NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F053876

Metagenome Family F053876

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053876
Family Type Metagenome
Number of Sequences 140
Average Sequence Length 76 residues
Representative Sequence VLAALVPVLAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVAAGILLIFAATVFLPIAYTVSR
Number of Associated Samples 83
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.29 %
% of genes near scaffold ends (potentially truncated) 27.86 %
% of genes from short scaffolds (< 2000 bps) 87.86 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.429 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(32.857 % of family members)
Environment Ontology (ENVO) Unclassified
(34.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.714 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.92%    β-sheet: 0.00%    Coil/Unstructured: 48.08%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VLAALVPVLAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVAAGILLIFAATVFLPIAYTVSRCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
71.4%28.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Serpentine Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Natural And Restored Wetlands
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Ionic Liquid And High Solid Enriched
2.9%32.9%2.9%18.6%3.6%4.3%7.9%10.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10149061833300000364SoilVHAALAVLIADFLGGGGPSQSGDFRVSPTFFLVLLGLGFAIGTVGHIVKSRTLQAAGVLLVLAATVFLPIAYSVSR*
C688J35102_11861290123300002568SoilVLAALAALADFLPGPGPGQSGDFRVSPTFFIVLLGLGFLIGTIGHIVRSKTLQAAGIVLVLASTFILPIAYSVSH*
C688J35102_12023079323300002568SoilVLAALAALADFLPGGGPGQSGDFRVSPTFFIVLLGLGFLIGTIGHIVRSRVLQAAGVLLVLSATVFLPIAYSVSH*
Ga0055466_1021665623300003997Natural And Restored WetlandsVLAALVLAMSDFLNPDDGPEPSGEFRVSPTFLIVLLLLGFLIGTVGHVVKSRTLQIAGVLLIFAATILLPVAYSISN*
Ga0063454_10017516523300004081SoilAALADFLPGGGPGQSGDFRVSPTFFIVLLGLGFLIGTIGHIVRSRVLQAAGVLLVLSATVFLPIAYSVSH*
Ga0062590_10048457623300004157SoilVHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTIGHIVKSRTLQAAGVLLVLAATVFLPIAYSVSR*
Ga0062590_10245218213300004157SoilSGPKDTFAPVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTAGHIIKSRTLQIAGILLIFAATIFLPVAYSISN*
Ga0063356_10057124923300004463Arabidopsis Thaliana RhizosphereVLAALVLAMSDFLNPDDGPEPSGEFRVSPTFLIVLLGLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYSISN*
Ga0062595_10022261233300004479SoilVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0062595_10124947423300004479SoilVLAALAVTMADFLPGSGPGQSGDFRVSPTFFILVLGAGFVIGTFGHILKSRTLQAIGVILVLAATVVLPIAYTVSQ*
Ga0062591_10053080423300004643SoilVLAALVPLLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGILLIFAATIFLPIAYSVSR*
Ga0068869_10073294123300005334Miscanthus RhizosphereVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIALLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0070660_10103573413300005339Corn RhizosphereLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0070692_1088918813300005345Corn, Switchgrass And Miscanthus RhizosphereVHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTVGHIVKSRTLQAAGVLLVLAATVFLPIAYSVSR*
Ga0068860_10181820313300005843Switchgrass RhizospherePVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0081539_1008092143300005985Tabebuia Heterophylla RhizosphereVPAALAALLADFLPGSGPGQSGDFRVSPTFFIVLLGLGFLIGTIGHIVKSRVLQAAGVLLVLAATVFLPIAYSVSH*
Ga0075428_10001402753300006844Populus RhizosphereVLAALVPLMAQFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR*
Ga0075428_10108541423300006844Populus RhizosphereVRAAFVLVVAQFLNPDSGPDQSGEFRVSPTTLIVLMGLGFLIGALGHLFKSRTLQAAGVLLILAATIFLPIAYSVSR*
Ga0075421_10137882923300006845Populus RhizosphereVRAALVPLIAQFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR*
Ga0075430_10004312243300006846Populus RhizosphereVLAALVPLMAQFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSHTLVAAGILLIFAATIFLPIAYTVSR*
Ga0079217_1084914723300006876Agricultural SoilKDTFAPVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTVGHIVKSRTLQIAGVLLIFAATIFLPLAYSISN*
Ga0079217_1096141423300006876Agricultural SoilVLVALVPVLAQFLPDDGPGQSGDFQVSPRLFLVLLGLGFLIGTVGHIIKSRTLVAAGILLIFAATIFLPVAYTISR*
Ga0079215_1011297823300006894Agricultural SoilVLAALVLAMSDFLSPDDGPEPSGDFRVSPTFLIVLLLLGFLIGTVGHIVKSKTLQIAGVLLIFAATIFLPIAYSISN*
Ga0079216_1106778423300006918Agricultural SoilVLVALVPVLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPVAYTVSR*
Ga0075419_1098560523300006969Populus RhizosphereVRAALVLAMSDFLNPDDGPEPSGEFRVSPTFLIVLLGLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYSISN*
Ga0075419_1116930713300006969Populus RhizosphereVLAALVLAMSDFLNPDDGPEPSGEFRVSPTFVIVLLLLGFLIGTVGHIIKSRTLQISGVLLIFA
Ga0066710_10215050123300009012Grasslands SoilMARLDVLAQLPEQSGDFRVSPTIFIVLMFVGFLIGTFGHIIKARTLVAIGVALIFLATFALPLAVTLSH
Ga0105245_1002491313300009098Miscanthus RhizosphereMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0075418_1062315823300009100Populus RhizosphereMAQFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR*
Ga0066709_10100097123300009137Grasslands SoilMARLDVLAQLPEQSGDFRVSPTIFIVLMFVGFLIGTFGHIIKARTLVAIGVALIFLATFALPLAVTLSH*
Ga0114129_1030383633300009147Populus RhizosphereVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTVGHIIKSKTLQIAGVLLIFAATIFLPIAYSISN*
Ga0114129_1119169423300009147Populus RhizosphereVHAALAVLIADFLGGGGPNQSGDFRVSPTFFIVLLGLGFAIGTAGHIVKSRTLQAAGVLLVLAATVFLPIAYSVSR*
Ga0126307_1001679043300009789Serpentine SoilMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVIAGILLIFAATIFLPLAYSLSN*
Ga0126307_1008847723300009789Serpentine SoilMAQFLPDDGPGQSGDFRVSPTFFVALLGLGFLIGTLGHIVKSRTLVTAGILLIFAATIFLPLAYWLSN*
Ga0126307_1016630743300009789Serpentine SoilVLAALVPLLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTLGHIVKSRTLVAAGILLIFAATIFLPLAYTVSR*
Ga0126307_1044164713300009789Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATVFLPIAYTVSR*
Ga0126307_1050676123300009789Serpentine SoilVVAALVPVLAQFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGVLLIFAATIFLPIVYTVSR*
Ga0126307_1102791223300009789Serpentine SoilMAQFLPDDGPGQSGDFRVSPTFFVVLLGLGFLIGTLGHIIKSRTLVIAGILLIFASTVFLPLAYSLSN*
Ga0126313_1015941723300009840Serpentine SoilVLAVLVLAMSDFLNPDDGPEPSGEFRVSPTFLLVLLGLGFLIGTLGHLFRSRTLQAAGVLLVLAATIFLPIAYSVSR*
Ga0126313_1067938323300009840Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGVLLIFAATIFLPIVYTVSR*
Ga0126309_1000471623300010039Serpentine SoilVLAAIVSVTAQFLPDDGPGQSGDFQVSPTFFVVLLGLGFLIGTLGHIVKSRTLVAAGILLIFAATIFLPLAYSLSN*
Ga0126309_1002362143300010039Serpentine SoilVLAALVPLLADFLSPSDGPGQSGDFQVSPRFFLVLLGLGFVIGTAGHIVKSRTLVAAGILLIFAATIFLPLAYTVSR*
Ga0126309_1022704423300010039Serpentine SoilVAAALVVAISDFLNPDDGPDPSGDFRVSPTFLLVLLGLGFLIGTVGHIVKSRTLQAAGVILILAATIFLPIAYNVSR*
Ga0126309_1027933423300010039Serpentine SoilVHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFVIGTVGHIVRSRTLQAAGVLLVLAATVFLPIAYSVSR*
Ga0126309_1067483713300010039Serpentine SoilLAAVMADFLSPSDGPGQSGDFQVSPTFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATVFLPIAYTVSR*
Ga0126309_1075705013300010039Serpentine SoilVLAALVPLMADFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGVLLI
Ga0126308_1003799733300010040Serpentine SoilVVAALVLVLAQFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGVLLIFAATIFLPIVYTVSR*
Ga0126308_1073974623300010040Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFVIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR*
Ga0126308_1097501123300010040Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLILLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATVFLPIAYTVSR*
Ga0126308_1133409823300010040Serpentine SoilVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLVVLLLLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPV
Ga0126312_10002119133300010041Serpentine SoilVLAALVLVMADFLNPGEGPGQSGDFRVSPRFFLILLGLGFLIGTVGHIVKSRTLQAAGVLLIFAATIFLPIAYTVSR*
Ga0126314_1001122843300010042Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLILLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATIFLPIAYTVSR*
Ga0126310_1003744733300010044Serpentine SoilVVNSPLIRLAKDTFASVLAALAALADFLPGDGPGQSGEFRVSPTFFVVLLGLGFLIGTIGHVVRSRTLQAAGILLIFAATILLPVAYSVSH*
Ga0126310_1009823223300010044Serpentine SoilVPVALAAPIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTVGHIVKSRTLQAAGVLLVLAATVFLPIAYSVSR*
Ga0126310_1091090023300010044Serpentine SoilVLAALVLAMSDFLKPDDGPEPSGEFRVSPTFLVVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATSFLPVAFSISN*
Ga0126310_1131101413300010044Serpentine SoilMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFVIGTVGHIVKSRTLVAAGILLIFAATVFLP
Ga0126311_1156620723300010045Serpentine SoilVLAALVLAMSDFLKPDDGPEPSGEFRVSPTFLVVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATIFLPIAYSISN*
Ga0126311_1168145113300010045Serpentine SoilAHPARRILSPPVLAALVPLMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFVIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR*
Ga0137374_10006595133300012204Vadose Zone SoilVAAALVLVMADFLNPDEGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIVKSRTLQAAGVLLVLAATIFLPIAYSVSR*
Ga0137369_1018263733300012355Vadose Zone SoilRRSSVPKDTFALVAAALVLVMADFLNPDEGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIVKSRTLQAAGVLLVLAATIFLPIAYSVSR*
Ga0137368_1012886613300012358Vadose Zone SoilTRRSSVPKDTFAPVAAALVLVMADFLNPDEGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIVKSRTLQAAGVLLVLAATIFLPIAYSVSR*
Ga0137375_1028533013300012360Vadose Zone SoilVAAALVLVMADFLNPGEGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIVKSRTLQAAGVLLVLAATIFLPIAYSVSR*
Ga0157283_1031495923300012907SoilVHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTVGHIVKSRTLQTAGVLLVLAATVFLPIAYSVSR*
Ga0157307_112547723300013096SoilVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTAGHIIKSRTLQIAGILLIFAAT
Ga0163162_1247729813300013306Switchgrass RhizosphereAPVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK*
Ga0157372_1040841033300013307Corn RhizosphereMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFFPIAYSVS
Ga0075327_122028423300014272Natural And Restored WetlandsVLAALVVAMSDFLNPDDGPDQTGDFRVSPTFLLVLLGLGFLIGTLGHLFKSRTLQAAGILLIFAATIFLPIAYQVSR*
Ga0173483_1079260223300015077SoilVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTAGHIIKSRTLQIAGILLIFAATIFL
Ga0190266_1106732023300017965SoilVLAALVSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0184621_1011944123300018054Groundwater SedimentVLVALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILMIFAATIFLPLAYSLSN
Ga0184621_1031717923300018054Groundwater SedimentFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTAGHIFKSRTLVAAGILLIFAATIFLPIAYTVSH
Ga0184619_1016945723300018061Groundwater SedimentVLAALAVPIADFLGNDGPGQSGGFRVSPKFFIVLLGLGFLIGTIGHIIRSRTLQAAGIILIFAATIFLPIAYSVSR
Ga0184624_1047746323300018073Groundwater SedimentVLAALVSVMAQFLPDDGPGQSGDFRVSPMFFLVLLGLGFLIGTLGHIVKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0190265_10008461103300018422SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFLPLAYSITN
Ga0190265_1058714723300018422SoilDAGELVAHPTRRILSPLVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVIAGILLIFAATVFVPLAYTLSN
Ga0190265_1121134223300018422SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTLSN
Ga0190265_1222201723300018422SoilVLTALVVAMSDFLNPDDGPDPSGEFRLSPTFLIVLLGLGFLIGTIGHIVKSKTLQAAGILLIFAATIFLPIAYSISR
Ga0190265_1292109813300018422SoilALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIIKSKTLIAAGILLIFAATIFLPLAYSISN
Ga0190265_1386308123300018422SoilVLAALVPLMAQFLPDDGPGQSGDFRVSPTFFIVLLGLGFLIGTFGHIIKSKTLVAAGILLIFAATVFVPLYYSVSR
Ga0190272_1149129123300018429SoilSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0190272_1180602413300018429SoilVLAALVPVLAQFLPDDGPGQSGDFEVSPTFFVVLLGLGFLIGTIGHIIKSRALVAAGILLIFAATIFLPVAYTVSR
Ga0190275_1098524523300018432SoilVLAALVLAMSDFLSPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLVIAGILLIFAATVFLPLAYSVSN
Ga0190275_1342481313300018432SoilVPAALVLAMSDFLSPDDGPDPSGDFRVSPTFLIVLLGLGFLIGTVGHIVKSKTLQAAGILLILAPTIFLPIAYSISR
Ga0190275_1343146223300018432SoilVLAALVPVLAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVAAGILLIFAATVFLPIAYTVSR
Ga0190269_1064324413300018465SoilTRRSSGSKDTFAPVLAALVSLMADFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGILLIFAATIFLPLAYTVSR
Ga0190268_1003777623300018466SoilVVAALVPMLADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIIKSRTLVAAGILLIFAATIFLPLAYTVSR
Ga0190268_1010608813300018466SoilIRRILSAPVVAALVSVMAQFLPDDGPGQSGDFQVSPTFFVVLLGLGFLIGTLGHIIKSRTLVAAGILLIFAATIFVPLAYTLSN
Ga0190268_1094803913300018466SoilAPVLAALVLAMSDFLNPNDGPDPSGEFRVSPTFLIVLLGLGFLIGTAGHIIKSRTLQIAGILLIFAATIFLPIAYSISK
Ga0190268_1164129623300018466SoilVHAALVSVFAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPLAYTISR
Ga0190270_1003633223300018469SoilVLAAVVVAMSDFLSPDDGPDQTGDFRVSPTFLIVLLGLGFLIGTVGHIYKSRVLQAAGILLIFAATIFLPIAYSVSR
Ga0190270_1059204023300018469SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIIKSKTLIAAGILLIFAATIFLPLFYSVSR
Ga0190270_1142500723300018469SoilMAQFLPDDGPGQSGDFRVSPMFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0190270_1198502613300018469SoilPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILMIFAATIFLPLAYSLSN
Ga0190270_1270322413300018469SoilIREVADLAQALTRVVDTGELVAHPPRRILSPPVLAALVSVMAQFLPDDGPGQSGDFRASPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0190274_1375271313300018476SoilVPAALVPLLADFLGPNDGPGQSGDFQVSPRFFLILLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATVFLPIAYTVSR
Ga0190264_1050427523300019377SoilPDDGPGQSGDFEVSPTFFLVLLGLGFLIGTVGHIVKSRTLVASGILLIFAATIFVPLAYTISN
Ga0190264_1153427613300019377SoilVLAALVSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIF
Ga0190267_1002439933300019767SoilVLAALVSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFVPLAYTLSN
Ga0190267_1051553423300019767SoilVLGALVPLMADFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSH
Ga0190267_1101237213300019767SoilVVAALVSVMAQFLPDDGPGQSGDFQVSPTFFVVLLGLGFLIGTLGHIIKSRTLVAAGILLIFAATIFVPLAYTLSN
Ga0193741_107511623300019884SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTFGHIIKSKTLIAAGILLIFAATIFLPLAYSISN
Ga0193696_110145523300020016SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILMIFAATIFLPLAYSLSN
Ga0193696_110645423300020016SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIVKSKTLVAAGILLIFAATIFVPLAYTLSN
Ga0193738_102648433300020020SoilVPAVLLPMLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGILLIFAATIFLPLAYTVSR
Ga0193706_100735453300021339SoilVLAALVPVMADFLSPSDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSRTLVAAGILMIFAATVFLPIAYSVSN
Ga0222622_1121831823300022756Groundwater SedimentVLAALVPVLADFLNPGEGPGQSGDFRVSPTFFLVLLGLGFLIGTIGHIVKSRTLQAAGILLIFAATIFLPIAYSVSH
Ga0207874_108232423300025571Ionic Liquid And High Solid EnrichedVIALLLAQFLDPSRGPEQTGDFRVSPTFFVVLVLLGFLVGTFGHVISSKTLIIAGVTMIFAATVLLPLGLAIAH
Ga0207688_1051420823300025901Corn, Switchgrass And Miscanthus RhizosphereVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK
Ga0207689_1056681623300025942Miscanthus RhizosphereVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIALLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK
Ga0209818_122372113300027637Agricultural SoilVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLIVLLGLGFLIGTVGHIVKSRTLQIAGVLLIFAATIFLPLAYSISN
Ga0209387_104235733300027639Agricultural SoilVLAALVLAMSDFLSPDDGPEPSGDFRVSPTFLIVLLLLGFLIGTVGHIVKSKTLQIAGVLLIFAATIFLPIAYSISN
Ga0209382_1047249723300027909Populus RhizosphereVLAALVLAMSDFLNPDDGPEPSGEFRVSPTFLIVLLGLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYSISN
Ga0209382_1099209423300027909Populus RhizosphereVRAALVPLIAQFLSPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR
Ga0268264_1152912723300028381Switchgrass RhizosphereSKDTFAPVRAAVVLVMAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFLPIAYSVSK
Ga0307319_1013456913300028722SoilVHAALAVLIADFLGGGGPSQSGDFRVSPTFFLVLLGLGFLIGTLGHIVKSKTLVAAGILLIFAATIFVPLAYTLSN
Ga0307319_1018058023300028722SoilVLVALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFLPLAYSLSN
Ga0307318_1027841823300028744SoilVLAALVPLMADFLTPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPIAYTVSH
Ga0307318_1033580613300028744SoilQRGGLVREVADLAQALTRVVDTGELVAHPPRRILSAPVLAALVSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIVKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0307316_1014105123300028755SoilVLAAPVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILMIFAATIFLPLAYSLSN
Ga0307320_1002334623300028771SoilVLAALVSVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIVKSKTLIAAGILLIFAATIFVPLAYTISN
Ga0307320_1015882823300028771SoilMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFLTLAYSL
Ga0307302_1036503423300028814SoilVLAALVPVMADFLNPGEGPGQSGGFRVSPTFFLVLLGLGFLIGTVGHIVKARTLQAAGILLIFAATIFLPIAYSV
Ga0307296_1054976713300028819SoilVLAALVPVMADFLSPSDGPGQSGDFRVSPTFFLVLLGLGFLVGTLGHIVKSRTLVAAGILMIF
Ga0307300_1016083423300028880SoilVLAALVPVMAQFLPDDGPGQSGDFRVSPTFFLVLLGLGFLIGTLGHIIKSKTLIAAGILLIFAATIFLPLAYSLSN
Ga0247826_1131099623300030336SoilVRAAVVLVVAQFLNPDNGPEPSGGFRVSPTYLIVLLGLGFLIGTAGHLFKSRTLQAAGVLLILAATIFFPIAYSVSK
Ga0307408_10056720013300031548RhizosphereVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLVVLLLLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYS
Ga0307408_10141872113300031548RhizosphereVLAALVLAMSDFLTPDDGPEPSGEFRVSPTFLVVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATIFL
Ga0307405_1101559623300031731RhizosphereVLAALVLAMSDFLTPDDGPEPSGEFRVSPTFLVVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATIFLPIAYSISN
Ga0307405_1112783313300031731RhizosphereVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLVVLLLLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYSISN
Ga0307406_1110569923300031901RhizosphereVLAALVLAMSDFLNPDDGPDPSGEFRVSPTFLVVLLLLGFLIGTVGHIIKSRTLQIAGVLLIFAATIFLPIAYSI
Ga0307406_1119211523300031901RhizosphereHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTVGHIVKSRTLQAAGVLLVLAATVFLPIAYSISR
Ga0307409_10017050533300031995RhizosphereVHAALAVLIADFLGGGGPSQSGDFRVSPTFFIVLLGLGFAIGTVGHIVKSRTLQAAGVLLVLAATVFLPIAYSISR
Ga0307409_10068209823300031995RhizosphereMPMLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTIGHIVKSRTLVAAGILLIFAATIFLPIAYTVSR
Ga0307409_10177881213300031995RhizosphereMPMLAQFLPDDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGILLIFAATIFLPLAYTVSR
Ga0307409_10222112713300031995RhizosphereVLAALVPLMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATVFLPIAYTVSR
Ga0307409_10227702123300031995RhizosphereVLAALVLVMAQFLSPGEGPEQSGDFRVSPRFFLILLGLGFLIGTIGHIVRSRTLQAAGVLLIFAAT
Ga0307416_10020200923300032002RhizosphereVLAALVLVMAQFLSPGEGPEQSGDFRVSPRFFLILLGLGFLIGTIGHIVRSRTLQAAGVLLIFAATIFLPIAYTVSR
Ga0307416_10090773323300032002RhizosphereVLAALVLAMSDFLKPDDGPEPSGEFRVSPTFLIVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATIFLPVAYSISN
Ga0307411_1124698413300032005RhizosphereAALVLAMSDFLTPDDGPEPSGEFRVSPTFLVVLLLLGFVIGTLGHIIKSRTLQISGVLLIFAATIFLPIAYSISN
Ga0307415_10030022223300032126RhizosphereVLAALVPLMADFLGPNDGPGQSGDFQVSPRFFLVLLGLGFLIGTVGHIVKSRTLVAAGVLLIFAATVFLPIAYTLSR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.