Metagenome / Metatranscriptome Family F052816

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052816
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	67 residues
Representative Sequence	FVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNIDRILTYSDYRPGADGPYSVSR
Number of Associated Samples	107
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.51 %
% of genes near scaffold ends (potentially truncated)	85.92 %
% of genes from short scaffolds (< 2000 bps)	79.58 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.465 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.606 % of family members)
Environment Ontology (ENVO)	Unclassified (28.873 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.930 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.45% β-sheet: 37.63% Coil/Unstructured: 55.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF05170	AsmA	11.97
PF00011	HSP20	2.82
PF13502	AsmA_2	2.82
PF01103	Omp85	2.82
PF01740	STAS	2.11
PF04041	Glyco_hydro_130	1.41
PF05532	CsbD	1.41
PF04055	Radical_SAM	1.41
PF13545	HTH_Crp_2	1.41
PF00691	OmpA	1.41
PF03401	TctC	0.70
PF00072	Response_reg	0.70
PF06210	DUF1003	0.70
PF09834	DUF2061	0.70
PF08281	Sigma70_r4_2	0.70
PF01569	PAP2	0.70
PF00856	SET	0.70
PF13180	PDZ_2	0.70
PF00588	SpoU_methylase	0.70
PF01406	tRNA-synt_1e	0.70
PF04972	BON	0.70
PF11154	DUF2934	0.70
PF04191	PEMT	0.70
PF08327	AHSA1	0.70
PF00589	Phage_integrase	0.70
PF01594	AI-2E_transport	0.70
PF00487	FA_desaturase	0.70
PF13188	PAS_8	0.70
PF02702	KdpD	0.70
PF02736	Myosin_N	0.70
PF08335	GlnD_UR_UTase	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	11.97
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.82
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	1.41
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.41
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.70
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.70
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.70
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.70
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.70
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.70
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.46 %
Unclassified	root	N/A	22.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.46 %
Unclassified	root	N/A	22.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.46 %
Unclassified	root	N/A	22.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.68 %
Unclassified	root	N/A	22.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.41 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	39.44 %
Unclassified	root	N/A	22.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.44 %
Unclassified	root	N/A	22.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.11 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.44 %
Unclassified	root	N/A	22.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.82 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.41 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.44 %
Unclassified	root	N/A	22.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.82 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.41 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	39.44 %
Unclassified	root	N/A	22.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.82 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.41 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101496000	Not Available	606	Open in IMG/M
3300001471\|JGI12712J15308_10043061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300001545\|JGI12630J15595_10076631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300001593\|JGI12635J15846_10004824	All Organisms → cellular organisms → Bacteria	11657	Open in IMG/M
3300001593\|JGI12635J15846_10616396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300001593\|JGI12635J15846_10818033	Not Available	533	Open in IMG/M
3300001867\|JGI12627J18819_10402276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	557	Open in IMG/M
3300002245\|JGIcombinedJ26739_100283397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300002245\|JGIcombinedJ26739_101572672	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300002910\|JGI25615J43890_1073298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	592	Open in IMG/M
3300004100\|Ga0058904_1388512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300004104\|Ga0058891_1545513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300004104\|Ga0058891_1546775	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004120\|Ga0058901_1490197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	645	Open in IMG/M
3300004152\|Ga0062386_100010310	All Organisms → cellular organisms → Bacteria	6633	Open in IMG/M
3300004479\|Ga0062595_100507893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300004631\|Ga0058899_10129135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300004643\|Ga0062591_100035770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2659	Open in IMG/M
3300005186\|Ga0066676_10005814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5731	Open in IMG/M
3300005340\|Ga0070689_101993940	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005406\|Ga0070703_10584284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005467\|Ga0070706_100389935	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005467\|Ga0070706_100656683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	973	Open in IMG/M
3300005468\|Ga0070707_100959926	Not Available	820	Open in IMG/M
3300005468\|Ga0070707_101672587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005542\|Ga0070732_10292152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	978	Open in IMG/M
3300005561\|Ga0066699_10796095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	666	Open in IMG/M
3300005842\|Ga0068858_102325908	Not Available	530	Open in IMG/M
3300005843\|Ga0068860_100048465	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300006173\|Ga0070716_100313326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300006175\|Ga0070712_101425579	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300006176\|Ga0070765_102070349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	532	Open in IMG/M
3300006176\|Ga0070765_102179639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300006358\|Ga0068871_102001668	Not Available	551	Open in IMG/M
3300006755\|Ga0079222_12339913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	534	Open in IMG/M
3300007255\|Ga0099791_10296527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300009012\|Ga0066710_103119079	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300009088\|Ga0099830_10114117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2036	Open in IMG/M
3300009088\|Ga0099830_11780546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009090\|Ga0099827_11643122	Not Available	560	Open in IMG/M
3300009098\|Ga0105245_10035474	All Organisms → cellular organisms → Bacteria	4426	Open in IMG/M
3300009672\|Ga0116215_1224569	Not Available	824	Open in IMG/M
3300010396\|Ga0134126_12148215	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300011120\|Ga0150983_11113221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300011120\|Ga0150983_13138374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300011120\|Ga0150983_15947413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300011269\|Ga0137392_10888434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300011271\|Ga0137393_11768752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012096\|Ga0137389_11285905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012189\|Ga0137388_10817412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300012202\|Ga0137363_10401647	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300012207\|Ga0137381_11057560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300012211\|Ga0137377_10767622	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300012285\|Ga0137370_10253299	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300012363\|Ga0137390_10428949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300012582\|Ga0137358_10270505	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300012582\|Ga0137358_10572181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300012918\|Ga0137396_10225653	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300012957\|Ga0164303_11209411	Not Available	553	Open in IMG/M
3300012960\|Ga0164301_10326888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300013297\|Ga0157378_10042030	All Organisms → cellular organisms → Bacteria	4055	Open in IMG/M
3300014501\|Ga0182024_10057138	All Organisms → cellular organisms → Bacteria	6081	Open in IMG/M
3300014968\|Ga0157379_10037497	All Organisms → cellular organisms → Bacteria	4322	Open in IMG/M
3300015054\|Ga0137420_1169171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300015054\|Ga0137420_1215305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300015054\|Ga0137420_1237713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300017823\|Ga0187818_10487775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300017933\|Ga0187801_10055094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300017955\|Ga0187817_10496514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300018017\|Ga0187872_10054831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2117	Open in IMG/M
3300018040\|Ga0187862_10750352	Not Available	568	Open in IMG/M
3300018433\|Ga0066667_11875637	Not Available	545	Open in IMG/M
3300020579\|Ga0210407_10085718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2378	Open in IMG/M
3300020579\|Ga0210407_10116492	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300020579\|Ga0210407_10197773	All Organisms → cellular organisms → Bacteria → Acidobacteria	1561	Open in IMG/M
3300020579\|Ga0210407_11446549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300020580\|Ga0210403_10556156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300020581\|Ga0210399_11175805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300020583\|Ga0210401_10080496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3066	Open in IMG/M
3300020583\|Ga0210401_10654226	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300021046\|Ga0215015_10810317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300021046\|Ga0215015_10956104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021046\|Ga0215015_10994936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021168\|Ga0210406_10004686	All Organisms → cellular organisms → Bacteria	14543	Open in IMG/M
3300021168\|Ga0210406_10860836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300021171\|Ga0210405_10456364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300021171\|Ga0210405_11261547	Not Available	544	Open in IMG/M
3300021178\|Ga0210408_11512362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300021181\|Ga0210388_10293355	All Organisms → cellular organisms → Bacteria → Acidobacteria	1428	Open in IMG/M
3300021432\|Ga0210384_10692412	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300021474\|Ga0210390_10149417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1967	Open in IMG/M
3300021479\|Ga0210410_10174797	All Organisms → cellular organisms → Bacteria → Acidobacteria	1919	Open in IMG/M
3300021479\|Ga0210410_10981633	Not Available	733	Open in IMG/M
3300021559\|Ga0210409_10309578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300021559\|Ga0210409_11721459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300024290\|Ga0247667_1059474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300024330\|Ga0137417_1477690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1725	Open in IMG/M
3300025441\|Ga0208456_1020718	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300025905\|Ga0207685_10568583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300025906\|Ga0207699_10302691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300025910\|Ga0207684_11717704	Not Available	505	Open in IMG/M
3300025915\|Ga0207693_11146476	Not Available	589	Open in IMG/M
3300025915\|Ga0207693_11296907	Not Available	545	Open in IMG/M
3300025922\|Ga0207646_10446387	Not Available	1167	Open in IMG/M
3300025939\|Ga0207665_10500506	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300026361\|Ga0257176_1030272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300026376\|Ga0257167_1058674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300026557\|Ga0179587_11111360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300027071\|Ga0209214_1053390	Not Available	548	Open in IMG/M
3300027576\|Ga0209003_1092177	Not Available	568	Open in IMG/M
3300027678\|Ga0209011_1001391	All Organisms → cellular organisms → Bacteria → Acidobacteria	8779	Open in IMG/M
3300027729\|Ga0209248_10246013	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300027842\|Ga0209580_10451728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300027853\|Ga0209274_10212885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300028047\|Ga0209526_10030314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3801	Open in IMG/M
3300028047\|Ga0209526_10613566	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300028047\|Ga0209526_10759847	Not Available	604	Open in IMG/M
3300028536\|Ga0137415_10015619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7530	Open in IMG/M
3300028906\|Ga0308309_11402802	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300030659\|Ga0316363_10042040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	2237	Open in IMG/M
3300031057\|Ga0170834_102503247	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031128\|Ga0170823_14954050	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300031128\|Ga0170823_16921469	Not Available	657	Open in IMG/M
3300031708\|Ga0310686_102820143	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031708\|Ga0310686_105788232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300031718\|Ga0307474_10004850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9682	Open in IMG/M
3300031720\|Ga0307469_11749808	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300031740\|Ga0307468_100077192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1880	Open in IMG/M
3300031754\|Ga0307475_10607050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300031962\|Ga0307479_10402294	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300032180\|Ga0307471_102626299	Not Available	638	Open in IMG/M
3300032180\|Ga0307471_102713286	Not Available	628	Open in IMG/M
3300032205\|Ga0307472_100927254	Not Available	809	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.07%
Host-Associated	Host-Associated	4.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.44%
Aquatic	Environmental → Aquatic	5.63%
Plants	Host-Associated → Plants	4.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.44%
Freshwater	Environmental → Aquatic → Freshwater	5.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.41%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.75%
Loam	Environmental → Terrestrial → Soil → Loam	30.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.11%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1014960001	3300000955	Soil	VLKQTNIGDAVWAPQRLEVRGSARILFLKSLAVERIFTYSDYRLEADGPYSVSRLP*
JGI12712J15308_100430611	3300001471	Forest Soil	VARVQRGSHIILEQTRLTDAVWVPKRLEVRASARILLLKSLDLDRILTYSDYHRATDGPYSVSR*
JGI12630J15595_100766312	3300001545	Forest Soil	VKVDGQVTQSFSMGLFVARVQRGSHIVLEQTCMGDGIWVPKRIEVRANARVLFLKSLNIERILTYSDYRSVEDGPYSASR*
JGI12635J15846_1000482415	3300001593	Forest Soil	SMGLFVARVQRGSHIILEQTCVGDGVWVPRRLEVRASARILFLKNLDMDRILTYSDYRPAADGAYSVSK*
JGI12635J15846_106163961	3300001593	Forest Soil	EVTQPFSMGLFVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNIDRILTYSDYRPGADGPYSVSR*
JGI12635J15846_108180332	3300001593	Forest Soil	KMDGEVTQSFAVGLFVARVGRGSHIILEQMSVGDAVWMPKRVEVRASARILFLKTLDMDRILNYSDYLATTDSAYSANR*
JGI12627J18819_104022762	3300001867	Forest Soil	MGLFVAHMQRGSHIILEQTCVGDAIWVPKRLEVRASARIFFVKSLAIERILSYWDYRLAADGPYSVSR*
JGIcombinedJ26739_1002833972	3300002245	Forest Soil	MGLFVARVQQGSNIVLEQTCVGDAVWVPKRLEVRASARILFLKSLDIDRILTYSDYKPGADGPYSVSR*
JGIcombinedJ26739_1007236042	3300002245	Forest Soil	EQTCVGDAVWVPKRLEVRASARILFLKSLGIDRILTYSDYKPGADGPYFVSR*
JGIcombinedJ26739_1015726721	3300002245	Forest Soil	RVQRGSHIILEQTRLTDAVWVPKRLEVRASARILLLKSLDLDRILTYSDYHRATDGPYSVSR*
JGI25615J43890_10732982	3300002910	Grasslands Soil	RVQRGSHIILEQTCVGDAVWMPKRLEVRASARILFLKSLNMDRILTYSDYRPATDGPYSVSR*
Ga0058904_13885122	3300004100	Forest Soil	SHIIMEQTCVGESVWVPKRIEIRATARILFLKSLDIQRTLTYTDYRPASDGPYSVSK*
Ga0058891_15455133	3300004104	Forest Soil	GEVTQSFTMGLFVARVERGSHVILEQTCVGDAVWVPKRIEIRATARILFLKSLAIDRILTYSDYRLAADGPYSVSK*
Ga0058891_15467752	3300004104	Forest Soil	QSFSMGLFVARVQRGSHIILEQTRLADAVWVPKRLEVRASARILFLKSLDLDRILTYSDYHRTTDGPYSVSR*
Ga0058901_14901972	3300004120	Forest Soil	QSFSLGLILARVERGSHIILEQTCVGEAVWVPKRIQIRATARILFLKSLVIERVLSYSDYHAATEGTYSVSK*
Ga0062386_1000103107	3300004152	Bog Forest Soil	MGLFVARVQRGSHIIPEETCIGDGIWVPRRLEVRASARIFLVMSLDIDRILAYSDYRPAVDGSYSVSR*
Ga0062595_1005078932	3300004479	Soil	QVTQPFSMGLFVARVQRGSHITLEQTNVGNAVWMPQRLEVRASAKILLLKGLNIERILTYSDYCPEADCPYSVSR*
Ga0058899_101291351	3300004631	Forest Soil	ILARVERGSHIIMEQTCVGESVWVPKRIEIRATARILFLKSLDIQRTLTYTDYRPASDGPYSVSK*
Ga0062591_1000357701	3300004643	Soil	FSMGLFVARVQRGSHVTLEQTNVGNAVWVPQRLEVRASASILFLRSLSIQRIFTYSDYRREGDGSYNKQITA*
Ga0066676_100058141	3300005186	Soil	GSHIILEQTCVGDAIWVPKRLEVRASARIFFVKSLAIERILSYWDYRLAADGPYSVSR*
Ga0070689_1019939401	3300005340	Switchgrass Rhizosphere	LILARVERGSQITIEQACVSEAVWVPKRVEIRATARILFLKSLDIQRTLTYTDYRPASDGPYSASR*
Ga0070703_105842843	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFVARVQRGSRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAA
Ga0070706_1003899351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FSMGLFVARVQRGSHIILEQKNVGGAVWVPQRLEVRASARILFLKSLAIERIFTYWDYRPEADGPYSVSR*
Ga0070706_1006566831	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEGQVTQSFSMGLFVARVQRGSHIILEQKNVGDAVWVPQRLEVRASARILFLKSLAIERIFTYSDYRPEADGPYSVSR*
Ga0070707_1009599261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GQVTQSFSMGLFVARVQRGSHVILEQISMGDAVWVPKRLAVRANAKILFLRSLDIERILTYSDYCPVVDGSYSMNR*
Ga0070707_1016725871	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQRGSHIIMEQTCVGDAVWVPKRLEMRASARILFLKSLDIERILTYSEYFPATDGPYSVSR*
Ga0070732_102921522	3300005542	Surface Soil	VQRGSHIILEQTDVGDAVWVPKHLEVRASARILFLKSLDIDRILTYSDYDRVTGGPYSVAK*
Ga0070732_105599931	3300005542	Surface Soil	MEQTCVGDAVWVPRHLEMRASARILFLKSLDIARILTYSDYRPAADGPYSVSR*
Ga0066699_107960951	3300005561	Soil	VTQSFSMGLFVARVQRGSHIILEQTCVGDAIWVPKRLEVRASARIFFVKSLAIERILSYWDYRLAADGPYSVSR*
Ga0068858_1023259081	3300005842	Switchgrass Rhizosphere	VARVQRGSRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0068860_1000484651	3300005843	Switchgrass Rhizosphere	LFVARVQRGSRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0070716_1003133261	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFVARVQRGSRIVLLQTNVGDAVWVPQRLERRGIARILFLKSLAVERIFTYSDY
Ga0070712_1014255793	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LFVARVQRGSHITLEQKNVGDAVWVPQRLEVRASARILFLKSLAIERIFTYSDYRPEADGPYSVSR*
Ga0070765_1020703491	3300006176	Soil	ARVQRGSHIILEQTRLADAVWVPQRLEVRASARILFLKNLDLDRILTYSDYRRATDGPYTVSR*
Ga0070765_1021796392	3300006176	Soil	MGLFVARVQRGSHVILEQTCVGDAVWVPKRLEVRASARILFVKSLDVDRVLTYSDYLPAADGRYSVSR*
Ga0068871_1020016682	3300006358	Miscanthus Rhizosphere	SRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0079222_123399131	3300006755	Agricultural Soil	VTQSFSMGLFVARVQRGSHIIMEETCVGDAVWVPKRLQMRASARILFLKSLDIARILTYSDYRLAADGPYSVSR*
Ga0075435_1007478621	3300007076	Populus Rhizosphere	IMEQTCVGDAVWVPRHLEMRASARILFLKSLDIARILTYSDYRPAADGPYSVSR*
Ga0099791_102965272	3300007255	Vadose Zone Soil	WIKVDGEVTQPFSMGLFVARVQRGSHIILEQTCVGDAVWMPKRLEVRASARILFLKSLNMDRILTYSDYRPATDGPYSVSR*
Ga0066710_1031190791	3300009012	Grasslands Soil	QVTQSFSMGLFVARVQRGSHIILEQKHVGDAIWVPQRLEVRASARILFLKSLAIERIFTYSDYRTEVDGPYSVSR
Ga0099830_101141173	3300009088	Vadose Zone Soil	ARVQRGSHIILEQTCVGDAVWVPKRLEIRASARILFLKSLNLDRILTYSDYRPTVDGSYSVSR*
Ga0099830_117805461	3300009088	Vadose Zone Soil	ILARVERGSRIILEQTCVGDAVWVPKRIEIRATARILFLKSLDIQRVLTYTDYRPSSDGPYSASK*
Ga0099827_116431222	3300009090	Vadose Zone Soil	ARVQRGSHIIMEQTCVGDAIWVPKRLEMKASARILFLKSLDLERILTYSDYRPAAEGPYSVSR*
Ga0105245_100354741	3300009098	Miscanthus Rhizosphere	GQVTQSFSTGLFVARVQRGSRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0116215_12245691	3300009672	Peatlands Soil	HIIFEQMSIGDAVWVPKRLELRASARILFLKTLAIERILTYSEYRASADSSYSETR*
Ga0134126_121482151	3300010396	Terrestrial Soil	QSFSMGLFVARVQRGSHVILEQIRVGDGVWVPKRIEVRASARILLLKSLDVDRILTYSDYWRAADGPYSVSR*
Ga0150983_111132211	3300011120	Forest Soil	MGLFVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNMDRILTYSDYRPAGDGPYSVSR*
Ga0150983_131383741	3300011120	Forest Soil	ILARVERGSHIIMEQTCVGGAVWVPRRIEIRATARILFLKSLDIQRTLTYTDYRPASDGPYSVSK*
Ga0150983_159474132	3300011120	Forest Soil	SNIVLEQTCVGDAVWVPKRLEVRASARILFLKSLGIDRILTYSDYRPGADGPYFVSR*
Ga0150983_162995622	3300011120	Forest Soil	LEQTCLGDAVWVPKRLEVRASARILFLKSLDLDRILTYSDYRRAGDGPYTVSR*
Ga0137392_108884342	3300011269	Vadose Zone Soil	MGLFIARVQLGSRIMLEQKNVGDAVWVPQRLEVQASARILLLKSLTIERIFTYSDYRPEADGPYSVSR*
Ga0137393_117687522	3300011271	Vadose Zone Soil	ILARVERGSHIIMEQTCVGEAFWVPKRIEIRATARILFLKSLDIQRTLTYTDYRPTSDGPYSASK*
Ga0137389_112859052	3300012096	Vadose Zone Soil	ILARVERGSHIIMEQTCVGEAVWVPKRIEIRATARILFLKSLDIQRTLIYTDYRPASDGPYSASK*
Ga0137388_108174121	3300012189	Vadose Zone Soil	QVTQSFSMGLLVARVQRGSHIILEQTCAGDAVWVPKRLEVRASARILFLKSLDIDRILTYSDYRRAADGPYSVSR*
Ga0137363_104016472	3300012202	Vadose Zone Soil	QVTQSFSMGLFVARVQRGSRIVLDQTNVGDAVWVPQRLEVRGSARILLLKSLTVERIFTYSDYRLEADAPYSVSR*
Ga0137381_110575601	3300012207	Vadose Zone Soil	KVDGEVTQSFSMGLFVARVQRGSHIIMEQTCVGDAVWVPRHLEMRASARILFLKSLDIARILTYSDYRPAADGPYSVSR*
Ga0137377_107676221	3300012211	Vadose Zone Soil	QSFSMGLFVARVQRGSHIILEQKNVGDAVWVPQRLEVRASARILFLKSLAIERIFTYSDYRPEVDGPYSVSR*
Ga0137370_102532992	3300012285	Vadose Zone Soil	SHIILEQKHVGDAIWVPQRLEVRASARILFLKSLAIQRIFTYSDYRPEADGPYSVSR*
Ga0137390_104289492	3300012363	Vadose Zone Soil	MGLFIARVQLGSRIMLEQKNVGDAVWVPQRLEVRASARILLLKSLTIERIFTYSDYRPEADGPYSVSR*
Ga0137358_102705053	3300012582	Vadose Zone Soil	WVRVDGEVTQSFSIGLLVARVQRGSHIIMEQTCVGDAVWVPKRLEMKASARILFLKSLDLERILTYSDYRPAAGGPYSVSR*
Ga0137358_105721812	3300012582	Vadose Zone Soil	SMGLFVARVQRGSHIILEQTCVGDGVWVPKRLEVRASARILFLKNLDMDRILTYSDYRPAADGAYSVSK*
Ga0137396_102256531	3300012918	Vadose Zone Soil	QSFSIGFLVARVQRGSHIIMEQTSVGDAVCVRKRFEMKLFLKSLDLERILTYSDYRPAANGPYSPSR*
Ga0137396_112665102	3300012918	Vadose Zone Soil	MEQGCAGDSVWVPKRLEMKASVRILFLESLDLERLPTYSDYRPAADGPYSVSR*
Ga0164303_112094111	3300012957	Soil	VEGQVTQSFSMGLFVARVQRGSRVVLEQISVGDAVWVPKRLEVRASAKILFLKSLDIERIFTYSDYRPAVDGVSSVSR*
Ga0164301_103268882	3300012960	Soil	SRIRLEQTCLGDALWVPKRIEMRANARILLLKSLDLYRILTYSDYHPAADGTYSVKK*
Ga0157378_100420301	3300013297	Miscanthus Rhizosphere	GLFVARVQRGSRGILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0182024_100571381	3300014501	Permafrost	HIILEQMSVGDAVWVPKHVEVRASARILFLKSLDMDRILNYSDYLATADSAYSVNR*
Ga0157379_100374976	3300014968	Switchgrass Rhizosphere	ILEQTCVDDGVCLPKRIAVRASARVLFVKSLDIERILSYSDYWLAADGPYAVAR*
Ga0137420_11691712	3300015054	Vadose Zone Soil	TQSFSMGLFVARVQRGSHIILEQTCVGDGVWVPKRLEVRASARILFLKNLDMDRILTYSDYRPAADGAYSVSK*
Ga0137420_12153051	3300015054	Vadose Zone Soil	PFSMGLGLFVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNMDRILTYFDYRPAADGPYSVSR*
Ga0137420_12377132	3300015054	Vadose Zone Soil	QRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNMDRILTYFDYRPAADGPYSVSR
Ga0187818_104877751	3300017823	Freshwater Sediment	FVARVQRGSHIILDETCVGDGVWVPRRLEVRASARIFLVKSLDIDRVLTYSDYRPAADSTYSVSR
Ga0187801_100550942	3300017933	Freshwater Sediment	VQRGSHMILEQMNVGDAVWVPRHLEVRANARILFLKSLAVERILTYSDYRPVADSPYSVS
Ga0187817_104965142	3300017955	Freshwater Sediment	GQVTQSFSVGLFVARVQRGAHIILEQISVGDAVWVPKRLEVRASAKIFFLKSLDMERILTYSDYYPAADGLYSVSR
Ga0187872_100548311	3300018017	Peatland	VARVQRGSHVIVEETRVGDATWVPQRIEIRASARILFVKNLDVDKILTYFDYLIVPDEPYTASR
Ga0187862_107503522	3300018040	Peatland	FVARVQSGSHMILEQTCVGDAAWVPKRLEVRASARILFLKSLDMDKILTYSDYRPAADGPYSVSR
Ga0066667_118756371	3300018433	Grasslands Soil	VDGEVTQSFSMGLFVAYVQRGSHIILEQTCVGDSVWVPKRLQMRFSAKILLLKSLNIDRILTYSDYRPEADSPSSVCR
Ga0210407_100857181	3300020579	Soil	VDGEVTQSFTMGLFVARVERGSHVILEQTCVGDAVWVPKRIEIRATARILFLKSLGIDRILTYSDYRLATDGPYSVSK
Ga0210407_101164921	3300020579	Soil	LFVARVQRGSRIVLEQTNIGDAVWLPHRLELRGSARILFLKSLAVERIFTYSDYRLEADGPYSVSR
Ga0210407_101977732	3300020579	Soil	RGSHIVLEQIRLSDTVWVPKRLEVRASARILFLKSLDLDRILTYSDYHRATDGPYSVSR
Ga0210407_114465491	3300020579	Soil	RVDGQVTESFSMGLFVARVQQGSHIILEQTCVGDAVWVPKRLEIRASARILFLKSLDIDRILTYSDYRPGSDGLYSVSR
Ga0210403_105561561	3300020580	Soil	SLALVVARVQRGSRIVLEQTNVGDAVWVPQRLEVRGSARILFLNSLTVDRIFTYSDYRLEADGPYSVSR
Ga0210399_111758051	3300020581	Soil	ERGSHIILEQTSVGDAVWVPKRIEIRATARILFLKNLDIDRTLTYSDYRLAADGPYSVSK
Ga0210401_100804964	3300020583	Soil	GSHVILEQTCVGDAVWVPKRIEIRATARILFLKSLGIDRILTYSDYRLAADGPYSVSK
Ga0210401_106542261	3300020583	Soil	KVDGEVTQAFSMGLFVARVQRGSHIILEQTSLGDAVWVPKRLEVRASARILFLKSLELDRILTYSDYHAAADGPYSVKK
Ga0215015_108103172	3300021046	Soil	VGSEMCIRDRFVARVERGSHMILEQTNVGDGVWVPKRIEMRASARILFLKSLDIDRILTYSDYRLAADGSYSVSR
Ga0215015_109561041	3300021046	Soil	MGLFVARVQRGSHIVLEQTCVGDGVWVPKRLELRASARILFLKSLDIDRILTYSDYRPAADSSYSVSR
Ga0215015_109949362	3300021046	Soil	IKVDGEVTQSFSMGLFVARVQRGSHVIMEQTCVGDDVWVPKRLEMRASAKILFLKSLDIDRILTYSEYRAATDGSYSVSR
Ga0210406_100046861	3300021168	Soil	MGLFVARVQRGSRIVLEQTNLGDAVWVPQRLEARGSARILFLKSLTVERIFTYSDYRLEADGPYSVTR
Ga0210406_108608362	3300021168	Soil	SHIILEETCVGDAVWVPKRLEMRASAKILFLKSLDIARILTYSDYRPATEGAYSVSR
Ga0210405_104563641	3300021171	Soil	QSFSLGLFVARVERGSHMILEQTNVGDGVWVPKRIEMRASARILFLKSLDLDRILTYSDYRLATDGSYSVSR
Ga0210405_112615471	3300021171	Soil	WSKADGEITQSFSMGLFVARVLRGSHILMEQSRVADSVWVVRRVEMRASAKILFVKSLDVQRILTYSDYRPAADGPYSVSK
Ga0210408_115123621	3300021178	Soil	GSHIILEQTCVGDAVWVPKRLEMRASAKILFLKSLDIARVLTYSDYRQATDGSYSVSR
Ga0210388_102933551	3300021181	Soil	EAEVTQAFSMGLFVARVQRGSRILLSQTCLGGAVWVPERLEVRASAKILFLKSLELDRILTYSDYRAAAVGPYSVKK
Ga0210394_104061201	3300021420	Soil	EQTRLADAVWVPKRLEVRASARILFLKSLDLDRILTYSDYRRATDGPYSVSR
Ga0210384_106924121	3300021432	Soil	IFEETCVGDAVWVPKRLEVRASVRILLLRSLDLDRILTYSDYRPATDGPYLVRR
Ga0210384_112709151	3300021432	Soil	RIGEAVWVPKRIEIRATARILFLKSLGIERVLTYSDYRETPEGAYSVSK
Ga0210390_101494173	3300021474	Soil	AFSMGLFVARVQRGSHIILEQTSLGDAVWVPKRLEVRASARILFLKSLELDRILTYSDYHAAADGPYSVKK
Ga0210410_101747971	3300021479	Soil	VQRGSHIVLEQTRLADAVWVPKRLEVKASARILFLKSLDLDRILTYSDYRRAKDGPYSVS
Ga0210410_109816332	3300021479	Soil	HIIMEQTCVGDAVWVPKRLEMRASATILLLKSLDLERILTYSDYRPSADGLYSVSK
Ga0210409_103095781	3300021559	Soil	MGLFVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNMDRILTYSDYRPAGDGPYSVSR
Ga0210409_117214592	3300021559	Soil	IKVDGEVTQSFTMGLFVARVERGSHVILEQTCVGDAVWVPKRIEIRATARILFLKSLAIDRILTYSDYRLAADGPYSVSK
Ga0247667_10594742	3300024290	Soil	KVDGQVTQAFSMGLILARVERGSRIIMDQTSLGEGVWVPKRIEIRATARIFLLKSLDIQRVLTYSEYRPASDGPYSASK
Ga0137417_14776901	3300024330	Vadose Zone Soil	VARVQRGSHIIMEQTCVGDAVWVPKRLEMKASARILFLKSLDLERILTYSDYRPAADGPYSVSR
Ga0208456_10207182	3300025441	Peatland	LFVARVLRGSHIILEQTCVGDAVWMPKRVEVRASARILFLKTLDMDRILTYSDYRPAADGPYSVSR
Ga0207685_105685832	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TQSFSMGLILARVERGSHIIMEQTCIGEAVWVPKRIEIRATARILFLKSLDIQRTLTYTDYRRAADAPYTASK
Ga0207699_103026911	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	IVLEQTNVGDAIWVPQRLEARGSARILFLKSLAVERIFTYSDYRPEGDSPYFVSR
Ga0207684_117177042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QSFSMGLFVARVQRGSRIVLEQTNVGDAVWVPQRLEVRGSARILFLKSLTVERIFTYSDYRLEADAPYSVSR
Ga0207693_103678391	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ILARVERGSHITIEQTCVSEAVWVPKRVEIRAMARILFLKGLDIQRTLSYTDYRTATDLLETQQGF
Ga0207693_111464762	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ILARVERGSHITIEQTCVSEAVWVPKRVEIRATARILFLKSLDIQRTLTYTDYRPASDGPYSASR
Ga0207693_112969071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VARVQRGSHIILEQKHVGDAIWVPQRLEVRASARILFLKSLAIERIFTYSDYRPEVDGPYSVSR
Ga0207646_104463871	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VEGQVTQPFSMGLFVARVQRGSRIVLEQTNVGDAVWVPQRLEVRGSARILFLKSLTVERIFTYSDYRLEVDGPYSVSR
Ga0207665_105005061	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	WIKVEGQVTQSFSMGLFVARVQRGSHIILEQKNVGGAVWVPQRLEVRASARILFLKSLAIERIFTYSDYRPEVDGPYSVSR
Ga0257176_10302721	3300026361	Soil	FSMGLFVARVQRGSHIILEQTCVGDGVWVPKRLEVRASARILFLKSLNMDRILTYFDYRPAADGPYSVSR
Ga0257167_10586742	3300026376	Soil	SHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNMDRILTYFDYRPAADGPYSVSR
Ga0179587_111113602	3300026557	Vadose Zone Soil	RGSHIIMEQTSVGDGVWVPKRIEIRATARILFLRSLGIDRILTYSDYRPAADGPYSVSR
Ga0209214_10533901	3300027071	Forest Soil	QVTESFSMGLFVARVQHGWHMILEQTSVGDAVWVPRRLELRASAKIFFLKSLDIERIFTYSDYLSATDGPYSVSK
Ga0209003_10921771	3300027576	Forest Soil	CIKVEGQVTQSFSMGLFVARVQRGSRIVLEQTNLGDAVWVPQRLEVRGSARILFLKSLTAERIFTYSDYRLEVDGPYSVTR
Ga0209011_10013911	3300027678	Forest Soil	FVARVQRGSHIILEQTCVGDAVWVPKRLEVRASARILFLKSLNIDRILTYSDYRPGADGPYSVSR
Ga0209248_102460132	3300027729	Bog Forest Soil	VKVDGEVTQSFSMGLFVARVQRGSHILLDQICLGDAVWVPKRLEVRASARILFLKSLELDRVLTYSDYHASADGPYSVKK
Ga0209580_104517282	3300027842	Surface Soil	IVLEQVCVGDGVWVPKRIEVQASARILFLKSLDVVRILTYSDYRLVVQGPYSVSR
Ga0209274_102128851	3300027853	Soil	FVARVQRGSHIILEQTAVGDGVWVPKRLEVRASARILFVKSLDIDRILMYSDYRPAPDDRYSASR
Ga0209526_100303142	3300028047	Forest Soil	MGLFVARVQQGSNIVLEQTCVGDAVWVPKRLEVRASARILFLKSLDIDRILTYSDYKPGADGPYFVSR
Ga0209526_106135661	3300028047	Forest Soil	VARVQRGSHILLEQTCVGDAVWVPKRLEVRASARILFLKSLDLDRILTYSDYRPAADGPYSVSR
Ga0209526_107598471	3300028047	Forest Soil	MKVDGQVTQSFSMGLFVARVERGSHIILEQTCVGNAVWVPKLIEVRASARILFLKSLDIDRILSYSDYLLSTDSPYSVSR
Ga0137415_100156199	3300028536	Vadose Zone Soil	RVLRGSHIILEQTCVGDAVWVPKRLEMRASAKILFLKSLDIARILTYSDYRPATDGSYSVSG
Ga0308309_114028021	3300028906	Soil	ARVQRGSHIVLEQTRLTEAVWVPQRLEVRASARILFLKSLDLDRILTYSDYRRATDGPYSVSR
Ga0316363_100420401	3300030659	Peatlands Soil	GSHIIFEQMSIGDAVWVPKRLELRASARILFLKTLAIERILTYSEYRASADSSYSETR
Ga0170834_1025032472	3300031057	Forest Soil	LFVARVQRGSRILLVQTCLGDAVWVPERLEVRASARILFLKSLELDRILTYSDYRAAAVGPYSVKK
Ga0170823_149540502	3300031128	Forest Soil	SRILLVQTCLGDAVWVPERLEVRASARILFLKSLELDRILTYSDYRAAAVGPYSVKK
Ga0170823_169214691	3300031128	Forest Soil	IKVDVDATESFSIALILARVERGSHITIEQTSVGEAVWVPKRVEIRATARILFLKSLDIQRTLSYTDYRPASDGPYSASR
Ga0310686_1028201431	3300031708	Soil	QVTQAFSMGLFVARVERGTHITLEETCVSNDVWVPKRIEARASARILFIKSLDIDRILTYSNYDRLTDGPYAAGK
Ga0310686_1057882321	3300031708	Soil	EGEITEPFSMGLFIARVQSGSRVDLEQTCVGNGVWVPKRLEVRGTATIFFFKTLGIDRILTYSDYFRAADGAYSVSR
Ga0307474_1000485013	3300031718	Hardwood Forest Soil	RVQQGSHIVLEQTNVGDAVWVPQRLEVRGSARILFLKNLAIERILTYSDYRPEVDGPYSVSR
Ga0307469_117498081	3300031720	Hardwood Forest Soil	QRGSHIIMEQTCVGDAVWVPKRLEMKASARILFLKSLDLERILTYTDYRPAADGPYSVSR
Ga0307468_1000771922	3300031740	Hardwood Forest Soil	IIMEQESVGDAVWVPKRLEMRASARILFLKSLDIERIFTYSDYRPAVDGVSSVSR
Ga0307475_106070501	3300031754	Hardwood Forest Soil	SMGLFVARVQQGSNIVLEQTCVGDAVWVPKRLEVRASARILFLKSLDIDRILTYSDYRPGADGLYSVSR
Ga0307478_100757751	3300031823	Hardwood Forest Soil	IVLEQTCVGDAVWVPKRLEMRASTRILFLKSLDIERILTYSDYRPAVDGPYSVSR
Ga0307479_104022942	3300031962	Hardwood Forest Soil	RGSHVILEQKNVGAAVWLPQRLEVRASARIFLLKSLAIERIFTYSDYRPEADGPYSVSR
Ga0307471_1026262991	3300032180	Hardwood Forest Soil	RGSHIIMEQTCVGDAVWVPKRVEMKASAKILFLKSLDLERILTYSDYRPGASGPYSVSR
Ga0307471_1027132861	3300032180	Hardwood Forest Soil	MGLLVAHMQRGSHIILEQACVGDSVWVPKRLQIRFSAKILLLKSLNIDRIFTYSDYRPEADSPSSVCR
Ga0307472_1009272542	3300032205	Hardwood Forest Soil	RVERGSHITMEQTCVGEAVWVPKQVEIRATARILFLKSLDIQRTLTYTDYRPASDPPETRPAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052816

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences