Metagenome / Metatranscriptome Family F054098

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054098
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	43 residues
Representative Sequence	LIDVIVKEVEAANQSNSQGAADADVQAEEGQAKEGAWELFTG
Number of Associated Samples	70
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.41 %
% of genes near scaffold ends (potentially truncated)	60.00 %
% of genes from short scaffolds (< 2000 bps)	84.29 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (52.857 % of family members)
Environment Ontology (ENVO)	Unclassified (92.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF14497	GST_C_3	5.71
PF02668	TauD	4.29
PF07040	DUF1326	4.29
PF08291	Peptidase_M15_3	3.57
PF13847	Methyltransf_31	2.14
PF01243	Putative_PNPOx	2.14
PF00378	ECH_1	2.14
PF04828	GFA	2.14
PF13417	GST_N_3	2.14
PF01925	TauE	1.43
PF12158	DUF3592	1.43
PF01019	G_glu_transpept	1.43
PF01042	Ribonuc_L-PSP	1.43
PF00211	Guanylate_cyc	1.43
PF04909	Amidohydro_2	1.43
PF00701	DHDPS	1.43
PF11342	DUF3144	1.43
PF06267	DUF1028	0.71
PF03060	NMO	0.71
PF00805	Pentapeptide	0.71
PF07045	DUF1330	0.71
PF07978	NIPSNAP	0.71
PF00848	Ring_hydroxyl_A	0.71
PF11249	DUF3047	0.71
PF02798	GST_N	0.71
PF00144	Beta-lactamase	0.71
PF01408	GFO_IDH_MocA	0.71
PF01212	Beta_elim_lyase	0.71
PF00296	Bac_luciferase	0.71
PF02517	Rce1-like	0.71
PF14534	DUF4440	0.71
PF13358	DDE_3	0.71
PF08241	Methyltransf_11	0.71
PF01977	UbiD	0.71
PF07690	MFS_1	0.71
PF04116	FA_hydroxylase	0.71
PF13817	DDE_Tnp_IS66_C	0.71
PF00106	adh_short	0.71
PF02627	CMD	0.71
PF13561	adh_short_C2	0.71
PF01661	Macro	0.71
PF13578	Methyltransf_24	0.71
PF07859	Abhydrolase_3	0.71
PF01743	PolyA_pol	0.71
PF05721	PhyH	0.71
PF14832	Tautomerase_3	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.29
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	4.29
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	2.86
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.14
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.43
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.43
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.43
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.43
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.43
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.43
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.71
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.71
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.71
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.71
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.71
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.71
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.71
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.71
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.71
COG0617	tRNA nucleotidyltransferase/poly(A) polymerase	Translation, ribosomal structure and biogenesis [J]	0.71
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.71
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.71
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.71
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.71
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.71
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.71
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.71
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.71
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.71
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.71
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.71
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.71
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.71
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.71
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.71
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.71
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.71
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.71
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.71
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.71
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.00 %
Unclassified	root	N/A	31.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.57 %
Unclassified	root	N/A	31.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	21.43 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	19.29 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3.57 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.43 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	18.57 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	3.57 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	18.57 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.57 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.43 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	18.57 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	3.57 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.43 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001683\|GBIDBA_10051671	Not Available	1535	Open in IMG/M
3300001840\|shallow_1042037	Not Available	1444	Open in IMG/M
3300005398\|Ga0066858_10053575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1189	Open in IMG/M
3300005399\|Ga0066860_10161810	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005423\|Ga0066828_10083661	Not Available	1118	Open in IMG/M
3300005423\|Ga0066828_10272887	Not Available	547	Open in IMG/M
3300005592\|Ga0066838_10052326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1164	Open in IMG/M
3300005948\|Ga0066380_10200746	Not Available	605	Open in IMG/M
3300006310\|Ga0068471_1138568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	697	Open in IMG/M
3300006310\|Ga0068471_1265017	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300006310\|Ga0068471_1495294	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300006324\|Ga0068476_1460384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	560	Open in IMG/M
3300006325\|Ga0068501_1153981	Not Available	590	Open in IMG/M
3300006336\|Ga0068502_1017305	Not Available	510	Open in IMG/M
3300006336\|Ga0068502_1199078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	644	Open in IMG/M
3300006336\|Ga0068502_1295979	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300006339\|Ga0068481_1321032	Not Available	1042	Open in IMG/M
3300006340\|Ga0068503_10064708	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300006900\|Ga0066376_10058024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2468	Open in IMG/M
3300006900\|Ga0066376_10137589	Not Available	1497	Open in IMG/M
3300006900\|Ga0066376_10166017	Not Available	1339	Open in IMG/M
3300006902\|Ga0066372_10151482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300006902\|Ga0066372_10592442	Not Available	659	Open in IMG/M
3300007160\|Ga0099959_1209692	Not Available	565	Open in IMG/M
3300007291\|Ga0066367_1162626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	846	Open in IMG/M
3300008788\|Ga0103688_1020517	Not Available	544	Open in IMG/M
3300009104\|Ga0117902_1045330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5397	Open in IMG/M
3300009104\|Ga0117902_1626992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	846	Open in IMG/M
3300009173\|Ga0114996_10045027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4043	Open in IMG/M
3300009173\|Ga0114996_10163496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300009173\|Ga0114996_10217106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1534	Open in IMG/M
3300009173\|Ga0114996_10321489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1205	Open in IMG/M
3300009173\|Ga0114996_10339155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1166	Open in IMG/M
3300009173\|Ga0114996_10477338	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009173\|Ga0114996_10924245	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300009173\|Ga0114996_11017239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	588	Open in IMG/M
3300009376\|Ga0118722_1157868	Not Available	1439	Open in IMG/M
3300009409\|Ga0114993_10094038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2359	Open in IMG/M
3300009409\|Ga0114993_10323340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1170	Open in IMG/M
3300009409\|Ga0114993_10890503	Not Available	638	Open in IMG/M
3300009706\|Ga0115002_10284236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1254	Open in IMG/M
3300009706\|Ga0115002_10551406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	831	Open in IMG/M
3300009706\|Ga0115002_10639613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	757	Open in IMG/M
3300009706\|Ga0115002_11126516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	533	Open in IMG/M
3300009786\|Ga0114999_10247012	Not Available	1458	Open in IMG/M
3300009786\|Ga0114999_10304451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300009786\|Ga0114999_10753980	Not Available	723	Open in IMG/M
3300009786\|Ga0114999_11188490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300009786\|Ga0114999_11248509	Not Available	528	Open in IMG/M
3300010883\|Ga0133547_11460618	Not Available	1286	Open in IMG/M
3300020272\|Ga0211566_1044738	Not Available	979	Open in IMG/M
3300020398\|Ga0211637_10380026	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300020398\|Ga0211637_10410288	Not Available	536	Open in IMG/M
3300020399\|Ga0211623_10210734	Not Available	685	Open in IMG/M
3300020407\|Ga0211575_10179006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300020443\|Ga0211544_10385470	Not Available	560	Open in IMG/M
3300020444\|Ga0211578_10153783	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300020444\|Ga0211578_10259016	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300020458\|Ga0211697_10224729	Not Available	776	Open in IMG/M
3300021087\|Ga0206683_10578362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	545	Open in IMG/M
3300021089\|Ga0206679_10656397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	531	Open in IMG/M
3300021443\|Ga0206681_10260648	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300022225\|Ga0187833_10130382	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300026188\|Ga0208274_1130982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	554	Open in IMG/M
3300026264\|Ga0207991_1097870	Not Available	734	Open in IMG/M
3300026279\|Ga0208411_1042022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1497	Open in IMG/M
3300027699\|Ga0209752_1203370	Not Available	544	Open in IMG/M
3300027755\|Ga0209034_10131768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	796	Open in IMG/M
3300027827\|Ga0209035_10106696	Not Available	1387	Open in IMG/M
3300027827\|Ga0209035_10269644	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300027838\|Ga0209089_10081485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2023	Open in IMG/M
3300027838\|Ga0209089_10087369	All Organisms → cellular organisms → Bacteria → Proteobacteria	1941	Open in IMG/M
3300027838\|Ga0209089_10412568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	746	Open in IMG/M
3300027839\|Ga0209403_10050061	All Organisms → cellular organisms → Bacteria → Proteobacteria	3101	Open in IMG/M
3300027839\|Ga0209403_10144685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1483	Open in IMG/M
3300027839\|Ga0209403_10386605	Not Available	740	Open in IMG/M
3300027844\|Ga0209501_10098536	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300027844\|Ga0209501_10139916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1616	Open in IMG/M
3300027844\|Ga0209501_10189327	Not Available	1334	Open in IMG/M
3300027844\|Ga0209501_10403199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	809	Open in IMG/M
3300027844\|Ga0209501_10418404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	789	Open in IMG/M
3300027844\|Ga0209501_10595789	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300027847\|Ga0209402_10184044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1374	Open in IMG/M
3300027847\|Ga0209402_10220123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300027847\|Ga0209402_10555716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	658	Open in IMG/M
3300027847\|Ga0209402_10806893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	500	Open in IMG/M
3300031605\|Ga0302132_10393656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300031606\|Ga0302119_10116153	Not Available	1080	Open in IMG/M
3300031606\|Ga0302119_10296353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	604	Open in IMG/M
3300031623\|Ga0302123_10042217	All Organisms → cellular organisms → Bacteria → Proteobacteria	2552	Open in IMG/M
3300031623\|Ga0302123_10090940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1629	Open in IMG/M
3300031623\|Ga0302123_10124442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1352	Open in IMG/M
3300031623\|Ga0302123_10271788	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300031623\|Ga0302123_10505105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300031625\|Ga0302135_10054240	All Organisms → cellular organisms → Bacteria → Proteobacteria	2022	Open in IMG/M
3300031625\|Ga0302135_10165064	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300031627\|Ga0302118_10039572	All Organisms → cellular organisms → Bacteria → Proteobacteria	2415	Open in IMG/M
3300031639\|Ga0302117_10177503	Not Available	893	Open in IMG/M
3300031646\|Ga0302133_10031007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2952	Open in IMG/M
3300031646\|Ga0302133_10287703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	779	Open in IMG/M
3300031693\|Ga0302139_10095897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1357	Open in IMG/M
3300031701\|Ga0302120_10152911	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300031757\|Ga0315328_10014041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4145	Open in IMG/M
3300031757\|Ga0315328_10701467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	572	Open in IMG/M
3300031802\|Ga0310123_10676738	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031803\|Ga0310120_10471759	Not Available	633	Open in IMG/M
3300031804\|Ga0310124_10176304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1318	Open in IMG/M
3300031811\|Ga0310125_10007007	All Organisms → cellular organisms → Bacteria	5951	Open in IMG/M
3300031811\|Ga0310125_10553117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300031861\|Ga0315319_10126341	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300032032\|Ga0315327_10069160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2135	Open in IMG/M
3300032032\|Ga0315327_10408790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300032048\|Ga0315329_10057115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1908	Open in IMG/M
3300032048\|Ga0315329_10117161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1364	Open in IMG/M
3300032048\|Ga0315329_10207362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300032127\|Ga0315305_1086958	Not Available	824	Open in IMG/M
3300032134\|Ga0315339_1024835	Not Available	2612	Open in IMG/M
3300032134\|Ga0315339_1027281	All Organisms → cellular organisms → Bacteria → Proteobacteria	2432	Open in IMG/M
3300032278\|Ga0310345_10884483	Not Available	871	Open in IMG/M
3300032278\|Ga0310345_11152012	Not Available	758	Open in IMG/M
3300032278\|Ga0310345_11693663	Not Available	617	Open in IMG/M
3300032278\|Ga0310345_11739748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	608	Open in IMG/M
3300032278\|Ga0310345_11873806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	584	Open in IMG/M
3300032278\|Ga0310345_12112031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300032278\|Ga0310345_12363479	Not Available	513	Open in IMG/M
3300032360\|Ga0315334_10020728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4469	Open in IMG/M
3300032360\|Ga0315334_10197822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1627	Open in IMG/M
3300032360\|Ga0315334_10740995	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300032820\|Ga0310342_100023093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4824	Open in IMG/M
3300032820\|Ga0310342_100165815	Not Available	2183	Open in IMG/M
3300032820\|Ga0310342_100259736	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300032820\|Ga0310342_100306726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300032820\|Ga0310342_100312931	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300032820\|Ga0310342_101515594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	798	Open in IMG/M
3300032820\|Ga0310342_103600653	Not Available	511	Open in IMG/M
3300034695\|Ga0372840_112444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	813	Open in IMG/M
3300034695\|Ga0372840_232415	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.29%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.43%
Coastal	Environmental → Aquatic → Marine → Coastal	2.14%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	70.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.00%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	6.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.43%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.14%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.14%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	52.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	12.14%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	10.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	6.43%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.43%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.86%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.14%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.43%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.43%
Hydrothermal Vent In Guaymas Basin In The Gulf Of California	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent In Guaymas Basin In The Gulf Of California	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300001840	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - gte1kb - lt4kb	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300008788	Microbial communities of hydrothermal vent plumes from the Guaymas Basin in the Gulf of California - Plume GD6i	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020272	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556120-ERR599127)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental	Open in IMG/M
3300020443	Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026264	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275 (SPAdes)	Environmental	Open in IMG/M
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental	Open in IMG/M
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental	Open in IMG/M
3300027755	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - 250m_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental	Open in IMG/M
3300031625	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surface	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031639	Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2	Environmental	Open in IMG/M
3300031646	Marine microbial communities from Western Arctic Ocean, Canada - CB9_33.1	Environmental	Open in IMG/M
3300031693	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_33.1	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032127	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032134	Ammonia-oxidizing marine archaeal communities from Pacific Ocean, United States - ASW #17	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GBIDBA_100516711	3300001683	Hydrothermal Vent Plume	VAELIDVIVKDVEASNQSDSQGATDANVQAEKDQAKEGAWGLFTG*
shallow_10420371	3300001840	Hydrothermal Vent Plume	FCASSMLRHVNGIVKEVETANQSNSQGAADADVQAEESQAKERAWE*
Ga0066858_100535751	3300005398	Marine	DGSPASPVGELIDVIVKEVEAADQSNSKGATDADVPAEEGQAKEGARELFTG*
Ga0066860_101618102	3300005399	Marine	ELIDVIVKEVETANQSNSQGATDADVQAEKDQAKEGAWELFTG*
Ga0066828_100836613	3300005423	Marine	LIDVIVKEVEAADQSNSQGAADADVPAEEGQAKEGAWELFTG*
Ga0066828_102728872	3300005423	Marine	GELIDVIVKEVEAANQSNSQSAADANVQAEEGQAKEGAWELFTG*
Ga0066838_100523262	3300005592	Marine	VDEAADQSNSQGATDADVQAEEGQAKEGAWELFTG*
Ga0066380_102007462	3300005948	Marine	KEVEAVTSDQPHSEGAGDADVQAEAGQPKEGAWELFTD*
Ga0068471_11385681	3300006310	Marine	VGELIDGIVKEVETTNQSNSQGAAETDVPAEEGQAKERAWELFTG*
Ga0068471_12650171	3300006310	Marine	MLRNVNSIVKKVETANQSSSQGTADTDVQAEEGQAKEGTWELFT
Ga0068471_14952946	3300006310	Marine	PVGELIDVIVKKVEASNQPNSQGAADTDVQAEEGQAKEGAWELFTG*
Ga0068476_14603842	3300006324	Marine	VGELVDVIVKEVEASHQPNSQGAADADVPAEEGQAKERAWELFES*
Ga0068501_11539811	3300006325	Marine	KSMNGQHDVAVIVKEVEASNQPNSQGAADTDVQAEEGQAKEGAWELFTG*
Ga0068480_12741071	3300006335	Marine	MHGHAIIKQAATSDQPNSQGATDADVPEEEGRAKERAWELFTS*
Ga0068502_10173051	3300006336	Marine	VEAANQSNSQGAADADVPAEEGPSEKRARELFTG*
Ga0068502_11990781	3300006336	Marine	LIDVIVKEVETANQSNSQGSADADVQAEEGQAKEGAWELFTG*
Ga0068502_12959791	3300006336	Marine	DIIVKEVETANQSISQGAADTEVQVEEGQAKERAWELFTG*
Ga0068481_12063471	3300006339	Marine	VGKLVDAIVKKIEAATSDQPDSEGATDADVPAKGGQAKERAWE*
Ga0068481_13210322	3300006339	Marine	MFRKGRASPEGELINAIVKEAATSDQPNSEGAADADVPAEEDQAKERTWELFTG*
Ga0068503_100647081	3300006340	Marine	MFRKGRASPEGELINVIVKEAATSDQPNSEGAADADVPAEEDQAKERAWELFTG*
Ga0066376_100580243	3300006900	Marine	VGELIDVIVKEVETAHQSNSQGAADTDVQAEADQAKEGAWELFTG*
Ga0066376_101375891	3300006900	Marine	IDVIVKEVETAKQSNSQGATDADVQAEEDQAKEGAWELFTG*
Ga0066376_101660171	3300006900	Marine	LIDVIVKEVETAHQSNSQGAADADVEAEEDQAKEGAWELFEG*
Ga0066372_101514821	3300006902	Marine	LIDVIVKEVEASNHSNSEGAADADVPAEEDQVKEGAWELFTEIN*
Ga0066372_105924423	3300006902	Marine	GELIDVIVKEVEAANQSNSQGATDSGVQAEEGQAKERAWELFTG*
Ga0099959_12096921	3300007160	Marine	WQHYVIDVIVKEVEAAHQSNSKGAADADVQEEEGQAKEGAWELFTG*
Ga0066367_11626262	3300007291	Marine	LIDVIVKEVETANQSNSQGAADAEVQAEEGEAKEGAWELFTG*
Ga0103688_10205172	3300008788	Hydrothermal Vent In Guaymas Basin In The Gulf Of California	ELIDVIVKEVEAANQSNSQGAADTDVQAEEDQAKEGAWELFTG*
Ga0117902_10453304	3300009104	Marine	VGELIDVIVKEVEAANQSNSQGFAVADIPAEESQAKERAWELFTG*
Ga0117902_16269921	3300009104	Marine	MLRHVNGIVKEVETANQSNSQGAADTDVQAEKGQAKEGAWELFTG*
Ga0114996_100450279	3300009173	Marine	VGELIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG*
Ga0114996_101634964	3300009173	Marine	LIDVIVKEVEAAHQSNSQGAADADVQAEKDQAKERAWELFTG*
Ga0114996_102171063	3300009173	Marine	LIDVIVKEVEATNHPDSQGATDADNQAEKDQAKEGASELFTD*
Ga0114996_103214893	3300009173	Marine	EVEAAHQSNSEGAADADVQAEKDQAKEGAWELFTG*
Ga0114996_103391552	3300009173	Marine	VGELIDVIVKEVEASLQPDSQGTADAEVPVEEGQAKEGAWGLFTG*
Ga0114996_104773383	3300009173	Marine	VIVKEVEATNQPDSQGAADADVQAEKDQAKEGAWELFPG*
Ga0114996_109242452	3300009173	Marine	LIDVIVKEVEAAHQSNSQGATDADVQAEEGQAKEGAWELFTG*
Ga0114996_110172392	3300009173	Marine	LIDVIVKAVEATNQPDSQGAADADVQAEKDQAKEGAWELFTG*
Ga0118722_11578683	3300009376	Marine	VGKLIDVIVKEVEAANQSNNQGSAVADVPAEESQAKERAWELFTG*
Ga0114993_100940381	3300009409	Marine	VGELIDVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG*
Ga0114993_103233402	3300009409	Marine	VGELIDVIVKEVEASLQPDSQGTADAEAPVEEGQAKEGAWGLFTG*
Ga0114993_108905031	3300009409	Marine	ELIDVIVKEVEAAHQSNSQGAADADVQAEKDQAKEGAWELFTG*
Ga0115002_102842364	3300009706	Marine	IVKEVEAAHQSNSEGAADADVQAEKDQAKEGAWELFTG*
Ga0115002_105514061	3300009706	Marine	IVKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG*
Ga0115002_106396132	3300009706	Marine	EDGSPASPVGELIDVIVKEVEAAHQSNSQGAADADVQAEKNQAKEGAWELFTG*
Ga0115002_111265162	3300009706	Marine	LIDVIVKEVEATNQPDSQGAADADVQAEKDQAKEGAWELFTG*
Ga0114999_102470121	3300009786	Marine	DVIVKEVEAAHQSNSQGAADADVQAEKDQAKEGAWELFTG*
Ga0114999_103044512	3300009786	Marine	VGELIDVIVKEVEASNQSNSQGAADADVQAEKDQAKEGAWELFTG*
Ga0114999_107539802	3300009786	Marine	LIDVIVKEVEAAHQSNSQGATDAGLPAEEGQAKEGAWELFKG*
Ga0114999_111884903	3300009786	Marine	TAHRLAPWGGVIDVIVKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG*
Ga0114999_112485091	3300009786	Marine	KEVEAAHQSNSEGAADADVQAEKDQAKEGAWELFTG*
Ga0133547_114606182	3300010883	Marine	DVIVKEVEAAHQSNSEGAADADVQAEKNQAKEGAWELFTG*
Ga0211566_10447383	3300020272	Marine	GELIDVIVKEVEAADQSNSKGATDADVPAEEGQAKEGARELFTG
Ga0211637_103800262	3300020398	Marine	AIVKEVETANQSNSQGAADTDVPAEEGQAKEGAWELFTG
Ga0211637_104102881	3300020398	Marine	VVKEVKAATSDQPHSEGARDTDVQAEEGQAKAGAWELFTG
Ga0211623_102107342	3300020399	Marine	EDGSPASPVGELIDVIVKEVEAAHQSNSQGATDADVQAEEDQAKEGAWELFTG
Ga0211575_101790061	3300020407	Marine	SKEVEAANQSNSQGAADADVQAEEGQAKEGAWELFTG
Ga0211544_103854701	3300020443	Marine	NEPRHGHAIVKEVEASHQPNSQGAADTNVPAEEGQAKERAWELFTG
Ga0211578_101537831	3300020444	Marine	GKLIDVIVKEVETSNQPNSQGSADADVQAEEGPAKKRAWELFTG
Ga0211578_102590162	3300020444	Marine	VGELIDVIVKEVETANQPNSQGAADIDVPAEEGQAKEGARELFTCLKMV
Ga0211697_102247291	3300020458	Marine	DVIVKEVETANRSNSQDAADTDVQAEEGQAKEGAWELFEG
Ga0206683_105783622	3300021087	Seawater	SPVGELIDVIVKEVEAANQSNSQGTADADVQAEEDQAKEGAWELFTG
Ga0206679_106563972	3300021089	Seawater	LIDVIVKEVEASNQSNSQGAPDVDVQAEEDQAKEEAWELFTG
Ga0206681_102606481	3300021443	Seawater	VGELIDVIVKEVETANQSNSQGATDADAPAEEGQAKEGAWELF
Ga0187833_101303823	3300022225	Seawater	LIDVIVKEVEAADQSNSQGAADADVPAEEGQAKEGAWELFTG
Ga0208274_11309821	3300026188	Marine	IDVIVKEVEAADQSNSEGATDADVPAEEGQAKEGAWELFTG
Ga0207991_10978702	3300026264	Marine	KEVETANQSNSQGATDADVQAEEDPAKEGAWELFTG
Ga0208411_10420225	3300026279	Marine	VGELIDVIVKEVEAADQSNSKGATDADVPAEEGQAKEGARELFTG
Ga0209752_12033702	3300027699	Marine	GIVKEVEASHQPNSQGATDADVPAEEGQAKEGAWELFTG
Ga0209034_101317681	3300027755	Marine	PVGELIDVIVKEAETANQSNSQGAADADVQAEEGQAKEGAWELFTG
Ga0209035_101066961	3300027827	Marine	VGELIDVIVKEVEASNQSNSQGAADADVQAEKYQAKEGAWELFTG
Ga0209035_102696442	3300027827	Marine	PVGELIDVIVKEVEAAHQSNSQGATDADVQAEKDQAKEGAWELFTG
Ga0209089_100814852	3300027838	Marine	LIDVIVKEVEATNHPDSQGATDADNQAEKDQAKEGASELFTD
Ga0209089_100873692	3300027838	Marine	MVCRLIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG
Ga0209089_104125681	3300027838	Marine	EVEAAHQSNSEGAADADVQAEKDQAKEGAWDLFSG
Ga0209403_100500615	3300027839	Marine	VIDVIVKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG
Ga0209403_101446851	3300027839	Marine	LIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG
Ga0209403_103866051	3300027839	Marine	MVCRLIYVIVKEVEAANQSNRQGAADAGLPAEEGQAK
Ga0209501_100985364	3300027844	Marine	PTTVCSGLPVKEVKTAHQSNSQGAADADVQAEKDQAKEGAWELFSG
Ga0209501_101399162	3300027844	Marine	VGELIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG
Ga0209501_101893271	3300027844	Marine	MVCRLIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWEL
Ga0209501_104031991	3300027844	Marine	EVEAAHQSNSEGAADADVQAEKDQAKEGAWELFTG
Ga0209501_104184043	3300027844	Marine	SPVGELIGVIVKEVEAAHQSNSEGAADADVQAEKDQAKEGAWDLFAG
Ga0209501_105957892	3300027844	Marine	LIYVIVKEVEAAHQSNSQGATDADVQAEEGQAKEGAWELFTG
Ga0209402_101840441	3300027847	Marine	DLIVKEVEASNQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0209402_102201234	3300027847	Marine	VGELIYVIVKEVEAANQSNRQGAADAGLPAEEGQAK
Ga0209402_104191241	3300027847	Marine	EVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG
Ga0209402_105557161	3300027847	Marine	IVKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG
Ga0209402_108068931	3300027847	Marine	MGELIDVIVKEVEASNQSNSQGAADADVQAEKDQAKEAAWELFTG
Ga0302132_103936562	3300031605	Marine	KEVEASNQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0302119_101161532	3300031606	Marine	VGELIDVIVKEVEAAHQSNSEGAADADVQAEEDQAKEGAWELFTG
Ga0302119_102963533	3300031606	Marine	VGELIDVIVKEVEASNQSNSQGAPDADVRAEEDQAKEGAWELFTG
Ga0302123_100422175	3300031623	Marine	MVCRLIDVIVKEVEAANQSNRQGAADAGLPAEEGQAKEGAWELFKG
Ga0302123_100909402	3300031623	Marine	VGELIDVIVKEVEAAHQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0302123_101244423	3300031623	Marine	VGELIYVIVKEVEAANQSNRQDAADAGLPAEEGQAKEGAWELFKG
Ga0302123_102717882	3300031623	Marine	RLIDVIVKEVEAAHQSNSQGATDADVQAEEGQAKEGAWELFTG
Ga0302123_105051052	3300031623	Marine	EDGSPASPVGELIDVIVKEVEAAHQSNSEGAADADIQAEKDQAKEGAWELFTG
Ga0302135_100542401	3300031625	Marine	PVGELIDVIVKEVEAAHQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0302135_101650642	3300031625	Marine	VGELIEVIVKEVKTAHQSNSQGAADADVQAEKDQAKEGAWELFAG
Ga0302118_100395724	3300031627	Marine	MVCRLIDVIVKEVEAAHQSNSQGATDADVQAEEGQAKEGAWELFTG
Ga0302117_101775031	3300031639	Marine	MDVIVKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG
Ga0302133_100310073	3300031646	Marine	MGELIDVIVKEVEASNQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0302133_102877033	3300031646	Marine	VKEVEAANKSNSQGAANADVQAEKDQAKEGAWELFTG
Ga0302139_100958975	3300031693	Marine	MVCRLIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKE
Ga0302120_101529111	3300031701	Marine	PASPVGELIDVIVKEVEASNQSNSQGAPDADFQAEEDQAKEGAWELFTG
Ga0315328_100140411	3300031757	Seawater	LIDVIVREVEAAKQSNCQGAADAAIQAENDQAKEGAWELFTG
Ga0315328_107014672	3300031757	Seawater	SPASPVGELIDVIVKEVEAANQSNSQGAADADVQAEEDQAKEGAWELFTG
Ga0310123_106767382	3300031802	Marine	IDVIVKEVEASNQSNSQGAADADVQVEEDQAKEGAWELFTG
Ga0310120_104717592	3300031803	Marine	LIDVIVKEVETANQSNSQGTADADVQAEEDQAKEGAWELFTG
Ga0310124_101763044	3300031804	Marine	VGELIYVIVKEVEAANQSNRQGAADAGLPAEEGQAKEG
Ga0310125_1000700713	3300031811	Marine	LTSQPGGRLIDVIVKEVEATNHPDSQGATDADNQAEKDQAKEGASELFTD
Ga0310125_105531171	3300031811	Marine	RLEDGSPASPMGELIDVIVKEVEASNQSNSQGAADADVQAEKDQAKEAAWELFTG
Ga0315319_101263413	3300031861	Seawater	EVETANQSNSEGVADADVQAEEDQAKEGAWELFTG
Ga0315327_100691602	3300032032	Seawater	VGELIDVIVKEVETANQSNSQGATDADVQAEEDQAKEGAWELFTG
Ga0315327_104087902	3300032032	Seawater	REVEAANQSNSQGTADADVQAEEGQAKEGAWELFTG
Ga0315329_100571152	3300032048	Seawater	LIDVIVKEVEAANQSNSQGAPDADVQAEEDQAKEGAWELFTG
Ga0315329_101171614	3300032048	Seawater	GSKEVEAANQSNSQGAADADVQAEEGQAKEGAWELFTG
Ga0315329_102073623	3300032048	Seawater	EVEASNQSNSQGAADADVPAEEDQAKERAWELFTG
Ga0315305_10869581	3300032127	Marine	SPVGEFIDCIVKEVEASHQPDSQGTAHADVPVGEGQAKEGAWVLSTV
Ga0315339_10248354	3300032134	Seawater	VEELIDVIVKEVEASNQSNSQGAADADVQAEKDQAKEGAWELFTG
Ga0315339_10272813	3300032134	Seawater	GELIDVIVKEVEAAHQSNSQGSADADVQAEKDQAKEGAWELFTG
Ga0310345_108844831	3300032278	Seawater	ANRSGSMEVEASNQSNSQGVADADVSAEEGQAKGAAWELFTG
Ga0310345_111520123	3300032278	Seawater	VAELIDVIVKEVDAANQSNSQGAADAEVQAEEGEAKEGAWELFTG
Ga0310345_116936632	3300032278	Seawater	VAELIDVIVKEVETANQSNSQGAADADVQAEEGEAKEGAWELFTG
Ga0310345_117397481	3300032278	Seawater	SPVGELIDVIVKEVEAANQSNSQGATDADVPAEEGQAKEGAWELFAG
Ga0310345_118738061	3300032278	Seawater	SPLGEWIDAIVKKVEAATSNQPISRGAADADVQAEEGQAKEGAWELFTN
Ga0310345_121120313	3300032278	Seawater	DVAVIVKEVEAANQSNSQGAADADVQAEEGQAKEGAWELFTG
Ga0310345_123634791	3300032278	Seawater	PVGELIDVIVKEVEAANQSNSQGAADADVQAEEGPAKERAWELFTG
Ga0315334_100207283	3300032360	Seawater	LIDVIVKEVEAANQSNSQGAADADVQAEEGQAKEGAWELFTG
Ga0315334_101978224	3300032360	Seawater	VGELIDVIVKEVETANQSNSQGATDADVPAEEDQAKEGAWELFTG
Ga0315334_107409951	3300032360	Seawater	PVGELIDVIVKEVEAANQSNSQGAADADVQAEEDQAKEGAWELFTG
Ga0310342_1000230931	3300032820	Seawater	DVIVKEVEAANKSNSQGAADADVQAEEDQAKEGAWELFTG
Ga0310342_1001658151	3300032820	Seawater	ASPVGELIDVIVKEVEASNQSNSQGTADADIQAEADQAKEGARELFTG
Ga0310342_1002597363	3300032820	Seawater	SNQPNSQGATDAEVQAKEGQTKEGVWELFTGQPNFKC
Ga0310342_1003067261	3300032820	Seawater	VVVKEVKAATSDQPHSEGARDTDVQAEEDQAKKGAWELFTG
Ga0310342_1003129311	3300032820	Seawater	VGELIDVIVKEVEAANQSNSQGSTDADVPAEEGQAKEGAWELFTG
Ga0310342_1015155941	3300032820	Seawater	VGELIDIIVKEVETANESNSQGAADADVQVEEGQAKEGAWELFVG
Ga0310342_1036006531	3300032820	Seawater	HGSVINKEVEASASHQSNSQGATNTDVQAEEGQTKEGVWELFTG
Ga0372840_112444_328_456	3300034695	Seawater	LIDVIVKEVEAAHQYNSQGAADAKVPAEEGQAKKGAWELFTG
Ga0372840_232415_3_119	3300034695	Seawater	IVKEVEASHQPNSQGAADTDVQAAEGPAKERAWELFTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054098

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences