Metagenome / Metatranscriptome Family F054147

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054147
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	72 residues
Representative Sequence	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS
Number of Associated Samples	71
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.21 %
% of genes near scaffold ends (potentially truncated)	19.29 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (35.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00296	Bac_luciferase	3.57
PF00795	CN_hydrolase	2.14
PF02211	NHase_beta	1.43
PF02737	3HCDH_N	1.43
PF01569	PAP2	1.43
PF07992	Pyr_redox_2	1.43
PF01895	PhoU	1.43
PF14023	DUF4239	1.43
PF00905	Transpeptidase	1.43
PF02639	DUF188	1.43
PF00196	GerE	0.71
PF13561	adh_short_C2	0.71
PF06224	HTH_42	0.71
PF04299	FMN_bind_2	0.71
PF13426	PAS_9	0.71
PF08239	SH3_3	0.71
PF01019	G_glu_transpept	0.71
PF01042	Ribonuc_L-PSP	0.71
PF13302	Acetyltransf_3	0.71
PF00830	Ribosomal_L28	0.71
PF06032	DUF917	0.71
PF03992	ABM	0.71
PF00005	ABC_tran	0.71
PF00528	BPD_transp_1	0.71
PF13358	DDE_3	0.71
PF08241	Methyltransf_11	0.71
PF00202	Aminotran_3	0.71
PF13343	SBP_bac_6	0.71
PF00723	Glyco_hydro_15	0.71
PF12867	DinB_2	0.71
PF07366	SnoaL	0.71
PF04020	Phage_holin_4_2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.57
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.43
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	1.43
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.43
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.43
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.43
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	1.43
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	1.43
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	1.43
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.71
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.71
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.71
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.71
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.71
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.71
COG3535	Uncharacterized conserved protein, DUF917 family	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.00 %
Unclassified	root	N/A	20.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.29 %
Unclassified	root	N/A	20.00 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.29 %
Unclassified	root	N/A	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.43 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.71 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	55.71 %
Unclassified	root	N/A	20.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.71 %

Name	Rank	Taxonomy	Distribution
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	42.86 %
Unclassified	root	N/A	20.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.57 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.43 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.71 %
Oomycota	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.00 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	10.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.57 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	2.86 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.71 %
Saprolegniales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales	0.71 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.71 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.00 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.57 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	2.86 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.71 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.71 %
Saprolegniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae	0.71 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.00 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.57 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	2.86 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.71 %
unclassified Propionibacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae	0.71 %
Saprolegnia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Saprolegnia	0.71 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.00 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.57 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	2.86 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	0.71 %
Saprolegnia parasitica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Saprolegnia → Saprolegnia parasitica	0.71 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.71 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001281816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	1290	Open in IMG/M
3300000831\|JGI12271J12027_1043781	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300000956\|JGI10216J12902_116902677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	717	Open in IMG/M
3300003313\|P32013IDBA_1083647	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300004081\|Ga0063454_100978914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300004153\|Ga0063455_100109867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1161	Open in IMG/M
3300005529\|Ga0070741_10176141	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300005874\|Ga0075288_1080714	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006196\|Ga0075422_10400117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	607	Open in IMG/M
3300006847\|Ga0075431_101734343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	581	Open in IMG/M
3300006876\|Ga0079217_10030291	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300006894\|Ga0079215_10274795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	911	Open in IMG/M
3300006918\|Ga0079216_10968899	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300006918\|Ga0079216_11583551	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Saprolegniales → Saprolegniaceae → Saprolegnia → Saprolegnia parasitica	553	Open in IMG/M
3300007790\|Ga0105679_10280257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1036	Open in IMG/M
3300009659\|Ga0123328_1224133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	705	Open in IMG/M
3300009789\|Ga0126307_10035048	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300009789\|Ga0126307_10060090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	2980	Open in IMG/M
3300009789\|Ga0126307_10794571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	764	Open in IMG/M
3300009789\|Ga0126307_10809929	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009789\|Ga0126307_11052790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	658	Open in IMG/M
3300009789\|Ga0126307_11156199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	626	Open in IMG/M
3300009789\|Ga0126307_11456543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	555	Open in IMG/M
3300009789\|Ga0126307_11620040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	526	Open in IMG/M
3300009789\|Ga0126307_11720111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	510	Open in IMG/M
3300009840\|Ga0126313_10074851	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300009840\|Ga0126313_10925301	Not Available	712	Open in IMG/M
3300009840\|Ga0126313_11498986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	560	Open in IMG/M
3300009840\|Ga0126313_11567794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	548	Open in IMG/M
3300010036\|Ga0126305_10017144	All Organisms → cellular organisms → Bacteria	3747	Open in IMG/M
3300010036\|Ga0126305_10142111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1486	Open in IMG/M
3300010037\|Ga0126304_10016315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	4159	Open in IMG/M
3300010037\|Ga0126304_10074193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	2110	Open in IMG/M
3300010037\|Ga0126304_10300198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1063	Open in IMG/M
3300010037\|Ga0126304_10543885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	781	Open in IMG/M
3300010038\|Ga0126315_10134871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1450	Open in IMG/M
3300010038\|Ga0126315_10255242	Not Available	1071	Open in IMG/M
3300010038\|Ga0126315_10416416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	847	Open in IMG/M
3300010039\|Ga0126309_10243706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300010039\|Ga0126309_10439446	Not Available	790	Open in IMG/M
3300010039\|Ga0126309_10447333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	784	Open in IMG/M
3300010039\|Ga0126309_10733172	Not Available	638	Open in IMG/M
3300010040\|Ga0126308_10205112	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300010040\|Ga0126308_10550098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	783	Open in IMG/M
3300010040\|Ga0126308_10737737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	679	Open in IMG/M
3300010040\|Ga0126308_10965478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	596	Open in IMG/M
3300010041\|Ga0126312_10358239	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300010041\|Ga0126312_10478461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	890	Open in IMG/M
3300010041\|Ga0126312_10688948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	737	Open in IMG/M
3300010041\|Ga0126312_11152632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	570	Open in IMG/M
3300010042\|Ga0126314_10119264	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300010042\|Ga0126314_10278670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1190	Open in IMG/M
3300010044\|Ga0126310_10014553	All Organisms → cellular organisms → Bacteria	3776	Open in IMG/M
3300010044\|Ga0126310_10145371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1503	Open in IMG/M
3300010044\|Ga0126310_10382964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	996	Open in IMG/M
3300010044\|Ga0126310_10836518	Not Available	711	Open in IMG/M
3300010044\|Ga0126310_11085968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	636	Open in IMG/M
3300010045\|Ga0126311_10177115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1540	Open in IMG/M
3300010045\|Ga0126311_10203767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1444	Open in IMG/M
3300010045\|Ga0126311_10754990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	781	Open in IMG/M
3300010045\|Ga0126311_10913685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	713	Open in IMG/M
3300010045\|Ga0126311_11480633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	568	Open in IMG/M
3300010152\|Ga0126318_10301573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	505	Open in IMG/M
3300010152\|Ga0126318_10836439	Not Available	755	Open in IMG/M
3300010166\|Ga0126306_10465141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	996	Open in IMG/M
3300010166\|Ga0126306_10681557	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300010166\|Ga0126306_11381968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	582	Open in IMG/M
3300011332\|Ga0126317_10969745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	523	Open in IMG/M
3300011333\|Ga0127502_10421634	Not Available	578	Open in IMG/M
3300011333\|Ga0127502_10968384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1038	Open in IMG/M
3300012186\|Ga0136620_10487167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	523	Open in IMG/M
3300012188\|Ga0136618_10189104	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012212\|Ga0150985_106063592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300012212\|Ga0150985_107335901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1378	Open in IMG/M
3300012212\|Ga0150985_111112435	Not Available	743	Open in IMG/M
3300012212\|Ga0150985_114392109	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300012212\|Ga0150985_114840471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300012212\|Ga0150985_116476173	Not Available	526	Open in IMG/M
3300012469\|Ga0150984_105676293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2049	Open in IMG/M
3300012469\|Ga0150984_108045381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300012469\|Ga0150984_112230952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1209	Open in IMG/M
3300012469\|Ga0150984_112276620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	622	Open in IMG/M
3300012680\|Ga0136612_10005250	All Organisms → cellular organisms → Bacteria	6195	Open in IMG/M
3300012680\|Ga0136612_10521561	Not Available	603	Open in IMG/M
3300012681\|Ga0136613_10434650	Not Available	715	Open in IMG/M
3300012682\|Ga0136611_10006114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8470	Open in IMG/M
3300012682\|Ga0136611_10081131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	2294	Open in IMG/M
3300012682\|Ga0136611_10187093	Not Available	1417	Open in IMG/M
3300012682\|Ga0136611_10720528	Not Available	606	Open in IMG/M
3300012908\|Ga0157286_10425659	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300013012\|Ga0169965_1000121	All Organisms → cellular organisms → Bacteria	41833	Open in IMG/M
3300013013\|Ga0169969_1033363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1254	Open in IMG/M
3300013027\|Ga0170683_10142079	Not Available	621	Open in IMG/M
3300014272\|Ga0075327_1178716	Not Available	671	Open in IMG/M
3300017648\|Ga0180216_1075820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300017787\|Ga0183260_10125072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1847	Open in IMG/M
3300017787\|Ga0183260_10748251	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300017789\|Ga0136617_10021231	All Organisms → cellular organisms → Bacteria	5786	Open in IMG/M
3300017789\|Ga0136617_10290590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1348	Open in IMG/M
3300017789\|Ga0136617_10363585	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300017789\|Ga0136617_11110638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	597	Open in IMG/M
3300017789\|Ga0136617_11126930	Not Available	592	Open in IMG/M
3300017789\|Ga0136617_11183768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	575	Open in IMG/M
3300018422\|Ga0190265_11490159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	790	Open in IMG/M
3300018422\|Ga0190265_13206212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	546	Open in IMG/M
3300018432\|Ga0190275_11876379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	678	Open in IMG/M
3300018465\|Ga0190269_11057748	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018466\|Ga0190268_10708756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	741	Open in IMG/M
3300018469\|Ga0190270_10299079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1433	Open in IMG/M
3300018920\|Ga0190273_12272562	Not Available	512	Open in IMG/M
3300019377\|Ga0190264_11922430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	538	Open in IMG/M
3300020078\|Ga0206352_10138641	Not Available	519	Open in IMG/M
3300020080\|Ga0206350_10333789	Not Available	591	Open in IMG/M
3300020081\|Ga0206354_10168271	Not Available	584	Open in IMG/M
3300022467\|Ga0224712_10256053	Not Available	810	Open in IMG/M
3300022467\|Ga0224712_10396183	Not Available	658	Open in IMG/M
3300027637\|Ga0209818_1245765	Not Available	538	Open in IMG/M
3300028597\|Ga0247820_10281287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1083	Open in IMG/M
3300028705\|Ga0307276_10037431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1033	Open in IMG/M
3300031058\|Ga0308189_10110434	Not Available	887	Open in IMG/M
3300031091\|Ga0308201_10222024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	636	Open in IMG/M
3300031091\|Ga0308201_10381243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	525	Open in IMG/M
3300031092\|Ga0308204_10112996	All Organisms → cellular organisms → Bacteria → Terrabacteria group	764	Open in IMG/M
3300031092\|Ga0308204_10331400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	518	Open in IMG/M
3300031454\|Ga0272427_1001995	All Organisms → cellular organisms → Bacteria	38946	Open in IMG/M
3300031473\|Ga0272434_1052479	All Organisms → cellular organisms → Bacteria	3304	Open in IMG/M
3300031473\|Ga0272434_1315287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	651	Open in IMG/M
3300031824\|Ga0307413_10178904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1510	Open in IMG/M
3300031824\|Ga0307413_11940326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	530	Open in IMG/M
3300031903\|Ga0307407_10634878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	798	Open in IMG/M
3300031903\|Ga0307407_11258790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	579	Open in IMG/M
3300031938\|Ga0308175_100382960	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300031938\|Ga0308175_100730638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1078	Open in IMG/M
3300031995\|Ga0307409_101498079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	702	Open in IMG/M
3300032002\|Ga0307416_103348848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	536	Open in IMG/M
3300032074\|Ga0308173_12288330	Not Available	510	Open in IMG/M
3300032159\|Ga0268251_10439351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.71%
Host-Associated	Host-Associated	13.57%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.57%
Aquatic	Environmental → Aquatic	17.14%
Plants	Host-Associated → Plants	13.57%
Bioreactor	Engineered → Bioreactor	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.29%
Freshwater	Environmental → Aquatic → Freshwater	17.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.29%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	2.14%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.14%
Phylloplane	Host-Associated → Plants → Phylloplane	0.71%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Ice	Environmental → Aquatic → Freshwater → Ice	13.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.43%
Loam	Environmental → Terrestrial → Soil → Loam	1.43%
Sand	Environmental → Terrestrial → Soil → Sand	1.43%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.71%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.14%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.71%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	35.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	13.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.29%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.86%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	2.14%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.43%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.71%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.71%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
3300000831	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate B) D5B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300013012	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013013	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300013027	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300017648	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig MG (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001329434	2001200001	Soil	MPHRTQRDHDKDQELDPAGERGGDTGPSSYEDDGPQAEKGDLRRDKPVHSGPTRRGADRSSRSGSDSNASR
JGI12271J12027_10437812	3300000831	Soil	MGQRDHDKDQDIDQAGERGGDTGHSSVKGDGPGAEKGDWRRDKPVHSGPTRKGSQGSDAKHDKRSGSESNAG*
JGI10216J12902_1169026772	3300000956	Soil	MAKRNDDDRDQEYDPRGEHGGDTGKSAPVTGGEKGDQRRDTPVHSGPTRPGSQGTDAEHAKRSGSDSNADR*
P32013IDBA_10836471	3300003313	Ore Pile And Mine Drainage Contaminated Soil	MAQRGTDTDKDQDIDPAGEHGGDTGKSSYKDDGPQAEKGDQRRDKPVHSGPTRRGAHGRRSGSDSNAS*
Ga0063454_1009789141	3300004081	Soil	MAKRDHDKDQELDPAGAHGGDTGKSSFKGDGPQAEKGDQRRYTPVHSGPTRSGSQGTGSKHGKRSGSDSNA*
Ga0063455_1001098671	3300004153	Soil	DQDLDPTGARGGDTGKSSFKDDGPQAEKGDQRRDKPVHSGPTRHGAQGTRSQHGKRSGSESNAS*
Ga0070741_101761412	3300005529	Surface Soil	MGERSHDKDQSIDQAGEHGGDTGKSSVRGDGPGAEKGDWRRNEPVHSGPTRRGAQGTDSEHGKRSGSESNAS*
Ga0075288_10807141	3300005874	Rice Paddy Soil	MAQRDHDKDQELDPAGAHGGDTGKSSFKGDGSQAEKGHQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNASQ*
Ga0075422_104001171	3300006196	Populus Rhizosphere	MAKRNDDNDRDQEYDPRGERGGDTGNTAPITGGEKGDQRRDTPVHSGPTRRGAQGTDSEHGKRSGSDSNAS*
Ga0075431_1017343431	3300006847	Populus Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQVEKGDQRRDTPVHSGPTRRGSQGTRSDHGKRSGSESNAS*
Ga0079217_100302911	3300006876	Agricultural Soil	MAKRDHDKDQDLDPAGERGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGAQGARSEHGKRSGSESNASQ*
Ga0079215_102747952	3300006894	Agricultural Soil	MAKRDHLKDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGAQGTRSQHDKRSGSESNASQ*
Ga0079216_109688992	3300006918	Agricultural Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTDSEHGKRSGSDSNAS*
Ga0079216_115835511	3300006918	Agricultural Soil	MAKRDHDKDQELDPAGERGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGAQGTRSEHGKRSGSESNASQ*
Ga0105679_102802572	3300007790	Soil	MAKRDHDKDQDIDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTGSKHGKRSGSESNAS*
Ga0123328_12241331	3300009659	Anaerobic Biogas Reactor	MAKRDPDHDKDQELDPAGERGGDTGPSSYKDDGPQAEKGDQRRDTPVHSGPTRSGAKRHSRSGSDSNES*
Ga0126307_100350485	3300009789	Serpentine Soil	MATRDHDKDQELDPAGAHGGDTGPSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126307_100600902	3300009789	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTDSKHGKRSGSESNAS*
Ga0126307_107945711	3300009789	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSKHGKRSGSESNAS*
Ga0126307_108099291	3300009789	Serpentine Soil	MQRHLERRQTMAKRDHDKDQELDPAGERGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSQHDKRSGSESNAS*
Ga0126307_110527901	3300009789	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSKHGKRSGSESNAS*
Ga0126307_111561991	3300009789	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSYKDDGPQAEKGDQRRDNPVHSGPTRRGSQGTGSQHGKRSGSDSNAS*
Ga0126307_114565432	3300009789	Serpentine Soil	MAKRDHDKDQELDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSKHGKRSGSESNAS*
Ga0126307_116200401	3300009789	Serpentine Soil	AGAHGGDTGKSSFKGDGPQAEKGDQRRDTPIHSGPTRRGAQGTRSEHGKRSGSESNAS*
Ga0126307_117201111	3300009789	Serpentine Soil	RHLERRQTMAKRDHDKDQDIDPAGAHGGDTGKSSYKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126313_100748512	3300009840	Serpentine Soil	MAKRGQDTDADQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDKPVHSGPTRRGAQGTRSQHGKRSGSESNAS*
Ga0126313_109253012	3300009840	Serpentine Soil	MAKRRDDDEKDQDYDPKGEHGGDTGKTAPLGSGPQAEKGDQRREKPVHSGPTRPGAQGTESKHDKRSGSESNESR*
Ga0126313_114989862	3300009840	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126313_115677941	3300009840	Serpentine Soil	MAQRDQLKDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSQHDKRSGSESNAS*
Ga0126305_100171445	3300010036	Serpentine Soil	MATRDHDKDQELDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126305_101421113	3300010036	Serpentine Soil	DQEYDPRGERGGDTGNTAPITGGEKGDQRRDNPVHSGPTRRGAQGTDSEHGKRSGSDSNAS*
Ga0126304_100163155	3300010037	Serpentine Soil	MAKRGQDTDADQDLEPAGARGGDTGKSSIKDDGPQAEKGDQRRDKPVHSGPTRRGAQGTRSQHGKRSGSESNAS*
Ga0126304_100741934	3300010037	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS*
Ga0126304_103001981	3300010037	Serpentine Soil	MATRDHDKDQELDPAGAHGGDTGPSSFKDDGPQPEKGDQRRDTPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126304_105438852	3300010037	Serpentine Soil	MGKRDHDKDQDIDPAGAHGGDTGKSSYKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTGSQHGKRSGSDSNAS*
Ga0126315_101348712	3300010038	Serpentine Soil	MAKRGQDTDADQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDDPVHSGPTRHGAQGTRSQHGKRSGSESNAS*
Ga0126315_102552421	3300010038	Serpentine Soil	MSKRDHLKDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDKLVHSGPTRRGSQGTGSQHGKRSGSESNAS*
Ga0126315_104164161	3300010038	Serpentine Soil	VARDRDENDNNPNYDPKGERGGDTGKTDQAGKGVQAEKGDQRRDEPVHDGPTRRGAQWKQHEHSKRSG
Ga0126309_102437062	3300010039	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSDSNAS*
Ga0126309_104394462	3300010039	Serpentine Soil	MAKRDHDKDQDLDPAGSHGGDTGKSSFKDDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126309_104473331	3300010039	Serpentine Soil	MARRDHPKDEDQDFDPAGAHGGDTGKSSFKSDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126309_107331721	3300010039	Serpentine Soil	MPGRNPDKDQDLDPAGERGGDTGKSAPKGDGAQAEKGDHRRDTPVHSGPTRRGPGGSTNRRAKRSGSDSNASG*
Ga0126308_102051121	3300010040	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126308_105500981	3300010040	Serpentine Soil	MAKRDDDDDRDQEYDPRGERGGDTGNTAPITGGEKGDQRRDNPVHSGPTRRGAQGTDSEHGKRSGSDSNAS*
Ga0126308_107377371	3300010040	Serpentine Soil	MAKRDHDKDQDIDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126308_109654781	3300010040	Serpentine Soil	MATRDHDKDQELDPPGTHGGDTGPSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126312_103582392	3300010041	Serpentine Soil	MAKRDHDKDQDIDPAGAHGGDTGKSSYKGDGPQAEKGDQRRDNPVHSGPTRHGSQGTGSQHGKRSGSDSNAS*
Ga0126312_104784612	3300010041	Serpentine Soil	MAKRGQDTDADQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDKPVHSGPTRHGAQGTRSQHDKRSGSESNAS*
Ga0126312_106889482	3300010041	Serpentine Soil	MATRDHDKDQELDPAGTHGGDTGPSSFKDDGPQAEKGDQRHDTPVHSGPTRRGAQGTG
Ga0126312_111526321	3300010041	Serpentine Soil	MAKRDHDKDQEIDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESN
Ga0126314_101192641	3300010042	Serpentine Soil	MAKRDHDKDQELDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSDSNAS*
Ga0126314_102786702	3300010042	Serpentine Soil	VAKRNDDDDRDQEYDPRGERGGDTGKTAPITGGEKGDQRRNTPVHSGPTRPGSQGKDAEHAKRSGSDSNASR*
Ga0126310_100145535	3300010044	Serpentine Soil	MATRDHDKDQELDPAGTHGGDTGPSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126310_101453712	3300010044	Serpentine Soil	MAKRDHDKDQELDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0126310_103829641	3300010044	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTSSQHGKRSGSESNASQ*
Ga0126310_108365182	3300010044	Serpentine Soil	MAKRGQDTDADQDLDPAGAHGGDTGKSSFKGDGPQAENGDQRRDTPVHSGPTRRGAQGTHSQHDKRSGSESNASQ*
Ga0126310_110859681	3300010044	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSESNAS*
Ga0126311_101771152	3300010045	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSESNAS*
Ga0126311_102037671	3300010045	Serpentine Soil	VTVLAAQVRSGKQRQLNRRHAMATRDHDKDQELDPAGTHGGDTGPSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0126311_107549901	3300010045	Serpentine Soil	MMAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTSSQHGKRSGSESNAS*
Ga0126311_109136851	3300010045	Serpentine Soil	MAKRDHDKDQALDPAGAHGGDTGKSSYKDDGPPAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSESNAS*
Ga0126311_114806331	3300010045	Serpentine Soil	QDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTSSQHGKRSGSESNASQ*
Ga0126318_103015731	3300010152	Soil	CLKKGSAEMTKRRDDNTKETLDPAGARGGDTGPSEQLGSGPQAEKGDQRRHNPVHSGPTRRGAQGTDAPHGHRSGSESNASQ*
Ga0126318_108364391	3300010152	Soil	MGARSHDKDQSIDQAGEHGGDTGKSSVRGDGPDAEKGDWRRNEPVHSGPTRRGAQGTDREHGKRSGSEGNAS*
Ga0126306_104651411	3300010166	Serpentine Soil	MAKRDHDKDQDLDPAGERGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPSRRGAQGTRSEHGKRSGSESNAS*
Ga0126306_106815572	3300010166	Serpentine Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTSSEHSKRSGSESNAS*
Ga0126306_113819681	3300010166	Serpentine Soil	MSDDYIDTDKDQDLDLAGERGGDTGKTTQLGKGVQAEKGDRRRDNPVHSGPTRRGAQGTDSKHDKRSGSESNADR*
Ga0126317_109697451	3300011332	Soil	QDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS*
Ga0127502_104216342	3300011333	Soil	SRRPGGITIGCDMAKRRKDADKDQDYDPKGEHGGDTGPTAPLGSGPQAEKGDQRRGDKYHSGPTRPGAQGTDSEHGKRSGSESDENQ*
Ga0127502_109683842	3300011333	Soil	MDRARSSLTPQRRDRRQTMTHRTQRDHDKDQDIDPAGERGGDTGPSSYVGDGPQAEKGDQRRDKPVHSGPTRPNTANKSKGDKRSGSDSNESN*
Ga0136620_104871672	3300012186	Polar Desert Sand	MTDSQEKNADERYDPAGERGGDTGPSAEPAKGPQAEKGDQRRDNPVHSGPTRPGTQNNDSKHDKRSGSDSNASR*
Ga0136618_101891041	3300012188	Polar Desert Sand	MTDSQEKNADERYDPAGERGGDTGPSAEPAKGPQAEKGDQRRDTPVHSGPTRSGTQNNDSKHDKRSGSDSNASR*
Ga0150985_1060635921	3300012212	Avena Fatua Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGNGPQAEKGDLRRDTPVHSGPTRPGSQGTSSEHGKRSGSESNASR*
Ga0150985_1073359013	3300012212	Avena Fatua Rhizosphere	MARERKDNDKDQDYDPQGEFGGDTGKTAPLGSGVQAEKGDQRRQTPVHSGPTRKGAQGKHHEHSKRSGSESNADR*
Ga0150985_1111124351	3300012212	Avena Fatua Rhizosphere	MAKRDHDKDQELDPAGEHGGDTGKSSFQDDGPQAEKGDLRRHKPVHSGPTRPGSQGTDSKHDKRSGSESNASH*
Ga0150985_1143921092	3300012212	Avena Fatua Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRGGSQGTRSQHDTRSGSESNAS*
Ga0150985_1148404712	3300012212	Avena Fatua Rhizosphere	MAKRDHDKDQELDPAGAHGGDTGKSSFKGNGPQAEKGDLRRDTPVHSGPTRSGSQGTGSEHGKRSGSDSNASR*
Ga0150985_1164761731	3300012212	Avena Fatua Rhizosphere	TMANARDNDDRDQDYDPKGEYGGDTGKTDQKGKGAQAEKGDQRRDKPVHSGPSRPGSQGTRAEHDRRSGSESGARD*
Ga0150984_1056762931	3300012469	Avena Fatua Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGNGPQAEKGDLRRDTPVHSGPTRPGSQGTGSEHGKRSGSDSNA*
Ga0150984_1080453812	3300012469	Avena Fatua Rhizosphere	MAKRDHDKDQELDPAGAHGGDTGKSSFKGNGPQAEKGDLRRDTPVHSGPTRSGSQGTGSEHGKRSGSDSNA*
Ga0150984_1122309522	3300012469	Avena Fatua Rhizosphere	ARERKDNDKDQDYDPQGEFGGDTGKSAPLGSGVQAEKGDQRRQTPVHSGPTRKGAQGKHHEHSKRSGSESNADR*
Ga0150984_1122766202	3300012469	Avena Fatua Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSYKGDGHQAEKGDQRRDTPVHSGPTRRGSQGTSSQHGKRSGSESNAS*
Ga0136612_100052508	3300012680	Polar Desert Sand	MTGSQGGKAGERYDPAGERGGDTGPSAGPTKGPQAEKGDQRRANPVHSGPTRPSTQNNDCKHDKRSGSDSNASR*
Ga0136612_105215611	3300012680	Polar Desert Sand	MPGRHPDKDQDLDPAGERGGDTGNSAPKGDGPGAEKGDHRRDTPVHSGPTRGGSQGNTATKDTRSGSESNDS*
Ga0136613_104346501	3300012681	Polar Desert Sand	MGQRDHDKDQEIDQAGERGGDTGPSSKKGDGPGAEKGDWRRDKPVHSGPTRRGSQGTDSEHGKRSGSDSNAS*
Ga0136611_100061144	3300012682	Polar Desert Sand	MPGRHPDKDQDLDPAGECGGDTGKSAPKGDGPGAEKGDQRRDKPVHSGPTRGGSQGNTATKDTRSGSESNAS*
Ga0136611_100811311	3300012682	Polar Desert Sand	MPGRHPDKEQDLDPAGERGGDTGKSAPKGDGPGAEKGDQRRDTPVHSGPTRGGSQGNTATKDTRSGSGSNDS*
Ga0136611_101870931	3300012682	Polar Desert Sand	MSPRDNDKDQEIDQAGERGGDTGKSSVKGDGPGAEKGDWRRNDPVHSGPTRRGSQGTDSEHGKRSGSESNAS*
Ga0136611_107205281	3300012682	Polar Desert Sand	MPHLADGDHDKDQDIDLAGERGGDTGPTKQVGKGEQAEKGDARRDNPTHSGPTRGRDTVEGKHGDRSGSDNGASR*
Ga0157286_104256591	3300012908	Soil	MAKRDHDKDQDLDPAGAHGGGTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS*
Ga0169965_100012115	3300013012	Rock	MAKRDHDKDQEIDQAGERGGDTGPSSKKGDGPGAEKGDWRRNKPVHSGPTRRGSQGTDSEQGKRSGSDSNAS*
Ga0169969_10333633	3300013013	Rock	MGQRDHDKDQEIDQAGERGGDTGHASKKGDGPGAERGDWRRDKPVHSGPTRRGSQGSDSKHGKRSGSDSNAS*
Ga0170683_101420791	3300013027	Rock	MANSSDDRDDRDDPKGERGGDTGNPDQKGKGAQAEKGDQRRENPVHSGPTRRGSQGTDSGKKHRSGSDSGGSR*
Ga0075327_11787161	3300014272	Natural And Restored Wetlands	LAKRDHDKDQELDPAGAHGADTGKSSFKGDGPQAEMGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS*
Ga0180216_10758202	3300017648	Compost	MAKRDPDHDKDQELDPAGERGGDTGPSSYKDDGPQAEKGDLRRDTPVHSGPTRSGAKRHSRSGSDSNES
Ga0183260_101250724	3300017787	Polar Desert Sand	MTDSQEKNADERYDPAGERGGDTGPSAEPAKGPQAEKGDQRRDNPVHSGPTRPGTQNNDSKRDKRSGSDSNASR
Ga0183260_107482512	3300017787	Polar Desert Sand	MGQRDHDKDQEIDQAGERGGDTGPSSKKGDGPGAEKGDWRRDKPVHSGPTRRVSQGTDSEHG
Ga0136617_100212317	3300017789	Polar Desert Sand	MPGRNADKDQELDPAGERGGDTGPSSVKGKGSQAEKGDQRRDKPVHSGPTRQNTPSSADGYSRRTGSESNDSG
Ga0136617_100305174	3300017789	Polar Desert Sand	MTTRDRTDDHDVDQDPDPKGERGGDTGNTKQKGKGAQAEKGDQRRETPVHSGPTRGKGSAGPSSGRSGSESGGS
Ga0136617_101634812	3300017789	Polar Desert Sand	MASRDRSLDHDKDQDPDPKGERGGDTGKTDQKGKGVQAEKGDQRRETPVHGGPTRGKGGAGPDTGRTGSESNAS
Ga0136617_102905903	3300017789	Polar Desert Sand	MSDRREDKDQELDPAGERGGSTGPSVQKGKGEQAEKGDQRRDTPVHSGPTRNEKNVSSGRSGSDSNAGR
Ga0136617_103635852	3300017789	Polar Desert Sand	MTDSQEKNADERYDPAGERGGDTGPSAELAKGPQAEKGDQRRDNPVHSGPTRPGTQNNDSKHDKRSGSDSNASR
Ga0136617_111106381	3300017789	Polar Desert Sand	MSDRHQNNDKDQDEDPKGEYGGSTGNTEQLGKGVQAEKGDQRRDKPVHSGPTRSGERDTESKRDSRSGSESNADR
Ga0136617_111269302	3300017789	Polar Desert Sand	MATQDDHDKDQDPDPKGERGGDTGNTDQKGKGPQAEKGDQRRENPVHSGPTRQGVTGTASRSGHRSGSDSNASG
Ga0136617_111837681	3300017789	Polar Desert Sand	MGQRSNDKDQEIDQAGERGGDTGPSSVKGDGPGAEKGDWRRDKPVHSGPTRRGSQGTDSEHGKRSGSESNAS
Ga0190265_114901591	3300018422	Soil	DQDLDPAGEHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS
Ga0190265_129115401	3300018422	Soil	MANHADPQGATGGDTGPTKPTGKGPQAEKGDQRREPKPHGGPTRPGAQGTESEHDKRSGSESNESN
Ga0190265_132062121	3300018422	Soil	MAKRDHDKDQDLDPAGERGGDTGKSSYKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSQHDKRSGSESNAS
Ga0190275_118763791	3300018432	Soil	MATRDHDKDQDLEPAGEHGGDTGPSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS
Ga0190269_110577482	3300018465	Soil	DLDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSGSESNAS
Ga0190268_107087562	3300018466	Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSQHDKRSGSESNASQ
Ga0190270_102990792	3300018469	Soil	MAKRDHLKDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTDSKHGKRSGSESNAS
Ga0190273_122725622	3300018920	Soil	MGQRSNDKDQEIDQAGERGGDTGPSSVKGDGPGAEKGDWRRDKPVHSGPTRRGSQGTDSEHGKRSGSDSNA
Ga0190264_119224301	3300019377	Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTRSKHGKRSGSESNAS
Ga0206352_101386411	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MTKPRDDNTKETLDPAGARGGDTGPSEQLGKGPQAEKGDQRRHNPVHSGPTRQGAQGTAAPHGSRSGSESNASQ
Ga0206350_103337891	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MNARSHDKDQSIDQAGEHGGDTGPSSVRGNGPGAEKGDWRRDKPVHSGPTRRGAQGTDSEHGKRSGSASNASS
Ga0206354_101682711	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MGARSHDKDQSIDQAGEHGGDTGKSSVRGDGPDAEKGDWRRNEPVHSGPTRRGAQGTDREHGKRSGSESNAS
Ga0224712_102560531	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MGARSHDKDQSIDQAGEHGGDTGKSSVRGDGPDAEKGDWRRNEPVHSGPTRHGGQGTDREHGNRSGSESNAS
Ga0224712_103961831	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSARSHDKDQSIDQAGEHGGDTGPSSVRGNGPGAEKGDWRRDKPVHSGPTRRGAQGTDSEHGKRSGSESNASS
Ga0209818_12457651	3300027637	Agricultural Soil	MAKRDHDKDQDLDPAGERGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGAQGARSE
Ga0247820_102812872	3300028597	Soil	MPHQTQRDHDKDQDIDPAGERGGDTGKSSYVGDGPGAEKGDQRRDTPVHSGPTRPNTANTSKGDKRSGSDSDESK
Ga0307276_100374312	3300028705	Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGK
Ga0308189_101104342	3300031058	Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDNPVHSGPTRRGAQGTGRQHGKRSGSESNAS
Ga0308201_102220241	3300031091	Soil	DIDPAGAHGGDTGKSSYKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTGSQHGKRSGSESNAS
Ga0308201_103812432	3300031091	Soil	MAKRDHDKDQDLDPAGAHGGDTGKSSFKEDGPQAEKGDQRRDKPVHSGPTRRGAQGTGSQHGKRSDSKSNAS
Ga0308204_101129962	3300031092	Soil	AKRDHDKDQDLDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGGQGTGSKHGKRSGSESNAS
Ga0308204_103314001	3300031092	Soil	SVRKQHLIRRQAMAKRDHDKDQDLDPAGAHGGDTGKSSYKGNGPQAEKGDQRRDNPVHSGPTRHGSQGTGSQHGKRSGSDSNAS
Ga0272427_10019952	3300031454	Rock	MPGRNADKDQDLDPAGERGGDTGKSAPKGDGPRAEKGDQRRDTPVHSGPTRGGSQGTTGKGNKRSGSESNDSR
Ga0272434_10524791	3300031473	Rock	MGQRDHDKDQEIDQAGERGGDTGPSSVKGDGPGAEKGDWRRDKPVHSGPTRRGSQGTDSEHGKRSGSDSNAS
Ga0272434_13152871	3300031473	Rock	MPGRHPDKDQDLDPAGERGGDTGKSAPKGDGPQAEKGDQRRDTPVHSGPTRGGSQGTTGKGNKRSGSDSNDSR
Ga0307413_101789042	3300031824	Rhizosphere	MAKRDHDKDQDIDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS
Ga0307413_119403261	3300031824	Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGAQGTSSQHGKRSGSESNAS
Ga0307407_106348782	3300031903	Rhizosphere	QDIDPAGAHGGDTGKSSFKDDGPQAEKGDQRRDTPVHSGPTRRGAQGTGSKHGKRSGSESNAS
Ga0307407_112587902	3300031903	Rhizosphere	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSKHDKRSGSESNASQ
Ga0308175_1003829602	3300031938	Soil	MAQRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPVHSGPTRRGAQGTRSEHGKRSGSESNAS
Ga0308175_1007306382	3300031938	Soil	MAKRDHDKDQDIDPAGAHGGDTGKSSYKGDGPQAEKGDQRRDTPVHSGPTRRGSQGTDSQHGKRSGSESNAS
Ga0307409_1014980791	3300031995	Rhizosphere	MAKRDQDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDTPIHSGPTRRGAQGTESKHDKRSGSESNASQ
Ga0307416_1033488481	3300032002	Rhizosphere	VARDRDENDNNPNYDPKGERGGDTGKTDQAGKGVQAEKGDQRRDEPVHDGPTRRGAQWKQHEHSKRSGSESDANH
Ga0308173_122883301	3300032074	Soil	MGERSHDKDQSIDQAGEHGGDTGPSSVRGNGPGAEKGDWRRNEPVHSGPTRRGAQGTDSEHGKRSGSESNAS
Ga0268251_104393512	3300032159	Agave	MAKRDHDKDQDLDPAGAHGGDTGKSSFKGDGPQAEKGDQRRDNPVHSGPTRRGSQGTGSKHGKRSGSESNAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences