NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052811

Metagenome / Metatranscriptome Family F052811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052811
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 54 residues
Representative Sequence KAAAEAHTPMPATEAAFRVNSDELAHHNEDDFSAVLRRMEEVAGIAAVHSASIAS
Number of Associated Samples 126
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.86 %
% of genes near scaffold ends (potentially truncated) 92.25 %
% of genes from short scaffolds (< 2000 bps) 87.32 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.915 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.718 % of family members)
Environment Ontology (ENVO) Unclassified
(20.423 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.183 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.19%    β-sheet: 0.00%    Coil/Unstructured: 51.81%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF00248Aldo_ket_red 9.15
PF00561Abhydrolase_1 6.34
PF13510Fer2_4 5.63
PF14376Haem_bd 3.52
PF07690MFS_1 3.52
PF14552Tautomerase_2 2.11
PF02518HATPase_c 2.11
PF14833NAD_binding_11 1.41
PF07228SpoIIE 1.41
PF04879Molybdop_Fe4S4 1.41
PF07681DoxX 1.41
PF12697Abhydrolase_6 1.41
PF12833HTH_18 1.41
PF02604PhdYeFM_antitox 0.70
PF00582Usp 0.70
PF00196GerE 0.70
PF03479PCC 0.70
PF05977MFS_3 0.70
PF13490zf-HC2 0.70
PF03150CCP_MauG 0.70
PF13518HTH_28 0.70
PF00111Fer2 0.70
PF07080DUF1348 0.70
PF08308PEGA 0.70
PF00378ECH_1 0.70
PF00115COX1 0.70
PF02129Peptidase_S15 0.70
PF00589Phage_integrase 0.70
PF03446NAD_binding_2 0.70
PF07731Cu-oxidase_2 0.70
PF04216FdhE 0.70
PF01654Cyt_bd_oxida_I 0.70
PF01799Fer2_2 0.70
PF13240zinc_ribbon_2 0.70
PF13442Cytochrome_CBB3 0.70
PF03928HbpS-like 0.70
PF01370Epimerase 0.70
PF07732Cu-oxidase_3 0.70
PF13628DUF4142 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 1.41
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.41
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.41
COG1271Cytochrome bd-type quinol oxidase, subunit 1Energy production and conversion [C] 0.70
COG1661Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domainGeneral function prediction only [R] 0.70
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 0.70
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.70
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.70
COG3058Formate dehydrogenase maturation protein FdhEPosttranslational modification, protein turnover, chaperones [O] 0.70
COG3558Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamilyFunction unknown [S] 0.70
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.92 %
UnclassifiedrootN/A14.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104842447All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300002561|JGI25384J37096_10175834All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300002907|JGI25613J43889_10114503All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300003218|JGI26339J46600_10010647All Organisms → cellular organisms → Bacteria2683Open in IMG/M
3300003218|JGI26339J46600_10047234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1162Open in IMG/M
3300004082|Ga0062384_101045038All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300004092|Ga0062389_103521967All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300004152|Ga0062386_101717244All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300004153|Ga0063455_101385075All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300004635|Ga0062388_100123141All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1911Open in IMG/M
3300004635|Ga0062388_100653520Not Available973Open in IMG/M
3300005174|Ga0066680_10651500All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300005176|Ga0066679_10303308All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005471|Ga0070698_100426919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1260Open in IMG/M
3300005533|Ga0070734_10503809Not Available690Open in IMG/M
3300005540|Ga0066697_10605543Not Available607Open in IMG/M
3300005541|Ga0070733_11180794All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300005555|Ga0066692_10202368Not Available1243Open in IMG/M
3300005568|Ga0066703_10097736All Organisms → cellular organisms → Bacteria1722Open in IMG/M
3300005610|Ga0070763_10011387All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3680Open in IMG/M
3300005921|Ga0070766_10038675All Organisms → cellular organisms → Bacteria2636Open in IMG/M
3300006086|Ga0075019_10652702All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300006173|Ga0070716_100444190All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300006423|Ga0075039_1252148All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300006426|Ga0075037_1851945All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006642|Ga0075521_10499148All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300006854|Ga0075425_102651234All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300006893|Ga0073928_10720296All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300007255|Ga0099791_10648602Not Available518Open in IMG/M
3300009038|Ga0099829_10624968All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium895Open in IMG/M
3300009038|Ga0099829_10748585All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300009038|Ga0099829_11749029All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300009088|Ga0099830_10326213All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300009090|Ga0099827_11698945All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium550Open in IMG/M
3300009143|Ga0099792_10477986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M
3300009518|Ga0116128_1093184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium896Open in IMG/M
3300009629|Ga0116119_1143366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300009638|Ga0116113_1166133All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300010379|Ga0136449_102715508All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300011269|Ga0137392_11271784All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300011269|Ga0137392_11571421All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300011270|Ga0137391_10803042All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium775Open in IMG/M
3300012096|Ga0137389_11469226All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300012189|Ga0137388_10181040All Organisms → cellular organisms → Bacteria1888Open in IMG/M
3300012202|Ga0137363_10245632All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300012202|Ga0137363_10284571All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300012203|Ga0137399_10647359All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300012285|Ga0137370_10477110All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300012351|Ga0137386_10859762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300012361|Ga0137360_10898028All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300012362|Ga0137361_11234046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium671Open in IMG/M
3300012683|Ga0137398_11051523All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300012917|Ga0137395_10399251All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300012917|Ga0137395_10692796All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300012927|Ga0137416_10561071All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium990Open in IMG/M
3300012927|Ga0137416_10866530All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300012929|Ga0137404_10423597Not Available1177Open in IMG/M
3300012929|Ga0137404_10800011All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300012944|Ga0137410_10589506All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300014155|Ga0181524_10220389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300014162|Ga0181538_10701547All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300014165|Ga0181523_10689107All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300014501|Ga0182024_10013678All Organisms → cellular organisms → Bacteria15793Open in IMG/M
3300014838|Ga0182030_11136116All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300015053|Ga0137405_1302744All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300016750|Ga0181505_11089353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300017933|Ga0187801_10351851All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300017946|Ga0187879_10329560All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300017995|Ga0187816_10229790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium808Open in IMG/M
3300018006|Ga0187804_10402161Not Available606Open in IMG/M
3300018009|Ga0187884_10268705All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300018013|Ga0187873_1304456Not Available585Open in IMG/M
3300018018|Ga0187886_1254729All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300018019|Ga0187874_10062561Not Available1692Open in IMG/M
3300018030|Ga0187869_10250383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium858Open in IMG/M
3300018433|Ga0066667_10606926All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium913Open in IMG/M
3300019786|Ga0182025_1001821All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_31161Open in IMG/M
3300019786|Ga0182025_1317051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300019788|Ga0182028_1340066All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300019890|Ga0193728_1061380Not Available1806Open in IMG/M
3300020580|Ga0210403_11395522Not Available531Open in IMG/M
3300020583|Ga0210401_11247841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300021088|Ga0210404_10848618All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300021171|Ga0210405_10505968All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300021401|Ga0210393_10152087All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300021420|Ga0210394_11017047All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300021433|Ga0210391_11578600All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300021477|Ga0210398_10660143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium847Open in IMG/M
3300021477|Ga0210398_11091470All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300024227|Ga0228598_1132909All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300025434|Ga0208690_1014121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1503Open in IMG/M
3300025916|Ga0207663_10069119All Organisms → cellular organisms → Bacteria2271Open in IMG/M
3300025939|Ga0207665_10526587All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300026295|Ga0209234_1028509All Organisms → cellular organisms → Bacteria2119Open in IMG/M
3300026309|Ga0209055_1021612All Organisms → cellular organisms → Bacteria3082Open in IMG/M
3300026316|Ga0209155_1252153All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300026334|Ga0209377_1024190All Organisms → cellular organisms → Bacteria3012Open in IMG/M
3300026358|Ga0257166_1028055All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300026497|Ga0257164_1017185All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300027371|Ga0209418_1084835All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300027698|Ga0209446_1069324Not Available898Open in IMG/M
3300027767|Ga0209655_10008112All Organisms → cellular organisms → Bacteria3579Open in IMG/M
3300027767|Ga0209655_10017618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2403Open in IMG/M
3300027825|Ga0209039_10122666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1098Open in IMG/M
3300027825|Ga0209039_10259337All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300027853|Ga0209274_10182630All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300027867|Ga0209167_10766099All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300027911|Ga0209698_10319914Not Available1225Open in IMG/M
3300027911|Ga0209698_11403375Not Available509Open in IMG/M
3300028731|Ga0302301_1138838All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300028795|Ga0302227_10046537All Organisms → cellular organisms → Bacteria2026Open in IMG/M
3300028867|Ga0302146_10304840All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300029701|Ga0222748_1121778All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300029915|Ga0311358_11106440All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium534Open in IMG/M
3300029943|Ga0311340_11469962All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300029944|Ga0311352_10799459All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium737Open in IMG/M
3300029945|Ga0311330_10120179All Organisms → cellular organisms → Bacteria2573Open in IMG/M
3300029986|Ga0302188_10341093All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300029999|Ga0311339_11339712All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300030043|Ga0302306_10281165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300030044|Ga0302281_10248698All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300030057|Ga0302176_10011906All Organisms → cellular organisms → Bacteria3285Open in IMG/M
3300030503|Ga0311370_12415775All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300030524|Ga0311357_10754499All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum878Open in IMG/M
3300030617|Ga0311356_10053892All Organisms → cellular organisms → Bacteria4287Open in IMG/M
3300031028|Ga0302180_10474276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300031057|Ga0170834_107124384Not Available763Open in IMG/M
3300031231|Ga0170824_107376652All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300031231|Ga0170824_126484921All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300031234|Ga0302325_10040079All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9486Open in IMG/M
3300031236|Ga0302324_100619996All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1546Open in IMG/M
3300031241|Ga0265325_10460291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300031525|Ga0302326_10996215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1178Open in IMG/M
3300031720|Ga0307469_11091658All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300031820|Ga0307473_10942714Not Available626Open in IMG/M
3300032174|Ga0307470_11887961Not Available508Open in IMG/M
3300032180|Ga0307471_101318266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium884Open in IMG/M
3300032180|Ga0307471_102282495Not Available682Open in IMG/M
3300032261|Ga0306920_100174341All Organisms → cellular organisms → Bacteria → Proteobacteria3207Open in IMG/M
3300032515|Ga0348332_11066226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium918Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.72%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.15%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil8.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.52%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.82%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.82%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.11%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.11%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.11%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.11%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.11%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost2.11%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.11%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.41%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.41%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.41%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.70%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.70%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.70%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.70%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.70%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.70%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006423Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006426Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300027069Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028731Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028795Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1EnvironmentalOpen in IMG/M
3300028867Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030044Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10484244723300000364SoilMTKDFRLILEAAAQEHIVMPVTMAAFRINEDDLAHDQEADFSAVLRRMEEAAGIEIAHSAR*
JGI25384J37096_1017583433300002561Grasslands SoilPLRLMHKDFQLILKAAAQQHLPMPATEAAFRVNSDELAHNDEADFSAVLRRMEEVAGITAIHAAPVTS*
JGI25613J43889_1011450323300002907Grasslands SoilLILKAAEQEHLPMPATESAFRVNSDELAHNDEEDFSAVLRRMEEVAGITALHSAPVTS*
JGI26339J46600_1001064763300003218Bog Forest SoilATEAAFRVNSDELEHGGEEDFSAVLRRMEEVAGIAPVHSAPETNRSAAMKRPMAK*
JGI26339J46600_1004723423300003218Bog Forest SoilQLTMPATEAAFRVNSDELEHGGEEDFSAVLRRMEEVAGIAPVHSAPATSRLAATKRPMAQ
Ga0062384_10104503823300004082Bog Forest SoilILEAAAQVRVTMPATEAAFRVNSDELAHNAEEDFSAVLKRMEEVAGIAPAHSNQ*
Ga0062389_10352196723300004092Bog Forest SoilEAHIPLPVTEAAFQVNSEELSDHNEDDFSAVLRRMEEVAGIADVHSASIAS*
Ga0062386_10171724413300004152Bog Forest SoilAQVHVPMPATEAAFRVNSDEMAHNAEEDFSAVLRRMEEVAGIAAAHSNQ*
Ga0063455_10138507523300004153SoilLMHKDFQLILDAAAQEQFPMPATQAAFYVNSDELENHPEEDFSAVLRRMEEIAGVEGIRSASVIS*
Ga0062388_10012314133300004635Bog Forest SoilNKDFQLILKAAAEAHTPMPVTEAAFRVNSEELAHDDQGDFSAVLRRMEEVAGMVDIRTAFMTI*
Ga0062388_10065352043300004635Bog Forest SoilSVPMPVTEAAFRVNSEELAHGGEEDFSAVLRRMEEVAGKAA*
Ga0066680_1065150023300005174SoilILKAAAEGDISMPVTEAAFRVNADELPHANEEDFSAVLRRMEEVAGIARIPSAPVPAVPGTKSGE*
Ga0066679_1030330813300005176SoilDFELILNAASKEHVRMPATEAAFYVNSEELAGGDDEDFSAVLRRMEEIAGGANVLA*
Ga0070698_10042691913300005471Corn, Switchgrass And Miscanthus RhizosphereVSMPATEAAFYVNSEEMSANNERDFSAVLRRMEEAAGIKAIPSDSATG*
Ga0070734_1050380923300005533Surface SoilAAFHVNSDELAGGEEEDFSAVVRRMEEIAGIAADRSAPVAS*
Ga0066697_1060554313300005540SoilAAEENVPMPVTEAAFRVNADELASGQEQDFSAVMRRMEDLAGVALTHSTR*
Ga0070733_1118079423300005541Surface SoilMPATEAAFYVNSGELARGEEEDFSAVLRRMEEVEGHQAIPSEPVTN*
Ga0066692_1020236813300005555SoilILNAAAQEHIPMPATEAAFRVNSDELAHHDEEDFSAVLRRMEEVAGIAAFTRNQ*
Ga0066703_1009773613300005568SoilLNAAAQEHIPMPATEAAFRVNSDELAHHDEDDFSAVLRRMEEVAGIAAFTRNQ*
Ga0070763_1001138713300005610SoilLILEAAAQENVAMPATEAAFYVNSEELARNAEEDFSAVLRRMEEVAGVEGI*
Ga0070766_1003867513300005921SoilEHVSMPATEAAFYVNSEELAGSDNEDFSAVLRRMEQAAGFEAIPSAPATK*
Ga0075019_1065270223300006086WatershedsAHIPLPVTEAAFYVNSEELAHHDGDDFSAVLRRMEEVAGIADIHPASIAS*
Ga0070716_10044419013300006173Corn, Switchgrass And Miscanthus RhizosphereAHEHISMPVTEAAFRINSDELAHANEEDFSAVLRRMEEDAGIAPIKSAPVAG*
Ga0075039_125214823300006423Permafrost SoilEHVPMPATDAAFRVNADELASGDEEDFSAVLRRMERVAGVAAISAFTRR*
Ga0075037_185194513300006426Permafrost SoilILEAAAKEHLSLPATEAAYRVNSDELAQGNEEDFSAVLRRMEELAGIEVGH*
Ga0075521_1049914813300006642Arctic Peat SoilAAAQVHVPMPVTEAAFRVNEDELTHDQEEDFSAVLKRMEEVAGIAPAHSTK*
Ga0075425_10265123413300006854Populus RhizosphereILKAAAQEHLPMPATEAAFRINSAELAQNDDADFSAVLRRMEELADIKAIHAPSVTGSS*
Ga0073928_1072029623300006893Iron-Sulfur Acid SpringAEAHIPMPATEAAFRVNSEESAQRAEDDFSAVLRRMEDVAGIADIHSDSMRS*
Ga0099791_1064860223300007255Vadose Zone SoilQASAQEHVFMPATVAAFRVNSDELTDNNNNEEDFSAVLRRMEDVAGVASIDLHPVTT*
Ga0099829_1062496813300009038Vadose Zone SoilILEAATQEKIAMPATEASFYVNSDELARDAEQDFSAVLRRMEEVAGIDGVQLRR*
Ga0099829_1074858523300009038Vadose Zone SoilKDFQLILKAAAREHLPMPVTEAAFRVNSDELAHNDEEDFSAVLRRMEEVAGIAAIHSAPVTS*
Ga0099829_1174902913300009038Vadose Zone SoilAAEVHIPMPATEAAFRVNSDELAHHDEEDFSAVLRRMEEVAGIAAFTRNQ*
Ga0099830_1032621323300009088Vadose Zone SoilKAAAQEHVPMPATEAAFRVNAEELANSDEQDFSAVLRRMEKVAGIAAIGADAAEV*
Ga0099827_1169894513300009090Vadose Zone SoilLILKAAAREHLSMPLTDAAFRVNSDELTHSAEEDFSAVLRRMEDIAGITAMHPAPATS*
Ga0099792_1047798613300009143Vadose Zone SoilMNKDFELILKAAAREHLSMPATQAAFAANSEELVGDDEKDFSSVLRRMEEVAGIEATRSDALTR*
Ga0116128_109318423300009518PeatlandTAAEAHTPMPATEAAFRVNSEELAQHNEDDFSAVLWRMEEAAGIADVHSASMTS*
Ga0116119_114336613300009629PeatlandTAAEAHTPMPATEAAFRVNSEELAQHNEDDFSAVLRRMEEAAGIADVHSASMTS*
Ga0116113_116613323300009638PeatlandHVPMPVTEAASRVNSEELAHHNEEDFSAVLRRMEEVAGIADIHTASIAS*
Ga0136449_10271550813300010379Peatlands SoilHKDFQLILDTAAQEHVPMPATEAAFRVNSDELAHSNEEDFSAVLRRMEELAGIAAADSPPAKS*
Ga0137392_1127178413300011269Vadose Zone SoilFDLILNAAAKAQVRMPATEAAFYVNSEELAGENDEDFSAVLRRMEEVAGIANPLVSHTV*
Ga0137392_1157142123300011269Vadose Zone SoilLILEAAAQERVSMPATEAAFYVNSDELARTDEEDFSAVLRRMEEAAGIATIPSALATS*
Ga0137391_1080304223300011270Vadose Zone SoilLEAAAQERVSMPATEAAFYVNSDELARTDEEDFSAVLRRMEEAAGIATIPSALATS*
Ga0137389_1146922623300012096Vadose Zone SoilLMNKDFQLILKAAQENIFMPATVAAFRVNSDELAHNEEEDFSAVLRRMEEVAGLATIDLDPVTS*
Ga0137388_1018104013300012189Vadose Zone SoilDFQLILEAAAQENIAMPATEAAFYVNSDEAAHNAEEDFSAVVRRMEELAGIAAVDSVR*
Ga0137363_1024563213300012202Vadose Zone SoilAAAQEHFPMPATAAAFRVNSDELAHNDEQDFSAVLQRMETVAGIAAMQSAPVTS*
Ga0137363_1028457113300012202Vadose Zone SoilKEAAQEHIDMPATEAAFRVNSDELARDDEEDFSAVVRRMEEVAGIANTQ*
Ga0137399_1064735913300012203Vadose Zone SoilAAAQEHIPMPVTEAAFRVNSDELAHNDDEDFSAVLRRMEGVAGIAPVYSPR*
Ga0137370_1047711013300012285Vadose Zone SoilNKDFQLILNAAAQEHIPMPATEAAFRVNSDELAHRDGEDFSAVLRRMEEVAGIAAFTRSQ
Ga0137386_1085976213300012351Vadose Zone SoilMNKDFQLILKTAARENVPMPATEAAFRVNADQLVLGDEQDFSAVLHRMEEVAGVAVTHSTP*
Ga0137360_1089802813300012361Vadose Zone SoilMPVTEAAFRVNSDELAHNDEEDFSAVLRRMEGVAGIPAIYSPR*
Ga0137361_1123404613300012362Vadose Zone SoilAAEENVPMPVTEAAFRVNADELAPGEEQDFSAVLRRMEELAGVALTHSPR*
Ga0137398_1105152313300012683Vadose Zone SoilAAADGHIPMPATEAAFQVNSEELAHHDEEDFSAVLRRMEEVAGIADIHSASMTR*
Ga0137395_1039925113300012917Vadose Zone SoilKDFQLILKAAAEERIPMPVTEAAFRVNSAELAQNDEEDFSAVLRRMEEVAGIAASHSEPVTS*
Ga0137395_1069279613300012917Vadose Zone SoilAQENIFMPATVAAFRVNSDELAHDEEEDFSAVLRRMEEVAGLATIDLDPVTS*
Ga0137416_1056107113300012927Vadose Zone SoilMNKDFQLILKAAAEAHIPMPATEAAFRVNSDELAHHDEDDFSAVLRQMEEVAGIADVHSASMTS*
Ga0137416_1086653013300012927Vadose Zone SoilEHINMPATEAAFRVNSMELAHNGEADFSAVVRRMEEVAGVAATHSR*
Ga0137404_1042359723300012929Vadose Zone SoilNAAAQEHIPMPATEAAFRVNSDELAHRDEEDFSAVLRRMEEVAGIAAFTRSQ*
Ga0137404_1080001113300012929Vadose Zone SoilMNKDFQLILKAAADGHIPMPATEAAFQVNSEELAHHDEEDFSAVLRRMEEVARIAQIHSAPMMR*
Ga0137410_1058950613300012944Vadose Zone SoilEHVSMPVTEAAFRVNSDELAHSDEEDFSAVLRRMEGVAGIAPVYSPR*
Ga0181524_1022038913300014155BogMPVTEAASRVNSEELAHHNEEDFSAVLRRMEEVAGIADIHTASIAS*
Ga0181538_1070154723300014162BogPAAEAAFRVNSEELAHHDEDDFSAVLRRMEEVAGIADIHSASIAS*
Ga0181523_1068910713300014165BogPMPATEAAFRVNSDELARDHEDDFSAVLRRMEEVAGIGDIHSASIAS*
Ga0182024_10013678153300014501PermafrostMNKDFQLILKAAAEAHTHMPASEAAFRVNSEELAHHNEDSFSAVLRRMEEVANIADVHSASVTS*
Ga0182030_1113611613300014838BogAAQEHVPMPVTEAAFRVNSDELAHSEEEDFSAVLRRMEELAA*
Ga0137405_130274413300015053Vadose Zone SoilMNKDFQLILNAAAQEHIPMPATEAAFRVNSDELAHRDEEDFSAVLRRMEEVAGIAAFTGSQ*
Ga0181505_1108935323300016750PeatlandAKEHVSMPATEAAFYVNSEELAGNNHDKDFSAVLRRMEEVAGIELTPSHTVIG
Ga0187801_1035185123300017933Freshwater SedimentKAAAEAHLPLPATEAAFRVNSEELAQHNEDDFSAVLRRMEEVAGITDIQSASLAS
Ga0187879_1032956023300017946PeatlandLILQAAAQEHVPMPVTEAAFRVNADELLHSEEEDFSAVLRRMEKVAGNAA
Ga0187816_1022979013300017995Freshwater SedimentDFELILQAAAKEHVSMPATEAAFHVNSEELAVDKEKDFSAVLRRMEQVAGF
Ga0187804_1040216123300018006Freshwater SedimentLDTAAQEHVPLPATEAAFRVNSDGLAHSNEEDFAAVLRRMEELAV
Ga0187884_1026870523300018009PeatlandLKAAAEAHTPMPATEAAFRVNSEELAHHDEDDFSAVLRRMEDVAGIADIHSASMAS
Ga0187873_130445613300018013PeatlandATEAAFRANSEELAQHKEDDFSAVLRRMEDVAGITDIHSASLAS
Ga0187886_125472913300018018PeatlandAAEAHTPMPATEAAFRVNSEELAQHNEDDFSAVLRRMEEAAGIADVHSASMTS
Ga0187874_1006256133300018019PeatlandNKDFQLILKAAAEAHIPLPATEAAFRVNSEELAQHKEDDFSAVLRRMEDVAGITDIHSASLAS
Ga0187869_1025038323300018030PeatlandILKAAAKEHVSMPATEAAFYVNSEELAGNNHDKDFSAVLRRMEEVAGVELTPSHTVIG
Ga0066667_1060692613300018433Grasslands SoilMNKDFQLILDAAAQDGVSMPATEAAFYVNSDELERNAEADFSAVLKRMEEVAGINYSAATVTS
Ga0182025_100182123300019786PermafrostKEHVSMPATEAAFYVNSKELAGADDEDFSAVLRRMEEAAALEAIPSNPVTR
Ga0182025_131705123300019786PermafrostMPATEAAFRVNSEELAHHNEDDFSAVLRRMEEVAGIADLHSASIAS
Ga0182028_134006613300019788FenFGLILRAAAKTDVSMPVTEAAFRVNSEELAASGDEDFSAVLRRMEEVAGIANLAVSRAS
Ga0193728_106138033300019890SoilQEHLPMPVTEAAFRVNSDELAQNDEEDFSAVLRRMEEVAGIASFHSAPVTS
Ga0210403_1139552213300020580SoilAAAAKEQLRMPATEAAFHVNSDELARNNSEEDFSAVLRQMEVLAGIGTIHSTSLAS
Ga0210401_1124784113300020583SoilMPATEVAFRVNSDELAHNSQEDFSAVLRQMEELAGIANVHSTPVAS
Ga0210404_1084861823300021088SoilKDFQLILRAAAEAHIPMPATEAAFRVNSEELAHHDEDDFSAVLRRMEEVAGIADIHSAPMTS
Ga0210405_1050596813300021171SoilAAAKEQFRMPATEAAFHVNSDELAGNNKYDEDFSAVLRQMEVLAGIATIHSARLAG
Ga0210393_1015208723300021401SoilMNKDFKLILEAAAEAHTPMPATEAALHVNSEELAYGEEEDFSAVLRRMEDLAGIAVDRSAQVAS
Ga0210394_1101704723300021420SoilKAAAREHVLMPATEAAFYVNSEELPGEVDEDFSAVLRRMEQAAGLEAIGPNLVTK
Ga0210391_1157860013300021433SoilAAAEAHTPMPATEAAFRVNSDELARDHEDDFSAVLRRMEEVAGIADIRTASIAS
Ga0210390_1094434113300021474SoilTRAAFRVNSNELANNNEEDFSAVVRQMEILADIATIHSTPVAS
Ga0210398_1066014313300021477SoilDFELILKAAAKTHVSMPATEAAFYVNSEELSGNNEKDFSAVLRRMEEAAGIEVIPSDPVT
Ga0210398_1109147023300021477SoilLILRTAAKGHVRMPATEAAFYVNAEELAGGDEEDFSAVLRRMEETAGVYAIPPEPATK
Ga0228598_113290913300024227RhizosphereAAAHFPMPATEAAFQVNSEEMAHHDVEDFSAVLRRMEEVAGIADIHSGSIAS
Ga0208690_101412123300025434PeatlandNKDFQLILKEAAETHIPMPVTEAAFRVNSEELAQHNEDDFSAVLRRMEEVAGIADFHSAPMAS
Ga0207663_1006911913300025916Corn, Switchgrass And Miscanthus RhizosphereAAADGRIPMPATEAAFRVNSEELAHHDEEDFSAVLRRMEEVASIAEIHSAPTMR
Ga0207665_1052658723300025939Corn, Switchgrass And Miscanthus RhizosphereDFQLILQAAAQENIFMPATVAAFRVNSDELAHSDEEDFSAVLRRMEEVAGLATIDLDPVT
Ga0209234_102850943300026295Grasslands SoilIPMPATEAAFRVNSDELAHHDEEDFSAVLRRMEEVAGIAAFTRNQ
Ga0209055_102161253300026309SoilLNAAAQEHIPMPATEAAFRVNSDELAHHDEEDFSAVLRRMEEVAGIAAFTRNQ
Ga0209155_125215313300026316SoilMPATEAAFRVNSDELAHRDGEDFSAVLRRMEEVAGIAAFTGSQ
Ga0209377_102419053300026334SoilLILNAAAQEHIPMPATEAAFRVNSDELAHHDEEDFSAVLRRMEEVAGIAAFTRNQ
Ga0257166_102805533300026358SoilAADGHIPMPATEAAFRVNSEELAHQDEEDFSAVLRRMEEVASIAEIHSAPTMR
Ga0257164_101718513300026497SoilEHLPMPVTEAAFRVNSDELAHNDEEDFSAVLRRMEEVAGIGAIHSAPVTS
Ga0208859_101942923300027069Forest SoilRAAFRVNSDELANNNEEDFSAVVRQMEILADIATIHSTPVAS
Ga0209418_108483513300027371Forest SoilILKAAAKEHVSMPATEAAFYVNSEELADNNEKDFSAVLRRMEEAAGIEAVS
Ga0209446_106932423300027698Bog Forest SoilHVSMPATEAAFRVNSDELAHSNEEDFSAVLRRMEELAGIAAADSPLAKS
Ga0209655_1000811213300027767Bog Forest SoilLSMPATEAAFRINSDELARHDEEDFSAVLRRMEEVAGIAEIQSASIAS
Ga0209655_1001761843300027767Bog Forest SoilMPATDAALQVNSEELASGEEEDFSAVLRRMEQLAGIAADRSARVAS
Ga0209039_1012266623300027825Bog Forest SoilEQLTMPATEAAFRVNSDELEHGGEEDFSAVLRRMEEVAGIAPVHSAPATSRLAATKRPMA
Ga0209039_1025933713300027825Bog Forest SoilMPATEAAFRVNSDELEHGGEEDFSAVLRRMEEVAGIAPVHSAPGTSRFAATKRAMAK
Ga0209274_1018263023300027853SoilAAAEAHIPMPATEAAFRVNSDELARDHEDDFSAVLRRMEEVAGIGDIHSASIAS
Ga0209167_1076609913300027867Surface SoilMPATEAAFYVNSGELARGEEEDFSAVLRRMEEVEGHQAIPSEPVTN
Ga0209698_1031991413300027911WatershedsAHLPLPATEAAFRVNSEELAQHNEDDFSAVLRRMEEVAGITDIQSASLAS
Ga0209698_1140337513300027911WatershedsEAAFYVNSEELSSDDDQDFSAVLRRMEQAAGLEATPSDPVTG
Ga0302301_113883813300028731PalsaVTEAAFRVNAEELTHHKEDDFSTVLRRMEEVAGIANLHPASLAS
Ga0302227_1004653713300028795PalsaKEAAEAHISMPVTEAAFRVNAEELTHHKEDDFSTVLRRMEEVAGIANLHPASLAS
Ga0302146_1030484013300028867BogLSAATEAHLSMPMTESAFRVNAEELADHDEEDFSAVLRRMEEVAGIADLHSTR
Ga0222748_112177813300029701SoilLKAAADAHIPMPATEAAFQVNSEELAHHDRDDFSAVLRRMEEVAGIADLHSASIAR
Ga0311358_1110644023300029915BogILKSAAEAHTPMPVTEAAFQVNSEELSEHNEDDFSAVVRRMEEVAGVAVLHPASIAS
Ga0311340_1146996213300029943PalsaFQLILRAAAQEHVPMPVTEAAFRVNSDELANSEEEDFSAVLRRMEEVAGNAA
Ga0311352_1079945923300029944PalsaNKDFELILNAAAKAHLSMPVTEAAFRVNSEELAHHDEEDFSAVLRRMEEVAGIGDIDSASIAS
Ga0311330_1012017953300029945BogKAAAEGHTSMPATEAAFRVNSEELAHHDQDDFSAVLRRMEEVAGIADIHSASMAS
Ga0302188_1034109313300029986BogILSAATEAHLSMPMTESAFRVNAEELADHDEEDFSAVLRRMEEVAGIADLHSTR
Ga0311339_1133971213300029999PalsaPATEAAFYVNSEELAGGEEEDFSAVLRRMDEVAGLQAVPSESVTK
Ga0302306_1028116513300030043PalsaMPATEAAFRVNSEELAHHNEDDFSAVLRRMEEVAGIAAVHSASIAS
Ga0302281_1024869813300030044FenFQLILSAATEAHLSMPMTESAFRVNAEELADHDEEDFSAVLRRMEEVAGIADLHSTR
Ga0302176_1001190663300030057PalsaDFELILNAAAKAHLSMPVTEAAFRVNSEELAHHDEEDFSAVLRRMEEVAGIGDIDSASIA
Ga0311370_1241577513300030503PalsaAAAQEHVPMPVTEAAFRVNSDELANSEEEDFSAVLRRMEEVAGNAA
Ga0311357_1075449923300030524PalsaKDFQLILREASQEGLAMPATEAAFRVNSDELARGVEEDFSAVLRRMEEVAASRPSKA
Ga0311356_1005389213300030617PalsaISMPVTEAAFRVNAEELTHHKEDDFSTVLRRMEEVAGIANLHPASLAS
Ga0302180_1047427613300031028PalsaKAAAEAHTPMPATEAAFRVNSDELAHHNEDDFSAVLRRMEEVAGIAAVHSASIAS
Ga0170834_10712438413300031057Forest SoilAAQARVAMPVTEAAFHVNLDELAHHAEEDFSAVVRRMEEVAGIDHRVVTMVS
Ga0170824_10737665213300031231Forest SoilKDFQLILDAAAQARVAMPVTEAAFHVNLDELAHHAEEDFSAVVRRMEEVAGIDHRVVTMV
Ga0170824_12648492123300031231Forest SoilQLILAAAAREHVPMPVTEAAFRVNAEELAGSKEEDFSAVLRRMEEVSVIAAVSAIHPEVA
Ga0302325_1004007913300031234PalsaAAKGHVRMPATEAAFYVNSEELAGGEEEDFSAVLRRMDEVAGLQAVPSESVTK
Ga0302324_10061999633300031236PalsaILNAAAKAHLSMPVTEAAFRVNSEELAHHDEEDFSAVLRRMEEVAGIGDIDSASIAS
Ga0265325_1046029123300031241RhizosphereEAHTPMPATEAAFRVNSEELAHHDEDDFSAVLRRVEEVAGVADLHSASMAS
Ga0302326_1099621513300031525PalsaMPATEAAFRVNSEELVHHDEEDFSAVLRRMEEVAGIGDSHSASMAS
Ga0307469_1109165823300031720Hardwood Forest SoilIPMPATEAAFRVNSEELAHHDEEDFSAVLRRMEEVASIAEIHSAPTMR
Ga0307473_1094271413300031820Hardwood Forest SoilLKAAAQEHVPMPVTEAAFRVNSDELAHNDEEDFSAVLRRMEGVAGLAAVYSPR
Ga0307470_1188796113300032174Hardwood Forest SoilFELILKAAAKEHVSMPATQAAFYVNSEELVGGDEKDFSAVLLRMEEVAGVAAMSAAQ
Ga0307471_10131826613300032180Hardwood Forest SoilPMRLMHKDFELILNAASKEHVRMPSTEAAFYVNSEELAGGDDEDFSAVLRRMEEIAGIANVLA
Ga0307471_10228249523300032180Hardwood Forest SoilAAAQEHVPMPVTEAAFRVNSDELAHNDEEDFSAVLRRMEGVAGLAAVYSPR
Ga0306920_10017434113300032261SoilFQLILKTSARENVTMPATEAAFRVNADEWAQSEEEDFSAVMRRMEEAAGITLGKTAQ
Ga0348332_1106622623300032515Plant LitterMNKDFQLILKAAADAHIPMPATEAAFQVNSEELAHHDRDDFSAVLRRMEEVAGIADLHSASIAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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