Metagenome / Metatranscriptome Family F054149

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	94 residues
Representative Sequence	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR
Number of Associated Samples	108
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.14 %
% of genes near scaffold ends (potentially truncated)	27.86 %
% of genes from short scaffolds (< 2000 bps)	87.86 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.143 % of family members)
Environment Ontology (ENVO)	Unclassified (32.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.46% β-sheet: 3.51% Coil/Unstructured: 64.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF01850	PIN	32.14
PF01988	VIT1	2.14
PF00436	SSB	1.43
PF08267	Meth_synt_1	0.71
PF13565	HTH_32	0.71
PF07690	MFS_1	0.71
PF13546	DDE_5	0.71
PF10502	Peptidase_S26	0.71
PF04986	Y2_Tnp	0.71
PF01066	CDP-OH_P_transf	0.71
PF05225	HTH_psq	0.71
PF01526	DDE_Tnp_Tn3	0.71
PF14706	Tnp_DNA_bind	0.71
PF07592	DDE_Tnp_ISAZ013	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	2.14
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	2.14
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.43
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.43
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.71
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.71
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.71
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.71
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.14 %
Unclassified	root	N/A	37.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.00 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	13.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.29 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.57 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.43 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	13.57 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	4.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.57 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.43 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	13.57 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	4.29 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.14 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	1.43 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	13.57 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	4.29 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2.14 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	1.43 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.86 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	13.57 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	4.29 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2.14 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	1.43 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10059931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1237	Open in IMG/M
3300000955\|JGI1027J12803_102047243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	505	Open in IMG/M
3300004633\|Ga0066395_10131556	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005177\|Ga0066690_10415334	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005187\|Ga0066675_11305834	Not Available	535	Open in IMG/M
3300005332\|Ga0066388_107307747	Not Available	555	Open in IMG/M
3300005347\|Ga0070668_100631561	Not Available	939	Open in IMG/M
3300005444\|Ga0070694_101769300	Not Available	526	Open in IMG/M
3300005445\|Ga0070708_100301765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300005445\|Ga0070708_100821587	Not Available	873	Open in IMG/M
3300005446\|Ga0066686_11022744	Not Available	535	Open in IMG/M
3300005467\|Ga0070706_100925252	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005471\|Ga0070698_100128470	All Organisms → cellular organisms → Bacteria	2490	Open in IMG/M
3300005764\|Ga0066903_100778192	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005764\|Ga0066903_106323668	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_107695370	Not Available	555	Open in IMG/M
3300005840\|Ga0068870_11037085	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	587	Open in IMG/M
3300005937\|Ga0081455_10018690	All Organisms → cellular organisms → Bacteria	6583	Open in IMG/M
3300006196\|Ga0075422_10244331	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006797\|Ga0066659_11410522	Not Available	582	Open in IMG/M
3300006846\|Ga0075430_100087310	All Organisms → cellular organisms → Bacteria → Proteobacteria	2610	Open in IMG/M
3300006852\|Ga0075433_10195825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1798	Open in IMG/M
3300006854\|Ga0075425_102258075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	605	Open in IMG/M
3300006865\|Ga0073934_10520656	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006871\|Ga0075434_101380364	Not Available	715	Open in IMG/M
3300006880\|Ga0075429_100458750	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300006969\|Ga0075419_10453018	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006969\|Ga0075419_11358182	Not Available	529	Open in IMG/M
3300007265\|Ga0099794_10330097	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009012\|Ga0066710_100244171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2593	Open in IMG/M
3300009012\|Ga0066710_100314097	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300009038\|Ga0099829_10288662	Not Available	1343	Open in IMG/M
3300009038\|Ga0099829_10299486	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300009038\|Ga0099829_10940147	Not Available	717	Open in IMG/M
3300009088\|Ga0099830_10531216	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300009089\|Ga0099828_10775416	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300009089\|Ga0099828_10917690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	782	Open in IMG/M
3300009090\|Ga0099827_10031700	All Organisms → cellular organisms → Bacteria	3820	Open in IMG/M
3300009090\|Ga0099827_10270848	Not Available	1431	Open in IMG/M
3300009090\|Ga0099827_10785846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	824	Open in IMG/M
3300009094\|Ga0111539_10098656	All Organisms → cellular organisms → Bacteria → Proteobacteria	3431	Open in IMG/M
3300009094\|Ga0111539_10210869	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300009100\|Ga0075418_10080215	All Organisms → cellular organisms → Bacteria → Proteobacteria	3471	Open in IMG/M
3300009100\|Ga0075418_11247513	Not Available	806	Open in IMG/M
3300009137\|Ga0066709_100114688	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300009147\|Ga0114129_10146563	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300009147\|Ga0114129_11250485	Not Available	922	Open in IMG/M
3300009156\|Ga0111538_10073318	All Organisms → cellular organisms → Bacteria → Proteobacteria	4358	Open in IMG/M
3300009553\|Ga0105249_10277446	Not Available	1672	Open in IMG/M
3300009553\|Ga0105249_10505418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1254	Open in IMG/M
3300009691\|Ga0114944_1049176	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300009792\|Ga0126374_10412557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	948	Open in IMG/M
3300009792\|Ga0126374_10883966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	691	Open in IMG/M
3300009811\|Ga0105084_1078619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	606	Open in IMG/M
3300009821\|Ga0105064_1096618	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010043\|Ga0126380_10756828	Not Available	789	Open in IMG/M
3300010043\|Ga0126380_11446265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	606	Open in IMG/M
3300010046\|Ga0126384_10467506	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300010047\|Ga0126382_10956315	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010359\|Ga0126376_10285240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1426	Open in IMG/M
3300010359\|Ga0126376_10783181	Not Available	929	Open in IMG/M
3300010359\|Ga0126376_10927298	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300010359\|Ga0126376_10954449	Not Available	853	Open in IMG/M
3300010359\|Ga0126376_11038306	Not Available	823	Open in IMG/M
3300010359\|Ga0126376_11679284	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010361\|Ga0126378_12978390	Not Available	540	Open in IMG/M
3300010362\|Ga0126377_10598298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1147	Open in IMG/M
3300010362\|Ga0126377_10913799	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010362\|Ga0126377_12967267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	547	Open in IMG/M
3300010366\|Ga0126379_11706018	Not Available	734	Open in IMG/M
3300010366\|Ga0126379_11991645	Not Available	683	Open in IMG/M
3300010366\|Ga0126379_12396876	Not Available	627	Open in IMG/M
3300011270\|Ga0137391_10538252	Not Available	985	Open in IMG/M
3300011271\|Ga0137393_10778404	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300012199\|Ga0137383_10570517	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	828	Open in IMG/M
3300012202\|Ga0137363_10891637	Not Available	755	Open in IMG/M
3300012203\|Ga0137399_11105996	Not Available	667	Open in IMG/M
3300012206\|Ga0137380_10228094	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300012209\|Ga0137379_10880137	Not Available	800	Open in IMG/M
3300012210\|Ga0137378_10948231	Not Available	774	Open in IMG/M
3300012349\|Ga0137387_10339446	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300012349\|Ga0137387_11125715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	558	Open in IMG/M
3300012357\|Ga0137384_10036294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4059	Open in IMG/M
3300012362\|Ga0137361_10201391	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300012362\|Ga0137361_11386711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	626	Open in IMG/M
3300012363\|Ga0137390_11762022	Not Available	552	Open in IMG/M
3300012912\|Ga0157306_10465430	Not Available	511	Open in IMG/M
3300012927\|Ga0137416_11297798	Not Available	657	Open in IMG/M
3300012929\|Ga0137404_10068187	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300012929\|Ga0137404_11584398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	607	Open in IMG/M
3300012930\|Ga0137407_10603702	Not Available	1030	Open in IMG/M
3300012944\|Ga0137410_10160216	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300012948\|Ga0126375_10369828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1025	Open in IMG/M
3300012971\|Ga0126369_11504491	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300012971\|Ga0126369_11971803	Not Available	672	Open in IMG/M
3300013306\|Ga0163162_13364702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	511	Open in IMG/M
3300013308\|Ga0157375_11204012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	889	Open in IMG/M
3300015371\|Ga0132258_13920068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1011	Open in IMG/M
3300017997\|Ga0184610_1215479	Not Available	642	Open in IMG/M
3300018077\|Ga0184633_10332241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	770	Open in IMG/M
3300018079\|Ga0184627_10462790	Not Available	658	Open in IMG/M
3300018466\|Ga0190268_10306607	Not Available	957	Open in IMG/M
3300019238\|Ga0180112_1256219	Not Available	561	Open in IMG/M
3300019248\|Ga0180117_1373131	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	599	Open in IMG/M
3300019249\|Ga0184648_1350565	All Organisms → cellular organisms → Bacteria → Acidobacteria	1527	Open in IMG/M
3300020065\|Ga0180113_1146165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	721	Open in IMG/M
3300020065\|Ga0180113_1346556	Not Available	564	Open in IMG/M
3300022563\|Ga0212128_10242231	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300025961\|Ga0207712_10308262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1302	Open in IMG/M
3300025961\|Ga0207712_10481492	Not Available	1058	Open in IMG/M
3300026118\|Ga0207675_100158690	Not Available	2156	Open in IMG/M
3300027324\|Ga0209845_1060982	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027490\|Ga0209899_1045070	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300027873\|Ga0209814_10173414	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300027882\|Ga0209590_10204095	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300027903\|Ga0209488_10083635	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300027907\|Ga0207428_10118694	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300028597\|Ga0247820_10330212	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300030829\|Ga0308203_1075481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	547	Open in IMG/M
3300031058\|Ga0308189_10193244	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031091\|Ga0308201_10245461	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031092\|Ga0308204_10309795	Not Available	531	Open in IMG/M
3300031093\|Ga0308197_10076069	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300031094\|Ga0308199_1016436	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300031114\|Ga0308187_10312426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	593	Open in IMG/M
3300031229\|Ga0299913_11534413	Not Available	619	Open in IMG/M
3300031562\|Ga0310886_10923866	Not Available	556	Open in IMG/M
3300032012\|Ga0310902_10590769	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300032180\|Ga0307471_101453560	Not Available	845	Open in IMG/M
3300032180\|Ga0307471_104312092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	502	Open in IMG/M
3300032205\|Ga0307472_102719507	Not Available	506	Open in IMG/M
3300033550\|Ga0247829_11304118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	601	Open in IMG/M
3300034643\|Ga0370545_149289	Not Available	538	Open in IMG/M
3300034644\|Ga0370548_121527	Not Available	546	Open in IMG/M
3300034659\|Ga0314780_086041	Not Available	694	Open in IMG/M
3300034662\|Ga0314783_131917	Not Available	562	Open in IMG/M
3300034669\|Ga0314794_018154	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300034673\|Ga0314798_059137	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300034676\|Ga0314801_179458	Not Available	530	Open in IMG/M
3300034681\|Ga0370546_080207	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.14%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	7.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.43%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.14%
Sediment	Environmental → Aquatic → Sediment	2.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.57%
Sand	Environmental → Terrestrial → Soil → Sand	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.43%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.14%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.71%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.14%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.43%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_100599311	3300000550	Soil	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
JGI1027J12803_1020472432	3300000955	Soil	GRQKAAARRVLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0066395_101315562	3300004633	Tropical Forest Soil	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPQGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0066690_104153342	3300005177	Soil	MGTRSLEQVLAEVKRLSLAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFTPVVVRGQPVSETLIEERR*
Ga0066675_113058341	3300005187	Soil	MVAQDRCIDVAGGLCPQRTAAPRVLGGSKAPETGQEREWEMGTRSLEQVLAEVKRLSLAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFT
Ga0066388_1073077472	3300005332	Tropical Forest Soil	AARWVLGEGGAPAAGKEREWEMETVSLAQVLAEVKMLSQEEQQQLFDTVERWLRHDRPEDRLEDVLAEAGLLRARRPRGEDTTPSTAFTPVAVRGQPVSETLIEERR*
Ga0070668_1006315611	3300005347	Switchgrass Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRAEDRLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIEERR*
Ga0070694_1017693001	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRPDRPEDRLEDVLAEAGLLRAPHTRGWGTAPLTAFTPIAVRGQPVSETLIKERR*
Ga0070708_1003017652	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSLEQVLAEVQRLSQAEQQQLRDILDQWLRHDRPEDRLEEALAEAGLLCARPPQEGNTVSPTAFTPVAVRGQPVSETLIEERR*
Ga0070708_1008215872	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGTIRLEQVLAEVKLLSQEEQQQLRDTLERWLRHDQPEDRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLIEERR*
Ga0066686_110227441	3300005446	Soil	MARALGEGSTPESAQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRPDRPEDRLEDVLAEGGLLRARHPRGGDTAPPTA
Ga0070706_1009252522	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSSLEHVLAAVQQLSRQEQQQLRDTLDQWLRPERPEERLEASLAEAGLLRARRAPAADRAPSPSFTPVVVRGQPVSETLLEERR*
Ga0070698_1001284704	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGIMSLEQVLAEVQRLSQAEQQQLRDILDQWLRHDRPEDRLEEALAEAGLLCARPPQEGNTVSPTAFTPVAVRGQPVSETLIEERR*
Ga0066903_1007781922	3300005764	Tropical Forest Soil	MDCSPSLQPAGIAWEWDMSTMSLEQVLAEVQRLSQAEQQQLRNILDQWLRHDRPEDRLEEVLAEAGLLRARRPQDGNTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0066903_1063236682	3300005764	Tropical Forest Soil	METRSLEQVLAEVKRLSQAEQQQLRDTLDRWLRHDRPEDHLEDVLAEAGLLRARRPRGGDTAPPASFTPVVVQGQPVSETLIEERR*
Ga0066903_1076953701	3300005764	Tropical Forest Soil	MGTIRLEQVLAEVKLLPPEEQQQLRDTLDQWLRHARPEDRLDDVLVEAGLLRAQRPRDEDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0068870_110370851	3300005840	Miscanthus Rhizosphere	LLSREEQQQLRDTLDRWLRPDRPEDRLEDVLAEAGLLRAPHTRGWGTAPLTAFTPIAVRGQPVSETLIKERR*
Ga0081455_100186904	3300005937	Tabebuia Heterophylla Rhizosphere	MGTIRLEQVLAAVKLLSLEEQQQLRDTLEQWLRHARPEDRLADVLVEAGLLRAQRPRDEDTAPPTTFTPVAVRGQPVSETLIEERR*
Ga0075422_102443312	3300006196	Populus Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR*
Ga0066659_114105222	3300006797	Soil	MVAQDRCIDVAGGLCPQRTAAPRVLGGSKAPETGQEREWEMGTRSLEQVLAEVKRLSLAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFTPVVVRGQPVSETLIEERR*
Ga0075430_1000873103	3300006846	Populus Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR*
Ga0075433_101958252	3300006852	Populus Rhizosphere	VLGKSSAPAPGQEREGEMGTIRLEHVLAEVKLLSPEEQQQLRDTLDQWLRHARPEDRLEDVLVEAGLLRAQRRRGEDTAPPTAFTPVAVR
Ga0075425_1022580751	3300006854	Populus Rhizosphere	GASARQRTAAQRVLGGSSAPEAGQAREWEMVTRSLEQVLAEVKMLSQAEQRQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPQDGDTVLPASFTPVVVRGQPVSETLIEERR*
Ga0073934_105206562	3300006865	Hot Spring Sediment	MGTVSLEDVVAEVQRLSPVEQQQLRDTLDQWLRSERPEDRLEAMLAEAGLLRARRPQGTDTAPPTAFTPVVVRGQPVSETLIEERR*
Ga0075434_1013803641	3300006871	Populus Rhizosphere	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHAWPEDRLEDVLVEAGLLRARRPRGEGTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0075429_1004587502	3300006880	Populus Rhizosphere	LGEGSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLERWLRRDRPEDRLEDDLVEAGLLRARHPQGEETASLTAFTPVTVRGQPVSETLIAERR*
Ga0075419_104530182	3300006969	Populus Rhizosphere	VLAEVKLLSPEEQQQLRDTLDQWLRHARPEDRLEDVLVEAGLLRAQRRRGEDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0075419_113581821	3300006969	Populus Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEDDLVEAGLLRARHPQGEETASLTAFTPVTVRGQPVSETLIAERR*
Ga0099794_103300971	3300007265	Vadose Zone Soil	EREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPADRLEDVLVEAGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0066710_1002441713	3300009012	Grasslands Soil	MARALGEGSTPESAQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEAILTEAGLLRARRPQGEDMAPPTAFTPVAVRGQPVSETLLEERR
Ga0066710_1003140973	3300009012	Grasslands Soil	MVAQDRCIDVAGGLCPQRTAAPRVLGGSKAPETGQEREWEMGTRSLEQVLAEVKRLSLAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFTPVVVRGQPVSETLIEERR
Ga0099829_102886621	3300009038	Vadose Zone Soil	VFGEGSAPEAGKEREWDMGIVSLEQVLAEVKRLSQEEQQQLRDTLNRWLRHDRPEDRLEDVLAAAGLLRARRPREGDTAPPTAFTPVAVRGQPVSETLIEERR
Ga0099829_102994861	3300009038	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPEDRLEDVLVEAGLLRARRPRRSETPPLTAFTPVVVRGQPVSETLIEERR*
Ga0099829_109401471	3300009038	Vadose Zone Soil	MGTVSLEQVLAEVKLLSQEEQQQLRDTLDRWLRPDRPEDRLEDVLAEGGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0099830_105312161	3300009088	Vadose Zone Soil	VFGEGSAPEAGKEREWDMGIVSLEQVLAEVKRLSQEEQQQLRDTLNRWLRHDRREDRLEDVLAAAGLLRARRPREGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0099828_107754161	3300009089	Vadose Zone Soil	EREWDMGIVSLEQVLAEVKRLSQEEQQQLRDTLNRWLRHDRPEDRLEDVLAAAGLLRARRPREGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0099828_109176901	3300009089	Vadose Zone Soil	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRPDRPEDRLEDVLAEGGLLRARHPRGGDTAPLTAFTPVAVRGQPVSETLIEERR*
Ga0099827_100317003	3300009090	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPEDRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLIEERR*
Ga0099827_102708482	3300009090	Vadose Zone Soil	VFGEGSAPEAGKEREWDMGIVSLEQVLAEVKRLSQEEQQQLRDTLNRWLRHDRPEDRLEDVLAAAGLLRARRPREGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0099827_107858461	3300009090	Vadose Zone Soil	VLGEDSAPEAGKERKWEMGTMSLEQVLAEVQMLSQAEQQQLRDILDRWLRHDRPEDCLEAVLADAGLLRARRPWEGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0111539_100986563	3300009094	Populus Rhizosphere	VLGEGSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR*
Ga0111539_102108691	3300009094	Populus Rhizosphere	VLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRAQRRRGEDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0075418_100802154	3300009100	Populus Rhizosphere	VLGEGSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR*
Ga0075418_112475131	3300009100	Populus Rhizosphere	MGTVSLEQVFAVVKLLSREEQQQLRDTLDRWLRPDRPEDRLEDVLADAGLLRAPHTRGGGTAPPTAFTPIAVRGQPVSETLIEERL*
Ga0066709_1001146883	3300009137	Grasslands Soil	MARALGEGSTPESAQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEAILTEAGLLRARRPQGEDMAPPTAFTPVVVRGQPVSETLLEERR*
Ga0114129_101465635	3300009147	Populus Rhizosphere	VVCRQQTAARRVLGEGSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLERWLRRDRPEDRLEDDLVEAGLLRARHPQGEETASLTAFTPVTVRGQPVSETLIAERR*
Ga0114129_112504851	3300009147	Populus Rhizosphere	MVAQDRCIDVAGGLCPQRTAAPRVLGGSKAPETGQEREWEMGTRSLEQVLAEVKRLSLAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFTPVVVRGQPVSETLLEERR*
Ga0111538_100733183	3300009156	Populus Rhizosphere	VLGEGSTPDVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR*
Ga0105249_102774462	3300009553	Switchgrass Rhizosphere	VGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRAEDRLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIEERR*
Ga0105249_105054182	3300009553	Switchgrass Rhizosphere	MASQDRCVDVAGGLCRQRTAAQRVLGGSKTPEAGQEREWEMGTRSLEQVLAEVQKLSLAEQQQLRDTLDWWLRHDRPEDRLEDVLAEAGLLRAHRPRGGDTALPASITPVVVRGQPVSETLLEERR*
Ga0114944_10491762	3300009691	Thermal Springs	MGTMSLEQVLAEVQRLSQAEQLQLRDILDHWLRHDRPENRLEEVLAEAGLLRTRRPPGGDTAPPTAFTPVAVRGKPVSETLIEERR*
Ga0126374_104125572	3300009792	Tropical Forest Soil	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEGTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126374_108839661	3300009792	Tropical Forest Soil	VLGEGSTPAAGQEREWEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPLGEETALPTAFTPVAVRGQPVSETLIEERR*
Ga0105084_10786192	3300009811	Groundwater Sand	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEVLAEAGLLRARHPLGEETAPPMAFTPVTVRGQPVSETLIEERR*
Ga0105064_10966181	3300009821	Groundwater Sand	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEEMAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126380_107568282	3300010043	Tropical Forest Soil	VLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDQWLRHARPEDRLEDVLVEAGLLHARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126380_114462652	3300010043	Tropical Forest Soil	MGTIRLEQVLAEVKLLSQAEQQQLRDTLDRWLRHNQPEDRLEDVLVEAGLLRARRPRGEDPVPLTAFTPVVVRGQPVSETLIKERR*
Ga0126384_104675063	3300010046	Tropical Forest Soil	MPAVGQEREWEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPLGEETALPTAFTPVAVRGQPVSETLIEERR*
Ga0126382_109563152	3300010047	Tropical Forest Soil	MGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLHARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126376_102852402	3300010359	Tropical Forest Soil	VLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLPYSRYRWLRHTRPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126376_107831811	3300010359	Tropical Forest Soil	MSLEQVLAEVQRLSQAEQQQLRDILDQWLRHDRPEDRLEEVLAEAGLLRARRPQEGNTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126376_109272981	3300010359	Tropical Forest Soil	APGQEREGEMGTIRLEHVLAEVKLLSLEEQQQLRDTLEQWLRHARPEDRLADVLVEAGLLRAQRPRDEDTAPPTTFTPVAVRGQPVSETLIEERR*
Ga0126376_109544491	3300010359	Tropical Forest Soil	MGTRRLEHVLAEVKKLSQAEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDTALPASFTPVVVRGQPVSETLIEERR*
Ga0126376_110383061	3300010359	Tropical Forest Soil	MAVQDRCVDVAGGLCSPEDCAQRVRGGSNAPEEGQEREGEMGTRSREHVLAEVKMVSLAEPQQVRDTLNRWLRYDRPADRVEDVLAEAGLLRACRPQGGDTAPPVSCTPVVGAV*
Ga0126376_116792842	3300010359	Tropical Forest Soil	ERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHERPEDRLENVLMEAGLLRARRPQGEDTVPSTAFILVTVRGQPVSETLIEERR*
Ga0126378_129783902	3300010361	Tropical Forest Soil	VLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETSPPTAFTPVAVRGQPVSETLIEERR*
Ga0126377_105982981	3300010362	Tropical Forest Soil	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRLEDRLEEALAEAGLLRARHPLGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126377_109137992	3300010362	Tropical Forest Soil	VLGEGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126377_129672672	3300010362	Tropical Forest Soil	PHERSEHQETAAWQVLGKRSAPALGQEREGEMGTIRLEHVLAEVKLLSPEEQQQLRDTLDQWLRHARPEDRLADVLVEAGLLRAQRPRDEDTAPPTTFTPVAVRGQPVSETLIEERR*
Ga0126379_117060181	3300010366	Tropical Forest Soil	MGTIRLEHVLAEVKLLPPEEQQQLRDTLDQWLRHARPEDRLEDVLVEAGLLRARRSRGEDTAPPPAFTPVAVRGQPVSETLIEE
Ga0126379_119916452	3300010366	Tropical Forest Soil	QEERRRYHPMTAARQVFGESRAAAVGKEREWEMGIVSLAQVLAEVKMLSQEEQQQLFDTLERWLRHDRPEDRLEDVLAEAGLLRARRSRGEDTAPPPAFTPVAVRGQPVSETLIEERR*
Ga0126379_123968761	3300010366	Tropical Forest Soil	MSLEQVLAEVQRLSQAEQQQLRDILDQWLRHDRPEDRLEKVLAEAGLLRARRPQEGNTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137391_105382522	3300011270	Vadose Zone Soil	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEGGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137393_107784041	3300011271	Vadose Zone Soil	EVKRLSQEEQQQLRDTLNRWLRHDRPEDRLEDVLAAAGLLRARRPREGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137383_105705172	3300012199	Vadose Zone Soil	MGARSLEQVLAEVKMLSQEEQQQLRDTLDRWLSRDRPENRLEDVLAEAGLLRARRPQGGDTAPRPSFTPVAVRGQPVSETLIEERR*
Ga0137363_108916371	3300012202	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPADRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLIEERR*
Ga0137399_111059961	3300012203	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEVLAEAGLLRARHPLGEETAPPTAFTPVTVRGQPVSETLIEERR*
Ga0137380_102280943	3300012206	Vadose Zone Soil	MARALGEGSTPESAQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEAILTEAGLLRARRPQGEDMAPPTAFTPVAVRGQPVSETLLEERR*
Ga0137379_108801372	3300012209	Vadose Zone Soil	VLGAGSTPEAVHEREREMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEDSLTEAGLLRARRPQGEDRTPPTAFTPIAVRGQPVSETLIEERR*
Ga0137378_109482311	3300012210	Vadose Zone Soil	VLGAGSTPEAVHEREREMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDIAPPVSFTPVVVRGQPVSET
Ga0137387_103394463	3300012349	Vadose Zone Soil	LSQEEQQQLRDTLDRWLRHDRPEDRLEAILTEAGLLRARRPQGEDMAPPTAFTPVAVRGQPVSETLLEERR*
Ga0137387_111257151	3300012349	Vadose Zone Soil	MGTVSLEQVLAEVKLLSQEEQRQLRDTLDRWLRPDRPEDRLEDVLAEGGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137384_100362945	3300012357	Vadose Zone Soil	MGARGLEQVLAEVKMLSQEEQQQLRDTLDRWLPRDRPEDRLEDVLAEAGLLRARRPQGGDTAPRPSFTPVAVRGQPVSETLIEERR*
Ga0137361_102013912	3300012362	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPADRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLIEEGR*
Ga0137361_113867111	3300012362	Vadose Zone Soil	MGTVSLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137390_117620221	3300012363	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPEDRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLI
Ga0157306_104654301	3300012912	Soil	MGTVSLEQVFAAVKLLSREEQQQLRDTLDRWLRPDRPEDRLEDVLAEAGLLRAPHTRGWGTAPLTAFTPIAVRGQPVSETLIKERR*
Ga0137416_112977982	3300012927	Vadose Zone Soil	VLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEVLAEAGLLRARHPLGEETAPPTAFTPVTVRGQPVSETLIEERR*
Ga0137404_100681872	3300012929	Vadose Zone Soil	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137404_115843982	3300012929	Vadose Zone Soil	MGTVSLEQVLAEVKLLSQEEQQQLRDTLDRWLRPDRPEEGLEDVLAEGGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0137407_106037022	3300012930	Vadose Zone Soil	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRAPRPRGEDTAPPSSFTPVTVRGRPVSETLIEERR*
Ga0137410_101602161	3300012944	Vadose Zone Soil	DPREWSGCQRTAALWVLGEGSAPEVGQEREWEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHDQPADRLEDVLVEAGLLRARRPRGEETAPLTAFTPVVVRGQPVSETLIEERR*
Ga0126375_103698281	3300012948	Tropical Forest Soil	VLGEGSTPAAGQERESEMGTIRLEHVLAKVKLLAQEEQKQLRDTLDRLLRHARPEDRLEDVLVEAGLLRARRPRGEGTAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126369_115044911	3300012971	Tropical Forest Soil	QTAAPRVLGEGSMPAAGQEREGEMGTIRLEQVLTEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPQGEETAPPTAFTPVAVRGQPVSETLIEERR*
Ga0126369_119718032	3300012971	Tropical Forest Soil	MGTIRLEHVLAEVKLLSPEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEGTAPPTAFTPVAVRGQPVSETL
Ga0163162_133647021	3300013306	Switchgrass Rhizosphere	DVAGGLCRQRTAAQRVLGGSKTPEAGQEREWEMGTRSLEQVLAEVQKLSLAEQQQLRDTLDWWRRHDRPEDRLEDVLAEAGLLRAHRPRGGDTALPASITPVVVRGQPVSETLLEERR*
Ga0157375_112040122	3300013308	Miscanthus Rhizosphere	VLGEGSTPAAGQERESEMGIIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARHPRGEETAPPTAFTPVTVRGQPVSETLIEERR*
Ga0132258_139200682	3300015371	Arabidopsis Rhizosphere	VLGEGSTPAVGQEREWEMGTIRLEQVLVEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPLGEETAPPMAFTPVTVRGQPVSETLIEERR*
Ga0184610_12154791	3300017997	Groundwater Sediment	METMSLEQVLAEVQRLSQAEQQQLRDILEQWLRHDRPEDRLEDVLAEAGLLRARRPQGGDTAPPTTFTPVAVRGQPVSETLIEERR
Ga0184633_103322412	3300018077	Groundwater Sediment	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRTRRPQGGDTAPPTSFTPVAVRGQPVSETLIEERR
Ga0184627_104627901	3300018079	Groundwater Sediment	METMSLEQVLAEVQRLSQAEQQQLRDILEQWLRHDRPEDRLEDVLAEAGLLRARRPRGGDTAPPTAFTPVAVR
Ga0190268_103066071	3300018466	Soil	MGTVSLEQVFAVVKLLSREEQRQLRDTLDRWLRPDRPEDRLEDVLADAGLLRAPHTRGGGTAPPTAFTPIAVRGQPVSETLIEERL
Ga0180112_12562192	3300019238	Groundwater Sediment	MGTVSLEQVFAEVKLLSREEQQQLRDTLDRWLRPDRPEDRLEDILAEAGLLRAPHTRGGGTAPPTAFTPIAVRGQPVSETLIEERR
Ga0180117_13731312	3300019248	Groundwater Sediment	SGRQQTAAGQVLGDGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHERPNDRLEEVLAEAGLLRARHPQGEETALLTAFTPVAVRGQPVSETLIEERR
Ga0184648_13505653	3300019249	Groundwater Sediment	MGTGSLEQVLAEVKRLSQEEQQQLRDTLDRWLRHDRPEDRLEDVLAEAGLLRARRPRGGDTPPPTAFIPVVVRGQPVSETLIEERR
Ga0180113_11461651	3300020065	Groundwater Sediment	VLGDGSTPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHERPKDRLEEVLAEAGLLRARHPQGEETALLTAFTPVAVRGQPVSETLIEERR
Ga0180113_13465561	3300020065	Groundwater Sediment	AREWEMGTVSLEQVFAEVKLLSREEQQQLRDTLDRWLRPDRPEDRLEDVLAEAGLLRAPHTRGGGTAPPTAFTPIAVRGQPVSETLIEERR
Ga0212128_102422312	3300022563	Thermal Springs	MGTMSLEQVLAEVQRLSQAEQLQLRDILDHWLRHDRPENRLEEVLAEAGLLRTRRPPGGDTAPPTAFTPVAVRGKPVSETLIEERR
Ga0207712_103082622	3300025961	Switchgrass Rhizosphere	MASQDRCVDVAGGLCRQRTAAQRVLGGSKTPEAGQEREWEMGTRSLEQVLAEVQKLSLAEQQQLRDTLDWWRRHDRPEDRLEDVLAEAGLLRAHRPRGGDTALPASITPVVVRGQPVSETLLEERR
Ga0207712_104814922	3300025961	Switchgrass Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRAEDRLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIEERR
Ga0207675_1001586903	3300026118	Switchgrass Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIEERR
Ga0209845_10609821	3300027324	Groundwater Sand	AEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEETAPPTAFTPVAVRGQPGDP
Ga0209899_10450702	3300027490	Groundwater Sand	EGKGWEMGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEETAPPTAFTPVAVRGQPVSETLIEERR
Ga0209814_101734141	3300027873	Populus Rhizosphere	IRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRAQRPLGEETAPPTAFTPVAVRGQPVSQTLIEERR
Ga0209590_102040952	3300027882	Vadose Zone Soil	MSLEQVLAEVQMLSQAEQQQLRDILDRWLRHDRPEDCLEAVLADAGLLRARRPWEGDTAPPTAFTPVAVRGQPVSETLIEERR
Ga0209488_100836351	3300027903	Vadose Zone Soil	MGTVSLEQVLAEVKLLSQEEQQQLRDTLDRWLRPDRPEDRLEDVLAEGGLLRARHPRGGDTAPPTAFTPVAVRGQPVSETLIEERR
Ga0207428_101186943	3300027907	Populus Rhizosphere	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0247820_103302122	3300028597	Soil	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0308203_10754811	3300030829	Soil	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPRGEETAPPMAFTPVTVRGQPVSETLIEERR
Ga0308189_101932442	3300031058	Soil	LEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEEMAPPTAFTPVAVRGQPVSATLIEERR
Ga0308201_102454612	3300031091	Soil	GTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPLGEETAPPMAFTPVTVRGQPVSETLIEERR
Ga0308204_103097952	3300031092	Soil	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEALAEAGLLRARHPLGEETAPPTAFTPVTVRGQPVSETLIEERR
Ga0308197_100760693	3300031093	Soil	AEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEEMAPPTAFTPVAVRGQPVSATLIEERR
Ga0308199_10164362	3300031094	Soil	MGTMSLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEEMAPPTAFTPVAVRGQPVSATLIEERR
Ga0308187_103124262	3300031114	Soil	MGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDRPEDRLEEVLAEAGLLRARHPLGEETAPPTAFTPVTVRGQPVSETLIEERR
Ga0299913_115344132	3300031229	Soil	MENIGLEQVLAAVKLLSQEEQQQLRETLDRWLRHDRPEDHLEDVLAEAGLLRARRPQGGGIAPPSSFTPVAVRGRPVSETLIEERR
Ga0310886_109238661	3300031562	Soil	MGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRHDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0310902_105907692	3300032012	Soil	ARRVLGEGSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0307471_1014535602	3300032180	Hardwood Forest Soil	MGPIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPRTAFTPVTVRGQPVSETLIAERR
Ga0307471_1043120921	3300032180	Hardwood Forest Soil	WPPESCSTAGARRPAAGQERESEMGTIRLEHVLAEVKLLSQEEQQQLRDTLDRWLRHARPEDRLEDVLVEAGLLRARRPRGEETAPPTVFTPVAVRGQPVSETLIEERR
Ga0307472_1027195071	3300032205	Hardwood Forest Soil	MGTIRLEHVLAEVKLLSPEEQQQLRDTLDRWLRHARPEECLEDDLVEAGLLRARHPQGEETAPLTAFTPVTVRGQPVSETLIEERR
Ga0247829_113041181	3300033550	Soil	GSTPAVGQERESEMGTIRLEQVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0370545_149289_130_441	3300034643	Soil	VLGEGSTPAAGQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDQWLRHDRPEDRLEEALAEAGLLRARHPLGEETAPPMAFTPVTVRGQPVSETLIEERR
Ga0370548_121527_189_449	3300034644	Soil	MGTIRLEQVLAEVKMLSQEEQQQLRDTLDRWLRHDRLEDRLEDVLAEAGLLRPRRPRGEEMAPPTAFTPVAVRGQPVSATLIEERR
Ga0314780_086041_283_543	3300034659	Soil	MGTVSLEQVFAVVKLLSREEQQQLRDTLDRWLRPDRPEDRLEDVLADAGLLRAPHTRGGGTAPPTAFTPIAVRGQPVSETLIEERL
Ga0314783_131917_12_272	3300034662	Soil	MGTVSLEQVFAVVKLLSREEQQQLRDTLDRWLRPDRPEDRLEGVLAEAGLLRARHPLGEETAPPTAFTPVTIRGQPVSETLIEERL
Ga0314794_018154_140_400	3300034669	Soil	MGTVSLEQVFAVVKLLSREEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0314798_059137_471_731	3300034673	Soil	MGTIRLEHVLAEVKLLSPEEQQQLRDTLDRWLRRDRPEDRLEDDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0314801_179458_13_273	3300034676	Soil	MGTVSLEQVLAEVKRLSQEEQQQLRDTLDRWLRRDRPEDRLENDLVEAGLLHARHPQGEETAPLTAFTPVTVRGQPVSETLIAERR
Ga0370546_080207_99_392	3300034681	Soil	MPAAGQEREWEMGTIRLEQVLAEVKLLSQEEQQQLRDTLDRWLRHDQPEDRLEDVLVEAGLLRARRPRGEETAPPTAFTPVAVRGQPVSDTLIEERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences