Metagenome / Metatranscriptome Family F054084

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054084
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	53 residues
Representative Sequence	MPLSSEAQEWNARQARASEYYATEGRALRDIERELREIRLLLAALSKHFGVRA
Number of Associated Samples	74
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.57 %
% of genes near scaffold ends (potentially truncated)	14.29 %
% of genes from short scaffolds (< 2000 bps)	84.29 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (57.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (75.000 % of family members)
Environment Ontology (ENVO)	Unclassified (95.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02467	Whib	31.43
PF13392	HNH_3	10.00
PF13730	HTH_36	3.57
PF02086	MethyltransfD12	2.14
PF05866	RusA	1.43
PF03796	DnaB_C	0.71
PF14192	DUF4314	0.71
PF00145	DNA_methylase	0.71
PF07728	AAA_5	0.71
PF03237	Terminase_6N	0.71
PF01507	PAPS_reduct	0.71
PF12705	PDDEXK_1	0.71
PF06067	DUF932	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	2.14
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	2.14
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.43
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.71
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.71
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
All Organisms	root	All Organisms	42.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
cellular organisms	root	All Organisms → cellular organisms	25.71 %
Viruses	superkingdom	All Organisms → Viruses	16.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.29 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	3.57 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	3.57 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.14 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.14 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.14 %
uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.14 %
uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Rhodococcus erythropolis group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.14 %
uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Rhodococcus erythropolis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.14 %
uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Rhodococcus erythropolis SK121	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	5.71 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.14 %
uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	2.14 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001721\|JGI24528J20060_1002784	Not Available	1278	Open in IMG/M
3300001731\|JGI24514J20073_1009501	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300001735\|JGI24520J20079_1007770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300001739\|JGI24658J20074_1003758	Not Available	2364	Open in IMG/M
3300001743\|JGI24515J20084_1000212	All Organisms → cellular organisms → Bacteria	4544	Open in IMG/M
3300001743\|JGI24515J20084_1007698	Not Available	982	Open in IMG/M
3300002511\|JGI25131J35506_1001592	All Organisms → Viruses → Predicted Viral	3425	Open in IMG/M
3300002511\|JGI25131J35506_1016124	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300002511\|JGI25131J35506_1017590	Not Available	984	Open in IMG/M
3300002511\|JGI25131J35506_1022704	Not Available	865	Open in IMG/M
3300002511\|JGI25131J35506_1033822	Not Available	704	Open in IMG/M
3300002511\|JGI25131J35506_1036316	Not Available	680	Open in IMG/M
3300002511\|JGI25131J35506_1050108	Not Available	579	Open in IMG/M
3300002511\|JGI25131J35506_1064728	Not Available	510	Open in IMG/M
3300002514\|JGI25133J35611_10144734	Not Available	658	Open in IMG/M
3300002519\|JGI25130J35507_1011167	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300002760\|JGI25136J39404_1010384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1649	Open in IMG/M
3300002760\|JGI25136J39404_1017552	Not Available	1291	Open in IMG/M
3300002760\|JGI25136J39404_1022283	Not Available	1150	Open in IMG/M
3300002760\|JGI25136J39404_1028066	Not Available	1027	Open in IMG/M
3300002760\|JGI25136J39404_1033399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	946	Open in IMG/M
3300002760\|JGI25136J39404_1034136	Not Available	936	Open in IMG/M
3300003539\|FS891DNA_10073175	Not Available	812	Open in IMG/M
3300003540\|FS896DNA_10587362	Not Available	625	Open in IMG/M
3300003542\|FS900DNA_10319392	Not Available	1016	Open in IMG/M
3300003542\|FS900DNA_10463892	Not Available	589	Open in IMG/M
3300003542\|FS900DNA_10573337	Not Available	540	Open in IMG/M
3300005423\|Ga0066828_10066737	Not Available	1278	Open in IMG/M
3300006352\|Ga0075448_10067322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	1136	Open in IMG/M
3300006736\|Ga0098033_1006410	All Organisms → Viruses → Predicted Viral	3975	Open in IMG/M
3300006736\|Ga0098033_1027014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	1755	Open in IMG/M
3300006736\|Ga0098033_1086120	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006736\|Ga0098033_1119469	Not Available	745	Open in IMG/M
3300006738\|Ga0098035_1076698	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300006738\|Ga0098035_1099092	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300006738\|Ga0098035_1135228	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300006738\|Ga0098035_1174532	Not Available	724	Open in IMG/M
3300006751\|Ga0098040_1008188	Not Available	3711	Open in IMG/M
3300006751\|Ga0098040_1016740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	2433	Open in IMG/M
3300006753\|Ga0098039_1137842	Not Available	835	Open in IMG/M
3300006753\|Ga0098039_1180242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300006753\|Ga0098039_1189407	Not Available	698	Open in IMG/M
3300006753\|Ga0098039_1236137	Not Available	616	Open in IMG/M
3300006754\|Ga0098044_1144207	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300006789\|Ga0098054_1021160	All Organisms → Viruses → Predicted Viral	2588	Open in IMG/M
3300006923\|Ga0098053_1032128	All Organisms → Viruses → Predicted Viral	1113	Open in IMG/M
3300006927\|Ga0098034_1122449	Not Available	740	Open in IMG/M
3300007756\|Ga0105664_1084245	Not Available	660	Open in IMG/M
3300007756\|Ga0105664_1089126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300007756\|Ga0105664_1178506	Not Available	732	Open in IMG/M
3300007758\|Ga0105668_1071576	Not Available	642	Open in IMG/M
3300007963\|Ga0110931_1174285	Not Available	644	Open in IMG/M
3300007963\|Ga0110931_1214612	Not Available	574	Open in IMG/M
3300008050\|Ga0098052_1143586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300008216\|Ga0114898_1120119	Not Available	773	Open in IMG/M
3300008217\|Ga0114899_1032634	All Organisms → Viruses → Predicted Viral	1935	Open in IMG/M
3300008219\|Ga0114905_1245375	Not Available	565	Open in IMG/M
3300009619\|Ga0105236_1062036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300009622\|Ga0105173_1020471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	997	Open in IMG/M
3300009622\|Ga0105173_1021796	Not Available	973	Open in IMG/M
3300009622\|Ga0105173_1064540	Not Available	635	Open in IMG/M
3300010150\|Ga0098056_1007429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4094	Open in IMG/M
3300010153\|Ga0098059_1074942	Not Available	1351	Open in IMG/M
3300010155\|Ga0098047_10088152	Not Available	1213	Open in IMG/M
3300010155\|Ga0098047_10155609	Not Available	883	Open in IMG/M
3300017703\|Ga0181367_1003230	Not Available	3015	Open in IMG/M
3300017705\|Ga0181372_1010360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	1678	Open in IMG/M
3300017718\|Ga0181375_1065311	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	599	Open in IMG/M
3300020364\|Ga0211538_1119700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300021084\|Ga0206678_10351453	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	701	Open in IMG/M
3300021791\|Ga0226832_10194685	Not Available	790	Open in IMG/M
3300022227\|Ga0187827_10013333	Not Available	8178	Open in IMG/M
3300022227\|Ga0187827_10028378	All Organisms → Viruses → Predicted Viral	4913	Open in IMG/M
3300025029\|Ga0207900_106887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300025042\|Ga0207889_1020266	Not Available	621	Open in IMG/M
3300025043\|Ga0207907_119439	Not Available	623	Open in IMG/M
3300025044\|Ga0207891_1020700	Not Available	834	Open in IMG/M
3300025045\|Ga0207901_1004866	All Organisms → Viruses → Predicted Viral	1997	Open in IMG/M
3300025045\|Ga0207901_1007825	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1521	Open in IMG/M
3300025045\|Ga0207901_1025450	Not Available	807	Open in IMG/M
3300025045\|Ga0207901_1027227	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	778	Open in IMG/M
3300025046\|Ga0207902_1003434	All Organisms → Viruses → Predicted Viral	1464	Open in IMG/M
3300025046\|Ga0207902_1007295	All Organisms → Viruses → Predicted Viral	1136	Open in IMG/M
3300025046\|Ga0207902_1039987	Not Available	583	Open in IMG/M
3300025049\|Ga0207898_1000180	All Organisms → cellular organisms → Bacteria	5057	Open in IMG/M
3300025049\|Ga0207898_1027936	Not Available	715	Open in IMG/M
3300025049\|Ga0207898_1030940	Not Available	679	Open in IMG/M
3300025050\|Ga0207892_1005915	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M
3300025050\|Ga0207892_1013656	Not Available	872	Open in IMG/M
3300025050\|Ga0207892_1040104	Not Available	546	Open in IMG/M
3300025052\|Ga0207906_1001852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3918	Open in IMG/M
3300025069\|Ga0207887_1024952	Not Available	952	Open in IMG/M
3300025078\|Ga0208668_1007926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	2397	Open in IMG/M
3300025082\|Ga0208156_1009396	Not Available	2418	Open in IMG/M
3300025096\|Ga0208011_1018690	Not Available	1805	Open in IMG/M
3300025103\|Ga0208013_1005374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4542	Open in IMG/M
3300025108\|Ga0208793_1083801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	915	Open in IMG/M
3300025109\|Ga0208553_1081094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300025114\|Ga0208433_1158756	Not Available	527	Open in IMG/M
3300025118\|Ga0208790_1019992	All Organisms → Viruses → Predicted Viral	2300	Open in IMG/M
3300025118\|Ga0208790_1085087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300025122\|Ga0209434_1075713	Not Available	994	Open in IMG/M
3300025122\|Ga0209434_1083766	Not Available	932	Open in IMG/M
3300025125\|Ga0209644_1002461	All Organisms → Viruses → Predicted Viral	3531	Open in IMG/M
3300025125\|Ga0209644_1016977	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1558	Open in IMG/M
3300025125\|Ga0209644_1018203	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
3300025125\|Ga0209644_1030457	All Organisms → Viruses → Predicted Viral	1201	Open in IMG/M
3300025125\|Ga0209644_1035891	Not Available	1113	Open in IMG/M
3300025125\|Ga0209644_1044622	Not Available	1007	Open in IMG/M
3300025125\|Ga0209644_1059650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300025125\|Ga0209644_1064152	Not Available	851	Open in IMG/M
3300025125\|Ga0209644_1075609	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	787	Open in IMG/M
3300025125\|Ga0209644_1086788	Not Available	736	Open in IMG/M
3300025125\|Ga0209644_1089897	Not Available	723	Open in IMG/M
3300025125\|Ga0209644_1115054	Not Available	639	Open in IMG/M
3300025125\|Ga0209644_1142763	Not Available	571	Open in IMG/M
3300025125\|Ga0209644_1172876	Not Available	514	Open in IMG/M
3300025141\|Ga0209756_1118827	Not Available	1109	Open in IMG/M
3300025241\|Ga0207893_1039742	Not Available	672	Open in IMG/M
3300025267\|Ga0208179_1090959	Not Available	615	Open in IMG/M
3300025277\|Ga0208180_1082421	Not Available	747	Open in IMG/M
3300025873\|Ga0209757_10023790	Not Available	1714	Open in IMG/M
3300025873\|Ga0209757_10042280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1324	Open in IMG/M
3300025873\|Ga0209757_10045251	Not Available	1285	Open in IMG/M
3300025873\|Ga0209757_10049737	Not Available	1229	Open in IMG/M
3300025873\|Ga0209757_10077204	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300025873\|Ga0209757_10079514	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD7-C12	989	Open in IMG/M
3300025873\|Ga0209757_10146614	Not Available	738	Open in IMG/M
3300025873\|Ga0209757_10171168	Not Available	684	Open in IMG/M
3300025873\|Ga0209757_10173436	Not Available	679	Open in IMG/M
3300026103\|Ga0208451_1014355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus erythropolis group → Rhodococcus erythropolis → Rhodococcus erythropolis SK121	846	Open in IMG/M
3300026103\|Ga0208451_1024846	Not Available	686	Open in IMG/M
3300026115\|Ga0208560_1020323	Not Available	616	Open in IMG/M
3300028448\|Ga0256383_113709	Not Available	655	Open in IMG/M
3300031606\|Ga0302119_10013784	All Organisms → Viruses → Predicted Viral	3440	Open in IMG/M
3300031757\|Ga0315328_10006920	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5652	Open in IMG/M
3300031775\|Ga0315326_10754720	Not Available	609	Open in IMG/M
3300032278\|Ga0310345_10018522	Not Available	5827	Open in IMG/M
3300032360\|Ga0315334_10866321	Not Available	782	Open in IMG/M
3300032360\|Ga0315334_11026820	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	714	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	90.00%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.29%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.43%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	87.14%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	4.29%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.57%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	75.00%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.00%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	5.00%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.57%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	3.57%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	2.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.14%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.43%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.71%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001721	Marine viral communities from the Pacific Ocean - LP-54	Environmental	Open in IMG/M
3300001731	Marine viral communities from the Pacific Ocean - LP-37	Environmental	Open in IMG/M
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental	Open in IMG/M
3300001739	Marine viral communities from the Deep Pacific Ocean - MSP-121	Environmental	Open in IMG/M
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental	Open in IMG/M
3300003540	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNA	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025029	Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)	Environmental	Open in IMG/M
3300025042	Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)	Environmental	Open in IMG/M
3300025043	Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)	Environmental	Open in IMG/M
3300025044	Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026103	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300028448	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 300m	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24528J20060_10027842	3300001721	Marine	LISEYQKWNDRQDRAREYHDTEGRALRDIERELREIRLLLAALTKHLGAK*
JGI24514J20073_10095014	3300001731	Marine	MLSSEQRAYNARQGRYREYYDTEGRALRDIERELREIRLLLVDLTKHLGAR*
JGI24520J20079_10077701	3300001735	Marine	MASSSEAQEWNARQARANEYYATEGRALRDIERELRELNSKLAALLKHFGARA*
JGI24658J20074_10037583	3300001739	Deep Ocean	MASSSEAQEWNARQARAGEYYATEGRALRDIERELREIRLLLAALAKHFGARA*
JGI24515J20084_10002122	3300001743	Marine	LISEYQKWNDRQERAREYHDTEGRALRDIERELREIRLLLAALTKHLGAK*
JGI24515J20084_10076981	3300001743	Marine	MELSSEAQEWNASQKRAREYHNTEGRALRDIERELREVNSKLAALLKHLGARA*
JGI25131J35506_10015924	3300002511	Marine	MTLSAEAQEYNARQGRYREYYDTEGRALSGIERELREIRLLLVDLTKHLGAR*
JGI25131J35506_10161244	3300002511	Marine	MLSSDAQKWNAAQARARXYHATEGRAXRDIERELRELNSKLGVLLKHLGADAGRRGH*
JGI25131J35506_10175904	3300002511	Marine	MLSSEAQKWNAAQERAVEYHNTEGRALRDIERELRELNSKLGLLLKHLGARA*
JGI25131J35506_10227043	3300002511	Marine	MSLSSEAQEWNARQARANEYYATEGRALGDIERELREIRKLLASLIQHLGAA*
JGI25131J35506_10338223	3300002511	Marine	EWNARQARANEYYATEGRALRDIEHELHQIRLLLAALAKHFGARA*
JGI25131J35506_10363161	3300002511	Marine	SEAQKWNAAQERAVEYHNTEGRALRDIERELRELNSKLGVLLKHLGARA*
JGI25131J35506_10501082	3300002511	Marine	SPFGGCGVTLSAEAQKWNARQGRYREYYDTEGRALRDIERELREIRLLLVALTKHLGAK*
JGI25131J35506_10647281	3300002511	Marine	MLSAEAKEYNARQGRYREYYATEDRALRDIERELREIRSLLAVLTKHFGAK*
JGI25133J35611_101447341	3300002514	Marine	MLSSDAKEWNARQDRALEYQNTEGRALSGIERELSKIRVLLEALYQHLGGMEGEKP*
JGI25130J35507_10111675	3300002519	Marine	MPSSDEQQKWNAAQARAVEYNATEGRALRDIERELREIRLLLAAVAKHFGVRA*
JGI25136J39404_10103842	3300002760	Marine	MXLSSEAQEWNARQARANEYYATEGRALGDIERELREIRKLLASLIQHLGAA*
JGI25136J39404_10175522	3300002760	Marine	MGSSSEAQEWNARQARANEYYATEGRALRDIERELRELNSKLAALLKHLGARA*
JGI25136J39404_10222831	3300002760	Marine	MLSSEAQKWNAAQERAVEYHATEGRALRDIERELRELNSKLGVLLKHLGARA*
JGI25136J39404_10280662	3300002760	Marine	MLSPEQRADNARQGRYREYYDTEGRSLRDIERELREIKLLLADLTKHLGAR*
JGI25136J39404_10333991	3300002760	Marine	MLSSEHRADNARQGRYKEYYDTEGRALRDIERELREIKLLLADLTKHLGAR*
JGI25136J39404_10341363	3300002760	Marine	FAAGPRHGSPFGGCGVTLSAEAQKWNARQGRYREYYDTEGRALRDIERELREIRLLLAALTKHLGAK*
FS891DNA_100731752	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	MASSSEAQEWNARQARAREYHNTEGRALRDIERELRELNSKLAALLKHLLEAT*
FS896DNA_105873621	3300003540	Diffuse Hydrothermal Flow Volcanic Vent	MTLSAEAEDWNARQKRYGEYYDTEGRALRSVEQELRQIRETLVELS
FS900DNA_103193921	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MASSSEAQEWNARQARANEYYATEGRALRDIERELREIRLLLAAVAKHFGVRA*
FS900DNA_104638921	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MLSPEQRADNARQGRYKEYYDTEGRALRDIERELREIKLLLADLTKHLGAQ*
FS900DNA_105733372	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MLISEYQKWNDRQDRAREYHDTEGRALRDIERELREIRLLLAALTKHFGAK*
Ga0066828_100667374	3300005423	Marine	MPLSSEDQKWNARQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0075448_100673222	3300006352	Marine	MALGSEAQEWNARQARAGEYHNTEGRALRDIERRLQEISKLLAALLKHFGARA*
Ga0098033_10064102	3300006736	Marine	MLSSDAEEWNARQKRALEYQNTEGRALCGIERELCKIRVLLEALYQHLGGTEGEKP*
Ga0098033_10270145	3300006736	Marine	MTTVTDRAGLTAAQRKWNAAQERASEYYATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098033_10861202	3300006736	Marine	MPLSSEDQKWNARQERAVEYSATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098033_11194693	3300006736	Marine	MPSSSEAQEWNARQKRAGEYYATEGRALRDIERELREIRLLLAGVAKHFGVRA*
Ga0098035_10766982	3300006738	Marine	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGTRR*
Ga0098035_10990922	3300006738	Marine	MLSSDAEEWNARQKRALEYQNTEGRALCGIERELCKIRVLLEALYQHLGGMEHDQRSNEGDIR*
Ga0098035_11352282	3300006738	Marine	MLSREAQKWNEAQERAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP*
Ga0098035_11745321	3300006738	Marine	MPSSDEQQKWNAAQARAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098040_10081881	3300006751	Marine	MPSSDEQQKWNAAQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098040_10167402	3300006751	Marine	MLSHEAQKWNERQERAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP*
Ga0098039_11378423	3300006753	Marine	MSDDAKQWNARQERAREYHETEGRALRDIERELREIRVLLEALYQHLGGEGKRR*
Ga0098039_11802424	3300006753	Marine	MLSREAQKWNEAQERAREYHATEGRALRDIERHLSAIRSLLERLVQ
Ga0098039_11894072	3300006753	Marine	MPLSSEAQEWNARQARASEYHATEGRALRDIERELREIRLLLAGLSKHFGVRA*
Ga0098039_12361372	3300006753	Marine	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGKRR*
Ga0098044_11442071	3300006754	Marine	MTTVTDRAGLTAAQRKWNAAQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098054_10211603	3300006789	Marine	MPWSSEAQEWNARQARASEYYATEGRALRDIERELREIRLLLAGLSKHFGVRA*
Ga0098053_10321284	3300006923	Marine	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGGRKT*
Ga0098034_11224492	3300006927	Marine	MPLSSEAQEWNARQARASEYYATEGRALRDIERELREIRLLLAALSKHFGVRA*
Ga0105664_10842452	3300007756	Background Seawater	MLISEYQKWNDRQDRAREYHDTEGRALRDIERELREIRLLLAALTKHLGAK*
Ga0105664_10891262	3300007756	Background Seawater	MASSSEAQEWNARQARAGEYYATEGRALRDIERRLQEISKLLAALLKHFGVRA*
Ga0105664_11785063	3300007756	Background Seawater	SAEAKDWNDRQGRYREYYATENRALRDIERELREIRLLLAALTKHFGAK*
Ga0105668_10715762	3300007758	Background Seawater	MASSSEAQEWNARQARANEYYATEGRALRDIERRLQEISKLLAALLKHFGARA*
Ga0110931_11742853	3300007963	Marine	MLSHEAQTWNERQERAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP*
Ga0110931_12146121	3300007963	Marine	RNQVHQQREIPLMPSSDEQQKWNAAQARAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098052_11435863	3300008050	Marine	MDYKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGKRR*
Ga0114898_11201192	3300008216	Deep Ocean	VDQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDE*
Ga0114899_10326345	3300008217	Deep Ocean	DQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDE*
Ga0114905_12453752	3300008219	Deep Ocean	MDQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDE*
Ga0105236_10620362	3300009619	Marine Oceanic	MPLSSEGQEWNARQKRASEYHATEGRALRDIERELREIRLLLAGLSEHFGVRP*
Ga0105173_10204712	3300009622	Marine Oceanic	MALGSEAQEWNARQARAGEYYATEGRALRDIERELREIRLLLAAVAKHFGVRA*
Ga0105173_10217963	3300009622	Marine Oceanic	MLSAEAKEYNVRQGRYREYYDTENRALRDIERELREIRLLLAALTKHFGAK*
Ga0105173_10645404	3300009622	Marine Oceanic	AQARGARLMLSPEAMRWNARQGRSREYHDTEGRALRDIERELREIKLLLADLTKHLGAR*
Ga0098056_10074296	3300010150	Marine	MLSREAQKWNEAQEWAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP*
Ga0098059_10749421	3300010153	Marine	QREIPLMPSSDEQQKWNAAQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0098047_100881524	3300010155	Marine	MPLSSEAQEWNARQARASEYYATEGRALRDIERELREIRLLLAGVAKHFGVRA*
Ga0098047_101556093	3300010155	Marine	MPLSSEDQEWNARQKRVSEYYATEGRALRDIERELQELNSKLDALLKHLGAT*
Ga0181367_10032308	3300017703	Marine	MPSSDEQQKWNAAQARAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0181372_10103604	3300017705	Marine	MLSHEAQKWNERQERAREYHATEGRALRDIESHLSAIRSLLERLVQHFGVRP
Ga0181375_10653112	3300017718	Marine	MLSSDAEEWNARQKRALEYQNTEGRALSGIERELSKIRVLLEALYQHLGGTEGEKP
Ga0211538_11197001	3300020364	Marine	MPSFDEQQKWNARQERAVEYNATEGRALRDIERELQELNSKLDALLKH
Ga0206678_103514532	3300021084	Seawater	MLSSEAKEWNARQSRAREYYDTEGRALHDIGRELHEIRVLLEALYQHLGGEGNSR
Ga0226832_101946852	3300021791	Hydrothermal Vent Fluids	MSDDAKQWNARQERAREYHETEGRALRDIERELREIRVLLEALYQHLGGEGKRR
Ga0187827_1001333316	3300022227	Seawater	MPLSSEDQKWNARQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0187827_100283783	3300022227	Seawater	MLSSDAEEWNARQKRALEYQNTEGRALCGIERELCKIRVLLEALYQHLGGTEGEKP
Ga0207900_1068872	3300025029	Marine	MASSSEAQEWNARQARANEYYATEGRALRDIERELRELNSKLAALLKHFGARA
Ga0207889_10202661	3300025042	Marine	MASSSEAQEWNARQARANEYYATEGRALRDIERRLQEISKLLAALLKHFGA
Ga0207907_1194392	3300025043	Marine	MALSSEAQEWNASQKRAREYHNTEGRALRDIERELREVNSKLAALLKHLGARA
Ga0207891_10207003	3300025044	Marine	MTSNAEAKDWNARQKRYREYYDTEGRSLRDIERELREIKLLLADLVNHLGAR
Ga0207901_10048664	3300025045	Marine	MLSTDAQEWNERNRRAGEYHATEGRALRDIERELREIRSLLLALVKHLGADAGYSGPRVY
Ga0207901_10078252	3300025045	Marine	MALGSEAQEWNARQARAGEYHATEGRALRDIERELREIRLLLAAVAKHFGVRA
Ga0207901_10254501	3300025045	Marine	MLSSEQRAYNARQGRYREYYDTEGRALRDIERELREIRLLLVDLTKHLGAR
Ga0207901_10272273	3300025045	Marine	WKVTKMLSSEAKEWNARQSRAREYYDTEGRALRDIGRELHEIRVLLEALYQHLGGEGNSR
Ga0207902_10034341	3300025046	Marine	MLSAEAKEWNARQGRHREYYDTEGRALRDIERELREIRSLLTALTKHFGAK
Ga0207902_10072954	3300025046	Marine	MLSPEQRADNARQGRYKEYYDTEGRALRDIERELREIKLLLADLTKHLGAQ
Ga0207902_10399873	3300025046	Marine	MDSEAQEWNASQKRAREYHNTEGRALRDIERELREVNSKLAALLKHLGARA
Ga0207898_10001802	3300025049	Marine	MLSAEAKDWNDRQGRYREYYATENRALRDIERELREIRLLLAALTEHLGAK
Ga0207898_10279362	3300025049	Marine	MLSPEQRADNARQGRYREYYDTEGRSLRDIERELREIKLLLADLTKHLGAQ
Ga0207898_10309402	3300025049	Marine	MALSSEAQEWNARQARAGEYYATEGRALRDIERELREIRLLLAAVAKHFGVRA
Ga0207892_10059154	3300025050	Marine	MLSPEQRADNARQGRYKEYYDTEGRALRDIERELREIKLLLVDLTKHLGAR
Ga0207892_10136564	3300025050	Marine	MTLSAEAQEYNARQGRYREYYDTEGRALRDVRQELREIRLLLTDLTKHLGAR
Ga0207892_10401042	3300025050	Marine	MASSSEAQEWNARQARANEYYATEGRALRDIERELREVNSKLAALLKHFGARA
Ga0207906_10018522	3300025052	Marine	LISEYQKWNDRQDRAREYHDTEGRALRDIERELREIRLLLAALTKHLGAK
Ga0207887_10249522	3300025069	Marine	VMSLSSEAQEWNARQARANEYYATEGRALGDIERELREIRKLLASLIQHLGAA
Ga0208668_10079262	3300025078	Marine	MTTVTDRAGLTAAQRKWNAAQERASEYYATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0208156_10093964	3300025082	Marine	MPLSSEDQKWNARQERAVEYSATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0208011_10186905	3300025096	Marine	MPSSDEQQKWNAAQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0208013_10053749	3300025103	Marine	MLSREAQKWNEAQERAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP
Ga0208793_10838011	3300025108	Marine	LTRWRRLPMLSREAQKWNEAQERAREYHATEGRALRDIERHLSAIRSLLERLVQHFGVRP
Ga0208553_10810942	3300025109	Marine	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGKRR
Ga0208433_11587562	3300025114	Marine	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGTRR
Ga0208790_10199927	3300025118	Marine	MLSSDAKEWNARQDRALEYQNTEGRALSGIERELSKIRVLLEALYQHLGGMEGEKP
Ga0208790_10850873	3300025118	Marine	MTTVTDRAGLTAAQRKWNAAQERAVEYNATEGRALRDIERELQELNSKLDALLKHLGAT
Ga0209434_10757133	3300025122	Marine	MPSSDEQQKWNAAQARAVEYNATEGRALRDIERELREIRLLLAAVAKHFGVRA
Ga0209434_10837662	3300025122	Marine	MTTVTDRAGLTAAQQKWNARQERAVEYNATEGRALRDIERELQELNSKLDTLLKHLGAT
Ga0209644_10024616	3300025125	Marine	MLSPEQRADNARQGRYREYYDTEGRSLRDIERELREIKLLLADLTKHLGAR
Ga0209644_10169772	3300025125	Marine	MLSSDAQKWNAAQARARGYHATEGRALRDIERELRELNSKLGVLLKHLGADAGRRGH
Ga0209644_10182035	3300025125	Marine	MTLSAEAQEYNARQGRYREYYDTEGRALSGIERELREIRLLLVDLTKHLGAR
Ga0209644_10304572	3300025125	Marine	MLSPEQREDNARQGRYRDYYATEGRSLRDIERELREIKLLLTDLTKHLGAR
Ga0209644_10358915	3300025125	Marine	VMGSSSEAQEWNARQARANEYYATEGRALRDIEHELHQIRLLLAALAKHFGARA
Ga0209644_10446222	3300025125	Marine	VTLSAEAQKWNARQGRYREYYDTEGRALRDIERELREIRLLLVALTKHLGAK
Ga0209644_10596504	3300025125	Marine	MLSSEAQKWNARQERAVEYHNTEGRALRDIERELRELNSKLAALLKHFGARA
Ga0209644_10641523	3300025125	Marine	MPLSDEAKEYNARQGRYREYYDTEGRALRDVRQELREIRLLLTDLTKHLGAR
Ga0209644_10756092	3300025125	Marine	MLSPEHRADNARQGRYREYYDTEGRALRDIERELREIKLLLTDLIKHLGAR
Ga0209644_10867883	3300025125	Marine	MPLSSEAQEWNARQARASEYYATEGRALRDIERELREIRLLLAGLSKHFGVSA
Ga0209644_10898972	3300025125	Marine	MLSAEAREWNARNKRYGEYYDTEGRALRDIERELREIRSLLAVLTKHFGAK
Ga0209644_11150542	3300025125	Marine	MSDEAQKWNARQERAVEYNATEGRALRDIERELREIRVLLQALYQHLGGEGKRR
Ga0209644_11427632	3300025125	Marine	MTLSAKAEEYNARQRRYREYYDTEGRALLNIEQELREIRSLLAVLTKHFGA
Ga0209644_11728762	3300025125	Marine	MLSSEAQKWNAAQERAVEYHATEGRALRDIERELRELNSKLGVLLKHLGARA
Ga0209756_11188271	3300025141	Marine	IPLMPSSDEQQKWNAAQARAVEYNATEGRALRDIERELREIRLLLAAVAKHFGVRA
Ga0207893_10397422	3300025241	Deep Ocean	MTLSAEAEDWNARQGRSREYYDTEGRALRDIERELREIRLLLVDLTKHLGAR
Ga0208179_10909592	3300025267	Deep Ocean	VDQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDE
Ga0208180_10824212	3300025277	Deep Ocean	MDQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDE
Ga0209757_100237901	3300025873	Marine	AQEWNARQARANEYYATEGRALGDIERELREIRKLLASLIQHLGAA
Ga0209757_100422802	3300025873	Marine	MLSAEAKEHNARQGRYREYYATEDRALRDIERELREIRSLLAVLTKHFGAK
Ga0209757_100452515	3300025873	Marine	MGSSSEAQEWNARQARANEYYATEGRALRDIERELRELNSKLAALLKHLGARA
Ga0209757_100497375	3300025873	Marine	MPLSSEDQKWNARQERAVEYNATEGRALRDIERELQELNSKLEALLKHLGAT
Ga0209757_100772044	3300025873	Marine	MLSSEHRADNARQGRYKEYYDTEGRALRDIERELREIKLLLADLTKHLGAR
Ga0209757_100795141	3300025873	Marine	VLSEEAKEWNARNKRYGEYYDTEGRALRDVRQELREIRMLLTDLTKHLRAR
Ga0209757_101466143	3300025873	Marine	MLSPEQREDNARQGRYRDYYATEGRSLRDIERELREIKLLLADLTKHLGAR
Ga0209757_101711682	3300025873	Marine	MGSSSEAQEWNARQARANEYYATEGRALRDIEHELHQIRLLLAALAKHFGARA
Ga0209757_101734361	3300025873	Marine	MALGSEAQEWNARQARANEYYATEGRALRDIERELREVNSKLAALLKHFGARA
Ga0208451_10143551	3300026103	Marine Oceanic	MALGSEAQEWNARQARAGEYYATEGRALRDIERELREIRLLLAAVAKHFGVRA
Ga0208451_10248463	3300026103	Marine Oceanic	MLSAEAKEYNVRQGRYREYYDTENRALRDIERELREIRLLLAALTKHFGAK
Ga0208560_10203232	3300026115	Marine Oceanic	MPLSSEAQEWNARQKRASEYHATEGRALRDIERELREIRLLLAGLSEHFGVRP
Ga0256383_1137092	3300028448	Seawater	MDQKEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGKENVDD
Ga0302119_100137842	3300031606	Marine	MMSDKAKEWNTRQERARDYHDLEGRALRDINTELREIRVLLEALYQHLGGEGKRR
Ga0315328_1000692010	3300031757	Seawater	MLSSEAKEWNARQERARDYHDTEGRALRDIERELREIRVLLEALYQHLGGEGNSR
Ga0315326_107547202	3300031775	Seawater	MLSSEAKEWNARQSRAREYYDTEGRALRDIGRELHEIRVLLEALYQHLGGEGNSR
Ga0310345_1001852212	3300032278	Seawater	MPLSSEAQEWNARQKRAGEYYATEGRALRDIERELREIRLLLAGLSKHFGVRA
Ga0315334_108663212	3300032360	Seawater	MPLSSEAQEWNARQARAREYHNTEGRALRDIERRLQEISKLLAALSKHFGVRA
Ga0315334_110268203	3300032360	Seawater	MDHEEWNARNARAREYHDTEGRALRDIERELREIRVLLEALYQHLGGEGNSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences