Metagenome Family F052907

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052907
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	91 residues
Representative Sequence	FARVLMIFLVGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR
Number of Associated Samples	85
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.14 %
% of genes near scaffold ends (potentially truncated)	72.54 %
% of genes from short scaffolds (< 2000 bps)	83.80 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.085 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (59.155 % of family members)
Environment Ontology (ENVO)	Unclassified (52.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.859 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.22% β-sheet: 0.00% Coil/Unstructured: 53.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF13432	TPR_16	4.23
PF13414	TPR_11	3.52
PF03401	TctC	2.11
PF00072	Response_reg	2.11
PF12071	DUF3551	2.11
PF03992	ABM	2.11
PF00239	Resolvase	1.41
PF10926	DUF2800	0.70
PF06314	ADC	0.70
PF14319	Zn_Tnp_IS91	0.70
PF02801	Ketoacyl-synt_C	0.70
PF06445	GyrI-like	0.70
PF04226	Transgly_assoc	0.70
PF15738	YafQ_toxin	0.70
PF02566	OsmC	0.70
PF01609	DDE_Tnp_1	0.70
PF02586	SRAP	0.70
PF02661	Fic	0.70
PF00589	Phage_integrase	0.70
PF00313	CSD	0.70
PF13673	Acetyltransf_10	0.70
PF01391	Collagen	0.70
PF14247	DUF4344	0.70
PF09954	DUF2188	0.70
PF13453	zf-TFIIB	0.70
PF00515	TPR_1	0.70
PF01230	HIT	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.11
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.41
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.41
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.70
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.70
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.70
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.70
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.70
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.70
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.70
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.70
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
All Organisms	root	All Organisms	35.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
cellular organisms	root	All Organisms → cellular organisms	35.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.97 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.63 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.52 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.11 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.70 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.70 %
Blastochloridaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.82 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.41 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.70 %
Blastochloris	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris	0.70 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.70 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.70 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.70 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.70 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.70 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.70 %
Blastochloris sulfoviridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	0.70 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.63 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	0.70 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.70 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.70 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.70 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.70 %
Blastochloris sulfoviridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.08 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.63 %
Opitutus sp. GAS368	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	0.70 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	0.70 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.70 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.70 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.70 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.70 %
Blastochloris sulfoviridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000907\|JGI11871J12876_100647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1120	Open in IMG/M
3300002907\|JGI25613J43889_10063462	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300002917\|JGI25616J43925_10052067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1769	Open in IMG/M
3300002917\|JGI25616J43925_10242815	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300005332\|Ga0066388_100729037	Not Available	1594	Open in IMG/M
3300005332\|Ga0066388_102363081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300005332\|Ga0066388_103422019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	810	Open in IMG/M
3300005764\|Ga0066903_105142555	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005764\|Ga0066903_107867606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	548	Open in IMG/M
3300006163\|Ga0070715_10303120	Not Available	855	Open in IMG/M
3300007255\|Ga0099791_10016678	All Organisms → cellular organisms → Bacteria → Proteobacteria	3128	Open in IMG/M
3300007255\|Ga0099791_10342405	Not Available	716	Open in IMG/M
3300007258\|Ga0099793_10020215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2725	Open in IMG/M
3300007265\|Ga0099794_10581066	Not Available	593	Open in IMG/M
3300007788\|Ga0099795_10132207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1008	Open in IMG/M
3300007788\|Ga0099795_10196837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300009038\|Ga0099829_10183307	Not Available	1686	Open in IMG/M
3300009038\|Ga0099829_10188079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1665	Open in IMG/M
3300009038\|Ga0099829_10454361	Not Available	1062	Open in IMG/M
3300009038\|Ga0099829_11028703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	683	Open in IMG/M
3300009038\|Ga0099829_11195265	Not Available	630	Open in IMG/M
3300009038\|Ga0099829_11434767	Not Available	570	Open in IMG/M
3300009088\|Ga0099830_10009164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5958	Open in IMG/M
3300009088\|Ga0099830_10149329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1796	Open in IMG/M
3300009089\|Ga0099828_10638900	Not Available	957	Open in IMG/M
3300009090\|Ga0099827_10642436	Not Available	916	Open in IMG/M
3300009143\|Ga0099792_10271933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	995	Open in IMG/M
3300009143\|Ga0099792_11133034	Not Available	528	Open in IMG/M
3300009792\|Ga0126374_10141931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300009792\|Ga0126374_10291817	Not Available	1088	Open in IMG/M
3300009792\|Ga0126374_10339369	Not Available	1025	Open in IMG/M
3300009792\|Ga0126374_11606911	Not Available	537	Open in IMG/M
3300010046\|Ga0126384_10266796	Not Available	1392	Open in IMG/M
3300010046\|Ga0126384_11444801	Not Available	643	Open in IMG/M
3300010159\|Ga0099796_10150182	Not Available	917	Open in IMG/M
3300010358\|Ga0126370_10739151	Not Available	869	Open in IMG/M
3300010358\|Ga0126370_11880710	Not Available	581	Open in IMG/M
3300010358\|Ga0126370_11960835	Not Available	571	Open in IMG/M
3300010359\|Ga0126376_10514602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1111	Open in IMG/M
3300010360\|Ga0126372_10431184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1214	Open in IMG/M
3300010360\|Ga0126372_11067264	Not Available	824	Open in IMG/M
3300010360\|Ga0126372_11209196	Not Available	780	Open in IMG/M
3300010360\|Ga0126372_11903213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	640	Open in IMG/M
3300010360\|Ga0126372_12715807	Not Available	547	Open in IMG/M
3300010362\|Ga0126377_10723137	All Organisms → cellular organisms → Bacteria → Proteobacteria	1050	Open in IMG/M
3300010362\|Ga0126377_13083637	Not Available	538	Open in IMG/M
3300010376\|Ga0126381_100260831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2354	Open in IMG/M
3300011269\|Ga0137392_10001446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13603	Open in IMG/M
3300011269\|Ga0137392_10014032	Not Available	5425	Open in IMG/M
3300011269\|Ga0137392_10165149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1795	Open in IMG/M
3300011269\|Ga0137392_11073754	Not Available	660	Open in IMG/M
3300011269\|Ga0137392_11453544	Not Available	544	Open in IMG/M
3300011270\|Ga0137391_10277636	Not Available	1448	Open in IMG/M
3300011270\|Ga0137391_10429980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300011271\|Ga0137393_10064045	Not Available	2912	Open in IMG/M
3300012189\|Ga0137388_10674672	Not Available	960	Open in IMG/M
3300012189\|Ga0137388_11385158	Not Available	642	Open in IMG/M
3300012189\|Ga0137388_11586961	Not Available	590	Open in IMG/M
3300012189\|Ga0137388_11785856	Not Available	547	Open in IMG/M
3300012202\|Ga0137363_10042584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3207	Open in IMG/M
3300012203\|Ga0137399_11452724	Not Available	572	Open in IMG/M
3300012205\|Ga0137362_10007917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	7547	Open in IMG/M
3300012211\|Ga0137377_10862610	Not Available	838	Open in IMG/M
3300012211\|Ga0137377_10961274	Not Available	785	Open in IMG/M
3300012361\|Ga0137360_10721028	Not Available	857	Open in IMG/M
3300012361\|Ga0137360_10872108	Not Available	775	Open in IMG/M
3300012362\|Ga0137361_10012573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6129	Open in IMG/M
3300012362\|Ga0137361_10164806	Not Available	1990	Open in IMG/M
3300012363\|Ga0137390_10010529	Not Available	8158	Open in IMG/M
3300012582\|Ga0137358_10290604	Not Available	1110	Open in IMG/M
3300012683\|Ga0137398_10058188	Not Available	2317	Open in IMG/M
3300012683\|Ga0137398_10359525	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300012683\|Ga0137398_10467568	Not Available	864	Open in IMG/M
3300012683\|Ga0137398_11202064	Not Available	518	Open in IMG/M
3300012917\|Ga0137395_10163455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1531	Open in IMG/M
3300012917\|Ga0137395_10360529	Not Available	1037	Open in IMG/M
3300012917\|Ga0137395_10670830	Not Available	750	Open in IMG/M
3300012918\|Ga0137396_10512056	Not Available	889	Open in IMG/M
3300012923\|Ga0137359_10127165	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300012923\|Ga0137359_10647360	Not Available	924	Open in IMG/M
3300012923\|Ga0137359_10800469	Not Available	817	Open in IMG/M
3300012925\|Ga0137419_11378428	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012927\|Ga0137416_10408242	Not Available	1152	Open in IMG/M
3300012927\|Ga0137416_10712993	Not Available	882	Open in IMG/M
3300012927\|Ga0137416_11725300	Not Available	571	Open in IMG/M
3300012927\|Ga0137416_11835377	Not Available	554	Open in IMG/M
3300012929\|Ga0137404_10470953	Not Available	1117	Open in IMG/M
3300012944\|Ga0137410_10235781	Not Available	1429	Open in IMG/M
3300012944\|Ga0137410_10721480	Not Available	832	Open in IMG/M
3300012944\|Ga0137410_11276651	Not Available	634	Open in IMG/M
3300012948\|Ga0126375_11597264	Not Available	561	Open in IMG/M
3300012971\|Ga0126369_11395861	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300015241\|Ga0137418_10030534	Not Available	4992	Open in IMG/M
3300015241\|Ga0137418_10116114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2391	Open in IMG/M
3300015241\|Ga0137418_10347248	Not Available	1226	Open in IMG/M
3300015241\|Ga0137418_10355392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	1208	Open in IMG/M
3300015242\|Ga0137412_10156846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1833	Open in IMG/M
3300015245\|Ga0137409_10089898	All Organisms → cellular organisms → Bacteria	2858	Open in IMG/M
3300016404\|Ga0182037_10980811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300016422\|Ga0182039_11413736	Not Available	632	Open in IMG/M
3300018468\|Ga0066662_11317437	Not Available	741	Open in IMG/M
3300020170\|Ga0179594_10216194	Not Available	720	Open in IMG/M
3300021086\|Ga0179596_10171496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300021560\|Ga0126371_13164705	Not Available	557	Open in IMG/M
3300024330\|Ga0137417_1486210	All Organisms → cellular organisms → Bacteria	4023	Open in IMG/M
3300026285\|Ga0209438_1152915	Not Available	607	Open in IMG/M
3300026320\|Ga0209131_1021120	All Organisms → cellular organisms → Bacteria	3904	Open in IMG/M
3300026351\|Ga0257170_1008378	Not Available	1255	Open in IMG/M
3300026351\|Ga0257170_1042396	Not Available	626	Open in IMG/M
3300026356\|Ga0257150_1011041	Not Available	1227	Open in IMG/M
3300026359\|Ga0257163_1036641	Not Available	775	Open in IMG/M
3300026360\|Ga0257173_1062689	Not Available	540	Open in IMG/M
3300026361\|Ga0257176_1060008	Not Available	607	Open in IMG/M
3300026376\|Ga0257167_1078971	Not Available	519	Open in IMG/M
3300026377\|Ga0257171_1047162	Not Available	745	Open in IMG/M
3300026482\|Ga0257172_1031884	Not Available	951	Open in IMG/M
3300026489\|Ga0257160_1072422	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300026490\|Ga0257153_1024087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1252	Open in IMG/M
3300026514\|Ga0257168_1065396	Not Available	802	Open in IMG/M
3300026515\|Ga0257158_1089707	Not Available	600	Open in IMG/M
3300026557\|Ga0179587_10219097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210	Open in IMG/M
3300026557\|Ga0179587_10325717	Not Available	993	Open in IMG/M
3300026557\|Ga0179587_10569307	Not Available	745	Open in IMG/M
3300027512\|Ga0209179_1013368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1490	Open in IMG/M
3300027512\|Ga0209179_1020418	Not Available	1285	Open in IMG/M
3300027616\|Ga0209106_1029558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300027655\|Ga0209388_1153781	Not Available	649	Open in IMG/M
3300027671\|Ga0209588_1087257	Not Available	1006	Open in IMG/M
3300027846\|Ga0209180_10111656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	1563	Open in IMG/M
3300027846\|Ga0209180_10607411	Not Available	604	Open in IMG/M
3300027869\|Ga0209579_10409015	Not Available	735	Open in IMG/M
3300027874\|Ga0209465_10453917	Not Available	641	Open in IMG/M
3300027875\|Ga0209283_10968287	Not Available	509	Open in IMG/M
3300027903\|Ga0209488_10073443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2537	Open in IMG/M
3300028536\|Ga0137415_10035023	Not Available	4929	Open in IMG/M
3300031679\|Ga0318561_10647725	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300031740\|Ga0307468_100106063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1686	Open in IMG/M
3300031910\|Ga0306923_10693506	Not Available	1134	Open in IMG/M
3300032076\|Ga0306924_10747827	Not Available	1094	Open in IMG/M
3300032783\|Ga0335079_10143824	Not Available	2679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.96%
Loam	Environmental → Terrestrial → Soil → Loam	6.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	74.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	59.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000907	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11871J12876_1006473	3300000907	Forest Soil	YGGAVRQAIAGWSPHLTWLAPAGAPGGTSADRFKAMSLALATARQSLDKLGTEISKAQAQDGDGPPRRKR*
JGI25613J43889_100634621	3300002907	Grasslands Soil	LITRVRLWLGKLVSFAFVRVLVIFVVGFAAGFAWQSYGSAARKAIAGWSPHLGWLAPAGAAAGTSPDRLKATTFALATARQSLDKLAAEISKLQAQDADPPRRRATR*
JGI25616J43925_100520672	3300002917	Grasslands Soil	LSLGKLVSFAFVRVLVIFVVGFAAGFAWQSYGGAAXXAIAGWSSHLGWLAPAGAAAGTSPDRLKATTLALATARQSLDRLATEISKLQAQDADPPRRRATR*
JGI25616J43925_102428152	3300002917	Grasslands Soil	CRRRQSYSGAARKAMASWSPHLGWLAPAAVPGGASPERLKATTLALAAARQSLDKLANEISKLEAQGGDVPRRRAAR*
Ga0066388_1007290372	3300005332	Tropical Forest Soil	MNLIVRARLWLGKLASFAFARVFMIFVIGFAVGVAWQSYGGEARKTIASWSPHLSWLAPPAASASSERIRAISLALATARQNIDKVASEINRLPPQDGDAARRRTSR*
Ga0066388_1023630812	3300005332	Tropical Forest Soil	VIFVVGFAAGFAWQSYGGGVKKAIAGWSPRLEWLAPAAPAGTSSSERLKATTLALATARQSLDKLATEISKLQAQDVVEPPRRRATR*
Ga0066388_1034220192	3300005332	Tropical Forest Soil	GKLVSFAFARVLMILFIGFAAGVAWQSYGSAARKAMASWSPRLGWLAPTAPAGTSAERLKATSLALAAVRQSVDKLTAEIGTLQAERGDQPRRRSTR*
Ga0066903_1051425552	3300005764	Tropical Forest Soil	MNLIVRARLWLGKLASFAFARVLMIFVIGFVVGVAWQSYGGEARKTIASWSPHLSWLAPSAASASSERIRAISLALATARQNIDKVANEINRLPPQDGDAPRRRTNR*
Ga0066903_1078676061	3300005764	Tropical Forest Soil	GVAWQSYGGEARKTIASWSPHLGWLAPPSASASSERIKAISLALATARQNIDKVASEINRLPAQDGDAARRRTNR*
Ga0070715_103031203	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LTAVRLWLGKSVSSAAARVLMIFFVGFVAGIAWQSYGGAARQAIAGWSPRLTWLAPAGAPGGTSADRFKAMSLALATARQSLDKLGTEISKAQDGDGPPRRKR*
Ga0099791_100166785	3300007255	Vadose Zone Soil	LITRIRLWLGKLFSLAFVRVVMIFLLGFAAAIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR*
Ga0099791_103424053	3300007255	Vadose Zone Soil	IRLWLGKLFSFAFARVLMIFLVGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR*
Ga0099793_100202151	3300007258	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0099794_105810661	3300007265	Vadose Zone Soil	IGVRPRSVDFSPWFCAGIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR*
Ga0099795_101322071	3300007788	Vadose Zone Soil	GGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0099795_101968371	3300007788	Vadose Zone Soil	RLWLGKLISFAFVRVLVIFVVGFAAGFAWQSYGSAARKAIAGWSPHLGWLAPAGAAAGTSPDRLKATTFALATARQSLDKLAAEISKLQAQDADPPRRRATR*
Ga0099829_101833071	3300009038	Vadose Zone Soil	NFSRSRPTTKPHGAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0099829_101880793	3300009038	Vadose Zone Soil	MIFFIGFAAGLAWQSYGGAARLTIAGWSPRLSRLAPAAVPTGTSPERLKAMSLALAAARQSLDKLATEISKLQAQDNSDRRPGSRRASRRL*
Ga0099829_104543612	3300009038	Vadose Zone Soil	LGLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAP
Ga0099829_110287031	3300009038	Vadose Zone Soil	AGIAWQSYGGAARKAIASWSPHLTWLAPAAMPAGTSPERHKAMSLALATARQSLDKLATEISKLPAQDVDAPRRRATR*
Ga0099829_111952651	3300009038	Vadose Zone Soil	VHQRHKQSLGKLFSLAFVRVLMIFLLGFAASIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGSSAERFKAVSLALASARQSLDKLSTEISKLPAQDGDAPRRRATR*
Ga0099829_114347672	3300009038	Vadose Zone Soil	LMILIVGFAAGVAWQSYGGAARKAIASWSPHLGWLAPAAVPGGTSPERLKATTLALAAARQSIDKLANEISKLEAQGGDVPRRRAGR*
Ga0099830_100091646	3300009088	Vadose Zone Soil	LWLGKLFSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0099830_101493292	3300009088	Vadose Zone Soil	MIFFIGFAAGLAWQSYGGAARLTIAGWSPRLSRLAPAAVPTGTSPERLKAMSLALATARQSLDKLATEISKVQAQDRDAPRRRATR*
Ga0099828_106389003	3300009089	Vadose Zone Soil	LGLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0099827_106424361	3300009090	Vadose Zone Soil	LWLGKLFSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLTPPTVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0099792_102719331	3300009143	Vadose Zone Soil	AGAAWQSYGGAARKVIAGWSPHLAWLAPAATPGGTSPERLKATTLALAVVRQSVDKLSTEISKLQAQGGDAPRRKATR*
Ga0099792_111330341	3300009143	Vadose Zone Soil	LWLSKLVSFAFARVLMIFLVGFAAGIAWQSYGDAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0126374_101419312	3300009792	Tropical Forest Soil	MIFFIGFACGLAWQSYGDAARKAVASWSPHLGWLAPAGAASGTSPARLKAMSLALATARQSLDKLATEIGKLPAQDGDAPRRRATR*
Ga0126374_102918172	3300009792	Tropical Forest Soil	VIAKALGKLFSFAVARVLLIFFIGFAAGLAWQSYGGAARKAIGGWSPRLGWLVPATTPAGASAERLKAMSLALAAARQDLDKLAAEIRRVQAQSTPERRPGPRRASQRL*
Ga0126374_103393692	3300009792	Tropical Forest Soil	MNLIVRARLWLGKLASFAFARVLMIFVIGFVVGVAWPSYGGEARKTIASWSPHLSWLAPSAASASSERIRAISLALATARQNIDKVASEINRLPAQDGDAARRRTNR*
Ga0126374_116069111	3300009792	Tropical Forest Soil	WLWLGKLVSFRLARVLVIFVVGFAAGFAWQSYGGGVKKAIAGWSPRLEWLAPAAPAGTSSSERLKATTLALATARQSLDKLATEISKLQAQDVVEPPRRRATR*
Ga0126384_102667961	3300010046	Tropical Forest Soil	VRKAIAGWSPHLAWLAPAGAPGGTSPDRFKAMSLALATARQSLDKLGTEISKAQAQNGDAPPRRRR*
Ga0126384_114448011	3300010046	Tropical Forest Soil	MNLIVRARLWLGKLASFAFARVFMIFVIGFAVGVAWQSYGGAARNAIASWSPHLSWLAPPAASVSSERIRAITLALATARQNLDKVANEVSRLPAQD
Ga0099796_101501821	3300010159	Vadose Zone Soil	IRLWLGKLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPVPSGGSTERLKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0126370_107391512	3300010358	Tropical Forest Soil	LLPRKLVSSAFARVLMIFVVGFAAGMAWQSHGDAIRKTIAGWSPRLAWMTPGPASAGTSAERLKATSVALAGVRQSVDRLATELDRLQAQGVPDQPSGSRRASQRR*
Ga0126370_118807101	3300010358	Tropical Forest Soil	MNLIVRARLWLGKLASFAFARVFMIFVIGFAVGVAWQSYGGEARKTIASWSPHLSWLAPSAASASSERIRAISLALATARQNIDKVASEINRLPPQDGDAARRRTSR*
Ga0126370_119608351	3300010358	Tropical Forest Soil	MIFVIGFAAGIAWQSYGGAARKAIAGWSPRLSWLAPAGGGASAERIKAMSLAVSTARQSLDKLSNEISRLEAQADVPRRRATR*
Ga0126376_105146021	3300010359	Tropical Forest Soil	VGFAAGFAWQSYGSGARKAIAGWSPRLEWLAPAVPAGTSSERLKATTLALATARQSLDKLATEISKLQAQDVVEPPRRRATR*
Ga0126372_104311842	3300010360	Tropical Forest Soil	LGKLVSFRFARVLVIFVVGFAAGFAWQSYGSGARKAIAGWSPRLEWLAPAVPAGTSSERLKATTLALATARQSLDKLATEISKLQAQDVVEPPRRRATR*
Ga0126372_110672641	3300010360	Tropical Forest Soil	VIFVVGFAAGFAWQSYGGGVKKAIAGWSPRLEWLAPATPAGTSSERLKATTLALATARQSLDKLATEINKLQAQDIVEPPRRRATR*
Ga0126372_112091962	3300010360	Tropical Forest Soil	MIFFIGFACGLAWQSYGGAARKAVASWSPHLGWLAPAGAASGTSPERLKAMSLALATARQSLDKLATEIGKLPAQDGDAPRRRAAR*
Ga0126372_119032131	3300010360	Tropical Forest Soil	AVARVLMIFFIGFACGLAWQSYGGAARKAVASWSPHLGWLAPAGAASGTSPERLKTMSLALATARQSLDKLATEISKLPAQDGDAPRRRATR*
Ga0126372_127158071	3300010360	Tropical Forest Soil	RLWLGKLVSFAAARVLMIFLVGFVAGIAWHSYGGAVRKAIAGWSPHLAWLAPAGAPGGTSPDRFKAMSLALAAARQSLDKLGTEISKAQAQDGDAPPRRRR*
Ga0126377_107231371	3300010362	Tropical Forest Soil	MIFFVGFVAGIAWQSYGGAVRKAIAGWSPHLAWLAPAGAPGGTSPDRFKAMSLALATARQSLDKLGTEISKAQAQDGDAPPRRRR*
Ga0126377_130836371	3300010362	Tropical Forest Soil	FAFARVLMILFIGFAAGVAWQSFGSAARKAMASWSPRLGWLAPTAPAGTSAERLKATSLALAAVRQSVDKLTAEIGTLQAERGDQPRRRSTR*
Ga0126381_1002608312	3300010376	Tropical Forest Soil	AGIAWQAYGSGARQAIAGWSPHLAWLAPAGAPGGISPDRLKAMSHDLASARQTLDKLAAELSKVQAQADEAPRRRAGR*
Ga0137392_100014461	3300011269	Vadose Zone Soil	LWLGKLFSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLTPPTVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGE
Ga0137392_100140327	3300011269	Vadose Zone Soil	LWLSKLVSFAFARVLMIFLVGFAAGIAWQSYGDAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLHKLSTEINRLEVQGGEAPRRRATR*
Ga0137392_101651492	3300011269	Vadose Zone Soil	LWLSKPFSFAFARVLVIFLVGFAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137392_110737541	3300011269	Vadose Zone Soil	MIFLVGFAAGLAWQSYGDAARKAIAGWSPRLGWLAPATAPGGTSPKAMSLALATARQSLDKLATEISKVQAQDRDAPRRRATR*
Ga0137392_114535442	3300011269	Vadose Zone Soil	MIFFIGFAAGLAWQSYGGAARLTIAGWSPRLSRLAPAAVPTGTSPERLKAMSLALAAARQSLDKLATEISKLPAQDGEAPRRRATR*
Ga0137391_102776363	3300011270	Vadose Zone Soil	AAGIAWQSYDGFRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQSGDAPRRRATR*
Ga0137391_104299803	3300011270	Vadose Zone Soil	LWLSKPFSFAFARVLVIFLVGFAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGG
Ga0137393_100640451	3300011271	Vadose Zone Soil	GGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137388_106746722	3300012189	Vadose Zone Soil	AAGVAWQSYGGAARKAIASWSPHLGWLAPAAVPGGTSPERLKATTLALAAARQSLDKLANEISKLEAQGGDVPRRRAGR*
Ga0137388_113851581	3300012189	Vadose Zone Soil	IGFAAGIAWQSYGGVARKAIASWSPHLAWLAPAAAPGGTSPERLKAMSLALAAARQSLDKLATEISKLPAQDGDAPRRRATR*
Ga0137388_115869611	3300012189	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGGARKAIASWSPHLAWLAPAGAPGGTSPERLKAMSLALAAARQSLDKLATEIGKLPAQGTSDRRPGPGSRRASER*
Ga0137388_117858561	3300012189	Vadose Zone Soil	IFLVGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR*
Ga0137363_100425843	3300012202	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137399_114527241	3300012203	Vadose Zone Soil	IRLWLGKLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137362_100079171	3300012205	Vadose Zone Soil	RNLITRVRLWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEAQGGEAPRRRATR*
Ga0137377_108626102	3300012211	Vadose Zone Soil	FARVLLIFLLGCAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEIDRLEVQGGDAPRRRATR*
Ga0137377_109612741	3300012211	Vadose Zone Soil	VLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPVPSGGSAERLKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR*
Ga0137377_115782141	3300012211	Vadose Zone Soil	GAARKAIASWSPHLGWLAPAAMPGGTSPERLKATTLALAAARQSIDKLANEISRLEGQGGDVPRRRAGR*
Ga0137360_107210282	3300012361	Vadose Zone Soil	AWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137360_108721081	3300012361	Vadose Zone Soil	ITRVRLWLGKLVSFAFVRVLVIFFVGFAAGFACQSYGGDVRKAIASWSPRLGWLEPSAPAGTSSDRLKATTLALAAARQSLDKLATEISKLQAQDADPPRRRATR*
Ga0137361_100125737	3300012362	Vadose Zone Soil	LWLGKLFSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLTPPTVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEAQGGEAPRRRATR*
Ga0137361_101648061	3300012362	Vadose Zone Soil	LWLGKLFSFAFARVLMIFLLGFAAGIAWQSYGGAARKAMASWSPHLAWLAPAPASSGGSAERFKAVSLALTSARQSLDKLSTEIN
Ga0137390_100105297	3300012363	Vadose Zone Soil	LWLSKLVSFAFARVLMIFLVGFAAGIAWQSYGDAARKTIASWYPHLAWLATATVPSGGSTVRFKALLLALTSARQSLHKLSTEINRLEVQGGEAPRRRATR*
Ga0137358_102906043	3300012582	Vadose Zone Soil	AFVRVLMIFLLGFAASIAWQSYGCGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137398_100581881	3300012683	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEISK
Ga0137398_103595252	3300012683	Vadose Zone Soil	LVFAASIAWQSYGGGVRKTIAGWSPHLAWLAPVPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAP
Ga0137398_104675684	3300012683	Vadose Zone Soil	GFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137398_112020641	3300012683	Vadose Zone Soil	LGKLVSFAFVRVLVIFVVGFAAGFAWQSYGSASRKAIAGWSPHLGWLAPAGAAAGTSPDRLKATTFALATARQSLDKLAAEISKLQAQDADPPRRRATR*
Ga0137395_101634552	3300012917	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEA
Ga0137395_103605292	3300012917	Vadose Zone Soil	ERAISLSNFSRSRPTTKPHGAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR*
Ga0137395_106708302	3300012917	Vadose Zone Soil	VLLIFLLGFAAGIAWQSYGGGGRKAIAGWSPRLAWLAPAPSGGSAERFKAVSLALALARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137396_105120561	3300012918	Vadose Zone Soil	MIFVIGFAAGIAWQSYGGATRKAIASWSPHLGWLAPAAVPVGTSPERLKATTLALAAARQSLDKLANEIGKLETQGGDVPRRR
Ga0137359_101271652	3300012923	Vadose Zone Soil	MIFVVGFAAGMAWQSYGSEVRKTIANWSPHLAWLAPAAAPAGTSAERLKATSLALATARQSLDKLATEISKLQPQDGDAPRRRATR*
Ga0137359_106473602	3300012923	Vadose Zone Soil	WQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137359_108004692	3300012923	Vadose Zone Soil	IFFVGFVAGIAWQSYGGAVRQAIAGWSPPLTWLAPAGAPGGTSADRFKAMSLALATARQSLDKLGTEISKAQAQDGDGPPRRKR*
Ga0137419_113784281	3300012925	Vadose Zone Soil	GLAWQSYGDAARKAIAGWSPRLGWLAPATAPGGTSPERLKAMSLALATARQSLDKLATEISKVQAQDRDAPRRRATR*
Ga0137416_104082422	3300012927	Vadose Zone Soil	LWLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALASARQSLDKLSTE
Ga0137416_107129932	3300012927	Vadose Zone Soil	FARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137416_117253002	3300012927	Vadose Zone Soil	FARVLMIFLVGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR*
Ga0137416_118353771	3300012927	Vadose Zone Soil	ITRIRLWLGKLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSTERLKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137404_104709532	3300012929	Vadose Zone Soil	LWLGKLFLLAFVRVLMIFLLGFAASIAWQSYGDGVRKAMSGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR*
Ga0137410_102357812	3300012944	Vadose Zone Soil	LWLGKLFSLAFVRVVMIFLLGFAAGIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR*
Ga0137410_107214802	3300012944	Vadose Zone Soil	WQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR*
Ga0137410_112766512	3300012944	Vadose Zone Soil	LWLSKLVSFAFARVLMIFLVGFAAGIACQSYGDAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLHKLSTEINRLEVQGGEAPRRR
Ga0126375_115972642	3300012948	Tropical Forest Soil	GIAWQSYGGAVRKAIAGWSPHLAWLAPAGAPGGTSPDRFKAMSLALAAARQSLDKLANEISKLEAQGGDVPRRRAGR*
Ga0126369_113958612	3300012971	Tropical Forest Soil	MNRIMRARLWLGKLASFAFARVLMIFVIGFVVGVAWQSYGGEARKTIASWSPHLSWLAPSAASASSERIRAISLALATARQNIDKVASEINRLPAQDGDAARRRTNR*
Ga0137418_100305342	3300015241	Vadose Zone Soil	LWLGKLFSLAFVRVLMIFLVGFAASIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR*
Ga0137418_101161144	3300015241	Vadose Zone Soil	AGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR*
Ga0137418_103472481	3300015241	Vadose Zone Soil	ISNLIVRVRLWLGKLVSLAFVRVLVVFVVGFAAGFAWQSYGGEVKKAIASWSPRLGWLAPSAPAGTASDRLKATTLALATARQSLDRLATEIGKLQAQDADPPRRRATR*
Ga0137418_103553921	3300015241	Vadose Zone Soil	VLMIFLVGFAAGLAWQSYGDAARKAIAGWSPRLGWLAPATAPGGTSPERLKAMSLALATARQSLDKLGTEISKAQAQDGDGPPRRKR*
Ga0137412_101568461	3300015242	Vadose Zone Soil	LWLSKPFSFAFARVLVIFLVGFAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEIN
Ga0137409_100898984	3300015245	Vadose Zone Soil	LWLGKLFSLAFVRVVMIFLLGFAAAIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR*
Ga0182037_109808112	3300016404	Soil	WQSYGGAARKAVASWSPHLGWLAPAGAASGTSPERLKAMSLALATEISKLPAQDGDAPRRRATR
Ga0182039_114137362	3300016422	Soil	GFAAGMAWQSYGGAARKSIAGWSPQHLAWLAPAAVPGGTSPDRIKAMTLALATARQSLDKLATEISKVQAADGDAPRRRAAR
Ga0066662_113174371	3300018468	Grasslands Soil	VLIGVRPRSVDFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR
Ga0179594_102161942	3300020170	Vadose Zone Soil	FLLGFAAGIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR
Ga0179596_101714961	3300021086	Vadose Zone Soil	AWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR
Ga0126371_131647051	3300021560	Tropical Forest Soil	RLWLAKLVSFAVARVLMIFFIGFACGLAWQSYGGAARKAVASWSPHLGWLAPAGAASGTSPERLKAMSLALATARQSLDKLATEIGKLPAQDGDAPRRRATR
Ga0137417_14862101	3300024330	Vadose Zone Soil	VARQAFSLAFARVLTFFSPWFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPHPCPLAVLPSGSKQVSLALASARQSLDKLSTEINRLEVQGGKHRVAEPRVK
Ga0209438_11529151	3300026285	Grasslands Soil	FARVLVIFVVGFAAGFAWQSYGGEVRKAIASWSPRLGWLAPSAPAGTSSDRLKATTLALATARQSLDKLATEISKLQAQDADPPRRRATR
Ga0209131_10211208	3300026320	Grasslands Soil	LGFAAGIAWQSYGGAVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQNLDKLATEISKLPAQDGDAPRRRATR
Ga0257170_10083781	3300026351	Soil	AAGIAWQSYDGFRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR
Ga0257170_10423961	3300026351	Soil	ILIVGFAAGVAWQSYGGAARKAIASWSPHLGWLAPAAVPGGTSPERLKATTLALAAARQSIDKLANEISKLEGQGGDVPRRRAGR
Ga0257150_10110411	3300026356	Soil	KLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPFGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR
Ga0257163_10366411	3300026359	Soil	NLIVRVRLWLGKLVSFAFARVLMIFVVGFAAGVAWQSYGGEARKTIASWSPHLAWLATAPASAGTSAERLKATSLALAEARQSFDKLTTAISKLQAQDIRDARPASRRAGQR
Ga0257173_10626891	3300026360	Soil	WLGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR
Ga0257176_10600082	3300026361	Soil	SLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR
Ga0257167_10789711	3300026376	Soil	ARVLVIFVVGFAAGFAWQSYGGEVRKAIASWSPRLGWLAPSAPAGTSSDRLKATTLALATARQSLDKLATEISKLQAQDADPPRRRATR
Ga0257171_10471621	3300026377	Soil	LMIFLVGFAAGLAWQSYGDAARKAIAGWSPRLGWLAPATAPGGTSPERLKAMSLALATARQSLDKLATEISKVQAQDRDAPRRRATR
Ga0257172_10318842	3300026482	Soil	ARIRLWLGKLVSFAFARVLMIFVVGFAAGVAWQSYGGEARKTIASWSPHLAWLATAPASAGTSAERLKATSLALAEARQSFDKLTTAISKLQAQDIRDARPASRRAGQR
Ga0257160_10724222	3300026489	Soil	GFAAGIAWQSYGCGVRKAIAGWSPRLTWLAPAPAPFGGSAERFKAVSLALTSARQSLDKLSTEISKLPAQDGDAPRRRATR
Ga0257153_10240873	3300026490	Soil	RVLMIFLVGFAAGIACQSYGGAARKTIAGWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR
Ga0257168_10653962	3300026514	Soil	SLAFARVLMIFLVGFAAGIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGDAPRRRATR
Ga0257158_10897071	3300026515	Soil	LWLGKLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQDGDAPRRRATR
Ga0179587_102190972	3300026557	Vadose Zone Soil	VIFVVGFAAGFAWQSYGGEVRKAIASWSPRLGWLAPSAPAGTSSDRLKATTLALATARQSLDKLATEISKLQAQDADPPRRRATR
Ga0179587_103257171	3300026557	Vadose Zone Soil	RLWLGKLFSLAFARVLTIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPVLSGGSTERLKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRATR
Ga0179587_105693072	3300026557	Vadose Zone Soil	LAFARVLMIFSIGFAAGIAWQSYGGAARTAIASWSPHLDWLAPAAAPGGTSPERLKAMSLALAAARQSLDKLATEMSKLPAQDGDAPRRRATR
Ga0209179_10133683	3300027512	Vadose Zone Soil	LWLGKLVSFAFARVLMILIVGFAAGVAWQSYGGAARKAIASWSPHLGWLAPAAVPGGTSPERLKATTLALAAARQSIDKLANEISKLEAQGGDVPRRRAGR
Ga0209179_10204181	3300027512	Vadose Zone Soil	AGIAWLSYGGAARKAIATWSPHLGWLAPAAVPGGASPERLKATTLALAAARQSIDKLANEISKLEAQGGDVPRRRAGR
Ga0209106_10295583	3300027616	Forest Soil	WQSYGGAVRQAIAGWSPHLTWLAPAGAPGGTSADRFKAMSLALATARQSLDKLGTEISKAQAQDGDGPPRRKR
Ga0209388_11537811	3300027655	Vadose Zone Soil	RSVDFSPWFCAGIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR
Ga0209588_10872571	3300027671	Vadose Zone Soil	PRSVDFSPWFCAGIAWQSYGGAVRKAIAGWSPRLAWVAPAAVPGGTSPERLKAMSLALAAARQNLDKLATEISKLPAQDGDAPRRRATR
Ga0209180_101116565	3300027846	Vadose Zone Soil	MIFVVGFAAGVVWQSYGGAARKTIASWSPHLGWLAPAAVPVGTSPERLKATTLALAAARQSLDKLANEIGKLETQGGDVPRRRAGR
Ga0209180_106074112	3300027846	Vadose Zone Soil	GKLFSLAFVRVLMIFLLGFAASIAWQSYGGGVRKAIAGWSPHLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGEAPRRRAMR
Ga0209579_104090151	3300027869	Surface Soil	RLVSFAVARVLMIFLVGFAAGIGWQSFGGGDRKAVAGWSPYLAWLAPAAPPAGTSPDRFKAISLALATTRQNLDKLAKEIGKVQAQDGEAPRASNPGSRPSARGSTTSHR
Ga0209465_104539172	3300027874	Tropical Forest Soil	IRNVRLWLAKLVSFAVARVLMIFFIGFACGLAWQSYGGAARKAVASWSPHLGWLAPAGAASGSSPERLKTMSLALATARQSLDKLATEISKLPAQDGDAPRRRATR
Ga0209283_109682871	3300027875	Vadose Zone Soil	FAAGFVWQSYGGAARKAIASWSPYLGWLAPAGAAAGTSPDRLKATTLALATARQSLDKLATEISKLQAQDADPPRRRATR
Ga0209488_100734431	3300027903	Vadose Zone Soil	LGKLVSFAFARVLMIFLVGFAAGIAWQSYGGAARKTIASWSPHLAWLAPATVPSGGSAERFKAVSLALTSARQSLDKLSTEINRLEVQGGEAPRRRATR
Ga0137415_100350231	3300028536	Vadose Zone Soil	RIRLWLGKLFSLAFARVLLIFLLGFAAGIAWQSYGGGVRKAIAGWSPRLAWLAPAPAPSGGSAERFKAVSLALASARQSLDKLSTEINRLEVQGGDAPRRRATR
Ga0318561_106477252	3300031679	Soil	AYGGEARKAIAGWSPHLAWVAPAPAPEGTSADRFKAMSLALTTARQSLDKLGTEISKAQAQDIGKAQDGAAPKRKR
Ga0307468_1001060634	3300031740	Hardwood Forest Soil	FVGFVAGIAWQSYGGAVRKAIAGWSPHLAWLAPAGAPGGTSPDRFKAMSLALATARQSLDKLGTEISKAQVQDGDAPPRRRR
Ga0306923_106935062	3300031910	Soil	LLPAYGGAARKSIAGWSPQHLAWLAPAAVPGGTSPDRIKAMTLALATARQSLDKLATEISKVQAADGDAPRRRAAR
Ga0306924_107478273	3300032076	Soil	GAARKSIAGWSPQHLAWLAPAAVPGGTSADRIKAMTLALATARQSLDKLATEISKVQAGDGDAPRRRAAR
Ga0306924_123618582	3300032076	Soil	ARSWFGKVVSFAVARVLVIFFIGFAAGLAWQSYSGPVRKAIAGWSPRLAWVAPAAAPSGPSPDQLKATSLALAAARQSIDKLTTELNKLSAPSEKKTRTSRRAQGT
Ga0335079_101438242	3300032783	Soil	DKLIAFRFARSLMMFFIGVAAALIWQWYGGVARKAAASWSPHLAWLAPAPSPGSAERLKATSLALAAVRQSVDKLATEMSKLAQLSGLGRKSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052907

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences