFLAVDPDSRRDWFESENSKNYPAYAGH
Ga0210406_103197463	3300021168	Soil	IENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH
Ga0210400_104801712	3300021170	Soil	DDAQLALETYIAEDLDSRRDWFESESAKNYPTYSGH
Ga0179585_10286162	3300021307	Vadose Zone Soil	QSDDAQLALKTFLAVDPDSRRDWFESENSKNYPAYAGH
Ga0210402_100902954	3300021478	Soil	AYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKSYPAYSGH
Ga0242657_12415322	3300022722	Soil	ENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH
Ga0207685_107100362	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	NWTEVMQSDDAQLAMTTILAVDPKSARDWFEESSTGTYPTYSGH
Ga0207684_103991351	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TEVMQSDDAQLALKTCIAVDPDSRRDWFESENSKHYPAYAGH
Ga0207693_100702725	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DMNWTEVMQSDDAQLAMTTILGVDPANARDWFESKSSSSYPTYSGH
Ga0207693_101419943	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ENMNWTEVMQSDDAQLAMTTILAVDPKSARDWFEESSTGTYPTYSGH
Ga0207693_102289353	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ASEIEDMNWTEVMQSDDAQLAMTTILGLNPENARDWFESKNSKSYPSYSGH
Ga0207693_105257301	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LYMGADANLEAAFEIENMAWTEVMQSDDAELALKSINAVDPDSRRDWFESENSKNYPAYVGH
Ga0207693_109974743	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AAFEIENMAWTEVMQSNDAQLALKTCVGVDPDSRRDWFESENSKNYPAYAGH
Ga0207663_100916814	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH
Ga0207646_102298733	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	WVLRGGIVRPEVMQSDDAQLALSSFLSVDPASRRDWFESSSTKTYPAYSGH
Ga0207700_113140961	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TEVMQSDDAQLAMTTILAVDPKSARDWFEETSTGTYPVYSGH
Ga0207664_102359612	3300025929	Agricultural Soil	MNWTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPAYSGH
Ga0207665_100703903	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	NMNWTEVMQSDDAKVALKTFLDVDPGSRRDWFESVNSKNYPAYSGH
Ga0207665_109462562	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DTNLQAAFEIENMNWTEVIQSDDAQLALKTCIAVDPESRRDWFESESSKSYPAYSGH
Ga0207691_112385351	3300025940	Miscanthus Rhizosphere	ADTNLQAAFEIENMMWTEVIQSDDAQLALETCVAVDPDSRRDWFESDSSNSYPTYTGH
Ga0207658_110688921	3300025986	Switchgrass Rhizosphere	VENMMGTEVIQSDDAQVALKTFLAVDPDSRRDWFESENSKNCPAYSGH
Ga0209234_13062832	3300026295	Grasslands Soil	MAWTEVMQSDDAQLALKTFIAVDPDSRRDWFESENSKNYPTYDGH
Ga0209588_11977041	3300027671	Vadose Zone Soil	AAFEIENMAWTEVMQSDDAQLALKTFLAVDPDSRRDWFESENSKNYPAYAGH
Ga0209180_100977991	3300027846	Vadose Zone Soil	QAAYEIENMNWTEVMQSDDAKVALKTFLDVNPASRRDWFESANSKNYPTYSGH
Ga0209579_103302252	3300027869	Surface Soil	MNWAEVMQSDDAKLALSTFLAVDPASRRDWFEPESTKTYPAYAGH
Ga0209590_105595301	3300027882	Vadose Zone Soil	SDDAQLALKTCIAVDPDSRRDWFESKNSKNYPAYAGH
Ga0209488_108151112	3300027903	Vadose Zone Soil	VMQSDDAQLALGNFLGVDPASRRDWFESASSKSYPAYSGH
Ga0137415_109227552	3300028536	Vadose Zone Soil	AFEIENMAWTEVMQSDDARVALESINAVEPGSRRDWFESANSKNYPAYAGH
Ga0170824_1147024371	3300031231	Forest Soil	EIENMNWTEVMQSDDAKLALRTFLAVDPTSRREWFESVSTKTYPAYSGN
Ga0307474_104812221	3300031718	Hardwood Forest Soil	EDMNWTEVMQSDDAQLAMTTILAVDPKSARDWFEESSTGTYPTYSGH
Ga0307477_101597953	3300031753	Hardwood Forest Soil	SDDAQVALKTSVAVDPDSRRDWFESENSKNYPTYSGH
Ga0307477_108282522	3300031753	Hardwood Forest Soil	SNLQAAFEVENMNWTEVMQSDDAKVALSTFLAVDPASRREWFESESTKTYPAYSGH
Ga0307479_112477451	3300031962	Hardwood Forest Soil	AAFEVENMNWTEVMQSDDAKLALSTFLAVDPASRREWFESESTKTYPAYSGH
Ga0307479_115888091	3300031962	Hardwood Forest Soil	ETENMNWTEVMQSDDAQLALKTFLAVEPASRRDWFETPSTKTYPAYAGS
Ga0307470_116978111	3300032174	Hardwood Forest Soil	SNLQAAYEIENMNWTEVMQSDDAKVALSTFVAVDPDERRDWFESANSKNYPAYSGH
Ga0307471_1006663991	3300032180	Hardwood Forest Soil	FEIENMAWTEVMQSDDARLALKSINAVDPDSRRDWFESENSKNYPAYVGH
Ga0307472_1019968791	3300032205	Hardwood Forest Soil	FEIENMAWTEVMQSDDAQLALKSINAVDPDSRRDWFESENSKNYPAYVGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences