Metagenome / Metatranscriptome Family F053586

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053586
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	57 residues
Representative Sequence	MERIYDRLERIRQLWKKLELTKPNTSEYAALMNQIRVLSEEYRALIDAPKKPTESK
Number of Associated Samples	81
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.99 %
% of genes near scaffold ends (potentially truncated)	18.44 %
% of genes from short scaffolds (< 2000 bps)	57.45 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.284 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.390 % of family members)
Environment Ontology (ENVO)	Unclassified (41.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.81% β-sheet: 0.00% Coil/Unstructured: 51.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02517	Rce1-like	2.84
PF04255	DUF433	1.42
PF00903	Glyoxalase	1.42
PF07238	PilZ	1.42
PF00589	Phage_integrase	1.42
PF00144	Beta-lactamase	1.42
PF00069	Pkinase	1.42
PF12867	DinB_2	1.42
PF00550	PP-binding	0.71
PF00072	Response_reg	0.71
PF00106	adh_short	0.71
PF02604	PhdYeFM_antitox	0.71
PF13662	Toprim_4	0.71
PF14520	HHH_5	0.71
PF03976	PPK2	0.71
PF01063	Aminotran_4	0.71
PF13432	TPR_16	0.71
PF14492	EFG_III	0.71
PF05598	DUF772	0.71
PF00440	TetR_N	0.71
PF04820	Trp_halogenase	0.71
PF02771	Acyl-CoA_dh_N	0.71
PF00805	Pentapeptide	0.71
PF00535	Glycos_transf_2	0.71
PF00486	Trans_reg_C	0.71
PF02371	Transposase_20	0.71
PF04191	PEMT	0.71
PF00886	Ribosomal_S16	0.71
PF14559	TPR_19	0.71
PF14579	HHH_6	0.71
PF01740	STAS	0.71
PF08327	AHSA1	0.71
PF12706	Lactamase_B_2	0.71
PF13744	HTH_37	0.71
PF00005	ABC_tran	0.71
PF05940	NnrS	0.71
PF08031	BBE	0.71
PF07332	Phage_holin_3_6	0.71
PF01381	HTH_3	0.71
PF01904	DUF72	0.71
PF13641	Glyco_tranf_2_3	0.71
PF00498	FHA	0.71
PF07077	DUF1345	0.71
PF10150	RNase_E_G	0.71
PF00990	GGDEF	0.71
PF13533	Biotin_lipoyl_2	0.71
PF07687	M20_dimer	0.71
PF02687	FtsX	0.71
PF10996	Beta-Casp	0.71
PF13442	Cytochrome_CBB3	0.71
PF13437	HlyD_3	0.71
PF01797	Y1_Tnp	0.71
PF11999	Ice_binding	0.71
PF03734	YkuD	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.67
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	2.84
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	2.84
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.42
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.42
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.42
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.42
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.42
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.71
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.71
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.71
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.71
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.71
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.71
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.71
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.71
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3213	Nitric oxide response protein NnrS	Signal transduction mechanisms [T]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.71
COG4291	Uncharacterized membrane protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.28 %
Unclassified	root	N/A	39.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.28 %
Unclassified	root	N/A	39.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.28 %
Unclassified	root	N/A	39.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.13 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.71 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.71 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.71 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.71 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Flavobacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_32_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_32_9	0.71 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.71 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12266383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300001137\|JGI12637J13337_1000968	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300001154\|JGI12636J13339_1021932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300001593\|JGI12635J15846_10036606	All Organisms → cellular organisms → Bacteria → Acidobacteria	3864	Open in IMG/M
3300001593\|JGI12635J15846_10251792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300002245\|JGIcombinedJ26739_100495691	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300004091\|Ga0062387_100017373	All Organisms → cellular organisms → Bacteria	2880	Open in IMG/M
3300004091\|Ga0062387_100035722	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300004479\|Ga0062595_102282588	Not Available	533	Open in IMG/M
3300004479\|Ga0062595_102341133	Not Available	528	Open in IMG/M
3300005436\|Ga0070713_100055593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3290	Open in IMG/M
3300005439\|Ga0070711_100627414	Not Available	899	Open in IMG/M
3300005537\|Ga0070730_10000372	All Organisms → cellular organisms → Bacteria	54083	Open in IMG/M
3300005537\|Ga0070730_10051788	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300005537\|Ga0070730_10052949	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300005537\|Ga0070730_10091300	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300005537\|Ga0070730_10298984	Not Available	1054	Open in IMG/M
3300005537\|Ga0070730_10415091	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300005537\|Ga0070730_10573334	Not Available	721	Open in IMG/M
3300005610\|Ga0070763_10591586	Not Available	642	Open in IMG/M
3300006050\|Ga0075028_100443537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300006163\|Ga0070715_10528795	Not Available	680	Open in IMG/M
3300006174\|Ga0075014_100717465	Not Available	583	Open in IMG/M
3300006176\|Ga0070765_100688478	Not Available	965	Open in IMG/M
3300006176\|Ga0070765_101544903	Not Available	624	Open in IMG/M
3300006914\|Ga0075436_100239374	Not Available	1290	Open in IMG/M
3300009522\|Ga0116218_1507806	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009824\|Ga0116219_10544476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	640	Open in IMG/M
3300010379\|Ga0136449_100412792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2389	Open in IMG/M
3300010396\|Ga0134126_11193851	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300011120\|Ga0150983_11740583	Not Available	1209	Open in IMG/M
3300012202\|Ga0137363_10078541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2451	Open in IMG/M
3300012931\|Ga0153915_10092725	All Organisms → cellular organisms → Bacteria → Acidobacteria	3189	Open in IMG/M
3300012931\|Ga0153915_10319036	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300014164\|Ga0181532_10024850	All Organisms → cellular organisms → Bacteria	4261	Open in IMG/M
3300014498\|Ga0182019_10006937	All Organisms → cellular organisms → Bacteria	5884	Open in IMG/M
3300014498\|Ga0182019_10059601	All Organisms → cellular organisms → Bacteria → Acidobacteria	2235	Open in IMG/M
3300016750\|Ga0181505_10871059	Not Available	1340	Open in IMG/M
3300017823\|Ga0187818_10228315	Not Available	813	Open in IMG/M
3300017936\|Ga0187821_10504944	Not Available	505	Open in IMG/M
3300017993\|Ga0187823_10103129	Not Available	856	Open in IMG/M
3300018006\|Ga0187804_10460653	Not Available	568	Open in IMG/M
3300018007\|Ga0187805_10102488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1295	Open in IMG/M
3300020579\|Ga0210407_10002391	All Organisms → cellular organisms → Bacteria → Acidobacteria	16178	Open in IMG/M
3300020579\|Ga0210407_10004910	All Organisms → cellular organisms → Bacteria → Acidobacteria	10429	Open in IMG/M
3300020579\|Ga0210407_10056720	Not Available	2929	Open in IMG/M
3300020579\|Ga0210407_10200246	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300020579\|Ga0210407_10216575	All Organisms → cellular organisms → Bacteria → Acidobacteria	1489	Open in IMG/M
3300020579\|Ga0210407_11130847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300020580\|Ga0210403_10000038	All Organisms → cellular organisms → Bacteria	144018	Open in IMG/M
3300020580\|Ga0210403_10040327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_32_9	3733	Open in IMG/M
3300020580\|Ga0210403_10126253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2084	Open in IMG/M
3300020580\|Ga0210403_10349682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300020580\|Ga0210403_10603000	Not Available	886	Open in IMG/M
3300020580\|Ga0210403_11441028	Not Available	520	Open in IMG/M
3300020581\|Ga0210399_10003185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12771	Open in IMG/M
3300020581\|Ga0210399_10005338	All Organisms → cellular organisms → Bacteria → Acidobacteria	9989	Open in IMG/M
3300020581\|Ga0210399_10008324	All Organisms → cellular organisms → Bacteria → Acidobacteria	8105	Open in IMG/M
3300020581\|Ga0210399_10037889	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300020581\|Ga0210399_10176181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1774	Open in IMG/M
3300020581\|Ga0210399_10270059	Not Available	1419	Open in IMG/M
3300020581\|Ga0210399_10414400	Not Available	1123	Open in IMG/M
3300020581\|Ga0210399_10423092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300020581\|Ga0210399_10695541	Not Available	836	Open in IMG/M
3300020583\|Ga0210401_10019082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6598	Open in IMG/M
3300020583\|Ga0210401_10092646	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300020583\|Ga0210401_10133239	Not Available	2327	Open in IMG/M
3300020583\|Ga0210401_10173396	Not Available	2011	Open in IMG/M
3300020583\|Ga0210401_10595883	Not Available	967	Open in IMG/M
3300020583\|Ga0210401_10779684	Not Available	816	Open in IMG/M
3300020583\|Ga0210401_11330234	Not Available	576	Open in IMG/M
3300021088\|Ga0210404_10295574	Not Available	890	Open in IMG/M
3300021088\|Ga0210404_10336359	Not Available	836	Open in IMG/M
3300021168\|Ga0210406_10005675	All Organisms → cellular organisms → Bacteria	13024	Open in IMG/M
3300021168\|Ga0210406_10128845	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300021168\|Ga0210406_10311448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300021168\|Ga0210406_10476275	Not Available	990	Open in IMG/M
3300021171\|Ga0210405_10095386	Not Available	2347	Open in IMG/M
3300021171\|Ga0210405_10308120	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300021180\|Ga0210396_10183910	Not Available	1870	Open in IMG/M
3300021180\|Ga0210396_10749519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300021405\|Ga0210387_10868057	Not Available	795	Open in IMG/M
3300021405\|Ga0210387_11565065	Not Available	562	Open in IMG/M
3300021407\|Ga0210383_10611599	Not Available	939	Open in IMG/M
3300021420\|Ga0210394_10050862	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300021432\|Ga0210384_10024765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5688	Open in IMG/M
3300021432\|Ga0210384_10043975	All Organisms → cellular organisms → Bacteria	4087	Open in IMG/M
3300021474\|Ga0210390_10519741	Not Available	1002	Open in IMG/M
3300021478\|Ga0210402_10003547	All Organisms → cellular organisms → Bacteria	14564	Open in IMG/M
3300021478\|Ga0210402_10041556	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300021478\|Ga0210402_10108089	Not Available	2504	Open in IMG/M
3300021479\|Ga0210410_10003471	All Organisms → cellular organisms → Bacteria → Acidobacteria	13945	Open in IMG/M
3300021479\|Ga0210410_10012036	All Organisms → cellular organisms → Bacteria → Acidobacteria	7440	Open in IMG/M
3300021559\|Ga0210409_11262534	Not Available	614	Open in IMG/M
3300022508\|Ga0222728_1086585	Not Available	577	Open in IMG/M
3300022529\|Ga0242668_1158551	Not Available	502	Open in IMG/M
3300024178\|Ga0247694_1000140	All Organisms → cellular organisms → Bacteria	22217	Open in IMG/M
3300024179\|Ga0247695_1011128	Not Available	1266	Open in IMG/M
3300024182\|Ga0247669_1008756	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300024182\|Ga0247669_1025567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300024290\|Ga0247667_1009484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1987	Open in IMG/M
3300024290\|Ga0247667_1038574	Not Available	902	Open in IMG/M
3300024323\|Ga0247666_1003111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3779	Open in IMG/M
3300024323\|Ga0247666_1126976	Not Available	507	Open in IMG/M
3300024331\|Ga0247668_1099021	Not Available	590	Open in IMG/M
3300025928\|Ga0207700_10060072	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300027587\|Ga0209220_1059158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300027660\|Ga0209736_1000070	All Organisms → cellular organisms → Bacteria	33719	Open in IMG/M
3300027674\|Ga0209118_1014904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2568	Open in IMG/M
3300027674\|Ga0209118_1098945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027787\|Ga0209074_10469788	Not Available	540	Open in IMG/M
3300027795\|Ga0209139_10199221	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027842\|Ga0209580_10373676	Not Available	710	Open in IMG/M
3300027857\|Ga0209166_10000270	All Organisms → cellular organisms → Bacteria → Acidobacteria	64731	Open in IMG/M
3300027857\|Ga0209166_10001504	All Organisms → cellular organisms → Bacteria → Acidobacteria	19194	Open in IMG/M
3300027857\|Ga0209166_10008201	All Organisms → cellular organisms → Bacteria → Acidobacteria	6934	Open in IMG/M
3300027857\|Ga0209166_10257173	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300027889\|Ga0209380_10042624	Not Available	2572	Open in IMG/M
3300028047\|Ga0209526_10026635	All Organisms → cellular organisms → Bacteria	4056	Open in IMG/M
3300029636\|Ga0222749_10309069	Not Available	819	Open in IMG/M
3300030844\|Ga0075377_11757566	Not Available	594	Open in IMG/M
3300031231\|Ga0170824_102695835	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300031231\|Ga0170824_125371747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1863	Open in IMG/M
3300031446\|Ga0170820_11265418	Not Available	1317	Open in IMG/M
3300031708\|Ga0310686_115207057	All Organisms → cellular organisms → Bacteria	14986	Open in IMG/M
3300031720\|Ga0307469_10199285	Not Available	1561	Open in IMG/M
3300031720\|Ga0307469_12139785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031720\|Ga0307469_12379744	Not Available	517	Open in IMG/M
3300031753\|Ga0307477_10089693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2134	Open in IMG/M
3300031754\|Ga0307475_10072519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2635	Open in IMG/M
3300031962\|Ga0307479_10075189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3267	Open in IMG/M
3300031962\|Ga0307479_10441880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300032160\|Ga0311301_10156941	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300032180\|Ga0307471_101576144	Not Available	813	Open in IMG/M
3300033402\|Ga0326728_10022096	All Organisms → cellular organisms → Bacteria	11855	Open in IMG/M
3300033402\|Ga0326728_10124203	All Organisms → cellular organisms → Bacteria → Acidobacteria	2948	Open in IMG/M
3300033405\|Ga0326727_10077224	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300033480\|Ga0316620_12014675	Not Available	574	Open in IMG/M
3300033486\|Ga0316624_10052244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2618	Open in IMG/M
3300033513\|Ga0316628_101644800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300033513\|Ga0316628_103589107	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.29%
Host-Associated	Host-Associated	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.36%
Aquatic	Environmental → Aquatic	9.93%
Plants	Host-Associated → Plants	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.23%
Freshwater	Environmental → Aquatic → Freshwater	8.51%
Peat	Environmental → Terrestrial → Peat	2.13%
Sediment	Environmental → Aquatic → Sediment	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.50%
Loam	Environmental → Terrestrial → Soil → Loam	13.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.39%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.13%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122663833	3300000789	Soil	MERIYDTLQRIQSLWKELERTKPDTSEHLALMNQIRALSDEYRALIDAPKKHTESK*
JGI12637J13337_10009682	3300001137	Forest Soil	MEGIYDRLQRILQLWKKLELTKPNTSEYVALMNQIRVLSEEYRERIEAHKSPKTN*
JGI12636J13339_10219322	3300001154	Forest Soil	MERIYDRLERILQLWKKLELTKPNTSEYVALMNQIRVLSEEYTALIDAPKKPRESN*
JGI12635J15846_100366065	3300001593	Forest Soil	MERIYDRLEHIKSLWKELELTKPDTSEYNALLNQIRALSEEYRALIDVPKKPRESK*
JGI12635J15846_102517922	3300001593	Forest Soil	MERIYDRLERILQLWKKLELTKPNTSEYAALMNQIRVLSEEYTALIDAPKKPRESN*
JGIcombinedJ26739_1004956912	3300002245	Forest Soil	MERIFDSLQRITQLWKKLALTKPNTSEYAALMDEIRILSEEYRALIEVPKNSQKSK*
Ga0062387_1000173734	3300004091	Bog Forest Soil	MERIYDTLQRIQSLWKELEQKKPDSSEYVALMNQIRALSDDYRALIDAPKKPRESK*
Ga0062387_1000357223	3300004091	Bog Forest Soil	MERIFDRVLDRLQPIQQLWKKLERTPPHTSEYIALMKKIRVLSEEYKAFVDAPTKPRETK
Ga0062595_1022825881	3300004479	Soil	MERIYDRLERIRQLWKKLELTKPNTSEYAAIMNQIRVLSEEYRALIDAPKKPTESK*
Ga0062595_1023411331	3300004479	Soil	MERIYDRLDQIRSLWKKLELTKPDTSEYEVIMNQIRALSDEYRALIDVPKKPTKSE*
Ga0070713_1000555937	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MERIYDRLDRIRSLWKKLELTKPDTSEYEAIMNQIRALSDEYRALIDVPKKPTKSE*
Ga0070711_1006274141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MERIYDRLDQIRSLWKKLELTKPDTSEYEAIMQIRALSDEYRALIDVPKKPTKSE*
Ga0070730_1000037211	3300005537	Surface Soil	MERIYDILQRIQSLWKELEQTKPDSSEHVALMKQIRALSDEYRALIDVPKKPRESK*
Ga0070730_100517888	3300005537	Surface Soil	MERIYDRLDRIQQLWKKLELTKPNTSEYVEIMNQIRVLSEEYRALIDAPKKPKESK*
Ga0070730_100529492	3300005537	Surface Soil	MERIYDRLERIQQLWKKLELTKPNTSEYVEIMNQIRVLSEEYRALIDAPKKSTESK*
Ga0070730_100913004	3300005537	Surface Soil	MERIYDTLNRIQSLWKELERTKPDTSEYAALMNKIRVLSDEYSVLVDAPKKPRELKQELYVPD*
Ga0070730_102989842	3300005537	Surface Soil	MEKIYNILGRILQLWKKLELAKPNTREYVALMNEIRVLSEEYRALIEAPKEHRKST*
Ga0070730_104150911	3300005537	Surface Soil	MDRIYDILQRIGSMWKELERTKPDSSEYVVLLNQIRALSDEYMALIDAPKKPSKS*
Ga0070730_105733342	3300005537	Surface Soil	MERIYDRLDQIRSLWKKLELTKPDTSEYEAIMNQIRALSDEYRALIDVPKKPTKSE*
Ga0070763_105915861	3300005610	Soil	TGEGEDYHGAKMERIYDSLQRITQLWKKLELTKPNTSEYDAIMEQIRVLSEGYKALIDAPKNPVKSK*
Ga0075028_1004435372	3300006050	Watersheds	MALSENRAKMERIYDRLDRIKSLWKKLELTKPDTSEYNAIMNQIRALSDEYRALIDAPKKPTELK*
Ga0070715_105287953	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	WAKMERIYDRLDQIRSLWKKLELTKPDTSEYEAIMNQIRALSDEYRALIDVPKKPTKSE*
Ga0075014_1007174652	3300006174	Watersheds	MERIYEILQHIQSLWKELELTKPDSSEHAALMNQIRVLSDEYRALIDVPKK
Ga0070765_1006884781	3300006176	Soil	MERIYDRLQRITQLWKTLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPVKSK*
Ga0070765_1015449033	3300006176	Soil	GEDYHGAKMERIYDRLQRITQLWKTLELTKPNTSEYEAIMDQIRALSEEYKALIDAPKNPVKSK*
Ga0075436_1002393741	3300006914	Populus Rhizosphere	MERIYDRLDQIRSLWKKLELTKPGTSEYEAIMNQIRALSDEYRALIDVPKKPTKSE*
Ga0116218_15078061	3300009522	Peatlands Soil	MERIYDRLEHVLQLWKKLEITKPDTTEHNAIMKQIRILSDE
Ga0116219_105444762	3300009824	Peatlands Soil	MERIYDILEHILQLWKKLELTKPNTTEHAALMNQIRVLSEEYKALIDAPKKPKESK*
Ga0136449_1004127921	3300010379	Peatlands Soil	MERIYDRLEHVLQLWKKLEITKPDTTEHNAIMKQIRILSDEYKELI*
Ga0134126_111938512	3300010396	Terrestrial Soil	MERIYDILQRIQSLWKELEQTKPDSREHVVLMNQIRALSDEYRALIDVPKKPRESK*
Ga0150983_117405832	3300011120	Forest Soil	MERIYDTLQRIQSLWKELELTKPNTKEYDALFNQIRALSDEYVALIDVPKKPTQSK*
Ga0137363_100785412	3300012202	Vadose Zone Soil	MERIYDSLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKALIDTPKNPVKSN*
Ga0153915_100927251	3300012931	Freshwater Wetlands	MERIYDRLERIRQLWKKLELTKPNTSEYAALMNQIRVLSEEYRALIDAPKNPTESK*
Ga0153915_103190362	3300012931	Freshwater Wetlands	MERIYDRLEHILQLWKKLELTKPKTNEYAALMNQIRVLSEEYKALIDAPKKPRESK*
Ga0181532_100248502	3300014164	Bog	MERIYDRLQRIQQLWKELEQTKPNTSEYDALLNQIRVLSDEYRALIDAPKKPREAK*
Ga0182019_100069373	3300014498	Fen	MDRIFEKLQHIQSLWKELELTKPNTSEYVALMDQIRILSDEYWALINAPKKPRESK*
Ga0182019_100596012	3300014498	Fen	MERIYDHLERIRQLWKELEQANPNSREYDAIMKQIRVLSDEYNDLIDAPKKPSASE*
Ga0181505_108710592	3300016750	Peatland	MERIYDRLQRIQQLWKELEQTKPNTSEYDALLNQIRVLSDEYRALIDAPKKPREAK
Ga0187818_102283151	3300017823	Freshwater Sediment	MERIYDRLERIKSLWKELELTKPDTSEYDALLNQIRALSDEYRALIDAPKKPRESK
Ga0187821_105049442	3300017936	Freshwater Sediment	MERIYDRLDRIQQLWKKLELTKPNTSEYVEIMNQIRVLSEEYRALIDAPKKPKESK
Ga0187823_101031292	3300017993	Freshwater Sediment	MERIYDALNRIQSLWKELELTKPNTSEYDALLNQIRVLSDEYRALIDAPKKPRESK
Ga0187804_104606531	3300018006	Freshwater Sediment	MERIYDTLNRIQSLWKELELTKPNTSEYDALLNQIRVLSDEYRALIDVPKKPTESK
Ga0187805_101024883	3300018007	Freshwater Sediment	MERIYDRLERIKSLWKELELAKPDTSEYDALMNQIRVLSDEYKTLIDAPKKTRELK
Ga0210407_100023912	3300020579	Soil	MERIYDSLQRITQLWKKLELTKPNTNEYAAIMNQIRVLSKEYTALIDAPKNSQKAK
Ga0210407_100049101	3300020579	Soil	MLSIISPATHREEEMERIYDRLEHILQLWKKLELTKPDTTEHAALMKQIRILSDEYKDLIDVPKTPRESK
Ga0210407_100567206	3300020579	Soil	MERIYDSLQRITQLWKKLELTKPNTSEYEAIMDQIRVLSEEYKALIDAPKNPAKSK
Ga0210407_102002462	3300020579	Soil	MERTYDRLQQILQLWKKLELTKPYTSDYVALMNQIRVLSEEHRACIDAPKKLKESN
Ga0210407_102165751	3300020579	Soil	MERIFDSLQRITQLWKKLELTNPNTSEHDAIMDQIRVLSEEYKALIDAPKNPVKSK
Ga0210407_111308471	3300020579	Soil	MERIYDSLQRITQLWKKLEVTKPNTSEYAAIMNQIRVLSEEYSALIDAPKNP
Ga0210403_1000003882	3300020580	Soil	MERIYDTLQRIQSLWKKLERTKPDTSEYVALMNQIRASSNEYRALIDAPKKPGESK
Ga0210403_100403274	3300020580	Soil	MDRIYDILQRIQSLWKELELTKPDSSEYVVLLNQIRALSDEYMALIDAPKKPRKSQ
Ga0210403_101262532	3300020580	Soil	MERIYDSLQRITQLWKKLEVTKPNTSEYAAIMNQIRVLSEEYSALIDAPKNPVKSK
Ga0210403_103496821	3300020580	Soil	MERIYDTLQRIQSLWKELEVTKPNTGEYVALMNKIRVLSNGYMALVDVPKKPRESK
Ga0210403_106030001	3300020580	Soil	MERIYDRLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPAKSN
Ga0210403_114410281	3300020580	Soil	MERIYDTLRRIQSLWKELERTKADTSEHAALMNQIRALSEEYRALIDAPKKPTEPK
Ga0210399_100031855	3300020581	Soil	MERIYDSLLRITELWKKLEVTKPNTSEYAAIMNQIRVLSEEYNALIDAPKNPTKSK
Ga0210399_100053381	3300020581	Soil	MERIYDTLQRIQSLWKELERTKRDTSQHDALLNQIRVLSDEYVALIDVPKKPTESK
Ga0210399_100083247	3300020581	Soil	MERIYDSLQRIIQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPVKSN
Ga0210399_100378895	3300020581	Soil	MERIYDILQRIQSLWKELELKKPDSSEYVALLNEIRVLSDEYKALIDLPKKPRELR
Ga0210399_101761812	3300020581	Soil	MERIYDTLQRIQSLWKELEVTKQNTDEYVALMNQIRALSNEYMALVDIPKKPRESK
Ga0210399_102700592	3300020581	Soil	MERIYDSLQRITQLWKKLELTKPNTSEYAAIMNQIRVLSKEYTALIDAPKNSQKAK
Ga0210399_104144002	3300020581	Soil	MERIYDRLQRITQLWEKLELTKPNTTEYDAIMDQIRVLSNEYEALIDAPKNPIKSK
Ga0210399_104230922	3300020581	Soil	MERIYDTLQRIQSLWKELERTKPDTSEYVALMNQIRALSDEYSTLIDAPKKPRESKTRIVLA
Ga0210399_106955411	3300020581	Soil	QSHCQKTGTPANLETGEGEDYDGAKMERIYDSLQRITQLWKKLELTKPNTSEYEAIMDQIRVLSEEYKALIDAPKNPVKSK
Ga0210401_100190822	3300020583	Soil	MERIYDRLEHVLQLWRKLEITKPDTTEHNAIMKQIRILSDEYKELI
Ga0210401_100926464	3300020583	Soil	MEKIYDTLQRIQSLWKELERTKPDTSEHVALMNQIRALSDEYRALIDAPKKPRESKQELCLPD
Ga0210401_101332395	3300020583	Soil	DRLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPAKSN
Ga0210401_101733963	3300020583	Soil	MERIYDRLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKGLIDAPKNPVKSNEV
Ga0210401_105958831	3300020583	Soil	MERIYDSLQRITQLWKKLELTKPNTSEYEAIMDQIRVLSEEYKALIDAPKNP
Ga0210401_107796841	3300020583	Soil	GEKMERIYDTLQRIQSLWIELERTKPGTSEYVALMDQIRSSSDEYRALIDAPKMPRESKQELYVPD
Ga0210401_113302341	3300020583	Soil	MERIYDILQRITSLWKELELTTPGSSEYFALLNQIRVLSGEYVALIDAPKKPRKPR
Ga0210404_102955742	3300021088	Soil	MERIFDSLQRITQLWKKLALTKPDTDEYAALMDEIRIRSEEYKALIDAPKNPVKSK
Ga0210404_103363592	3300021088	Soil	MERIYDSLRRITQLWKKLELTKPNTRRYDAIMDQIRVLSEEYEALIDAPQNTAKSK
Ga0210406_1000567517	3300021168	Soil	MERIYDRLERILQLWKKLELTKPNSSEYVELMNVIRVLSEEYKALIDAPKKPKESNQITDPPKVHFVFNS
Ga0210406_101288451	3300021168	Soil	MERIYDSLQRITQLWKKLELTKPNTSEYEAIMDQIRVLSEEYKALIDAPKNPVKSK
Ga0210406_103114482	3300021168	Soil	GEGKDYHGAKMERIYDSLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYTALIDAPKNPAKSK
Ga0210406_104762751	3300021168	Soil	LQRITLLWKELELTKSGSSEYVALLNQIRVLSGEYEALIDAPKKPSKPP
Ga0210405_100953862	3300021171	Soil	MERIFDSLQRITQLWKKLALTKPDTDEYAALMDEIRIRSEEYKALIDAPNNPVKSK
Ga0210405_103081201	3300021171	Soil	MERIYDVLQRIKSLWKELELTKPNTSEYDALLNQIRVLSDEYVALIDVPKKPTESK
Ga0210396_101839102	3300021180	Soil	MGTPANLETGEGEDYHGAKMERIYDSLRRITQLWKKLELTKPNTRRYDAIMDQIRVLSEEYEALIDAPQNTAKSK
Ga0210396_107495191	3300021180	Soil	MERIYDSLLCITELWKKLEVTKPNTSEYAAIMNQIRVLSEEYNALIDAP
Ga0210387_108680571	3300021405	Soil	GEDYDGAKMERIYDSLQRITQLWKKLELTKPNTNEYTAIMNQIRVLSKEYTALIDAPKNSQKAK
Ga0210387_115650652	3300021405	Soil	VLREGAEMERIYDRLEHIRQLWKKLELTKPDTTEYAALISQIRVLSNEYMALIDAPKKPLESKVSH
Ga0210383_106115992	3300021407	Soil	MERIYDRLEHVLQLWKKLEITKPDTTEHNAIMNQIRILSDEYKELI
Ga0210394_100508621	3300021420	Soil	MERIYDRLEHVLQLWKKLEITKPDTTEHNAIMKQIRILSDEYKELI
Ga0210384_100247657	3300021432	Soil	MERIYDRLQRITQLWKTLELTKPNTSEYEAIMDQIRVLSEEYKALIDAPKNPVKSK
Ga0210384_100439756	3300021432	Soil	MERIYDRLQRITQLWKKLELTKSNTSEYDAIMDQIRVLSEEYKALIDAPKNPAKSN
Ga0210390_105197411	3300021474	Soil	MERIYDSLLCITELWKKLEVTKPNTSEYAAIMNQIRVLSEEYNALIDAPKNPTKSKCAF
Ga0210402_1000354711	3300021478	Soil	MERIYDSLQRITQLWKKLELTKPNTNEYTAIMNQIRVLSKEYTALIDAPKNSQKAK
Ga0210402_1004155610	3300021478	Soil	MERIYDILERIQSLWKELEVTKPNSSDYVAVLNQIRVLSDEYVALIDVPKRPTEPK
Ga0210402_101080892	3300021478	Soil	MERIYDILQRIQSLWKELELTKPDSIEHLELMKQIRVLSDEYVALIDVPKKRTESK
Ga0210410_100034713	3300021479	Soil	MERIYDRLQRITQLWKTLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPVKSK
Ga0210410_100120366	3300021479	Soil	MERIYDTLRRIQSLWKELELTKPDTSEYDALLNQIRVLSDEYRALIDVPKKPTESK
Ga0210409_112625341	3300021559	Soil	MERIYDILQRITSLWKALELTKPGSSEYDAIMEQIHVLSEEYTALIDAPKNPVKS
Ga0222728_10865852	3300022508	Soil	MERIYDILQRITSLWKELELTKPDSSEYVALLNQIRVLSDEYQALIDAPK
Ga0242668_11585512	3300022529	Soil	MERVYDLLQRITLLWKELELTKSGSSEYVALLNQIRVLSGEYEALIDAPKKPSKPP
Ga0247694_100014015	3300024178	Soil	MERIYDRLERIRQLWKKLEVTKPNTNEYAAIMNQIRVLSEEYRALIEAPKKLKE
Ga0247695_10111281	3300024179	Soil	MERIYDRLDQIRSLWKKLELTKPGTSEYEAIMNQIRALSDEYRALIDVPKKPTKSE
Ga0247669_10087562	3300024182	Soil	MERIYDTLQRIQSLWKELERTKPDTSEYVALMNQIRALSDEYSALIDAPKKPRESKTRIVLA
Ga0247669_10255672	3300024182	Soil	MERIYDILERILQLWKKLELVKPGTREYLALMNQIRVLSEEYSALIEVPKKPRESK
Ga0247667_10094842	3300024290	Soil	MERIYDRLNRIQQLWKKLELTKPNTSEYVEIMNQIRVLSEEYRALIDAPKKPKESK
Ga0247667_10385742	3300024290	Soil	MERIYDRLERIRQLWKKLEVTKPNTNEYAAIMNQIRVLSEEYSALIEVPKKPRESK
Ga0247666_10031111	3300024323	Soil	MERIYDRLDQIRSLWKKLELTKPDTSEYEAIMNQIRALSDEYRALINVPKKPTKSE
Ga0247666_11269761	3300024323	Soil	MERIYDTLQRIQSLWKELERTKPDTSEYVALMNQIRALSDEYRALIDAPKKPRESGQELYSPS
Ga0247668_10990212	3300024331	Soil	HRGAEMERIYDTLQRIQSLWKELERTKPDSSEYVALMNQIRVLSDDYRALIDAPKKPRESKTRIVLA
Ga0207700_100600724	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MERIYDRLDRIRSLWKKLELTKPDTSEYEAIMNQIRALSDEYRALIDVPKKP
Ga0209220_10591582	3300027587	Forest Soil	MERIYDRLERILQLWKKLELTKPNTSEYVALMNQIRVLSEEYTALIDAPKKPRESN
Ga0209736_100007029	3300027660	Forest Soil	MEGIYDRLQRILQLWKKLELTKPNTSEYVALMNQIRVLSEEYRERIEAHKSPKTN
Ga0209118_10149045	3300027674	Forest Soil	MERIYDRLEHIKSLWKELELTKPDTSEYNALLNQIRALSEEYRALIDVPKKPRESK
Ga0209118_10989452	3300027674	Forest Soil	MEGIYDRLQRILQLWKKLELTKPNTSEYVALMNQIRVLSEEYRARIDAPKKAKESN
Ga0209074_104697882	3300027787	Agricultural Soil	MERIYNTLQRIQSLWKELERTKPDTSEYVALMKQIRALSDEYTALIDAPKKPRKSKQELSLPDKRDYSCN
Ga0209139_101992212	3300027795	Bog Forest Soil	MERIYDTLQRIQSLWKELEQKKPDSSEYVALMNQIRALSDDYRALIDAPKKPRESK
Ga0209580_103736762	3300027842	Surface Soil	MEKIYNILGRILQLWKKLELTKPNTSEYVALMNQIRALSEEYRALIDAPKKPTESK
Ga0209166_1000027051	3300027857	Surface Soil	MERIYDILQRIQSLWKELEQTKPDSSEHVALMKQIRALSDEYRALIDVPKKPRESK
Ga0209166_100015043	3300027857	Surface Soil	MERIYDRLEHILQLWKKLELTKPNTSEHAELMKQIRALSEEYRALIDAPKKPRESK
Ga0209166_100082016	3300027857	Surface Soil	MERIYDRLERIQQLWKKLELTKPNTSEYVEIMNQIRVLSEEYRALIDAPKKSTESK
Ga0209166_102571731	3300027857	Surface Soil	MDRIYDILQRIGSMWKELERTKPDSSEYVVLLNQIRALSDEYMALIDAPKKPSKS
Ga0209380_100426242	3300027889	Soil	MERIYDRLQRITQLWKTLELTKPNTSEYEAIMDQIRALSEEYKALIDAPKNPVKSK
Ga0209526_100266353	3300028047	Forest Soil	MERIFDSLQRITQLWKKLALTKPNTSEYAALMDEIRILSEEYRALIEVPKNSQKSK
Ga0222749_103090691	3300029636	Soil	ANLETGEGEDYHGAKMERIYDRLQRITQLWKKLELTKPNTSEYDAIMDQIRVLSEEYKALIDAPKNPAKSN
Ga0075377_117575661	3300030844	Soil	MERIYDILQRIQSLWKELEVTKLNSSEYVALLNQIRVLSDERVALIDVPKKPTEPK
Ga0170824_1026958353	3300031231	Forest Soil	MERIYDRLEHILQLWKTLELTKPNTTEHTALMNQIRVLSDEYRALIDSPKKPRKSK
Ga0170824_1253717474	3300031231	Forest Soil	MERIYDILQRIQSLWKELEVTKLNSSEYVALLNQIRVLSDEYVALIDVPKKPTEPK
Ga0170820_112654182	3300031446	Forest Soil	MERIYDILQRIQSLWKELEVTKLNSSEYVALLNQIRVLSDEYAALIDVPKKPTEPK
Ga0310686_1152070579	3300031708	Soil	MERIYDRLEHVLQLWRKLEITKPDTTEHNAIMKQIRILSDEYKELV
Ga0307469_101992852	3300031720	Hardwood Forest Soil	MERLYESLRRITELWKKLELTKPNTSEYEALMDKIHILTEEYWALIDARKNPERSK
Ga0307469_121397851	3300031720	Hardwood Forest Soil	EMERTYDRLQQILQLWKKLELTKPYTSDYVALMNQIRVLSEEHRACIDAPKKLKESN
Ga0307469_123797441	3300031720	Hardwood Forest Soil	MERIFDRLERILQLWKKLKQTKPNTSEYVALMNQIRALSEECGAYTDAFNDPNESNQVTD
Ga0307477_100896932	3300031753	Hardwood Forest Soil	MERISDRLERILQLWKKLKQTKPNTSEYVALMNQIRALSEECGAYTDAFNDPNESNQVTDPSEVH
Ga0307475_100725192	3300031754	Hardwood Forest Soil	MERIFDRLERILQLWKKLKQTKPNTSEYVALMNQIRALSEECGAYTDAFNDPNESNQVTDPSEVH
Ga0307479_100751894	3300031962	Hardwood Forest Soil	MERTYDGLQQILQLWKELELTKPYTSEYVALMNQIRVLSEEYRACIDAPKKLKESN
Ga0307479_104418801	3300031962	Hardwood Forest Soil	MERIYDTLQRIQSLWKELEGTKPDTSESVALMNQIRALSDEYRALIDAPKKPRESKQELYLPNAAADKVASAKK
Ga0311301_101569415	3300032160	Peatlands Soil	MERIYDILEHILQLWKKLELTKPNTTEHAALMNQIRVLSEEYKALIDAPKKPKESK
Ga0307471_1015761441	3300032180	Hardwood Forest Soil	MERISDRLQRILQLWKKLKLTKPNTREYVALMNQIRALSEEYEARIDAFNNPNGSNQVTDPSEVH
Ga0326728_100220963	3300033402	Peat Soil	MERIYDRLERILQLWKKLELTKPNTSEYVALMNQIRVLSEEYRALIEAPKKPRESR
Ga0326728_101242034	3300033402	Peat Soil	MERIYEALEHIKSLWKELELTKPDTIEYDALMNQIRVLSDEYRALIDAPKKPRESK
Ga0326727_100772245	3300033405	Peat Soil	MERIYDRLEHILQLWKKLELTRPNSTEYATIMNQIRILSDEYKALIDAPKKPRGSK
Ga0316620_120146752	3300033480	Soil	MERIYDRLERIRQLWKKLELTKPNTSDYAALMNQIRVLSEEYRALIDAPKNPTESK
Ga0316624_100522444	3300033486	Soil	MERIYDRLERIRQLWKKLELTKPNTSEYAALMNQIRVLSEEYRALIDAPKKPTESK
Ga0316628_1016448002	3300033513	Soil	GAEMERIYDRLERIRQLWKKLELTKPNTSEYAALMNQIRVLSEEYRALIDAPKNPTESK
Ga0316628_1035891071	3300033513	Soil	MERIYDTLERIRQLWKKLELTKPNTSEYAALMNQIRVLSEEYRALIDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053586

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences