Metagenome / Metatranscriptome Family F053656

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053656
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	81 residues
Representative Sequence	MRTAARATQSFSLDREILAEVKRTRGTLSQSERVNRLLRLALDLERRAALDRESASFYASAPADRTERRAFESASMASLARD
Number of Associated Samples	116
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.41 %
% of genes near scaffold ends (potentially truncated)	29.79 %
% of genes from short scaffolds (< 2000 bps)	78.01 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.688 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.312 % of family members)
Environment Ontology (ENVO)	Unclassified (41.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.82% β-sheet: 0.00% Coil/Unstructured: 48.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02452	PemK_toxin	48.94
PF00854	PTR2	3.55
PF00156	Pribosyltran	2.13
PF01261	AP_endonuc_2	2.13
PF13537	GATase_7	2.13
PF08032	SpoU_sub_bind	1.42
PF13439	Glyco_transf_4	1.42
PF12704	MacB_PCD	1.42
PF02769	AIRS_C	1.42
PF00072	Response_reg	0.71
PF04255	DUF433	0.71
PF13527	Acetyltransf_9	0.71
PF06210	DUF1003	0.71
PF03309	Pan_kinase	0.71
PF04357	TamB	0.71
PF12344	UvrB	0.71
PF06736	TMEM175	0.71
PF00534	Glycos_transf_1	0.71
PF00583	Acetyltransf_1	0.71
PF12796	Ank_2	0.71
PF00535	Glycos_transf_2	0.71
PF13507	GATase_5	0.71
PF12848	ABC_tran_Xtn	0.71
PF01075	Glyco_transf_9	0.71
PF07969	Amidohydro_3	0.71
PF02811	PHP	0.71
PF07589	PEP-CTERM	0.71
PF11663	Toxin_YhaV	0.71
PF00348	polyprenyl_synt	0.71
PF13242	Hydrolase_like	0.71
PF03787	RAMPs	0.71
PF07927	HicA_toxin	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	48.94
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	3.55
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.42
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.71
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1332	CRISPR-Cas system type III CSM-effector complex subunit Csm5, RAMP superfamily Cas7 group	Defense mechanisms [V]	0.71
COG1336	CRISPR-Cas system type III CMR-effector complex subunit Cmr4, RAMP superfamily Cas7 group	Defense mechanisms [V]	0.71
COG1337	CRISPR-Cas system type III CSM-effector complex subunit Csm3, RAMP superfamily Cas7 group	Defense mechanisms [V]	0.71
COG1367	CRISPR-Cas system type III CMR-effector complex subunit Cmr1, RAMP superfamily Cas7 group	Defense mechanisms [V]	0.71
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	0.71
COG1567	CRISPR-Cas system type III CSM-effector complex subunit Csm4, RAMP superfamily Cas5 group	Defense mechanisms [V]	0.71
COG1604	CRISPR/Cas system CMR subunit Cmr6, Cas7 group, RAMP superfamily	Defense mechanisms [V]	0.71
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.71
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.71
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.71
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.81 %
Unclassified	root	N/A	16.31 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.64 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.42 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	8.51 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	8.51 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.42 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.71 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.71 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	7.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.42 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.71 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.71 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.42 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.71 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.71 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.31 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.42 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.71 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.71 %
Streptomyces flavidovirens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces flavidovirens	0.71 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig202388	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300000567\|JGI12270J11330_10103732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	1228	Open in IMG/M
3300001385\|JGI20193J14888_1038798	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300002538\|JGI24132J36420_10139196	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300002550\|JGI24131J36419_10141239	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300004092\|Ga0062389_104890211	Not Available	505	Open in IMG/M
3300004631\|Ga0058899_10552409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces flavidovirens	540	Open in IMG/M
3300004631\|Ga0058899_11617004	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300004635\|Ga0062388_101490910	Not Available	683	Open in IMG/M
3300005338\|Ga0068868_102054378	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300005365\|Ga0070688_100551453	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	876	Open in IMG/M
3300005445\|Ga0070708_101788441	Not Available	570	Open in IMG/M
3300005537\|Ga0070730_10016586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5840	Open in IMG/M
3300005538\|Ga0070731_10403950	Not Available	908	Open in IMG/M
3300005541\|Ga0070733_10662170	Not Available	701	Open in IMG/M
3300005542\|Ga0070732_10018740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3882	Open in IMG/M
3300005542\|Ga0070732_10690842	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005542\|Ga0070732_10924448	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005591\|Ga0070761_10001858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13176	Open in IMG/M
3300005644\|Ga0075036_1793665	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300005650\|Ga0075038_10180676	Not Available	1228	Open in IMG/M
3300005944\|Ga0066788_10004386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2815	Open in IMG/M
3300005949\|Ga0066791_10011887	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300005993\|Ga0080027_10157206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	875	Open in IMG/M
3300005995\|Ga0066790_10226745	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300006949\|Ga0075528_10001922	All Organisms → cellular organisms → Bacteria	4466	Open in IMG/M
3300006950\|Ga0075524_10311407	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	690	Open in IMG/M
3300009090\|Ga0099827_10319123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300009143\|Ga0099792_11199071	Not Available	515	Open in IMG/M
3300009148\|Ga0105243_11405370	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300009522\|Ga0116218_1283301	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300009552\|Ga0116138_1092751	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300009623\|Ga0116133_1032447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300009640\|Ga0116126_1021015	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300009644\|Ga0116121_1140227	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	763	Open in IMG/M
3300009660\|Ga0105854_1040873	All Organisms → cellular organisms → Bacteria → Acidobacteria	1431	Open in IMG/M
3300009661\|Ga0105858_1231483	Not Available	555	Open in IMG/M
3300009698\|Ga0116216_10291599	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300010044\|Ga0126310_11378354	Not Available	573	Open in IMG/M
3300010048\|Ga0126373_11381195	Not Available	770	Open in IMG/M
3300010376\|Ga0126381_100385680	All Organisms → cellular organisms → Bacteria → Acidobacteria	1947	Open in IMG/M
3300010379\|Ga0136449_101977904	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300011120\|Ga0150983_10789631	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300011120\|Ga0150983_10874906	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300011120\|Ga0150983_12103810	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300011120\|Ga0150983_16084263	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300012210\|Ga0137378_10532693	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012212\|Ga0150985_119036917	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300012354\|Ga0137366_10389200	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300013308\|Ga0157375_10935584	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300014151\|Ga0181539_1082540	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300014152\|Ga0181533_1015246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5365	Open in IMG/M
3300014155\|Ga0181524_10016264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5671	Open in IMG/M
3300014158\|Ga0181521_10356778	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300014159\|Ga0181530_10445557	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300014160\|Ga0181517_10005283	All Organisms → cellular organisms → Bacteria	11464	Open in IMG/M
3300014161\|Ga0181529_10192210	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300014161\|Ga0181529_10284793	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300014161\|Ga0181529_10427058	Not Available	712	Open in IMG/M
3300014161\|Ga0181529_10722757	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300014165\|Ga0181523_10468419	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300014199\|Ga0181535_10815035	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300014200\|Ga0181526_10650237	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300014490\|Ga0182010_10152655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300014491\|Ga0182014_10001948	All Organisms → cellular organisms → Bacteria	26755	Open in IMG/M
3300014491\|Ga0182014_10103746	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300014495\|Ga0182015_10213117	All Organisms → cellular organisms → Bacteria → Acidobacteria	1287	Open in IMG/M
3300014501\|Ga0182024_10290807	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300014501\|Ga0182024_10361310	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300014501\|Ga0182024_11676537	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300014839\|Ga0182027_11735572	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300014969\|Ga0157376_10814767	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300016702\|Ga0181511_1320010	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300016750\|Ga0181505_10348265	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300016750\|Ga0181505_11043526	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300017925\|Ga0187856_1011755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4961	Open in IMG/M
3300017934\|Ga0187803_10082062	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300017934\|Ga0187803_10089856	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300017935\|Ga0187848_10008107	All Organisms → cellular organisms → Bacteria	6436	Open in IMG/M
3300017938\|Ga0187854_10378642	Not Available	595	Open in IMG/M
3300017946\|Ga0187879_10059979	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300017946\|Ga0187879_10112484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1556	Open in IMG/M
3300017946\|Ga0187879_10384421	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300017970\|Ga0187783_10137981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1797	Open in IMG/M
3300017988\|Ga0181520_10020767	All Organisms → cellular organisms → Bacteria	7502	Open in IMG/M
3300017988\|Ga0181520_10133819	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300018019\|Ga0187874_10077700	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018025\|Ga0187885_10343310	Not Available	672	Open in IMG/M
3300018030\|Ga0187869_10147574	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300018030\|Ga0187869_10270971	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018033\|Ga0187867_10018033	All Organisms → cellular organisms → Bacteria	4627	Open in IMG/M
3300018034\|Ga0187863_10589116	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300018035\|Ga0187875_10699056	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300018037\|Ga0187883_10096986	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300018037\|Ga0187883_10231818	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300018043\|Ga0187887_10769765	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300018044\|Ga0187890_10726185	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300018057\|Ga0187858_10649296	Not Available	633	Open in IMG/M
3300018088\|Ga0187771_11367823	Not Available	600	Open in IMG/M
3300019260\|Ga0181506_1116197	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300019270\|Ga0181512_1594884	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300021171\|Ga0210405_10055625	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300021171\|Ga0210405_10586343	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300021178\|Ga0210408_11272353	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300021432\|Ga0210384_10689139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	915	Open in IMG/M
3300021477\|Ga0210398_10122467	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300021478\|Ga0210402_10708161	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	930	Open in IMG/M
3300021559\|Ga0210409_10709002	Not Available	877	Open in IMG/M
3300025324\|Ga0209640_10456049	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300025481\|Ga0208079_1007952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4123	Open in IMG/M
3300025650\|Ga0209385_1040631	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300025878\|Ga0209584_10022258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2152	Open in IMG/M
3300025934\|Ga0207686_10371475	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300026023\|Ga0207677_11971187	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300026215\|Ga0209849_1001670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3882	Open in IMG/M
3300026215\|Ga0209849_1061137	Not Available	661	Open in IMG/M
3300026216\|Ga0209903_1001151	All Organisms → cellular organisms → Bacteria → Acidobacteria	7586	Open in IMG/M
3300026221\|Ga0209848_1019815	Not Available	1315	Open in IMG/M
3300027676\|Ga0209333_1001385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	11890	Open in IMG/M
3300027842\|Ga0209580_10654155	Not Available	520	Open in IMG/M
3300027853\|Ga0209274_10003154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7971	Open in IMG/M
3300027854\|Ga0209517_10063106	All Organisms → cellular organisms → Bacteria	2686	Open in IMG/M
3300027857\|Ga0209166_10120269	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300027867\|Ga0209167_10530437	Not Available	645	Open in IMG/M
3300027869\|Ga0209579_10398325	Not Available	746	Open in IMG/M
3300031234\|Ga0302325_10080461	All Organisms → cellular organisms → Bacteria → Acidobacteria	6234	Open in IMG/M
3300031234\|Ga0302325_10619916	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300031236\|Ga0302324_100235915	All Organisms → cellular organisms → Bacteria	2873	Open in IMG/M
3300031708\|Ga0310686_106875335	Not Available	533	Open in IMG/M
3300031718\|Ga0307474_11447439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	541	Open in IMG/M
3300031753\|Ga0307477_10585289	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300032160\|Ga0311301_10351140	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300032160\|Ga0311301_11499230	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300032163\|Ga0315281_11694927	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300032205\|Ga0307472_100280583	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300032205\|Ga0307472_100333936	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300032205\|Ga0307472_101572456	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300032805\|Ga0335078_10027718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8405	Open in IMG/M
3300033402\|Ga0326728_10042435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7021	Open in IMG/M
3300033888\|Ga0334792_055441	Not Available	1215	Open in IMG/M
3300034125\|Ga0370484_0035268	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1205	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.04%
Host-Associated	Host-Associated	4.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.70%
Aquatic	Environmental → Aquatic	33.33%
Plants	Host-Associated → Plants	4.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.16%
Freshwater	Environmental → Aquatic → Freshwater	33.33%
Peat	Environmental → Terrestrial → Peat	3.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.13%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.02%
Loam	Environmental → Terrestrial → Soil → Loam	8.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Lake	Environmental → Aquatic → Freshwater → Lake	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	28.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.71%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.09%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.55%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.13%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.13%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.42%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.71%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.71%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005644	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_02236470	2140918008	Soil	MRTAIKRTKTFSLDEEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL
JGI12270J11330_101037323	3300000567	Peatlands Soil	MPAIKATRTFSLDKEILAKVKRTRGSLSESERVNRLLRFALDQEKRAALASEIAGFFASHREDRAERRAFESASRESWTRE*
JGI20193J14888_10387982	3300001385	Arctic Peat Soil	SFLVGLLVGMRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL*
JGI24132J36420_101391962	3300002538	Arctic Peat Soil	MRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL*
JGI24131J36419_101412391	3300002550	Arctic Peat Soil	LDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL*
Ga0062389_1048902111	3300004092	Bog Forest Soil	MGILTTMPTATRATRTFSVDKEILAEVKRTRGDLSESERVNQLLRFALDLEKRTALEPEIAGFFAVDREDRAERRAFESASRSSWARE*
Ga0058899_105524091	3300004631	Forest Soil	KINRSFSLDPDVLAEVKRTRGTLSESERVNRLLRDSLAREKRAALEREIADFFKSNPDDREEARAFQSAGIASLARD*
Ga0058899_116170041	3300004631	Forest Soil	AIKATRTFSLDKEILFEVKRTKGGLSESERVNRLLRTALDLENRAALEREIASFFDANREDRVERRAFESASRASWERE*
Ga0062388_1014909101	3300004635	Bog Forest Soil	MPTATRATRTFSVDKEILAEVKRTRGDLSESERVNQLLRFALDLEKRTALEPEIAGFFAVDREDRAERRAFESASRSSWARE*
Ga0068868_1020543781	3300005338	Miscanthus Rhizosphere	MRAAIKRTKTFSLDEEILAEVKKTKGPQSESQRVNSLLRFALDLEKRAALDREIAGFFEDALPARDERRAFESAAIASWKRDECL*
Ga0070688_1005514531	3300005365	Switchgrass Rhizosphere	MRIAIKRTKTFSLDEDILAEVKRTKGPQSESQRVNSLLRFALDLERRAALDREIAGFFEDAPLARDERRAFESAAIASWTRDECL*
Ga0070708_1017884412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSATRTTRTFSLDREVLSELRRTKGNLSESERVNRLLRFALDLEKRAAIDREIANFFASAPASRAERRAFESASVSSWKRE*
Ga0070730_100165862	3300005537	Surface Soil	MRTATRDTRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFATAPDHPAERRAFESAAVASWTRH*
Ga0070731_104039502	3300005538	Surface Soil	MRIATRDTRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFGSAGDHRAERRAFESAAVASWTRD*
Ga0070733_106621702	3300005541	Surface Soil	MRIATRDTRTFSLDRKILAEVKRTKGGLSESERVNRLLRRALDLERRAALDAEAASFFASVRGDQKERRAFEYAAVASWTRH*
Ga0070732_100187406	3300005542	Surface Soil	MRTATRDIRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFASARGDRKERRAFESAAVASWTRH*
Ga0070732_106908421	3300005542	Surface Soil	MRIATRDTRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFGSAGGHRAERRAFEFAAVASWTRD*
Ga0070732_109244482	3300005542	Surface Soil	MPLPTRETKTFSLDRTILAEVKRTKGALSESERVNRLLRRALDLERRVALDAEAASFFSSAPGDRAERRAFESAAVASWTRD*
Ga0070761_100018583	3300005591	Soil	MRTATRATQSFSLDREILAEVKRTRGTLSQSERVNRLLRFALDLERRATLERETASFYGDAPADRTERRAFESATIESLARD*
Ga0075036_17936652	3300005644	Permafrost Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRGFQSKTLAAWARND*
Ga0075038_101806762	3300005650	Permafrost Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQER
Ga0066788_100043862	3300005944	Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRAFQSKTLAAWARND*
Ga0066791_100118872	3300005949	Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERSAFQSKTLAAWARND*
Ga0080027_101572063	3300005993	Prmafrost Soil	SLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRAFQSKTLAAWARND*
Ga0066790_102267452	3300005995	Soil	VAQAVRLRLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRGFQSKTLAAWARND*
Ga0075528_100019229	3300006949	Arctic Peat Soil	PILLQSFLVGLLVGMRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL*
Ga0075524_103114071	3300006950	Arctic Peat Soil	MRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEPRAFESAAIASWTRDECL*
Ga0099827_103191233	3300009090	Vadose Zone Soil	MRFATRETKTFSLDRKILAEVKRTKGTLSESERVNRLLRRALDLERRAALDAEAASFFGSACDDRAERRAFESAAVASWARD*
Ga0099792_111990712	3300009143	Vadose Zone Soil	MRLATRETRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFNSAPNHRAEARAFESASVASWTRD*
Ga0105243_114053701	3300009148	Miscanthus Rhizosphere	MSAAKTTRTFSLDREILSRVKRTKGSSSESKRVNDLLRLALDLEQQAALEQEIAGFFGSAPAGRDERRAFQSATLASWARD*
Ga0116218_12833011	3300009522	Peatlands Soil	LDREILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAAGDRIERRAFESATIESLARD*
Ga0116138_10927512	3300009552	Peatland	MRTASRRTRSFSLDHEILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPTNRTERRAFESATIESLARD*
Ga0116133_10324472	3300009623	Peatland	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALDPERRAALERESADFYASSPADRTERRAFESATIESLARD*
Ga0116126_10210155	3300009640	Peatland	MFSIMNANSGATVRATKTFSLDKEVLAEVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAEAPADRADRRAFQSASLKSWARDGCR*
Ga0116121_11402272	3300009644	Peatland	MGKPLKATRTFSLDKEILVEVKRTKRDLSESERVNRLLRLALALERQAALEREISSFFADARDDRAERRAFESASIAAWGRN*
Ga0105854_10408735	3300009660	Permafrost Soil	ILVGMRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALYRESAGFFRSAPADRQERRAFQSKTLAAWARND*
Ga0105858_12314832	3300009661	Permafrost Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRAFQSKTLAAWA
Ga0116216_102915991	3300009698	Peatlands Soil	MRTTARATQSFSLDREILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAAGDRIERRAFESATIESLARD*
Ga0126310_113783542	3300010044	Serpentine Soil	MAVAIKATKTFSLDKSVLAEIKRTKGRLSESERVNRLLRSALELEKRAAFEQEAADFYATARDDREERRAFESAGLDVWKHD*
Ga0126373_113811952	3300010048	Tropical Forest Soil	MRTASKATRTFSLDKGILAELKRTTGDLSESQRVNRLLHVALDLEKRALLEQEIADFFAADQSDRKERRAFEAASL
Ga0126381_1003856801	3300010376	Tropical Forest Soil	MPAKVNKTFSLDPDVLAAVKRTKGNGSESERVNTLLRRALELEERAALSDEAAAFFASAPKDREERRAFQSAGIASWTRK*
Ga0136449_1019779041	3300010379	Peatlands Soil	KEILVEVKRTKGDLSESERVNRLLRFALDLEKRAALEREIAGFFSANREDRAERRAFESRSRASWARE*
Ga0150983_107896311	3300011120	Forest Soil	TSKATKTFSLDKDILQEVKRTKGDLSESARVNRLLRLALDLERRAALDQEAANFFRSAPGDRKERSAYETASLAAWTRD*
Ga0150983_108749061	3300011120	Forest Soil	IMRTATKINRSFSLDPDVLAEVKRTRGTLSESERVNRLLRDSLAREKRAALEREIADFFKSNPDDREEARAFQSAGIASLARD*
Ga0150983_121038102	3300011120	Forest Soil	GILLAMRRAIKATRTFSLDKEILFEVKRTKGGLSESERVNRLLRTALDLENRAALEREIASFFDANREDRVERRAFESASRASWERE*
Ga0150983_160842632	3300011120	Forest Soil	LIAMRTAIKATRTFSLDKEILVEVKRTKGDLSESERVNRLLRTALDLGRRAALEREVAGFFSANREDRAERRAFETASRTSWGRE*
Ga0137378_105326933	3300012210	Vadose Zone Soil	MAMRTATKATKTYSVDREILAEVKRTRGNLSESERVNRLLRFALYQEKRAALEREIAGFFAENREDRAERRAFESASRESWTRE*
Ga0150985_1190369171	3300012212	Avena Fatua Rhizosphere	MRIGIKRTKTFSLDEEILAEVKRTKGTQSESQRVNSLLRFALDLERRAALDREVAGFFEDAPAARDERRAFESAAIGSWTRDECL*
Ga0137366_103892002	3300012354	Vadose Zone Soil	MKATKTFSLDEEILAEVKRTKGNRSESERVNGLLRFALDLERRAALDREIASFFEQAPAERDERLAFESAGLVSWARD*
Ga0157375_109355843	3300013308	Miscanthus Rhizosphere	MRTAIKRTKTFSLDEEILAEVKRTKGPQSESQRVNSLLRFALDLERRAALDREIAGFFEDAPLARDERRAFESAAIASWTRDECL*
Ga0181539_10825402	3300014151	Bog	MAAVRTTRTFSLDKEILAQVKRTKGDLSESERVNRLLRLALDLEKQAALEREIAGFFAAAPANRAERRAFESASLKPWARD*
Ga0181533_10152468	3300014152	Bog	ATMFSIMNANSGATVRATKTFSLDKEVLAEVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAEAPADRADRRAFQSASLKSWARDGCR*
Ga0181524_100162646	3300014155	Bog	MFSIMNANSGATVRATKTFSLDKEVLAEVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAEAPADRADRRAFQSASLKSWARD*
Ga0181521_103567781	3300014158	Bog	KEVLAEVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAEAPADRADRRAFQSASLKSWARD*
Ga0181530_104455572	3300014159	Bog	MRTAARATQSFSLDREILAEVKRTRGTLSQSERVNRLLRLALDLERRAALDRESASFYASAPADRTERRAFESASMASLARD*
Ga0181517_100052834	3300014160	Bog	MGKALKATRTFSLDKEILVEVKRTKRDLSESERVNRLLRLALALERQAALEREISSFFADARDDRAERRAFESASIAAWGRN*
Ga0181529_101922102	3300014161	Bog	MGALRTTRTFSLDKEILAQVKRTKGGLSESERVNRLLRLALDLEKQAALEREIAGFFAAAPASRAERRAFESASLKSWARR*
Ga0181529_102847931	3300014161	Bog	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALESERRAALERESATFYASSRADRTERRAFESATIESLARD*
Ga0181529_104270581	3300014161	Bog	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALDPERRAALERESADFYASSPADRTERRAF
Ga0181529_107227571	3300014161	Bog	MNANSEPRGKATKTFSLDREVLAQVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAAAPDDRAARRAFQSASLKSLARD*
Ga0181523_104684192	3300014165	Bog	MDREILAEIRRTRGALSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD*
Ga0181535_108150352	3300014199	Bog	RTTRTFSLDKEILAQVKRTKGGLSESERVNRLLRLALDLEKQGALEREIAGFFAAAPASRAERRAFESASLKSWARR*
Ga0181526_106502372	3300014200	Bog	MDREILAEIQRTRGALSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD*
Ga0182010_101526553	3300014490	Fen	TFSLDEEILAAVKRTKGTQSESERVNSLLRFALDLEQRVALDREIAKFFDDADPTRDERRAFESAAIASWTREE*
Ga0182014_100019483	3300014491	Bog	MRTAARAPHSFSLDREILAEIKRTRGALSQNERANRLLRLALDSERRAALERESANFDASSPADRTERRAFECAAMESLARD*
Ga0182014_101037462	3300014491	Bog	MGAVRTTRTFSLDKEILAQVKRTKGGLSESERVNRLLRLALDLEKQGALEREIAGFFAAAPASRAERRAFESASLKSWARR*
Ga0182015_102131173	3300014495	Palsa	MRFFLIRLLIEMRTAARATHTFSLDREILAEIRRTRGSLSQSERVNRLLRLALDLERRAALDRESANFYASSPADRTERRAFESATIGSLARD*
Ga0182024_102908074	3300014501	Permafrost	MRIATRATRIFSVDKEILAEMKRTRGDLSESERVNRPLRFALDLEKRAALEREIAGFFAVDREDRADPRAFESASRSSWARE*
Ga0182024_103613103	3300014501	Permafrost	MRTAIKATRTFSLDKEILAEVKRTRGDLSESERVNRLLRFALDLEKRATLEREIAGFFSADPDDRAGRRAFESASRASWARE*
Ga0182024_116765372	3300014501	Permafrost	FSLDKEILAEVKRTRGDLSESERVNRLLRFALDLEKRAALEREIASFFGVEREDRAERRAFESASRASWARE*
Ga0182027_117355721	3300014839	Fen	MGKALKATRTFSLDKEILVEVKRTKRDLSESERVNRLLRLALALERQAALEREISSFFAGAQDDRAERRAFESASITAWGRD*
Ga0157376_108147672	3300014969	Miscanthus Rhizosphere	MRTAIKRTKTFSLDEEILAEVKRTKGPQSESQRVNSLLRFALDLEKRAALDREIAGFFEDEPLARDERRAFESAAIASWTRDECL*
Ga0181511_13200102	3300016702	Peatland	RTASRRTRSFSLDHEILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPTNRTERRAFESATIESLARD
Ga0181505_103482652	3300016750	Peatland	HSFSLDREILAEIKRTRGALSQSERVNRLLRLALESERRAALERESATFYASSRADRTERRAFESATIESLARD
Ga0181505_110435261	3300016750	Peatland	MRTAARTTHSFSMDREILAEIQRTRGALSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRAFESATIESLARD
Ga0187856_10117557	3300017925	Peatland	MFSIMNANSGATVRATKTFSLDKEVLAEVKRTRGSLSESERVNRLLRFALDLERRAALEQEVADFFAEAPADRADRRAFQSASLKSWARDGCR
Ga0187803_100820622	3300017934	Freshwater Sediment	MIRLLIEMRTTARATRSFSLDREILAEIRRTRGALSQSERVNRLLRLALDWERRAALDRETASFYGSAPADRTERRAFESATIESLARD
Ga0187803_100898562	3300017934	Freshwater Sediment	MAMRTTRTFSLDKEILVEVKRTRGNLSESERVNRLLRLALDQEGRAALEREIAGFFAANREDRAERRAFETASRESWTRE
Ga0187848_100081078	3300017935	Peatland	MAAVRTTRTFSLDKEILAQVKRTKGDLSESERVNRLLRLALDLEKQAALEREIAGFFAAAPANRAERRAFESASLKPWARD
Ga0187854_103786421	3300017938	Peatland	MDREILAEIRRTRGTLSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD
Ga0187879_100599792	3300017946	Peatland	MRTASRRTRSFSLDHEILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPTNRTERRAFESATIESLARD
Ga0187879_101124842	3300017946	Peatland	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALDPERRAALERESADFYASSPADRTERRAFESATIESLARD
Ga0187879_103844212	3300017946	Peatland	MHTAARATQSFSLDREILAEVRRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPAHRTERRAFESATIESLARD
Ga0187783_101379812	3300017970	Tropical Peatland	MSTALKTTRTFSLDKAVLTEVKRTKGSLSESERVNRLLRFALDLEKRAALEREIAAFFSDASGDKPERGAFQSASLESWKRD
Ga0181520_100207674	3300017988	Bog	MGKALKATRTFSLDKEILVEVKRTKRDLSESERVNRLLRLALALERQAALEREISSFFADARDDRAERRAFESASIAAWGRN
Ga0181520_101338193	3300017988	Bog	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALESERRAALERESATFYASSRADRTERRAFESATIESLARD
Ga0187874_100777001	3300018019	Peatland	RRTRSFSLDHEILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPTNRTERRAFESATIESLARD
Ga0187885_103433102	3300018025	Peatland	MRTAARATQSFSLDREILAEVRRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPAHRTERRAFESATIESLARD
Ga0187869_101475743	3300018030	Peatland	IGLLIEMRTASRRTRSFSLDHEILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPTNRTERRAFESATIESLARD
Ga0187869_102709711	3300018030	Peatland	MRTAARATHSFSLDREILAEIRRTRGTLSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD
Ga0187867_100180334	3300018033	Peatland	MGKPLKATRTFSLDKEILVEVKRTKRDLSESERVNRLLRLALALERQAALEREISSFFADARDDRAERRAFESASIAAWGRN
Ga0187863_105891161	3300018034	Peatland	MRTAARTTHSFSMDREILAEIRRTRGTLSQSERVSRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD
Ga0187875_106990562	3300018035	Peatland	MSMGAAVRATRTFSLDKEILAEVRETKGDLSESERVNRLLRLALDLEKRAALEREIAGFFAGAHAGRAERR
Ga0187883_100969863	3300018037	Peatland	SRVGPRNFLIRLLIEMRTAARTTHSFSMDREILAEIRRTRGTLSQSERVNRLLRLALDLERRAALDRESASFYGSSPADRTERRVFEAASLASLARD
Ga0187883_102318182	3300018037	Peatland	MRTAARATQSFSLDREILAEVRRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPAHRTERRAFESAALESLARD
Ga0187887_107697651	3300018043	Peatland	TAARATHSFSLDREILAEIKRTRGALFQSERVNRLLRLALDLERRAALERESANFYASSPADRTERRAFESATIESLARH
Ga0187890_107261852	3300018044	Peatland	ARATHSFSLDREILAEIKRTRGALFQSERVNRLLRLALDLERRAALERESANFYASSPADRTERRAFESATIESLARH
Ga0187858_106492962	3300018057	Peatland	MHTAARATQSFSLDREILAEVRRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAPAHRTERRAFESAALESLARD
Ga0187771_113678231	3300018088	Tropical Peatland	MRIAAKATRTFSLDKEILAELKRTKGELSESERVNRLLHVALDLERRAALEQEIADFFAADHPDRQERRAFETASVKSWTRQK
Ga0181506_11161971	3300019260	Peatland	RTTHSFSLDREILAEIRRTRGTLSQSERVNRLLRLALDLERRAALERESANFYASSPVDRSERRAFESAAIESLARD
Ga0181512_15948842	3300019270	Peatland	GALRTTRTFSLDKEILAQVKRTKGGLSESERVNRLLRLALDLEKQAALEREIAGFFAAAPASRAERRAFESASLKSWARR
Ga0210405_100556253	3300021171	Soil	MRVATRETKTFSLDRKILAEVKRTKGTLSESERVNRLLRRALDLERRAALDAEAASFFGSARDDRAERRAFESGAVAPWTRD
Ga0210405_105863432	3300021171	Soil	MSTTSKATKTFSLDKDILQEVKRTKGDLSESARVNRLLRLALDLERRAALDQEAANFFRSAPGDRKERSAYETASLAAWTRD
Ga0210408_112723531	3300021178	Soil	KRTKGDLSESARVNRLLRLALDLERRAALDQEAANFFRSAPGDRKERSAYETASLAAWTR
Ga0210384_106891391	3300021432	Soil	MSTTSKATKTFSLDKDILQEVKRTKGDLSESARVNRLLRLALDLERRAALDQEAANFFRSAPGDRKERSAY
Ga0210398_101224674	3300021477	Soil	MRTATRATRTFSVDKEILAEVKRTRGDLSESERVNRLLRFALDLEKRATLEREIAGFFAVDRDDRAERRAFESASRASWARE
Ga0210402_107081612	3300021478	Soil	MRIAVKRTKTFSLDEEILAEVKRTKGAESESQRVNSLLRFALDLEKRVALDREIAGFFDGAPLARDERRAFDSAAIESWTRDECL
Ga0210409_107090022	3300021559	Soil	MRVATRETKTFSLDRKILAEVKRTKGTLSESERVNRLLRRALDLERRAALDAEAASFFGSARDDRVERRAFESGAVA
Ga0209640_104560492	3300025324	Soil	MPTAAKATKTFSLDREILAEIKRTKGTQSESERVNHLLKRALAVEKRAALEREVAGFFAADPDDRAARRAFQAATITVLSRE
Ga0208079_10079522	3300025481	Arctic Peat Soil	MRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL
Ga0209385_10406314	3300025650	Arctic Peat Soil	MRTAIKRTKTFSLDEEILAEVKRTKGTQSESQRVNSLLRFALDLETRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL
Ga0209584_100222581	3300025878	Arctic Peat Soil	LVGMRTAIKRTKTFSLDDEILAEVKRTKGTQSESQRVNSLLRFALDLERRVALDREIARFFDDARPARDEQRAFESAAIASWTRDECL
Ga0207686_103714751	3300025934	Miscanthus Rhizosphere	MSAAKTTRTFSLDREILSRVKRTKGSSSESKRVNDLLRLALDLEQQAALEQEIAGFFGSAPAGRDERRAFQSATLASWARD
Ga0207677_119711871	3300026023	Miscanthus Rhizosphere	MRAAIKRTKTFSLDEEILAEVKKTKGPQSESQRVNSLLRFALDLEKRAALDREIAGFFEDALPARDERRAFESAAIASWKRDECL
Ga0209849_10016703	3300026215	Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRGFQSKTLAAWARND
Ga0209849_10611372	3300026215	Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERRAFQSKTLAAWARND
Ga0209903_10011513	3300026216	Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERSAFQSKTLAAWARND
Ga0209848_10198151	3300026221	Permafrost Soil	MRTAAKITKTFSLDRAVLAEVKRTKGNLSESARVNSLLQFALDLEKRAALDRESAGFFRSAPADRQERSAFQ
Ga0209333_10013852	3300027676	Forest Soil	MEMRTAARATHSFSLDREILAEIRRTQGALSQTERVNRLLRLALDLAGRTALERETASFYAVHPADRTERRAFESAIIESLTRD
Ga0209580_106541551	3300027842	Surface Soil	MPLPTRETKTFSLDRTILAEVKRTKGALSESERVNRLLRRALDLERRVALDAEAASFFSSAPGDRAERRAFESAAVASWTRD
Ga0209274_100031544	3300027853	Soil	MRTATRATQSFSLDREILAEVKRTRGTLSQSERVNRLLRFALDLERRATLERETASFYGDAPADRTERRAFESATIESLARD
Ga0209517_100631064	3300027854	Peatlands Soil	MPAIKATRTFSLDKEILAKVKRTRGSLSESERVNRLLRFALDQEKRAALASEIAGFFASHREDRAERRAFESASRESWTRE
Ga0209166_101202692	3300027857	Surface Soil	MRTATRDTRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFATAPDHPAERRAFESAAVASWTRH
Ga0209167_105304372	3300027867	Surface Soil	MRIATRDTRTFSLDRKILAEVKRTKGGLSESERVNRLLRRALDLERRAALDAEAASFFASVRGDQKERRAFEYAAVASWTRH
Ga0209579_103983251	3300027869	Surface Soil	MRIATRDTRTFSLDRKILAEVKRTKGALSESERVNRLLRRALDLERRAALDAEAASFFGSAGDHRAERRAFESAAVASWTRD
Ga0302325_100804617	3300031234	Palsa	MRTAARTTQSFSLDCEILAEVKRTRGALSQSERVNRLLRLALDLERRAAFEREAATFYKSAPEDRAERRAFESAALESLARD
Ga0302325_106199162	3300031234	Palsa	MPTATRATRTFSVDKEILAEVKRTRGDLSESERVNQLLRFALDLEKRTALEPEIAGFFAVDREDRAERRAFESASRSSWARE
Ga0302324_1002359154	3300031236	Palsa	MRFFLIRLLIEMRTAARATHTFSLDREILAEIRRTRGSLSQSERVNRLLRLALDLERRAALDRESANFYASSPADRTERRAFESATIGSLARD
Ga0310686_1068753352	3300031708	Soil	MRTAVKATKTFSVDKEILAEVKRTRGDLSESERVNRLLRFALDLEKRAALDREIAGFFAVDREDRAEHRAFESASQSSWARE
Ga0307474_114474392	3300031718	Hardwood Forest Soil	MRAATKATRSFSLDRDVLAEVKRTRGALSESERVNRLLRTALEREKRAALEREIADFFASKSNDRRERRAFESASVVSWARE
Ga0307477_105852892	3300031753	Hardwood Forest Soil	MSLTTRETRTFSLDRKILAEVKRTKGSLSESERVNRLLRRALDLERRAALDAEAASFFGSARDNRAERRAFESAAVASWTRD
Ga0311301_103511402	3300032160	Peatlands Soil	MRTTARATQSFSLDREILAEVKRTRGTLSQSERVNRLLRLALDLERRAALERETASFYGSAAGDRIERRAFESATIESLARD
Ga0311301_114992301	3300032160	Peatlands Soil	MRAATKAARTFSLDKEILVEVKRTKGDLSESERVNRLLRFALDLEKRAALEREIAGFFSANREDRAERRAFESRSRASWARE
Ga0315281_116949272	3300032163	Sediment	IICSMPAAKTTRTFSLDREILAQVKRTKGPSSESKRVNDLLRLALDLEKRAALEQEIAGFFRSAPAGRDERRAFQSATLASWDRD
Ga0307472_1002805833	3300032205	Hardwood Forest Soil	MRLATRETKTFSLDRKILAEVKRTKGALSESERVNRLLRRALDVERRAALDAEAANFFGSARDDRAERRAFESGAVASWTRD
Ga0307472_1003339362	3300032205	Hardwood Forest Soil	MRLATRETRTFSLDRKILAEVKRTKGVLSESERVNRLLRRALDLERRAALDAEAASFFASARDHKAARRAFESAAVASWTRD
Ga0307472_1015724562	3300032205	Hardwood Forest Soil	LIGMRTATRDTRTFSLDRRILAEVKRTKGGLSESERVNRLLRRALDLERRAALDAEAASFFGSARGGEKERRAFESAAVASWTRD
Ga0335078_100277182	3300032805	Soil	MRTAARATHSFSLDREILAEIKRTRGALSQSERVNRLLRLALDSERRAALERESASFYSAPADRTERRAFESATIESLARD
Ga0326728_100424351	3300033402	Peat Soil	MPAIKATRTFSLDKKILAEVKRTRGSLSESERVNRLLRFALEQERRAALDLEIAGFFASHREDRAERRAFESASRESWTRE
Ga0334792_055441_3_206	3300033888	Soil	MRTAARAPHSFSLDREILAEIKRTRGALSQNERANRLLRLALDSERRAALERESANFDASSPADRTER
Ga0370484_0035268_134_391	3300034125	Untreated Peat Soil	MPTAIKRTKTFSLDEEILAEVKRTKGSQSESQRVNSLLRFALDLETRAALDREIARFFDDAPPARDERRAFESAAIASWTRDECL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences