Metagenome / Metatranscriptome Family F053712

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053712
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	47 residues
Representative Sequence	MTPLEHDELLTKCQIFEKETVTRPEETNQRSETESKETEHGGDL
Number of Associated Samples	63
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.14 %
% of genes near scaffold ends (potentially truncated)	54.29 %
% of genes from short scaffolds (< 2000 bps)	67.86 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (41.429 % of family members)
Environment Ontology (ENVO)	Unclassified (51.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00072	Response_reg	2.86
PF13520	AA_permease_2	2.86
PF12704	MacB_PCD	2.86
PF04185	Phosphoesterase	2.86
PF13676	TIR_2	2.14
PF03551	PadR	1.43
PF08388	GIIM	1.43
PF00589	Phage_integrase	1.43
PF02129	Peptidase_S15	1.43
PF13683	rve_3	1.43
PF00753	Lactamase_B	1.43
PF08238	Sel1	0.71
PF05995	CDO_I	0.71
PF00149	Metallophos	0.71
PF00491	Arginase	0.71
PF00440	TetR_N	0.71
PF09907	HigB_toxin	0.71
PF13620	CarboxypepD_reg	0.71
PF13565	HTH_32	0.71
PF00665	rve	0.71
PF08308	PEGA	0.71
PF12779	WXXGXW	0.71
PF03992	ABM	0.71
PF13086	AAA_11	0.71
PF07676	PD40	0.71
PF00691	OmpA	0.71
PF13649	Methyltransf_25	0.71
PF07638	Sigma70_ECF	0.71
PF00069	Pkinase	0.71
PF01548	DEDD_Tnp_IS110	0.71
PF01266	DAO	0.71
PF10042	DUF2278	0.71
PF13419	HAD_2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.86
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.86
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.43
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.43
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.43
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.71
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.71
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.71
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.86 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.14 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.43 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.43 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.71 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.43 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	1.43 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.71 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.71 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.71 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.71 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	1.43 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.71 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.71 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.71 %
Hyellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae	0.71 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.71 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.71 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
unclassified Herpetosiphonaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae	1.43 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.71 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.71 %
Pleurocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Pleurocapsa	0.71 %
Cupriavidus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis	0.71 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.71 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.71 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.71 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	1.43 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.71 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.71 %
Pleurocapsa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Pleurocapsa	0.71 %
Cupriavidus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis	0.71 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.71 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.71 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.71 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10207575	Not Available	520	Open in IMG/M
3300004633\|Ga0066395_10032050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2199	Open in IMG/M
3300004633\|Ga0066395_10619601	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005332\|Ga0066388_100413795	All Organisms → cellular organisms → Bacteria → Acidobacteria	1992	Open in IMG/M
3300005332\|Ga0066388_103519992	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005363\|Ga0008090_15459455	Not Available	569	Open in IMG/M
3300005764\|Ga0066903_103040337	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005764\|Ga0066903_107390159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010043\|Ga0126380_10164484	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300010043\|Ga0126380_10195362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300010046\|Ga0126384_10576393	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300010046\|Ga0126384_11532805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	625	Open in IMG/M
3300010047\|Ga0126382_11453361	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010048\|Ga0126373_10031121	All Organisms → cellular organisms → Bacteria → Acidobacteria	4615	Open in IMG/M
3300010048\|Ga0126373_10146780	All Organisms → cellular organisms → Bacteria → Proteobacteria	2238	Open in IMG/M
3300010048\|Ga0126373_10204530	Not Available	1916	Open in IMG/M
3300010048\|Ga0126373_10286989	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300010048\|Ga0126373_10665226	Not Available	1098	Open in IMG/M
3300010048\|Ga0126373_10967742	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300010048\|Ga0126373_12177046	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300010048\|Ga0126373_12330223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	596	Open in IMG/M
3300010048\|Ga0126373_12579116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010048\|Ga0126373_12969802	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300010358\|Ga0126370_10449198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1074	Open in IMG/M
3300010359\|Ga0126376_11031985	Not Available	825	Open in IMG/M
3300010359\|Ga0126376_12880226	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010361\|Ga0126378_10148450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2383	Open in IMG/M
3300010361\|Ga0126378_11230787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300010361\|Ga0126378_11291050	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300010361\|Ga0126378_12078449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010376\|Ga0126381_100302870	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300010376\|Ga0126381_100360710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2012	Open in IMG/M
3300010376\|Ga0126381_100372177	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300010376\|Ga0126381_101557334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300010376\|Ga0126381_105034832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010398\|Ga0126383_10399676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1410	Open in IMG/M
3300010398\|Ga0126383_10931878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300012971\|Ga0126369_10532253	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012971\|Ga0126369_10921431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300012971\|Ga0126369_11271427	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012971\|Ga0126369_11912446	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300012971\|Ga0126369_12928777	Not Available	559	Open in IMG/M
3300016270\|Ga0182036_10013551	All Organisms → cellular organisms → Bacteria	4437	Open in IMG/M
3300016270\|Ga0182036_10517735	Not Available	947	Open in IMG/M
3300016319\|Ga0182033_10442618	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300016319\|Ga0182033_10808179	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300016319\|Ga0182033_10819299	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300016319\|Ga0182033_11740494	Not Available	565	Open in IMG/M
3300016357\|Ga0182032_10332718	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300016371\|Ga0182034_10254078	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300016387\|Ga0182040_10069812	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300016387\|Ga0182040_10234390	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300016387\|Ga0182040_10965198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300016404\|Ga0182037_10060632	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300016422\|Ga0182039_10508469	Not Available	1041	Open in IMG/M
3300016445\|Ga0182038_10254779	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300017970\|Ga0187783_10307552	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300021560\|Ga0126371_10031819	All Organisms → cellular organisms → Bacteria → Acidobacteria	4944	Open in IMG/M
3300021560\|Ga0126371_10154215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2361	Open in IMG/M
3300021560\|Ga0126371_10853763	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300021560\|Ga0126371_10938426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis	1008	Open in IMG/M
3300021560\|Ga0126371_11790513	Not Available	736	Open in IMG/M
3300021560\|Ga0126371_11987125	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021560\|Ga0126371_13924155	Not Available	501	Open in IMG/M
3300026859\|Ga0207859_1005240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	1218	Open in IMG/M
3300027043\|Ga0207800_1017615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	1173	Open in IMG/M
3300027527\|Ga0209684_1017056	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300028047\|Ga0209526_10905320	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031057\|Ga0170834_108403039	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031573\|Ga0310915_11239188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Pleurocapsa	515	Open in IMG/M
3300031680\|Ga0318574_10152068	All Organisms → cellular organisms → Bacteria → Acidobacteria	1315	Open in IMG/M
3300031680\|Ga0318574_10963209	Not Available	500	Open in IMG/M
3300031719\|Ga0306917_11030571	Not Available	642	Open in IMG/M
3300031719\|Ga0306917_11385994	Not Available	542	Open in IMG/M
3300031744\|Ga0306918_10775076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300031748\|Ga0318492_10403664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	719	Open in IMG/M
3300031753\|Ga0307477_10025732	All Organisms → cellular organisms → Bacteria	4020	Open in IMG/M
3300031771\|Ga0318546_10658886	Not Available	736	Open in IMG/M
3300031795\|Ga0318557_10231655	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300031796\|Ga0318576_10498059	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031833\|Ga0310917_10029107	All Organisms → cellular organisms → Bacteria	3251	Open in IMG/M
3300031833\|Ga0310917_11003477	Not Available	559	Open in IMG/M
3300031879\|Ga0306919_10935633	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031890\|Ga0306925_10106458	All Organisms → cellular organisms → Bacteria → Proteobacteria	2988	Open in IMG/M
3300031890\|Ga0306925_10357874	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300031890\|Ga0306925_10393406	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300031890\|Ga0306925_10670525	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031890\|Ga0306925_11867748	Not Available	572	Open in IMG/M
3300031910\|Ga0306923_10601453	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300031910\|Ga0306923_10711167	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1117	Open in IMG/M
3300031910\|Ga0306923_10720959	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031912\|Ga0306921_10308189	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300031912\|Ga0306921_10546404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344	Open in IMG/M
3300031941\|Ga0310912_10210023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300031942\|Ga0310916_11369430	Not Available	580	Open in IMG/M
3300031945\|Ga0310913_10253946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	1235	Open in IMG/M
3300031946\|Ga0310910_10164764	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300031946\|Ga0310910_10478023	Not Available	989	Open in IMG/M
3300031946\|Ga0310910_11445736	Not Available	528	Open in IMG/M
3300031947\|Ga0310909_10518888	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031954\|Ga0306926_10083840	All Organisms → cellular organisms → Bacteria	3883	Open in IMG/M
3300031954\|Ga0306926_10220412	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2354	Open in IMG/M
3300031962\|Ga0307479_10126843	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300032001\|Ga0306922_10662962	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300032001\|Ga0306922_10924686	Not Available	904	Open in IMG/M
3300032035\|Ga0310911_10375956	Not Available	821	Open in IMG/M
3300032055\|Ga0318575_10593275	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300032066\|Ga0318514_10203805	Not Available	1037	Open in IMG/M
3300032076\|Ga0306924_10031894	All Organisms → cellular organisms → Bacteria → Proteobacteria	5728	Open in IMG/M
3300032076\|Ga0306924_10177797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2441	Open in IMG/M
3300032076\|Ga0306924_10829440	Not Available	1028	Open in IMG/M
3300032076\|Ga0306924_11075762	Not Available	878	Open in IMG/M
3300032261\|Ga0306920_101538641	Not Available	948	Open in IMG/M
3300032261\|Ga0306920_102290559	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.43%
Loam	Environmental → Terrestrial → Soil → Loam	7.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.86%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	41.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_102075751	3300004268	Tropical Forest Soil	IQLWVRMTPLDHDELLTKYQIFEKETVTRPEETNQRSETESKETEHGGDL*
Ga0066395_100320506	3300004633	Tropical Forest Soil	MTVLEHDELLTKYQIFEKETVTRPEETNQRSQTESKETEHGG
Ga0066395_106196012	3300004633	Tropical Forest Soil	RARMTPLKHDKLLTKCQILEEQTVMRAKEANQRSEGESKETKHSGEL*
Ga0066388_1004137951	3300005332	Tropical Forest Soil	MTALKHDKLLTKCQILKEQTVMRAKEAKQRSEGESKETKHSGEL*
Ga0066388_1035199921	3300005332	Tropical Forest Soil	MTPLEHDELLTKCQIFEKETATRPEETNQRSQSESKETEHGGDL*
Ga0008090_154594551	3300005363	Tropical Rainforest Soil	MTPLEHDELLTKCQIFEKETVTRPEETNQRSETESKETEHGGDL*
Ga0066903_1030403371	3300005764	Tropical Forest Soil	MTPLEHDELLTKCQIFEKEIVTRPEETNQRSQTESKETEHGGDL*
Ga0066903_1073901591	3300005764	Tropical Forest Soil	MTSLEHDELLTKCEILEKKAVMRTKEANQRSETESKETKHGG*
Ga0126380_100059091	3300010043	Tropical Forest Soil	MTPLKHDKLLTKCQILEEQTVMQAKEANQRSEGESKEMKHSGEL*
Ga0126380_101644842	3300010043	Tropical Forest Soil	MTPFEHHELLTKYEILEKKIVMRPKEANQRSERESKETEHGGEL*
Ga0126380_101953623	3300010043	Tropical Forest Soil	RMTPLKHDKLLTKCQILKEQTVMRAKEAKQRSEGESKETKHSGEL*
Ga0126384_105763931	3300010046	Tropical Forest Soil	PEELVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSQTESKETEHGGDL*
Ga0126384_115328051	3300010046	Tropical Forest Soil	EFVGQIQPWARMTPFEHDELLTKCEILEKKTVMRPKEANQRSERESKETEHGGEL*
Ga0126382_114533611	3300010047	Tropical Forest Soil	MTPLEHDELLTKREIFEKKTVMRKKEANQRSERESKETEHGGEL*
Ga0126373_100311211	3300010048	Tropical Forest Soil	MTPLKHDKLLTKCQILKEQTVMRAKEAKQRSEGESKETKHSGEL*
Ga0126373_101439583	3300010048	Tropical Forest Soil	KHDKLLTKCQILEEQTVMRAKEANQRSEGESKETKHSGEL*
Ga0126373_101467804	3300010048	Tropical Forest Soil	LFPAGPASANQQPKEFVEQIQLWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRP
Ga0126373_102045305	3300010048	Tropical Forest Soil	LLTKCQIFEKETVTRPEETNQHSQTEFKETEHAGDL*
Ga0126373_102869892	3300010048	Tropical Forest Soil	MTVLEHDELLTKYQIFEKETVTRPKETNQRSETKPKETEHGEEL*
Ga0126373_106652261	3300010048	Tropical Forest Soil	HHELLTKYEILEKKIVVRPKEANQRSERESKETEHGGEL*
Ga0126373_109677421	3300010048	Tropical Forest Soil	LFPAGPASANQQPEEFVEQIQLWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRPEPESKETKHCGKL*
Ga0126373_110071502	3300010048	Tropical Forest Soil	MTPLEHDELLTKGQIFDKKAVMRAKEANQRSEEESKEAQHDGEL*
Ga0126373_119395751	3300010048	Tropical Forest Soil	MVPLEHDELLAKRQILKEKTGMRAKEAKERSKAEAKKTRHIGEL*
Ga0126373_121770462	3300010048	Tropical Forest Soil	MTPFEHDKLLTKCEIFEKKTAMRPKEANQRSERESKETEHGGEL*
Ga0126373_123302231	3300010048	Tropical Forest Soil	LWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRPEPESKETKHSEKL*
Ga0126373_125791161	3300010048	Tropical Forest Soil	MTPLEHDELLTKYQIFEKETVTRPKETNPRSETKPKETEHGGEL*
Ga0126373_129698021	3300010048	Tropical Forest Soil	LWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRPEPESKVTKHSGKL*
Ga0126370_100855231	3300010358	Tropical Forest Soil	MVPLEHDELLTKRQILEKKGVMRAKEVNQGSEAESKEMKHSGEL*
Ga0126370_102901043	3300010358	Tropical Forest Soil	LTKCQILEEQTVMQAKEANKRSEGESKEMKYSGEL*
Ga0126370_104491981	3300010358	Tropical Forest Soil	IQPWARMTPFEHHELLTKYEILEKKIVMRPKEANQRSERESKETEHGGDL*
Ga0126370_126478182	3300010358	Tropical Forest Soil	MTPLKHDKLLTKCQILEEQTVMRAKEANQRSEGESKETKHSGEL*
Ga0126376_110319851	3300010359	Tropical Forest Soil	MTPLEHDELLTKCQIFEKETATRPEETNQRSQSESKQTEHGGDL*
Ga0126376_128802261	3300010359	Tropical Forest Soil	VNYQPEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQHSQTEFKETEHAGDL*
Ga0126378_100207021	3300010361	Tropical Forest Soil	RARMTPLKHDKLLTKCQILEEQTVMQAKEANQRSEGESKEMKHSGEL*
Ga0126378_101484505	3300010361	Tropical Forest Soil	GQIQRRARMTPLEHDELLTKCQILEKETVTRPEETNQRSATESKETEHGGDL*
Ga0126378_103730441	3300010361	Tropical Forest Soil	MTPLKHDKLLTKCQILEEQAEMQAKEANQRSEGESKEMKHSGKL*
Ga0126378_106722951	3300010361	Tropical Forest Soil	RARMTPLKHDKLLTKCQILEEQTVMRAKEANQRSEGESKEMKHSGEI*
Ga0126378_107104221	3300010361	Tropical Forest Soil	MTPLEHDELLTKGQIFDKKAVMRAKEANQRSEAESKEAQHDGEL*
Ga0126378_112307872	3300010361	Tropical Forest Soil	ARMTPFEHDKLLTKCEIFEKKTAMRPKEANQRSERESKETEHGGEL*
Ga0126378_112910501	3300010361	Tropical Forest Soil	MTPLEHDELLTKCEIFEKKTVVRTKEANQRSKPESKETEHGGEL*
Ga0126378_120784491	3300010361	Tropical Forest Soil	MTPLEHEELLTKGQIFEKKTLMRAKEAKQRSETESKETEHGGDL*
Ga0126378_122227492	3300010361	Tropical Forest Soil	LKHDKLLTKCQILEEQAVMQAKEANQRSEGVSKEMKHSGEL*
Ga0126377_106120041	3300010362	Tropical Forest Soil	MTPLKHDKLLTKCQILKEQTVMRAKEANQRSEGESKEMKHSGEL*
Ga0126381_1001341964	3300010376	Tropical Forest Soil	RARMTPLKHDKLLTKCQILEEQAVMQAKEANQRSEGESKEMKHSGKL*
Ga0126381_1002092001	3300010376	Tropical Forest Soil	RARMTPLKHDKLLTKCQILEEQAVMQAKEANQRSEGESKETKHSGKL*
Ga0126381_1003028703	3300010376	Tropical Forest Soil	MTPLEHDELLTKCKIFEKKTVMRTKETNQRSGAESKETEHGGEL*
Ga0126381_1003607102	3300010376	Tropical Forest Soil	MTPLEHEELLTKGQIFEKKTLMRAKEAKQRSETESKETNHIGEL*
Ga0126381_1003721772	3300010376	Tropical Forest Soil	LANYQPENFVEWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSQTEFKETEHGGDL*
Ga0126381_1013491752	3300010376	Tropical Forest Soil	AQEAFFEEKTVMRTKEANQRSEAESKETEHGGEL*
Ga0126381_1015573341	3300010376	Tropical Forest Soil	PARPSWRKQQPEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSQTESKETEHGGDL*
Ga0126381_1050348321	3300010376	Tropical Forest Soil	LFPAGPASANQQPEEFVEQIQLWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRPEPESKETKHSGKL*
Ga0126383_103996761	3300010398	Tropical Forest Soil	PLEHDELLTKCQIFEKETATRPEETNQRSPSESKETEHGGDL*
Ga0126383_109318782	3300010398	Tropical Forest Soil	MTPLEHDKLLAECQILEAETVVRAKEANQRSEAESKETKHGGEL*
Ga0126369_105322532	3300012971	Tropical Forest Soil	MTPLEHDELLTKCKIFEKKTVMRTKETNQRSEAESKETEHGGEL*
Ga0126369_109214313	3300012971	Tropical Forest Soil	MTPLEHDELLTNSQIFEKKTLMRSKETKQRSEAESEETKHGGEL*
Ga0126369_112714272	3300012971	Tropical Forest Soil	MTPLEHDELLTKGQIFEKKTLMRSKETKQCSEAEPEETKHGGEL*
Ga0126369_119124461	3300012971	Tropical Forest Soil	QPEEFVEQIQLWARMTPFEHDKLLTKCQVFEKKTMTRTKEANQRPEPESKETKHSEKL*
Ga0126369_129287772	3300012971	Tropical Forest Soil	MTPFEHDKLLTKGQILEKKTLMRAKEANQRSETESEETKHNGEL*
Ga0182036_100135511	3300016270	Soil	PEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSQTESKETEHGGDL
Ga0182036_105177352	3300016270	Soil	LSPARPAPTNQQPEEFVGQIQLWARMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0182036_118726271	3300016270	Soil	QLRAWMVPLEHDELLTKRQILEKKGVTRAKEANQGSDAESKETKHSGEL
Ga0182033_104426181	3300016319	Soil	PEEFVEQIQLWARMTSLEHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGGEL
Ga0182033_108081791	3300016319	Soil	PEEFVEQIQLWARMTSLEHDELLTKCQILKKQTVTRPKETNQRSETECKETEHGGEL
Ga0182033_108192993	3300016319	Soil	MTQLEDDEMLTKGQTFEKKTLMRSKETKQCSEAESEETKHGESYRRT
Ga0182033_117404941	3300016319	Soil	VGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSQTESKETEHGGDL
Ga0182035_101912882	3300016341	Soil	MVPLEHDELLTKGQILEKEAGMRAKEANQRSEAESKETRHIGEL
Ga0182032_103327181	3300016357	Soil	PAPTNQQPEEFVGQIQLWARMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0182034_102540783	3300016371	Soil	QIQLWARMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0182034_109201041	3300016371	Soil	PLEHDELLTKGQILEKKSGMRAKEAKERSEAESKETRHIREL
Ga0182040_100698121	3300016387	Soil	PEEFVDQIQLWARMTSLEHDELLTKRQILKKQTVTRPKETNQRSETECKETEHGGEL
Ga0182040_102343902	3300016387	Soil	MTPLEHDELLTKCQIFEKESVTRAEETNQRSETEFKETEHGGDL
Ga0182040_109651981	3300016387	Soil	MTPLEHDELLTKYQIFEKETVTRPEETNQRSETEPKETEHGGDL
Ga0182037_100606321	3300016404	Soil	MAALEHDELMTKCQIFEKETVTRPEETNQRSETESKETEH
Ga0182039_105084691	3300016422	Soil	FVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0182038_102547792	3300016445	Soil	WARMTPLEHDELLTKCQIFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0187783_103075522	3300017970	Tropical Peatland	MTPFEHHELLTKRQILEKETAMRAKETNQRSEAESKEAQHDGEL
Ga0126371_100318196	3300021560	Tropical Forest Soil	MTPFEHDKLLTKCEIFEKKTAMRPKEANQRSEKESKETEHGGEL
Ga0126371_101542154	3300021560	Tropical Forest Soil	MTPLEHDELLTKGQIFEKKTLMRSKETKQCSEAEPEETKHGGEL
Ga0126371_102881655	3300021560	Tropical Forest Soil	MTPLKRDKLLTKCQILEEQTVMQAKEANQRSEGESKEMKDSGEL
Ga0126371_108537632	3300021560	Tropical Forest Soil	MTPLEHDELLTNSQIFEKKTLMRSKETKQRSEAESEETKHGGEL
Ga0126371_109384261	3300021560	Tropical Forest Soil	MTSLEHDELLTKCQILKKQTVMRTKEANQRSETESE
Ga0126371_117905132	3300021560	Tropical Forest Soil	ARMTSREHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGGEL
Ga0126371_119871252	3300021560	Tropical Forest Soil	MTVLEHDELLTKYQVFEKETVTRPKETNQRSETKPKETEHGEEL
Ga0126371_139241551	3300021560	Tropical Forest Soil	PLKHDKLLTKCQILEKQTAMRAKEANQRSEGQSKETKHIGPL
Ga0207859_10052401	3300026859	Tropical Forest Soil	LWVRMASLEHDELLTKCQILKKETVTRPKETNQRSETEFKETEHGGD
Ga0207800_10176153	3300027043	Tropical Forest Soil	EEFVEQIQLWVRMASLEHDELLTKCQILKKETVTRPKETNQRSETEFKETEHGGD
Ga0209684_10170561	3300027527	Tropical Forest Soil	MTPLEHGELLTKCQIFEKETVTRPEETNQRSETESKETE
Ga0209526_109053203	3300028047	Forest Soil	MMPLEHDELLTQCQILENETVMRAKEVNQRSEAESKETKHASRL
Ga0170834_1084030392	3300031057	Forest Soil	MAPLEYDQLLTKCQILEKETATRAKKANERSEAESKETKLGRGL
Ga0318541_103170621	3300031545	Soil	RLTKCQIFEKETFTRPEKTNQRSETESKETEHGGDL
Ga0310915_112391881	3300031573	Soil	ELSTKCQILKKQTVTRPKETNQRSETESKEAEHGGEL
Ga0318574_101520682	3300031680	Soil	MTSLEHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGGEL
Ga0318574_109632092	3300031680	Soil	PSLEHDELSTKCQILKKQTVTRPKETNQRSETESKEAEHGGEL
Ga0306917_110305712	3300031719	Soil	DELLTKCKIFEKKTVTRTKEANQRSEAESKETEHGGEL
Ga0306917_113859941	3300031719	Soil	MTPLEHDELLTKCQIFENETVTRPEETNQRSQTESKETEHGG
Ga0306918_107750762	3300031744	Soil	MTPLEHDKLLTKCQIFEEKTMMRTKEANQRSETESKETEH
Ga0318492_104036642	3300031748	Soil	MTSLEHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGEEL
Ga0307477_100257325	3300031753	Hardwood Forest Soil	MAPLEHDELLTKCEIFEKKTVMRTKEANQRSEKETEHGGEL
Ga0318521_101207953	3300031770	Soil	LTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0318546_106588861	3300031771	Soil	DELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0318557_102316551	3300031795	Soil	ANYQPEEFVEQIQLWARMTSLEHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGGE
Ga0318576_104980592	3300031796	Soil	LSTKCQILKKQTVTRPKETNQRSETESKEAEHGGEL
Ga0318568_109281142	3300031819	Soil	PEGLVEQIQLWAWMVPLEHDELLTKRQILEKKGVMRAKEANQSSDAESKETKHGGEL
Ga0310917_100291075	3300031833	Soil	EFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0310917_110034771	3300031833	Soil	QIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0306919_105993922	3300031879	Soil	MVPLEHDELLTKRQILEKKGVMRAKEANQSSDAESKETKHGGEL
Ga0306919_109356332	3300031879	Soil	EHDELSTKCQILKKQTVTRPKETNQRSETESKEAEHGGEL
Ga0306925_101064582	3300031890	Soil	MTPLEHDKLLTKCQIFEEKTMMRTKEANQRSETESKETEHGGDL
Ga0306925_103578742	3300031890	Soil	MTPLEHDELLTKCQSLKKETVTRSKETNQRSEAEFKETEHGGEL
Ga0306925_103934063	3300031890	Soil	CLSPARPAPTNQQPEEFVGQIQLWARMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0306925_106705253	3300031890	Soil	QIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0306925_118677481	3300031890	Soil	VGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0306923_106014533	3300031910	Soil	MTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESKETEHGGDL
Ga0306923_107111672	3300031910	Soil	VANYQPEEFVGQIQRWARMKPLEHHKLLTKGQIFEKETVARVKNAEQRSKAESKKAKHHGDL
Ga0306923_107209591	3300031910	Soil	MAALEHDELMTKCQIFEKETVTRPEETNQRSETESKETEHGGDL
Ga0306921_103081893	3300031912	Soil	GQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSQTESKETEHGGDL
Ga0306921_105464041	3300031912	Soil	MTPFEHDELLTKCQILKEETVTRPKETNQRSETESRE
Ga0310912_102100231	3300031941	Soil	DELLTKRQILEKKGVMRAKEANQSSDAESKETKHGGEL
Ga0310916_113694302	3300031942	Soil	IQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSETESKETEHCGDL
Ga0310913_102539462	3300031945	Soil	VPHTNEFVGQIQLRARMTPLEHDELLTKCQIFENETVTRPEETNQRSQTESKETEHGGDL
Ga0310913_104583291	3300031945	Soil	VPLEHDELLTKRQILEKKGVMRAKEANQSSDAESKETKHGGEL
Ga0310910_101647642	3300031946	Soil	GQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNQRSETESKETEHCGDL
Ga0310910_104780231	3300031946	Soil	PEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSQTESKETEHGGDL
Ga0310910_114457361	3300031946	Soil	TPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0310909_105188881	3300031947	Soil	ELMTKCQIFEKETVTRPEETNQRSETESKETEHGGDL
Ga0306926_100838405	3300031954	Soil	PASANCQPEEFVEQIQLWARMTSLEHDELLTKCQILKKQTVTRPKETNQRSETECKETEHGGEL
Ga0306926_102204123	3300031954	Soil	RMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0307479_101268432	3300031962	Hardwood Forest Soil	MAPLEHDELLTKCEIFEKKTVMRTTEANQRSEKETEHGGEL
Ga0306922_106629621	3300032001	Soil	QPEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0306922_109246862	3300032001	Soil	DKLLTKCQIFEEKTMMRTKEANQRSETESKETEHGGDL
Ga0310911_103759561	3300032035	Soil	IQLRARMTPLEHDELLTKCQIFENETVTRPEETNQRSQTESKETEHGGDL
Ga0318575_105932751	3300032055	Soil	QPEEFVEQIQLWARMTSLEHDELLTKCQILKKQTVTRPKETSQRSETECKETEHGGEL
Ga0318514_102038051	3300032066	Soil	TNQQPEEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGD
Ga0306924_100318941	3300032076	Soil	EEFVGQIQLWARMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESNETEHGGDL
Ga0306924_101777972	3300032076	Soil	MTPLEHDELLTKCKIFEKKTVTRTKEANQRSEAESKETEHGGEL
Ga0306924_108294403	3300032076	Soil	PEEFVGQIQLWTPMTPLEHDELLTKCQIFEKETVTRPEKTNQRSETESKETEHGGDL
Ga0306924_110757623	3300032076	Soil	VDQIQLWARMTSLEHDELLTKRQILKKQTVTRPKETNQRSETECKETEHGGEL
Ga0306920_1015386412	3300032261	Soil	PTNQQPEEFVGQIQLWARMTPLEHDELLTKCQTFEKETVTRPEETNLRSQTESKETEHGGDL
Ga0306920_1022905591	3300032261	Soil	MTPFEHDELLTKCQILKEETVTRPKETNQRSETESRETEHGR
Ga0310914_106648343	3300033289	Soil	MTKCQIFEKETVTRPEETNQRSETESKETEHGGDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053712

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences