Metagenome / Metatranscriptome Family F053452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	81 residues
Representative Sequence	LVKLQSNNVPTALIEAKSVEDNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAMHDYTFSMQPNDVALSPIRSRCFDF
Number of Associated Samples	88
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.86 %
% of genes near scaffold ends (potentially truncated)	90.78 %
% of genes from short scaffolds (< 2000 bps)	95.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.574 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (27.660 % of family members)
Environment Ontology (ENVO)	Unclassified (48.227 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.539 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.63% β-sheet: 28.04% Coil/Unstructured: 52.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00581	Rhodanese	28.37
PF07883	Cupin_2	2.84
PF00034	Cytochrom_C	2.84
PF01925	TauE	1.42
PF00032	Cytochrom_B_C	1.42
PF00912	Transgly	1.42
PF04820	Trp_halogenase	1.42
PF13417	GST_N_3	0.71
PF13631	Cytochrom_B_N_2	0.71
PF07750	GcrA	0.71
PF03466	LysR_substrate	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.42
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	1.42
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	1.42
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	1.42
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	1.42
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.57 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.61 %
Unclassified	root	N/A	40.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.26 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.13 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.13 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.42 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.26 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.13 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	2.13 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.42 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.26 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	2.13 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	2.13 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.42 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.26 %
Burkholderia cenocepacia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	2.13 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	2.13 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.42 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1093264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1023274	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1071779	Not Available	526	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10121012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10098045	Not Available	619	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1011175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1555	Open in IMG/M
3300000955\|JGI1027J12803_100755131	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300004479\|Ga0062595_102108864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005332\|Ga0066388_101192704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300005332\|Ga0066388_101425193	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005332\|Ga0066388_101725169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300005332\|Ga0066388_102530430	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300005332\|Ga0066388_104208371	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300005332\|Ga0066388_104246729	Not Available	730	Open in IMG/M
3300005332\|Ga0066388_104678017	Not Available	696	Open in IMG/M
3300005332\|Ga0066388_106025522	Not Available	612	Open in IMG/M
3300005332\|Ga0066388_106199407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300005363\|Ga0008090_15207241	Not Available	623	Open in IMG/M
3300005406\|Ga0070703_10606016	Not Available	506	Open in IMG/M
3300005434\|Ga0070709_10137409	All Organisms → cellular organisms → Bacteria → Proteobacteria	1676	Open in IMG/M
3300005713\|Ga0066905_102345250	Not Available	500	Open in IMG/M
3300005764\|Ga0066903_104000901	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300005764\|Ga0066903_104278700	Not Available	763	Open in IMG/M
3300005764\|Ga0066903_104620252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300005764\|Ga0066903_104870015	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300005764\|Ga0066903_105675078	Not Available	656	Open in IMG/M
3300005764\|Ga0066903_107526574	Not Available	562	Open in IMG/M
3300006051\|Ga0075364_10895107	Not Available	604	Open in IMG/M
3300006175\|Ga0070712_100238554	All Organisms → cellular organisms → Bacteria → Proteobacteria	1447	Open in IMG/M
3300006852\|Ga0075433_10799312	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300006854\|Ga0075425_100926435	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300006871\|Ga0075434_100511088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1222	Open in IMG/M
3300006871\|Ga0075434_101337776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300006871\|Ga0075434_101557191	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300009012\|Ga0066710_104049336	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009137\|Ga0066709_104308596	Not Available	519	Open in IMG/M
3300010043\|Ga0126380_10236633	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300010043\|Ga0126380_10354830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1069	Open in IMG/M
3300010043\|Ga0126380_10373910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1047	Open in IMG/M
3300010043\|Ga0126380_11148947	Not Available	666	Open in IMG/M
3300010046\|Ga0126384_10633059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	940	Open in IMG/M
3300010046\|Ga0126384_11335787	Not Available	666	Open in IMG/M
3300010046\|Ga0126384_11722385	Not Available	593	Open in IMG/M
3300010046\|Ga0126384_11751844	Not Available	589	Open in IMG/M
3300010047\|Ga0126382_11010831	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300010048\|Ga0126373_13209116	Not Available	509	Open in IMG/M
3300010358\|Ga0126370_10423056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300010358\|Ga0126370_10775122	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300010358\|Ga0126370_12187684	Not Available	545	Open in IMG/M
3300010358\|Ga0126370_12658337	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_11384296	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300010361\|Ga0126378_10959307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300010361\|Ga0126378_11335809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300010361\|Ga0126378_13338646	Not Available	510	Open in IMG/M
3300010366\|Ga0126379_10404410	Not Available	1414	Open in IMG/M
3300010366\|Ga0126379_10457177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1339	Open in IMG/M
3300010366\|Ga0126379_12783355	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_13441971	Not Available	530	Open in IMG/M
3300010376\|Ga0126381_100979551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300010376\|Ga0126381_101215610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300010376\|Ga0126381_101687718	Not Available	915	Open in IMG/M
3300010376\|Ga0126381_101903044	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300010376\|Ga0126381_102903030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	683	Open in IMG/M
3300010396\|Ga0134126_11795163	Not Available	672	Open in IMG/M
3300010398\|Ga0126383_10515508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1256	Open in IMG/M
3300010398\|Ga0126383_10739349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300010398\|Ga0126383_11976977	Not Available	671	Open in IMG/M
3300010868\|Ga0124844_1284595	Not Available	567	Open in IMG/M
3300010868\|Ga0124844_1296946	Not Available	548	Open in IMG/M
3300010868\|Ga0124844_1318235	Not Available	515	Open in IMG/M
3300012198\|Ga0137364_10615346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	819	Open in IMG/M
3300012200\|Ga0137382_10841621	Not Available	661	Open in IMG/M
3300012204\|Ga0137374_10677325	Not Available	777	Open in IMG/M
3300012207\|Ga0137381_11409932	Not Available	589	Open in IMG/M
3300012211\|Ga0137377_11107773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	722	Open in IMG/M
3300012211\|Ga0137377_11178459	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012358\|Ga0137368_10373635	Not Available	942	Open in IMG/M
3300012362\|Ga0137361_11417650	Not Available	618	Open in IMG/M
3300012582\|Ga0137358_10155709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1557	Open in IMG/M
3300012925\|Ga0137419_11906086	Not Available	510	Open in IMG/M
3300012948\|Ga0126375_10529548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300012948\|Ga0126375_11470750	Not Available	581	Open in IMG/M
3300012951\|Ga0164300_10157543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300012971\|Ga0126369_11469706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	771	Open in IMG/M
3300012971\|Ga0126369_12263737	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300012971\|Ga0126369_13161232	Not Available	539	Open in IMG/M
3300015374\|Ga0132255_104187227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300016294\|Ga0182041_10696627	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300016371\|Ga0182034_11221249	Not Available	654	Open in IMG/M
3300016387\|Ga0182040_11759466	Not Available	530	Open in IMG/M
3300016404\|Ga0182037_11342038	Not Available	631	Open in IMG/M
3300016422\|Ga0182039_11610082	Not Available	593	Open in IMG/M
3300018433\|Ga0066667_11414399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	611	Open in IMG/M
3300020579\|Ga0210407_11242916	Not Available	559	Open in IMG/M
3300021478\|Ga0210402_10185613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	1907	Open in IMG/M
3300021560\|Ga0126371_10458230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300021560\|Ga0126371_12870443	Not Available	584	Open in IMG/M
3300021560\|Ga0126371_13712764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300025898\|Ga0207692_10133920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300025906\|Ga0207699_10207412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300026310\|Ga0209239_1064585	All Organisms → cellular organisms → Bacteria → Proteobacteria	1613	Open in IMG/M
3300026310\|Ga0209239_1245419	Not Available	619	Open in IMG/M
3300026319\|Ga0209647_1348799	Not Available	502	Open in IMG/M
3300026490\|Ga0257153_1098962	Not Available	579	Open in IMG/M
3300027846\|Ga0209180_10526901	Not Available	660	Open in IMG/M
3300031543\|Ga0318516_10046521	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300031544\|Ga0318534_10261010	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300031546\|Ga0318538_10105137	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300031679\|Ga0318561_10615687	Not Available	598	Open in IMG/M
3300031740\|Ga0307468_100408853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300031764\|Ga0318535_10044975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1826	Open in IMG/M
3300031770\|Ga0318521_10149035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300031770\|Ga0318521_10556190	Not Available	692	Open in IMG/M
3300031781\|Ga0318547_10639008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300031798\|Ga0318523_10508028	Not Available	596	Open in IMG/M
3300031821\|Ga0318567_10352277	Not Available	832	Open in IMG/M
3300031833\|Ga0310917_10277714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300031833\|Ga0310917_10513013	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300031860\|Ga0318495_10051735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1820	Open in IMG/M
3300031880\|Ga0318544_10143024	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300031890\|Ga0306925_10021480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6449	Open in IMG/M
3300031910\|Ga0306923_10957309	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300031912\|Ga0306921_10341195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1752	Open in IMG/M
3300031912\|Ga0306921_11610123	Not Available	705	Open in IMG/M
3300031941\|Ga0310912_10056983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2766	Open in IMG/M
3300031942\|Ga0310916_10011647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5898	Open in IMG/M
3300031942\|Ga0310916_10218651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1598	Open in IMG/M
3300031942\|Ga0310916_11470301	Not Available	556	Open in IMG/M
3300031947\|Ga0310909_11191868	Not Available	616	Open in IMG/M
3300032001\|Ga0306922_11308211	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300032039\|Ga0318559_10253604	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300032041\|Ga0318549_10275320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	758	Open in IMG/M
3300032055\|Ga0318575_10310332	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300032055\|Ga0318575_10590082	Not Available	563	Open in IMG/M
3300032059\|Ga0318533_10553597	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300032063\|Ga0318504_10177045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300032076\|Ga0306924_10036670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5360	Open in IMG/M
3300032090\|Ga0318518_10196792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300032261\|Ga0306920_100038915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6861	Open in IMG/M
3300032261\|Ga0306920_101355051	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.04%
Host-Associated	Host-Associated	4.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.04%
Plants	Host-Associated → Plants	4.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.01%
Loam	Environmental → Terrestrial → Soil → Loam	17.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10932641	2228664022	Soil	KPVSLVKLQSNSVPTALIEAKSVENNQIFIAPLLMRHVMPLLMQDNELVVSIPDRNGTLHDYTFSMQPNDLSLSAIRSRCFDF
AF_2010_repII_A01DRAFT_10232742	3300000580	Forest Soil	TALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDLALKPIRARCFDF*
AF_2010_repII_A01DRAFT_10717792	3300000580	Forest Soil	TALIEAKSVEDNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAMHDYTFSMQPNDVALSPIRSRCFDF*
AF_2010_repII_A1DRAFT_101210121	3300000597	Forest Soil	HSEHFPFPLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRPIMPLVMQDDELVVSIPERDGAMHSYTFSMQPNDLALGPIRLRWLDF*
AF_2010_repII_A001DRAFT_100980452	3300000793	Forest Soil	QPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDLALKPIRARCFDF*
AP72_2010_repI_A001DRAFT_10111752	3300000893	Forest Soil	LVKLQSNNVPTALVEAKSVESGQIFVSPLLMRHIMPLIMQDDELIVSIPERDGPVHDYTFSMQPNDIALKPIRTRCFDF*
JGI1027J12803_1007551311	3300000955	Soil	NNVPTALIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDRGGALHDYTFSMQPNDLALNPIRSRCFDF*
Ga0062595_1021088641	3300004479	Soil	PFPLKPVSLVKLQSNSVPTALIEAKSVENNQIFIAPLLMRHVMPLLMQDNELVVSIPDRNGTLHDYTFSMQPNDLSLSAIRSRCFDF*
Ga0066388_1011927042	3300005332	Tropical Forest Soil	EAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0066388_1014251932	3300005332	Tropical Forest Soil	KPSSSVQLRSNNVPTVSIEGKSVQNNQIFVDPRPMRHIMPALMQDDQLVVSILGQDGAMHNYTFLMQPNDVALRPIRSRCFDF*
Ga0066388_1017251692	3300005332	Tropical Forest Soil	EHFPFPLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELIASIPDRDGAIHSYTFSMQPNDLALKPIRARCFDF*
Ga0066388_1025304302	3300005332	Tropical Forest Soil	DERLIVSLIHTEQFPFPLKPSSSVQLRSNNVPPVLIEAKSVQNNQIFVDPRPMRHIMPLLMQDDHLVVSIPERDGAMHDYTFSMHF*
Ga0066388_1042083711	3300005332	Tropical Forest Soil	SLVKLQSNNVPTALIEAKSGENNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAVHDYTFSMQPNDVALNPIRSGCFDF*
Ga0066388_1042467292	3300005332	Tropical Forest Soil	LVKLQSNNVPTALFEAKSVENNQIFVAPLLMRHIMPLLMQDDELVVSIPEQDGAVHNYTFSMQPNDLALRPIRSCFDF*
Ga0066388_1046780171	3300005332	Tropical Forest Soil	ALFEAKSVENNQIFVAPLLMRHIMPLLMRDDELVVSIPEQDGAVHNYTFSMEPNDLALRPIRSCFDF*
Ga0066388_1060255222	3300005332	Tropical Forest Soil	NVPTALFEAKSVENNQIFVAPLLMRHIMPLLMRDDELVVSISEQDGAVHNYTFSMQPNDLALRPIRSCFDF*
Ga0066388_1061994071	3300005332	Tropical Forest Soil	VPTALIEAKSVENNQIFVAPLLMRHIMPLLMQDDELVVSIRDWDGATHNYTFSMQPNDLALSPIRSGCFDF*
Ga0008090_152072411	3300005363	Tropical Rainforest Soil	PLKPLFLVKLKSNNVPTAVFEAKSVEHNQIFVAPLLMRHIMPLLMQDDEVVVSVPERDGALHDYTFSMQPNDLALSPIRSRCFDF*
Ga0070703_106060161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	KLQSNNVPTALIEAKSFENNQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALEPIRVRCFDF*
Ga0070709_101374092	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VVKLQSNNVPTALIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDRGGALHDYTFSMQPNDLALNPIRSRCFDF*
Ga0066905_1023452502	3300005713	Tropical Forest Soil	KLHSSNVPTALFEAKSVEYNQIFVAPLLMRHIMPLLMQEDEVAVSIPERDGPRHDYTFSMQPNDLALRPIRACFDF*
Ga0066903_1040009011	3300005764	Tropical Forest Soil	PVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0066903_1042787003	3300005764	Tropical Forest Soil	MHTEQFPFPLKPLFLMKLRSNNVPTALLEAKTVQNNQIFVAPLLTRQILPLLMQDDEVVVSIPDADGAVHDYTFAMQPNELALQPIRSHCFDF*
Ga0066903_1046202521	3300005764	Tropical Forest Soil	NNVPIVSIEGKSVQNNQIFVDPRPMRHMMPALLQDDEVVVSIPERDGAMHDYTFSMQPNDVALGPIRSHCLDF*
Ga0066903_1048700151	3300005764	Tropical Forest Soil	NVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAIHNYTFSMQPNDLALKPIRARCFDF*
Ga0066903_1056750781	3300005764	Tropical Forest Soil	SLIHTEQFPFPLKPSSSVQLRSNNVPTVSIEGKSVQNNQIFVDPRPMRHIMPLLMQADQLVVSIPERGGAMHDYTFSMQPNDVALRPIRSRCFDF*
Ga0066903_1075265741	3300005764	Tropical Forest Soil	LKPVSLVKLQSNNVPTALIEAKSVENNQIFVAPLLMRHIMPLLMQDAELIVSIPDRDGAMHDYTFSMQPNDVALSPIRSRCFDF*
Ga0075364_108951071	3300006051	Populus Endosphere	VSFVHGENFPFPLKPASWVKLHSNNVPTAVLEAKSVQHNQIFVAPLLMRHIMPLLMQDDELVVSIPERDGEVHDYTFSMQPNDLALGQIRSRCFDF*
Ga0070712_1002385543	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LKPVSVVKLQSNNVPTALIEAKGVENNQIFIAPLLMRHVMPLLMQDNELVVSIPDWDGALHDYTFSMQPNDLALGPIRSRCFDF*
Ga0075433_107993121	3300006852	Populus Rhizosphere	FPLEPFSLVKLQSNNAPTALIEGKSVQNNQLFVDPIPMRHVMPLLIQDDELVVSITDRNGAMHNYTFSMQPNDLALRLIRSRCFDF*
Ga0075425_1009264351	3300006854	Populus Rhizosphere	PLEPFSLVKLQSNNAPTALIEGKSVQNNQLFVDPIPMRHVMPLLIQDDELVVSITDRNGAMHNYTFSMQPSDLALRPIRSRCFDF*
Ga0075434_1005110881	3300006871	Populus Rhizosphere	SNNVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDDELVVSIPERDGAMHNYTFPMQPNDLALSPIRSRCFDF*
Ga0075434_1013377762	3300006871	Populus Rhizosphere	TALIEAKSVENNQIFVAPLLMRIIMPLLMQDDELAVSIPDRDGAMHDYTFSMQPNDVALSSIRSRCFDF*
Ga0075434_1015571912	3300006871	Populus Rhizosphere	SNNVPTALIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDRGGALHDYTFSMQPNDLALNPIRSRCFDF*
Ga0066710_1040493361	3300009012	Grasslands Soil	IHTDQFPFPLTPRFLVKLRSNTVPTALIEAKSVQHNQIFVAPLLMRHIMPLLMQDDELGVSIPDSDGTVHDYTFSIQPNDLALRPIRLRCFDF
Ga0066709_1043085962	3300009137	Grasslands Soil	PVSLVKLRSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF*
Ga0126380_102366332	3300010043	Tropical Forest Soil	VKLQSNNVPTALIEGKSVQNNQLFVDPMPMRRVMPLLMQDDELVVSITDRNGVMHNYTFSMQPNDLALRPIRSRCFDF*
Ga0126380_103548301	3300010043	Tropical Forest Soil	SEQFPFPLKPVFLLKLHSGNVPTALFEAKSVASNQMIFVAPLLMRHLMPVLMQEDEIVVSIPERDGTGHDYTFSMQPNDFALRPIRSCFDF*
Ga0126380_103739103	3300010043	Tropical Forest Soil	ERFPFPLLSSSSLKLRSNNVPIVSIEGKSVQNNQIFVDPRPMRHIMPALLQDDELVVSIPERDGAMHDYTFSMQPNDVALGPIRSRCLDF*
Ga0126380_111489471	3300010043	Tropical Forest Soil	IHSEHFPFPLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF*
Ga0126384_106330591	3300010046	Tropical Forest Soil	LRSNNVPIVSIEGKSVQNNQIFVDPRPMRHIMPALLQDDELVVSIPERDGAMHDYTFSMQPNDVALGPIRSRCLDF*
Ga0126384_113357872	3300010046	Tropical Forest Soil	RTAQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF*
Ga0126384_117223852	3300010046	Tropical Forest Soil	VKLQSNNVPTALVEAKSVENGQIFVAPLLMRHIMPLIVQDDELIVSIPERDGPMHDYTFSMQPNDIAL
Ga0126384_117518441	3300010046	Tropical Forest Soil	QLRSNNVPTVSIEGKSIQSNQIFVDPRPMRHIMPLLMQDDQLVVSILGQDGAMHNYTFSMQPNDVALRPIRSRCFDF*
Ga0126382_110108312	3300010047	Tropical Forest Soil	SNNVPTVSIEGKSVQNNQIFVDPRPVRHIMPALMQDDQLVVSSLGQDGAMHNYTFLMQPNDVALRPIRSRCFDF*
Ga0126373_132091161	3300010048	Tropical Forest Soil	QPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126370_104230562	3300010358	Tropical Forest Soil	VSLIHTEQFPFPLEPFSLVKLQSNNMPTALIEGKSVQNNQLFVDPIPMRHVMPLLMQDDQLVVSITDRNGAMHDYTFSMQPNDLALKPIRSRCFDF*
Ga0126370_107751221	3300010358	Tropical Forest Soil	LAVSFIHSEHFPFPLKPVSLVKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF*
Ga0126370_121876841	3300010358	Tropical Forest Soil	NVPTVSIEGKSVQNNQIFVDPRTMRHIMPLLMQDDQLVVSIHGQDRAMHNYTFSMQPNAVALRPIRSRCLDF*
Ga0126370_126583372	3300010358	Tropical Forest Soil	KLQSNNVPTALVEAKNVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126372_113842961	3300010360	Tropical Forest Soil	NNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELIASIPDRDGAIHSYTFSMQPNDLALKPIRARCFDF*
Ga0126378_109593071	3300010361	Tropical Forest Soil	MVHAERFPFPLLSSSSLKLRSNNVPIVSIEGKSVQNNQIFVDPRPMRHIMPALLQDDELVVSIPERDGAMHDYTFSMQPNDVALGPIRSRCLDF*
Ga0126378_111668431	3300010361	Tropical Forest Soil	FPFPLTSSSVVNLRSNNVSTVSIEGRSVQNNQVFVDPRPLRHIMPLVVQDDQLVISIPERNGVMHDYTFSIQPNDVALRPIRSRCFDF*
Ga0126378_113358091	3300010361	Tropical Forest Soil	PTALFEAKSVEYNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGAGHDYTFSMQPNDLALRPIRSCFDF*
Ga0126378_133386461	3300010361	Tropical Forest Soil	HFPFPLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126379_104044103	3300010366	Tropical Forest Soil	MVHAERFPFPLLSSSSLKLRSNNVPIVSIEGKSVQNNQIFVDPRPMRHIMPALLQDDELVVSIPERDGAMHDYTFSMQPNDVALGPI
Ga0126379_104571772	3300010366	Tropical Forest Soil	IHSEHFPFALRPVSLVKLQSNNVPTALIEAKSVEDNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAMHDYTFSMQPNDVALSPIRSGCFDF*
Ga0126379_127833551	3300010366	Tropical Forest Soil	MHTEQFPFPLKPLFLMKLRSNNVPTALLEAKTVQNNQIFVAPLLMQHIMPLLMQDDEVVVSIPDADGAVHDYTFAMQPNELALQPIRSHCFDF*
Ga0126379_134419711	3300010366	Tropical Forest Soil	EHFPFPLQPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126381_1009795512	3300010376	Tropical Forest Soil	LVKLQSNNVPTALIEAKSVEDNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAMHDYTFSMQPNDVALSPIRSRCFDF*
Ga0126381_1012156101	3300010376	Tropical Forest Soil	VPTALIEAKSVENNQIFVAPLLMRHIMPLLMQDDALVVSIRDWDGATHNYTFSMQPNDLALSPIRSGCFDF*
Ga0126381_1016877182	3300010376	Tropical Forest Soil	VPTALFEAKSVASNQMIFVAPLLMRHLMPVLMQEDEIVVSIPERDGTGHDYTFSMQPN
Ga0126381_1019030441	3300010376	Tropical Forest Soil	TALVEAKNVENNQIFVAPVLMRHIMPLVMQDDELIVSIPERDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126381_1029030301	3300010376	Tropical Forest Soil	PVSLVKLQSNSVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDDELVVSIPERDGVVHDYTFSMQPNDLALGSIRARCFDF*
Ga0134126_117951632	3300010396	Terrestrial Soil	FSHSEHFPFPLKPVSVVKLQSNNVPTALIEAKGVENNQIFIAPLLMRHVMPLLMQDNELVVSIPDRNGTLHDYTFSMQPNDLALNPIRSRCFDF*
Ga0126383_105155081	3300010398	Tropical Forest Soil	QSNNVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDDELVASIPERDGVVHDYTFSMQPNDLALGSIRARCFDF*
Ga0126383_107393492	3300010398	Tropical Forest Soil	LVKLQSNNVPTALIEAKSVENGQIFVAPLLMRHIMPLVMQDDELIVSIPERDGPLHDYTFSMRPNDIALKPIRARCFDF*
Ga0126383_119769771	3300010398	Tropical Forest Soil	HFPFPLKPVSMVRLQSNNVPTALVEAKNVENNQIFVAPVLMRHIMPLVMQDDELIVSIPERDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0124844_12845952	3300010868	Tropical Forest Soil	KLHSNNVPTAVFEAKSMESNQIYVAPLLMRHIMPLLMQEDEVVVSIPEWGGAVHDYTFSMQPNDLALRPIRPCFDF*
Ga0124844_12969461	3300010868	Tropical Forest Soil	VKLHSNNVPTAVFEAKSIESNQIFVAPLLMRHIMPLLMQEDEVVVSIPERGGAVHDYTFSMQPNDLALRPIRPCFDF*
Ga0124844_13182351	3300010868	Tropical Forest Soil	KLHSNNVPTAVFEAKSIESNQIFVAPLLMRHIMPLLMQEDEVVVSIPERGGAVHDYTFSMQPNDLALRPIRPCFDF*
Ga0137364_106153463	3300012198	Vadose Zone Soil	VSIEGKSIQNNQIFVDPRPMRHIMLPLLQDDQLVVSISERDGTTHDYTFSLQPNGVALRAIRSRCFGF*
Ga0137382_108416212	3300012200	Vadose Zone Soil	LVKLQSNNVPTAFIEAKSVEHNQIFVAPLSMRHIMPLLMQDDELVVSIPERDGTMHDYTFSMQPNDLALGPIRSRCFDF*
Ga0137374_106773251	3300012204	Vadose Zone Soil	VQLRSNNVPTVSIEGKSVQNNQIFVDPRTMRHIMPLLMQDDQLVVSIPGQDGAMHNCTFSMQPNDVALRPIRSRCLDF*
Ga0137381_114099321	3300012207	Vadose Zone Soil	NNMPTMLIEGKSIQNNQIFIDPRQMRHIMPLLMQDDQLVVSVPGHDGAMHDYTFSMQPNDVALRPIRSHCFDF*
Ga0137377_111077731	3300012211	Vadose Zone Soil	NVPTVSIEGKSIQNNQIFVDPRPMRHIMLPLLQDDQLVVSISERDGTTHDYTFSLQPNGVALRAIRSRCFGF*
Ga0137377_111784591	3300012211	Vadose Zone Soil	TEQFPFPLKPSSSVQLRSNNLPTVSIEGKSIQNNQIFVDPRPMRHMMPLLAQEDQLVVSIPERDGVLHDYTFSMQPNDLALRSIRLHCFEL*
Ga0137368_103736351	3300012358	Vadose Zone Soil	MVSLIHAEQFPFPLQASSSLTLRSNNVPIISIEGKSVQNNQIFVDPRPMRHIMPVLMQDDRLLVSIRDRDGAMHDYTFSMQPHDAALGPIRRCLDF*
Ga0137361_114176502	3300012362	Vadose Zone Soil	MPTMLIEGKSIQNNQIFIDPRQMRHIMPLLLQDDELVVSIPGPDGAMHDYTFSMQPNDVALRPIRSRCFDF*
Ga0137358_101557093	3300012582	Vadose Zone Soil	KPVFLVKLHSSNVPTALFEAKSVEYNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGAGHDYTFSMQPNDLALRPIRSCFDF*
Ga0137419_119060861	3300012925	Vadose Zone Soil	RSKNVPVVSVEGKSIKNDQIFVDPKPMRHIMPLLLQDSYLVVSIPERDGAVHDYTFSTQPNDLTLAPIRSHCFDS*
Ga0126375_105295481	3300012948	Tropical Forest Soil	GKSIQNNQIFVDPRPMPHIMLPLLQDDQLVVSISERDGITHDYTFSLQPNKVALRAIRSRCFGF*
Ga0126375_114707501	3300012948	Tropical Forest Soil	FPFPLKPVSLVKLQSNNVPTALFEAKSVENNQIFVAPLLMRHIMPLLMRDDELVVSIPEQDGAVHNYTFSMQPNDLALRPIRSCFDF*
Ga0164300_101575431	3300012951	Soil	HFPFPLKPVSVVTVQLNNMPTALIEAKGVENNQIFIAPLLMRHVMPLLMQDNELVVSIPDRNGTLHDYTFSMQPNDLALSPFRSRCFDL*
Ga0126369_114697062	3300012971	Tropical Forest Soil	LVKLQSNSVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDDELVVSIPERDGAVHGYTFSMQPSDLALGPIRARCFDF*
Ga0126369_122637372	3300012971	Tropical Forest Soil	EHFPFPLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHSYTFSMQPNDIALKPIRARCFDF*
Ga0126369_131612321	3300012971	Tropical Forest Soil	MHTEQFPFPLKPLFLMKLRSNNVPTALLEAKTVQNNQIFVAPLLTRQILPLLMQDDEVVVSIPDADGAVHDYTFVMKSNELALQPIRSHCFDF*
Ga0132255_1041872272	3300015374	Arabidopsis Rhizosphere	RSNNVPTVSIEGKSLGNNQIVVDPRPLRHIMLPLLQDDQLVVSISERDGITHDYTFSLQPNKVALRAIRSRCFGF*
Ga0182041_106966272	3300016294	Soil	VSLGKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLTMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRAHCFDF
Ga0182034_112212491	3300016371	Soil	KPVSLGKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0182040_117594661	3300016387	Soil	PFPLQPVSLVKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF
Ga0182037_113420381	3300016404	Soil	LIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDAPMHDYTFSMQPNDIALKPIRARCFDF
Ga0182039_116100822	3300016422	Soil	KPVSMVKLQSNNVPTALVEAKNVDNNQIFVAPLLMRHIMPLILQDDELIVSVPERDGPMHDYTFSMQPNDLALKPIRARCFDF
Ga0066667_114143991	3300018433	Grasslands Soil	NNVPTAVLEAKSVEHNQIFVAPLLMRHIMPLLMQDDDLVVSIPERDGAMHDYTFSMQPNDLALGPIRARCFDF
Ga0210407_112429162	3300020579	Soil	LQSNNVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDNELVVSIPDRDGAMHDYTFSMQPNDLALSAIRSRCFDF
Ga0210402_101856134	3300021478	Soil	IEAKSVENNQIFIAPLLMRHIMPLLMQDNELVVSIPDQDGALHDYTFSMQPNDLALGPIRSRCFDF
Ga0126371_104582303	3300021560	Tropical Forest Soil	SLLKLQSNNVPTALIEAKSVEDNQIFIAPLLMRHIMPLLMQDDELVVSIPDRDGAMHAYTFSMQPNDVALSPIRSRCFDF
Ga0126371_128704431	3300021560	Tropical Forest Soil	LVKLQSNNVPTALIEAKSVENSQIFIAPLLMRHIMPLLMQDNELVVSIPEKDGPMHDYTFSMQPNDFALRPIRLRCFDF
Ga0126371_137127641	3300021560	Tropical Forest Soil	LFEAKSVEYNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGPRHDYTFSMQPNDLALGPIRACFDF
Ga0207692_101339201	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VVKLQSNNVPTALIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDRGGALHDYTFSMQPNDLALNPIRSRCFDF
Ga0207699_102074123	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPTALIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDRGGALHDYTFSMQPNDLALNPIRSRCFDF
Ga0209239_10645853	3300026310	Grasslands Soil	HTEHFPFPLKPVSLVKLQSNNVPTALIEAKSVENNQIFIAPLLMRHIMPLLMQDNELVVSIPEKDGPMHDYTFSMQPNDLALRPIRLRCFNF
Ga0209239_12454192	3300026310	Grasslands Soil	NVPTAFIEAKSVEHNQIFVAPLSMRHIMPLLMQDDELVVSIPERDGTMHDYTFSMQPNDLALGPIRSRCFDF
Ga0209647_13487991	3300026319	Grasslands Soil	TEQFPFPLEPFSLVKLQSNNVPTALIEGKSVQNNQLFVDPIPMRHVMPLLIQDDELVVSITDRNGAMHNYTFSMQPNDLALRPIRSRCFDF
Ga0257153_10989621	3300026490	Soil	VFLVKLHSSNVPTALFEAKSVEYNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGAGHDYTFSMQPNDLALRPIRSCFDF
Ga0209180_105269012	3300027846	Vadose Zone Soil	EPFSLVKLQSNNVPTALIEGKSVQNNQLFVDPIPMRHVMPLLIQDDELVVSITDRNGAMHNYTFSMQPNDLALRPIRSRCFDF
Ga0318516_100465212	3300031543	Soil	MVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHGYTFSMQPNDLALKPIRARCFYF
Ga0318534_102610101	3300031544	Soil	MVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHSYTFSMQPNDLALKPIRARCFYF
Ga0318538_101051372	3300031546	Soil	LIHTEQFPFPLMPSSAVQLRSNNVPTVSIEGKSVQNNQIFVDPRTMRHIMPLLMQDDQLVVSIPGQDRAMHNYTFSMQPNAVALRPIRSRCLDF
Ga0318561_106156871	3300031679	Soil	VPTALIEAKSVENNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGAMHDYTFSMQPNDLALRPIRARFDF
Ga0307468_1004088533	3300031740	Hardwood Forest Soil	LIEAKSVENNQIFIAPLIMRHIMPLLMQDDELVVSIPDQDGAMHDYTFSMQPNDLALSPFRSRCFDL
Ga0318535_100449753	3300031764	Soil	PLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHGYTFSMQPNDLALKPIRARCFYF
Ga0318521_101490352	3300031770	Soil	SNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRAHCFDF
Ga0318521_105561902	3300031770	Soil	SEHFPFPLKPVSLVKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF
Ga0318547_106390082	3300031781	Soil	HFPFPLKPVSLVKLQSNNVPTSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALGSIRSRCFDF
Ga0318523_105080281	3300031798	Soil	PLKPVSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHSYTFSMQPNDLALKPIRARCFYF
Ga0318567_103522772	3300031821	Soil	TEQFPFPLMPSSAVQLRSNNVPTVSIEGKSVQNNQIFVDPRTMRHIMPLLMQDDQLVVSIPGQDRAMHNYTFSMQPNAVALRPIRSRCLDF
Ga0310917_102777142	3300031833	Soil	VSFIHSEHFPFPLRPVSLVKLQSNNVPTSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALGSIRSRCFDF
Ga0310917_105130132	3300031833	Soil	LVKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0318495_100517351	3300031860	Soil	EAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHGYTFSMQPNDLALKPIRARCFYF
Ga0318544_101430241	3300031880	Soil	TSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALKPIRARCFDF
Ga0306925_100214806	3300031890	Soil	HFPFPLKPVSLVKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0306923_109573091	3300031910	Soil	VKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF
Ga0306921_103411951	3300031912	Soil	VKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0306921_116101231	3300031912	Soil	HSEHFPFPLKPVSLVKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF
Ga0310912_100569831	3300031941	Soil	YFPFPLRPVSSVRLQSNNVPAALIEAKSVEHNQIFVAPLLMRHIMPLIMQDDELIVSISEQDGPMHDYTFSMQPNDIALKPIRAP
Ga0310916_100116477	3300031942	Soil	EAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHSYTFSMQPNDLALKPIRARCFYF
Ga0310916_102186512	3300031942	Soil	QFPFPLMPSSAVQLRSNNVPTVSIEGKSVQNNQIFVDPRTMRHIMPLLMQDDQLVVSIPGQDRAMHNYTFSMQPNAVALRPIRSRCLDF
Ga0310916_114703011	3300031942	Soil	SLMKLQSNNVPTALIEAKSVENNQIFVAPLLMRHIMPLLMQEDEIVVSIPERDGAMHDYTFSMQPNDLALRPIRARFDF
Ga0310909_111918682	3300031947	Soil	SLVKLQTNNEPTALIEAKSIENNQIFIAPLLMRHIMPLLMQDNELVVSISEKDGAMHDYTFSMQPNDLALRPIRLRCFDF
Ga0306922_113082112	3300032001	Soil	PFPLKPVSLVKLQSNNVPTALIEAKSIENNQIFIAPLLMRHIMPLLMQDNELVVSISEKDGAMHDYTFSMQPNDLALRPIRLRCFDF
Ga0318559_102536042	3300032039	Soil	SEHFPFPLKPVSMVKLQSNNVPTALVEAKNVENSQIFVAPLLMRHIMPLVMEDDELIVSIPERDGAMHDYTFSMQPNDLALRPIRSHCFDF
Ga0318549_102753202	3300032041	Soil	VPTSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALGSIRSRCFDF
Ga0318575_103103322	3300032055	Soil	LQSNNVPTALVEAKNVENSQIFVAPLLMRHIMPLVMEDDELIVSIPERDGAMHDYTFSMQPNDLALRPIRSHCFDF
Ga0318575_105900821	3300032055	Soil	FIHSEHFPFPLKPVSLVKLQSNNVPTSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALGSIRSRCFDF
Ga0318533_105535972	3300032059	Soil	PVSFVKLQSNNVPTARVEAKSVENNQIFVAPLFMRHIMPLVMQDDELVASIPDRDGAMHDYTFSMQPNDLALRPIRSRCFDF
Ga0318504_101770452	3300032063	Soil	SEHFPFPLKPVSLVKLQSNNVPTSLVEAKSVENNQIFVAPLLMRHIMPLIMEDDELVVSIPERDGAMHDYTFSMQPNDLALGSIRSRCFDF
Ga0306924_100366705	3300032076	Soil	PVSLVKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0318518_101967921	3300032090	Soil	VSMVKLQSNNVPTALVEAKNVENNQIFVAPLLMRHIMPLIMEDDELIVSIPDRDGAMHSYTFSMQPNDLALKPIRARCFYF
Ga0306920_1000389151	3300032261	Soil	FPLKPVSLVKLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRARCFDF
Ga0306920_1013550511	3300032261	Soil	KLQSNNVPTALIEAKSVENSQIFVAPLLMRHIMPLIMQDDELIVSIPERDGPMHDYTFSMQPNDIALKPIRAHCFDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences