NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F053937

Metagenome Family F053937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F053937
Family Type Metagenome
Number of Sequences 140
Average Sequence Length 65 residues
Representative Sequence MTWKRVATAVVLIPFVVGLVLWGSTAWVALALALVIVLALFEYFALGDAIGHRAYRFWTA
Number of Associated Samples 104
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.55 %
% of genes near scaffold ends (potentially truncated) 97.86 %
% of genes from short scaffolds (< 2000 bps) 89.29 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.857 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(37.857 % of family members)
Environment Ontology (ENVO) Unclassified
(36.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.857 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.64%    β-sheet: 0.00%    Coil/Unstructured: 36.36%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF01255Prenyltransf 51.43
PF00903Glyoxalase 14.29
PF01566Nramp 3.57
PF04191PEMT 1.43
PF03544TonB_C 0.71
PF01494FAD_binding_3 0.71
PF01433Peptidase_M1 0.71
PF03551PadR 0.71
PF04185Phosphoesterase 0.71
PF05163DinB 0.71
PF01569PAP2 0.71
PF13229Beta_helix 0.71
PF01148CTP_transf_1 0.71
PF12681Glyoxalase_2 0.71
PF13462Thioredoxin_4 0.71
PF04235DUF418 0.71
PF04542Sigma70_r2 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 51.43
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 3.57
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.43
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 0.71
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.71
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.71
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.71
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.71
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.71
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.71
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.71
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.71
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.71
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.71
COG2311Uncharacterized membrane protein YeiBFunction unknown [S] 0.71
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.71
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.71
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.71

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.86 %
UnclassifiedrootN/A2.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002917|JGI25616J43925_10230691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300002917|JGI25616J43925_10251387All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300003505|JGIcombinedJ51221_10337179All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300004080|Ga0062385_10333342All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae883Open in IMG/M
3300004152|Ga0062386_100495903All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae991Open in IMG/M
3300005166|Ga0066674_10416931All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae619Open in IMG/M
3300005167|Ga0066672_10102259All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1750Open in IMG/M
3300005184|Ga0066671_10068278All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300005187|Ga0066675_10122361All Organisms → cellular organisms → Bacteria1751Open in IMG/M
3300005536|Ga0070697_101015121All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae738Open in IMG/M
3300005536|Ga0070697_101294859All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae650Open in IMG/M
3300005538|Ga0070731_10100522All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1916Open in IMG/M
3300005553|Ga0066695_10885645All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300006046|Ga0066652_100121612All Organisms → cellular organisms → Bacteria2144Open in IMG/M
3300006794|Ga0066658_10258732All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300006800|Ga0066660_11073939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300007258|Ga0099793_10003547All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5426Open in IMG/M
3300007258|Ga0099793_10015914All Organisms → cellular organisms → Bacteria3009Open in IMG/M
3300007258|Ga0099793_10363125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300007258|Ga0099793_10637485Not Available535Open in IMG/M
3300007265|Ga0099794_10266746All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300007788|Ga0099795_10647914All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300009038|Ga0099829_10506327All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300009038|Ga0099829_10959741All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300009038|Ga0099829_11423889All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300009089|Ga0099828_10903435All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300009090|Ga0099827_10057840All Organisms → cellular organisms → Bacteria → Acidobacteria2943Open in IMG/M
3300009090|Ga0099827_10340845All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300009090|Ga0099827_11713317All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300009143|Ga0099792_10011247All Organisms → cellular organisms → Bacteria → Acidobacteria3773Open in IMG/M
3300010048|Ga0126373_10442102All Organisms → cellular organisms → Bacteria → Acidobacteria1333Open in IMG/M
3300010343|Ga0074044_10265553All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300010343|Ga0074044_10905435All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300010358|Ga0126370_11726976All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300010359|Ga0126376_12260518All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300010360|Ga0126372_10531354All Organisms → cellular organisms → Bacteria → Acidobacteria1112Open in IMG/M
3300010360|Ga0126372_11273562All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300011269|Ga0137392_10042521All Organisms → cellular organisms → Bacteria3376Open in IMG/M
3300011269|Ga0137392_11431070All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300011269|Ga0137392_11497471All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300011270|Ga0137391_10158929All Organisms → cellular organisms → Bacteria1970Open in IMG/M
3300011270|Ga0137391_10491084All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300011271|Ga0137393_10424038All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300011271|Ga0137393_10597037All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012096|Ga0137389_10133562All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300012096|Ga0137389_11234696All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300012096|Ga0137389_11576719All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300012189|Ga0137388_10265395All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1566Open in IMG/M
3300012189|Ga0137388_10601462All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300012200|Ga0137382_10460977All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300012200|Ga0137382_11088294All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012202|Ga0137363_10449696All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter1078Open in IMG/M
3300012202|Ga0137363_10719220All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300012203|Ga0137399_10539744All Organisms → cellular organisms → Bacteria → Acidobacteria979Open in IMG/M
3300012205|Ga0137362_10586965All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300012207|Ga0137381_11165792All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300012207|Ga0137381_11611810All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012285|Ga0137370_10662732All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300012285|Ga0137370_10664676All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300012349|Ga0137387_10553837All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300012361|Ga0137360_11526669All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300012362|Ga0137361_10689774All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300012363|Ga0137390_11173112All Organisms → cellular organisms → Bacteria → Acidobacteria716Open in IMG/M
3300012363|Ga0137390_11675156All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012582|Ga0137358_10719863All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300012582|Ga0137358_10900413All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300012685|Ga0137397_10066155All Organisms → cellular organisms → Bacteria2612Open in IMG/M
3300012918|Ga0137396_10356053All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1083Open in IMG/M
3300012922|Ga0137394_10853260All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300012948|Ga0126375_12027824All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300012971|Ga0126369_10405085All Organisms → cellular organisms → Bacteria1403Open in IMG/M
3300013306|Ga0163162_12382619All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300015054|Ga0137420_1247789All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300015374|Ga0132255_102297489All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300016270|Ga0182036_10913596All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300016319|Ga0182033_10651795All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300017933|Ga0187801_10523606All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300018086|Ga0187769_10896680All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300018468|Ga0066662_10526649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1085Open in IMG/M
3300019877|Ga0193722_1141518All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300020010|Ga0193749_1015919All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300020579|Ga0210407_10374250All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300020579|Ga0210407_10542117All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300020579|Ga0210407_10887307All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300020579|Ga0210407_11226772All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300020581|Ga0210399_10125330All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300020581|Ga0210399_10420588All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300020581|Ga0210399_10825397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium756Open in IMG/M
3300020583|Ga0210401_11177451All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300021086|Ga0179596_10597108All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300021088|Ga0210404_10515186All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300021170|Ga0210400_10824037All Organisms → cellular organisms → Bacteria → Acidobacteria760Open in IMG/M
3300021170|Ga0210400_11154060All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300021171|Ga0210405_10307616All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300021171|Ga0210405_10332276All Organisms → cellular organisms → Bacteria → Acidobacteria1200Open in IMG/M
3300021178|Ga0210408_11494654All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300021402|Ga0210385_10396870All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300021407|Ga0210383_10634016All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300021474|Ga0210390_10318411All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1317Open in IMG/M
3300021474|Ga0210390_10411221All Organisms → cellular organisms → Bacteria → Acidobacteria1143Open in IMG/M
3300021478|Ga0210402_11635059All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300021479|Ga0210410_11342840All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300021559|Ga0210409_11731664All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300024179|Ga0247695_1061810All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300024182|Ga0247669_1076830All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300024330|Ga0137417_1438594All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300026035|Ga0207703_12151496All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300026277|Ga0209350_1140842All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300026317|Ga0209154_1051697All Organisms → cellular organisms → Bacteria1829Open in IMG/M
3300026322|Ga0209687_1078325All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300026326|Ga0209801_1001163All Organisms → cellular organisms → Bacteria → Acidobacteria16535Open in IMG/M
3300026361|Ga0257176_1087177All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300026377|Ga0257171_1068996All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300027370|Ga0209010_1011856All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300027729|Ga0209248_10036432All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii1527Open in IMG/M
3300027829|Ga0209773_10377248All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300027846|Ga0209180_10034680All Organisms → cellular organisms → Bacteria2733Open in IMG/M
3300027846|Ga0209180_10568821All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300027862|Ga0209701_10695502All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300027867|Ga0209167_10728269All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300027869|Ga0209579_10226368All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300028047|Ga0209526_10815757All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300028047|Ga0209526_10989603All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300028536|Ga0137415_10776951All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300028906|Ga0308309_11254228All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300029999|Ga0311339_10673660All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300030057|Ga0302176_10159348All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300030399|Ga0311353_10653456All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300031715|Ga0307476_10069375All Organisms → cellular organisms → Bacteria → Acidobacteria2441Open in IMG/M
3300031720|Ga0307469_12466931All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300031753|Ga0307477_10575582All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300031753|Ga0307477_10690308All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300031754|Ga0307475_10105559All Organisms → cellular organisms → Bacteria2203Open in IMG/M
3300031754|Ga0307475_11243417All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300031820|Ga0307473_10746774All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300031823|Ga0307478_11386586All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300031910|Ga0306923_11259977All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300034177|Ga0364932_0311172All Organisms → cellular organisms → Bacteria595Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil37.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.14%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.43%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.43%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.43%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.71%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25616J43925_1023069123300002917Grasslands SoilMTWKRVATAAVLIPFAVGIVLWGSTALLALVVALVTLLALFEYFALGEAIGHRAYRFWAASCALLLLYFQWLT
JGI25616J43925_1025138713300002917Grasslands SoilMTWKRVATAAVLIPFAVGIVLWGSTALLALVVALVTLLALFEYFALGEAIGHRAYRFWTG
JGIcombinedJ51221_1033717913300003505Forest SoilMTWKRVATAAVLIPFVVGLVLLGSTAWVAAGTALIVVLALREYFGLGDAIGHRAYRVWTTACAI
Ga0062385_1033334213300004080Bog Forest SoilMTWKRIATAAVLIPSVVALVLWGSTAVVAIGTALVILLSLSEYFALGDAIGHRAYRFWTATCSLLLVFVQWWTARFPL
Ga0062386_10049590313300004152Bog Forest SoilMTWKRVATAAVLIPFVVGLVLFGSTAWVAVGTALIIVLALREYFGLGDAIGHRGYRIWTTACAILLVYTQWVV
Ga0066674_1041693123300005166SoilMTWKRVATAVVLVPFAVGLLLWGSTAIVSIAVALVTLLALFEYFALGEAIGHRGYRF
Ga0066672_1010225913300005167SoilMTWKRVATAAVLIPIVVGIVLWGSTAVMALALALVIPLALFEYFALGEAIGHRAYRFWTATC
Ga0066671_1006827833300005184SoilMTWKRVVTAALLIPFAVGLALWSSTAVLALALALVVMIALFEYFSLGDAIGHRAY
Ga0066675_1012236113300005187SoilMTWKRVATAALLIPFAVGLALWSSTAVLALALALVVMIALFEYFSLGDAIGH
Ga0070697_10101512123300005536Corn, Switchgrass And Miscanthus RhizosphereMTWKRVATAVVLIPCVVGLVLWGSTAVVALGIALVITLALFEYFALGDAIGHRAYRFW
Ga0070697_10129485913300005536Corn, Switchgrass And Miscanthus RhizosphereMTWKRVATAAVLIPIVVGLVLWASTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATCALLLVYVQWLLS
Ga0070731_1010052213300005538Surface SoilMTWKRVVTAAVLIPFVVGLVLYASTAWVAMALAAIIVLAMIEYFALGDAIGHRPYRVWTLLCGVLLVY
Ga0066695_1088564513300005553SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVATVTLLALFEYFALGEAIGHRAYRFWTATCALLLIYAQW
Ga0066652_10012161213300006046SoilMTWKRVATAAVLIPFVVSLVVRGSTAIVALAVALVTLLALFEYFALGQAIGHRAYRFWTATC
Ga0066658_1025873213300006794SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVATVTLLALFEYFALGEAIGHRAYRFWTATCALLLIYAQWLATNWPAD
Ga0066660_1107393913300006800SoilMTWKRVATAVVLIPFVVGIVLSRSTALLALAVALVTLLALFEYFALGDAIGHRAYRFWTATCAL
Ga0099793_1000354763300007258Vadose Zone SoilMTWKRVATAVVLIPFVVGLVVRGSTAIVALAVGLVTLVALFEYFALGEAIGHRA
Ga0099793_1001591413300007258Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAVMALAVALVTLLALFEYFALGEAIGHRAYRFWTGTC
Ga0099793_1036312513300007258Vadose Zone SoilMTWKRVATAAVLIPLAVGLVLRGSTALLTLAVALVTMLALFEYFALGEAIGHRAYR
Ga0099793_1063748513300007258Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWCSTALLALGLALVVMLAMFEYFALGDAIGQRAYRF
Ga0099794_1026674613300007265Vadose Zone SoilMTWKRVATAVVLIPFVVGIVLWGSTAIVALAVGLVTLLALFEYFALGEAIGHRAYRFWTATCALLLI
Ga0099795_1064791423300007788Vadose Zone SoilMTWKRVATAVVLIPFVVGIVLWGSTAIVALAVALATLLALFEYFALGEAIGHRAYRFWTA
Ga0099829_1050632713300009038Vadose Zone SoilMTWKRVATAVVLIPFVVGIVLWGSTAIVALAVGLVTVLALFEYFALGEAIGHRAYRFWTASCALLIIYLQWLT
Ga0099829_1095974123300009038Vadose Zone SoilMTWKRVATAAVLIPLVVAIVLWGSTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATC
Ga0099829_1142388913300009038Vadose Zone SoilMTWKRVATAGVLIPFVVGIVLWGSTAIVALAVGLVTMLALFEYFALGEAIGHRAYRFWTG
Ga0099828_1090343523300009089Vadose Zone SoilMTWTRVATAAVLIPFVVGIVLWGSTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATCALVL
Ga0099827_1005784013300009090Vadose Zone SoilMTWKRVATAGVLIPFAVGLILWGSMALLALAMALVTLLALFEYFALGAAIGHRAHRFWTATCALLLIFVQWLMADE
Ga0099827_1034084523300009090Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAWVALALALIILLALFEYFALGDAIGH
Ga0099827_1171331713300009090Vadose Zone SoilMTWTRVATAAVRIPFVVGIVLWGSTAWVALALALIILLALFEYFALGDAIGH
Ga0099792_1001124743300009143Vadose Zone SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLAVFEYFSLGEAIGHRAYRLWTAFCA
Ga0126373_1044210213300010048Tropical Forest SoilMVMVPVAVGLVLWGSTAIVAIATALVTLLALFEYFALGDAIGLRAYRFWTATCALLLIYAQWRATSAP
Ga0074044_1026555313300010343Bog Forest SoilMTWMRVATAAVLIPCVVGLVLWGSTAAMAVGLALVMLIALFEYFAMGDAIGHRAYRFWTATCA
Ga0074044_1090543513300010343Bog Forest SoilMTWTRVATAAVLIPLAAGAVLLGSTPVLALAVALVMLLALFEYFSLGEAIGHRAYRFWTTTCALLFVYSQYAMTVAPRLGYLR
Ga0126370_1172697613300010358Tropical Forest SoilMTWKRVATAVVLIPGVVALILMGSTALVALGLTLVILLALFEYFNLGDAIGHRAYKFWTAACTIAIV
Ga0126376_1226051813300010359Tropical Forest SoilMTWKRVLTAAVLIPLTVALVLWGSTAWVALATALVTLLALFEYFSLGELIGHRAYRFWAATCALMLVYVQWVAATERI
Ga0126372_1053135413300010360Tropical Forest SoilMTWKRVATAVVLIPGVVALILWGSTALVAIGMALVILVALFEFFSLGDAIGHRAYKYWTATCAIAIVYVQWLQ
Ga0126372_1127356213300010360Tropical Forest SoilMTWKRVATALVLIPAVIGLVLGARTAWVASALTAVMLLALFEYFALGEAIGHRAYK
Ga0137392_1004252143300011269Vadose Zone SoilMTWKRVATSAVLIPFVVGIVLWGSTAVMALAVALMTLLALFEYFALGEAIGHRAYRFWTASCALTLIFVQWFARVE
Ga0137392_1143107013300011269Vadose Zone SoilMTWKRVATAVILIPFVVGLVLWGSTAWVALALALIIVLALFEYFALGDAIGHRAYRFWTAACAF
Ga0137392_1149747113300011269Vadose Zone SoilMTWKRLATAAVLIPLVVGMVLWGSTAWLALALALVILLALFEYFALGDAIGHRAYRFWTATCALILVYVQWVSA
Ga0137391_1015892933300011270Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAVMALAVALMTLLALFEYFALGEAIGHRAYRFWTASCALTL
Ga0137391_1049108433300011270Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVWGSTAIVALAVALVTMLALFEYFALGEAIGHRAYRFW
Ga0137393_1042403813300011271Vadose Zone SoilMTWKRVATAGVLIPFVVGIVSWGSTAIVALAVGLVTLLALFEYFALGEAIGHRAYRFWTATCALLLIFVQWLMA
Ga0137393_1059703723300011271Vadose Zone SoilMTWKRVATAVVLIPVVVGLVLWGSTAWVALALALIIVLALFEYFALGDAIGHRAYRFWTA
Ga0137389_1013356233300012096Vadose Zone SoilMTWKRVVTAAVLIPFVVSLVLWGSTAILALGLALVVMLAMFEYFALGDAIGHRAYRFWTASCALILIYAQWLASTMPSDYPAEW
Ga0137389_1123469623300012096Vadose Zone SoilMTWKRVATAAVLILFVVGFVWWVSTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATCALVLVYVQ
Ga0137389_1157671913300012096Vadose Zone SoilMTWKRVATAVILIPFVVGLVLWGSTAWVALALALIIVLALFEYFALGDAIGHRAYRFWTAACAFL
Ga0137388_1026539533300012189Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVWGSTAWVALALALVVVLALFEYFSLGDAIGHRAYRFWTA
Ga0137388_1060146213300012189Vadose Zone SoilMTWKRVATAGVLIPFVVGIVLWGSTAIVALAVGLVTMLALFEYFALGEAIGHRAYRFWTGTCALLLVFTQW
Ga0137382_1046097713300012200Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVAMVTLLALFEYFALGEAIGHRAYRFWTATC
Ga0137382_1108829423300012200Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVATVTLLALFEYFALGEAIGHRAYRFWTATCALL
Ga0137363_1044969623300012202Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILALGVALVVMLAMLEYFALGDAIGHRAYRFWTASCALILIYAQWLAS
Ga0137363_1071922023300012202Vadose Zone SoilMTWKRVVTALVLIPFVVALVLRGSTALVSLAVALVMLLALFEYFALGEAIGHRAYRFWTATCALVMVYV
Ga0137399_1053974423300012203Vadose Zone SoilMTWKRVVTAAVLIPFVVGLVLWGSTAFLALGLALVVMLAMFEYFALGDAIGHCAYRFWTTCCALILIYAQ
Ga0137362_1058696513300012205Vadose Zone SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLAVFEYFSLGEAIGHRAYRLWTAFCATLLV
Ga0137381_1116579213300012207Vadose Zone SoilMTWKRVATAAVLIPFAVGIALWGSTALLALAVALVTLLALFEYFALGEAIGHRAYRFWTGTCALLLVFAQWNAPTQ
Ga0137381_1161181023300012207Vadose Zone SoilMTWKRVATAAVLIPCVGGLVLAAPTYLVAIALAAVILLATFEYFSLGEAI
Ga0137370_1066273223300012285Vadose Zone SoilMTWKRVATAAVLIPFVVSLVVRGSTAIVALAVALVTLLALFEYFALGQAIGHRAYRFW
Ga0137370_1066467623300012285Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVALVTLLALFEYFALGQAIGHRAYRFW
Ga0137387_1055383713300012349Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVRGSTAIVALAVALVTLLALFEYFALGQAIGHRAY
Ga0137360_1152666913300012361Vadose Zone SoilMTWKRVVTALVLIPFVVALVLWGSTALVSLAVAMVTLLALFEYFALGEAIGHRAYRFWTATCALVMVYVQWRAAVA
Ga0137361_1068977413300012362Vadose Zone SoilMTWTRVATAAVLIPCVVGLVVWGSTAWVALALALVVVLALFEYFSLGDAIGHR
Ga0137390_1117311213300012363Vadose Zone SoilMTWKRVATAAVLIPLVVAIVLWGSTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATCALILVYVQWVSAVEP
Ga0137390_1167515623300012363Vadose Zone SoilMTWKRVATAGVLIPFAVGLILWSSTALLALAMALVTLLALFEYFALGAAIGHRAYRFWTA
Ga0137358_1071986323300012582Vadose Zone SoilMTWKRVVTAAVLIPFAVGIVLWGSTALLALAVALVTMLALFEYFALGEAIGHRAYRFWTASCALLV
Ga0137358_1090041313300012582Vadose Zone SoilMTWKRVATAAVLIPFVVGIVLWGSTAIVALAVGLVTMLALFEYFALGEAIGHRAYR
Ga0137397_1006615523300012685Vadose Zone SoilMTWKRVATAVVLIPFVVGIVLWGSTAIVALAVGLVTVLALFEYFALEEAIKHRAYRF*
Ga0137396_1035605313300012918Vadose Zone SoilMTWKRVATAGVLIPFVVGIVLWGSTAIVALAVGLVTLLALFEYFALGEAIGHRGYRFWTASCALMLIFVQWYSRIDLAAFRLPR
Ga0137394_1085326013300012922Vadose Zone SoilMTRKRVATAAVLIPFVVAIVLRGSTAVMALAVALVTLLALFEYFALGEAIGHRAYRFWTA
Ga0126375_1202782423300012948Tropical Forest SoilMTWKRIVTAVLLIPAVVGLVLAARTAWVAVAMSGVMLLAMFEYFALGDAIGHRAYKLWTAFCACLLMYAQY
Ga0126369_1040508533300012971Tropical Forest SoilMTWKRVATAVVLIPGVVALILMGSTALVALGLALVILLALFEYFNLGDAIGHRAYKFWTAACTIAIVYVQWLQVVLRQ
Ga0163162_1238261923300013306Switchgrass RhizosphereMTWKRVATAALLIPAVVGLVLEAPTGGIAVAMAGVMLLAMFEFFAMGDAIGHRGYKFWTAICACLLVFAQYLAAMEYA
Ga0137420_124778923300015054Vadose Zone SoilMTWKRVATAAVLIPLVVGLVLWTTTAIVALGLALVVMLAMFEYFALGEAIGHRAYRFWTASCALVLI
Ga0132255_10229748923300015374Arabidopsis RhizosphereMTWKRVATAALLIPAVVGLVLEAPTGGIAVAMAGVMLLAMFEFFAMGDAIGHRGYKFWTAICACLLV
Ga0182036_1091359623300016270SoilMTWKRVATAVILIPVVVGLVLLAPPSWLAIVLALLVLLALFEYFALGEAIGHR
Ga0182033_1065179523300016319SoilMTWKRVATAIVLIPGVVALVSAAPTSWLAIVLALIILLALFEYFALGDAIGHRAYRLWTASCACLLVFVQ
Ga0187801_1052360613300017933Freshwater SedimentMTWKRLVTAAVLIPFAVGIVLWGSTAVLALAVALVTMLALFEYFALGEAIGHRAYRYWTASCAVLLIF
Ga0187784_1007217413300018062Tropical PeatlandMMWKRVATAVVLMPVAIALVLWGSATVVAAAVAALTAVALWEYFALGEAIGHRAY
Ga0187769_1089668013300018086Tropical PeatlandMTGKRVATAVVLMPLAIALVLWGSTTLLALAVAVLTVVALWEYFGLGEAIGHRAYRVWTTICAVLLIFQQAG
Ga0066662_1052664913300018468Grasslands SoilMTWKRVATAAVLIPFAVGIVLWGSTAIVALAVGLVTMLALFEYFALGEAIGHRAYRFWT
Ga0193722_114151813300019877SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLAVFEFFSLGEAIGHRAYRLWTAFCATLLVYMQY
Ga0193749_101591933300020010SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLAVFEYFSLGEAIGHRAYRLWTACCATLLV
Ga0210407_1037425023300020579SoilMTWKRVVTAAVLIPFAVGIVLWGSTAVLALAVALVTMLALFEYFALGEAIGHRAYRFWTASCA
Ga0210407_1054211713300020579SoilMTWKRVATAVVLIPFVMGLVLRGSTAWVALALALIIVLALFEYFALGDAIGHR
Ga0210407_1088730723300020579SoilMTWKRVATAVVLIPFVVGLVLWGSTAWLALALALVIVLALFEYFALGDAIGHRAY
Ga0210407_1122677223300020579SoilMTWKRVVTAAVLIPFAVGIVLWGSTAMLALAVALVTLLALFEYFALGEAIGHRAYRFWTATCALLI
Ga0210399_1012533033300020581SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALALALVIVLALFEYFALGDAIGHRAYRFWTA
Ga0210399_1042058833300020581SoilMTWKRVVTAAVLIPFAVGIVLWGSTALLALAVALVSLLALFEYFALGEAIGHRAYR
Ga0210399_1082539723300020581SoilMTWKRVATAAVLIPFAVGLVLWGSTAIVALVVGLVMMLAMFEYFALGEAIGHRAYRFWTVSCALLLIFAQWFAT
Ga0210401_1117745113300020583SoilMTWKRVATAAVLIPCVVFLVLWCSTPVMAVALALVILLALFEYFALGDAIGHRAYRFWTA
Ga0179596_1059710813300021086Vadose Zone SoilMTWKRVATAAVLIPCVVGLVLGAPTALVAVALALVILLAVFEYFSLGEAIGHR
Ga0210404_1051518613300021088SoilMTWKRVATAVVLIPFVVGLVVWGSTAIVSLAVALLTMLALFEYFALGEAIGHRAYRFWTTTCALIL
Ga0210400_1082403713300021170SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALVLALIIALALFEYFALGDAIGHRAYRFW
Ga0210400_1115406013300021170SoilMTWKRVATAAVLIPFVVGIVLWGSTAMVALAVALVTMLALFEYFALGEAIGHRAYRFWTA
Ga0210405_1030761623300021171SoilMTWKRVATAAVLIPCVVGLVLWGSTAAMAIGVAFVILLALFEYFALGDAIGHRAYRFWTATCALGLVYVQWWTASLGMFGYIGIARKDSPTIQSLD
Ga0210405_1033227613300021171SoilMTWKRVATAAVLIPFAVGIVLWGSTAVLALVVGLVTLLALFEYFALGEAIGHRAYRFWTASCA
Ga0210408_1149465413300021178SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALALALIIVLALFEYFGLGEAIGHRAYRFWTATCALLLVYVQWLTAAE
Ga0210385_1039687013300021402SoilMTWKRVATAAVLIPFVVGLVLLGSTAWVAAGTALIVVLALREYFGLGDAIGHRAYRV
Ga0210383_1063401623300021407SoilMTWKRVATAAVLIPFVVGLVLLGSTAWVAAGTALIVVLALREYFGLGDAIGHRASRVWPT
Ga0210390_1031841133300021474SoilMTWKRVATAAVLIPCVVGLVLWGSTAAMALGLALVMLLALFEYFALGDAIGHRAYRFWTATCALGLVYVQWWTASLGMFGYVGIARK
Ga0210390_1041122113300021474SoilMTWKRVATAAVLIPFVVGLVLWGSTAAMAVGLALVMLLAVFEYFALGDAIGHRAYRFWTATCALGLVYVQWWTASLGMFGYVGIAR
Ga0210402_1163505913300021478SoilMTWKRVATAAVLIPLVVGLVVFGSTAWVAVATALVIEIALFEYFSLGDAIGHRAYRFWTASCA
Ga0210410_1134284023300021479SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALALALIIVLALFEYFGLGEAIGHRAYRFWTATCALLL
Ga0210409_1173166423300021559SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALALALVIVLALFEYFALGDAIGQRAY
Ga0247695_106181023300024179SoilMTWKRVATAVVLIPCVIGLVLWGSTAVVALGLALVIALALFEYFALGDAIGHRAYRFWTATCALALVYVQWLAAIAPSY
Ga0247669_107683023300024182SoilMTWKRVATAVVLIPCVVGLVLWGSTAVVALGSALVIALALFEYFALGDAIGHRAYRFWTATCALALV
Ga0137417_143859413300024330Vadose Zone SoilMTWKRVATAGCADSVRRGLVLWGSTAIVALAVALVTLLALFEYFALGEAIGHRAYRF
Ga0207703_1215149613300026035Switchgrass RhizosphereMTWKRVATAVVLIPAVVGLVLAARTAWVAVALSGVMLLALFEYYALGDAIGHRAYKVWTA
Ga0209350_114084223300026277Grasslands SoilMTWKRVATAAVLTPFAVGLALWSSTAVLALALALVVMIALFEYFSLGDAIGHRA
Ga0209154_105169733300026317SoilMTWKRVATAAVLIPIVVGIVLWGSTAVMALALALVIPLALFEYFALGEAIGHRAYRFWTATCVL
Ga0209687_107832513300026322SoilMTWKRVATAAVLVPLVVSLVLWGSTAVVAMAIALFTLLALFEYFALGEAIGHRAYRFWTGICALLLIY
Ga0209801_1001163123300026326SoilMTWKRVATAVVLIPFVVGIVLWGSTAILALAVGLVTLLALFEYFTLGDAIGHRAYRFWTASCALLLI
Ga0257176_108717713300026361SoilMTWKRVATAAVLIPFVVGLVLRGSTTMVSFALALVMLLALFEYFALGEAIGHRAYRFW
Ga0257171_106899613300026377SoilMTWKRVVTAAVLIPFVVGLVLWGSTAILSLGVALVVMLAMFEYFALGDAIGHRAYRFWTASC
Ga0209010_101185633300027370Forest SoilMTWKRVATAVVLIPFVVGLVLYASTGWVAVSLAAIIVLAMIEYFALGDAIGHRAYSVW
Ga0209248_1003643223300027729Bog Forest SoilMTWTRVATAAVLIPLAAGVVLWGSTAVLALAVALVMLVALFEYFALGEAIGHRAYRFWTATCALLMVYLQWLTTVAWRGDLGG
Ga0209773_1037724813300027829Bog Forest SoilMTWKRVATAAVLIPCVVGLVLWGSTAFVAMGTALVILLALFEFFTLGDAIGHRAYRFWTAGCALALVYVQWLATIAPA
Ga0209180_1003468013300027846Vadose Zone SoilMTWKRVATAAVLIPFVVGIVSWGSTAIVALAVGLVTLLALFEYFALGEAIGHRAYRF
Ga0209180_1056882123300027846Vadose Zone SoilMTWKRVATAAVLIPFVVGLVVWGSTAIVALAVALVTLLALFEYFALGEAIGHRAYRFWTATCSIV
Ga0209701_1069550213300027862Vadose Zone SoilMTWTRVATAAVLIPFVVGIVLWGSTAWVALALALIILLALFEYFALGDAIGHRAYRFWTATCA
Ga0209167_1072826913300027867Surface SoilMTWKRVATAAVLIPCVVGLVLWGSTGVMAIGLALVMLLALFEYFALGDAIGHRAYRFWTATCALGLVYVQ
Ga0209579_1022636823300027869Surface SoilMTWKRVVTAAVLIPFVVGLVLYASTAWVAMALAAIIVLAMIEYFALGDAIGHRPYRVWTLLCGVLLVYVRW
Ga0209526_1081575713300028047Forest SoilMTWKRVATAAALIPFVVGLVLFGSTAWVSVALALVIVLALLEYFSLGDAIGHRAYKVWTVLCAIFLVYAQWVATQLL
Ga0209526_1098960323300028047Forest SoilMTWKRVATAAVLIPFVVGIVLWASTAWVALVLALIIVLALFEYFALGNAIGHRAY
Ga0137415_1077695123300028536Vadose Zone SoilMTWKRVATAVVLIPFVVGLVVWGSTAIVALAVALVTLLALFEYFALGEAIGHRAYRF
Ga0308309_1125422823300028906SoilMTWKRIATAAVLIPCVVGLVLWGSTAFVAIGTAFVILLALFEYFAMGDAIGHRAYRFWTATCALILVFVQWLASSHDDAFIGAR
Ga0311339_1067366023300029999PalsaMTWKRVATAAVLIPFVVFLVLRGSTAVIALASGVFMVLALLEYFALGEAIGHRAHRAWTIFCALVLLFLQWLP
Ga0302176_1015934823300030057PalsaMTWKRVATAAVLIPFVVFLVLRGSTAVIALASGVFMVLALLEYFALGEAIGHRAHRAWTIFCALVLLFLQWLPTVVR
Ga0311353_1065345623300030399PalsaMTWKRVATAAVLIPFVVFLVLRGSTAVIALASGVFMVLALLEYFALGEAIGHRAHRAWTIFCALVLLFLQWLPTV
Ga0307476_1006937533300031715Hardwood Forest SoilMTWKRVATAAVLIPFAVGIVLWGSTAVVALALALVTLLALFEYFALGEAIGHRAYRFWTGGCALLLVYVQWLATVA
Ga0307469_1246693113300031720Hardwood Forest SoilMTWTRVATAAVLIPFVVGLVVWGSTAWVALALAIVVVLALFEYFSLGDAIGHRAYRF
Ga0307477_1057558223300031753Hardwood Forest SoilMTWKRVATAAVLIPFVVGIVLWGSTAVMALAVALVTMLALFEYFALGEAIGHRAY
Ga0307477_1069030823300031753Hardwood Forest SoilMTWKRVATAAVLIPFAVGIVLWGSTAVVALALALVTLLALFEYFALGEAIGHRAYRFWTGGCALLLVYVQWLAT
Ga0307475_1010555913300031754Hardwood Forest SoilMTWKRVATAAVLIPFVLGIVLWGSTAILALAVGLVTLLALFEYFALGEAIGHRAYRFWTATCALM
Ga0307475_1124341713300031754Hardwood Forest SoilMTWKRVATAVTLIPFVVGLVLWGSTAWVALAVALIIVLALFEYFALGDAMGHRAYRF
Ga0307473_1074677423300031820Hardwood Forest SoilMTWKRVATAVVLIPFVVGLVLWGSTAWVALAIALIIVLALFEYFALGDAIGQRAYRFW
Ga0307478_1138658623300031823Hardwood Forest SoilMTWKRVATAAVLIPFAVGIVLWGSTAVVALALALVTLLALFEYFALGEAIGHRAYRFWTG
Ga0306923_1125997723300031910SoilMTWKRVATAIVLIPGVVALVSAAPTSWLAIVLALIILLALFEYFALGDAIGHRAYRLWT
Ga0310910_1002015443300031946SoilMTWKRVATALVLIPAVIGLVLGARTAWVAVAGTVVMLLALREYFVLGDAIGHRAYKAWTAVCACLLMVAQY
Ga0364932_0311172_422_5953300034177SedimentMTWKRVLTAAVLVPAMTGLVLLGTTGAVAVGVAAITLAALFEYFALGEEIGQRAYRFW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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