NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F054165

Metagenome / Metatranscriptome Family F054165

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F054165
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 75 residues
Representative Sequence QGTGTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA
Number of Associated Samples 123
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.72 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 93.57 %
Associated GOLD sequencing projects 115
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.286 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.714 % of family members)
Environment Ontology (ENVO) Unclassified
(54.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.429 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.86%    β-sheet: 49.52%    Coil/Unstructured: 47.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF03401TctC 25.71
PF13472Lipase_GDSL_2 1.43
PF13602ADH_zinc_N_2 1.43
PF12706Lactamase_B_2 1.43
PF01075Glyco_transf_9 1.43
PF04909Amidohydro_2 1.43
PF14815NUDIX_4 0.71
PF07879PHB_acc_N 0.71
PF14539DUF4442 0.71
PF00903Glyoxalase 0.71
PF00440TetR_N 0.71
PF00264Tyrosinase 0.71
PF00067p450 0.71
PF00248Aldo_ket_red 0.71
PF10503Esterase_PHB 0.71
PF02535Zip 0.71
PF00296Bac_luciferase 0.71
PF13358DDE_3 0.71
PF08240ADH_N 0.71
PF030614HBT 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 25.71
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 1.43
COG0428Zinc transporter ZupTInorganic ion transport and metabolism [P] 0.71
COG2124Cytochrome P450Defense mechanisms [V] 0.71
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.71
COG5394Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHASignal transduction mechanisms [T] 0.71

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.29 %
UnclassifiedrootN/A5.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_12284459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium681Open in IMG/M
3300001213|JGIcombinedJ13530_108786620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium614Open in IMG/M
3300002568|C688J35102_117896699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium514Open in IMG/M
3300002568|C688J35102_120194619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium921Open in IMG/M
3300003911|JGI25405J52794_10146850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium537Open in IMG/M
3300005186|Ga0066676_11078034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium530Open in IMG/M
3300005295|Ga0065707_10274010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB231064Open in IMG/M
3300005331|Ga0070670_102091601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300005337|Ga0070682_100105684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1867Open in IMG/M
3300005340|Ga0070689_101856303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300005353|Ga0070669_100230506All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300005365|Ga0070688_100117979All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300005367|Ga0070667_101159944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.723Open in IMG/M
3300005441|Ga0070700_101262913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300005455|Ga0070663_100081013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2385Open in IMG/M
3300005455|Ga0070663_100749804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria833Open in IMG/M
3300005539|Ga0068853_100745775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria936Open in IMG/M
3300005545|Ga0070695_100853664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria733Open in IMG/M
3300005548|Ga0070665_102471630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium521Open in IMG/M
3300005560|Ga0066670_10430375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria812Open in IMG/M
3300005564|Ga0070664_100899156All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria830Open in IMG/M
3300005618|Ga0068864_100522928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1144Open in IMG/M
3300005718|Ga0068866_11396434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium512Open in IMG/M
3300005834|Ga0068851_10531283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria709Open in IMG/M
3300005834|Ga0068851_10646716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense647Open in IMG/M
3300005840|Ga0068870_10779224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria666Open in IMG/M
3300005841|Ga0068863_101998969All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria590Open in IMG/M
3300006038|Ga0075365_11073152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium567Open in IMG/M
3300006186|Ga0075369_10393295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium653Open in IMG/M
3300006353|Ga0075370_10273517All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300006574|Ga0074056_11757116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria682Open in IMG/M
3300006581|Ga0074048_12730042All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300006796|Ga0066665_11085142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium610Open in IMG/M
3300006954|Ga0079219_10288526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1007Open in IMG/M
3300006954|Ga0079219_12098722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium541Open in IMG/M
3300009078|Ga0105106_10709648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium718Open in IMG/M
3300009098|Ga0105245_10283253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1621Open in IMG/M
3300009098|Ga0105245_10997269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23882Open in IMG/M
3300009100|Ga0075418_12994933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium515Open in IMG/M
3300009137|Ga0066709_103671104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300009147|Ga0114129_11026486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1037Open in IMG/M
3300009148|Ga0105243_10558650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1095Open in IMG/M
3300009174|Ga0105241_10585366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1006Open in IMG/M
3300009176|Ga0105242_11631692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria679Open in IMG/M
3300009545|Ga0105237_11180755All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria772Open in IMG/M
3300009545|Ga0105237_12711382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium507Open in IMG/M
3300009551|Ga0105238_10435602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1307Open in IMG/M
3300009551|Ga0105238_10448566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1287Open in IMG/M
3300009840|Ga0126313_11883437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300010036|Ga0126305_11113429All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria544Open in IMG/M
3300010037|Ga0126304_10540829All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300010044|Ga0126310_11722596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium521Open in IMG/M
3300010371|Ga0134125_10236172Not Available2032Open in IMG/M
3300010371|Ga0134125_11295468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23795Open in IMG/M
3300010375|Ga0105239_11884267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium693Open in IMG/M
3300010375|Ga0105239_13062340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales545Open in IMG/M
3300010399|Ga0134127_10205114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense1836Open in IMG/M
3300010399|Ga0134127_11797842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria689Open in IMG/M
3300010401|Ga0134121_11034022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium809Open in IMG/M
3300010401|Ga0134121_12684140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria543Open in IMG/M
3300010403|Ga0134123_11818112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium663Open in IMG/M
3300011119|Ga0105246_10765373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria853Open in IMG/M
3300011414|Ga0137442_1015199Not Available1264Open in IMG/M
3300011436|Ga0137458_1020927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1608Open in IMG/M
3300012034|Ga0137453_1098936All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300012040|Ga0137461_1212178Not Available567Open in IMG/M
3300012362|Ga0137361_11948571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense504Open in IMG/M
3300012514|Ga0157330_1051724All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium585Open in IMG/M
3300012685|Ga0137397_10105783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii2065Open in IMG/M
3300012908|Ga0157286_10082505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria906Open in IMG/M
3300012924|Ga0137413_11763150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium510Open in IMG/M
3300012925|Ga0137419_11440050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0160582Open in IMG/M
3300012931|Ga0153915_11125805All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. ST 5-3916Open in IMG/M
3300012987|Ga0164307_10032588All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2835Open in IMG/M
3300012988|Ga0164306_10491437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria942Open in IMG/M
3300013100|Ga0157373_10803554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium694Open in IMG/M
3300013297|Ga0157378_10933418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium900Open in IMG/M
3300013297|Ga0157378_12550157All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300013306|Ga0163162_10108970All Organisms → cellular organisms → Bacteria → Proteobacteria2866Open in IMG/M
3300013308|Ga0157375_11403670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense823Open in IMG/M
3300014326|Ga0157380_10234573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1650Open in IMG/M
3300014326|Ga0157380_10422597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1272Open in IMG/M
3300014968|Ga0157379_10280938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1515Open in IMG/M
3300015373|Ga0132257_101054562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1024Open in IMG/M
3300015373|Ga0132257_103565861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium566Open in IMG/M
3300017792|Ga0163161_10490643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23999Open in IMG/M
3300017965|Ga0190266_10057276All Organisms → cellular organisms → Bacteria → Proteobacteria1413Open in IMG/M
3300018056|Ga0184623_10483423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium531Open in IMG/M
3300018064|Ga0187773_10082360Not Available1550Open in IMG/M
3300018066|Ga0184617_1238116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium545Open in IMG/M
3300018084|Ga0184629_10310547Not Available830Open in IMG/M
3300018089|Ga0187774_11280681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium530Open in IMG/M
3300018432|Ga0190275_12822228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium562Open in IMG/M
3300018482|Ga0066669_12148192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium528Open in IMG/M
3300019362|Ga0173479_10447367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium637Open in IMG/M
3300021090|Ga0210377_10696107Not Available560Open in IMG/M
3300022756|Ga0222622_11188858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium561Open in IMG/M
3300022889|Ga0247785_1029987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria635Open in IMG/M
3300022910|Ga0247768_1136556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium748Open in IMG/M
3300023275|Ga0247776_10371642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WYCCWR 12774526Open in IMG/M
3300025227|Ga0207638_1003313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium639Open in IMG/M
3300025321|Ga0207656_10245569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense876Open in IMG/M
3300025899|Ga0207642_10157275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense1216Open in IMG/M
3300025909|Ga0207705_10890540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium690Open in IMG/M
3300025911|Ga0207654_11219201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria548Open in IMG/M
3300025923|Ga0207681_10535815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria962Open in IMG/M
3300025931|Ga0207644_11227774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria630Open in IMG/M
3300025933|Ga0207706_10585727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium959Open in IMG/M
3300025933|Ga0207706_10622742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23926Open in IMG/M
3300025934|Ga0207686_11193533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria623Open in IMG/M
3300025935|Ga0207709_10172438All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601519Open in IMG/M
3300025938|Ga0207704_11108342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium673Open in IMG/M
3300025949|Ga0207667_11031627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria808Open in IMG/M
3300025981|Ga0207640_11811408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium552Open in IMG/M
3300025986|Ga0207658_10971854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria774Open in IMG/M
3300026023|Ga0207677_10878241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense807Open in IMG/M
3300026023|Ga0207677_11956415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium545Open in IMG/M
3300026116|Ga0207674_10172507All Organisms → cellular organisms → Bacteria2116Open in IMG/M
3300026118|Ga0207675_100542581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1161Open in IMG/M
3300027876|Ga0209974_10094895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis1037Open in IMG/M
3300027910|Ga0209583_10295558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria733Open in IMG/M
3300028379|Ga0268266_11241980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.720Open in IMG/M
3300028786|Ga0307517_10183333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1346Open in IMG/M
3300028802|Ga0307503_10105600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1208Open in IMG/M
3300028802|Ga0307503_10568561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium621Open in IMG/M
3300028875|Ga0307289_10179689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium871Open in IMG/M
3300028876|Ga0307286_10293217All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium600Open in IMG/M
3300028885|Ga0307304_10234004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium796Open in IMG/M
3300031152|Ga0307501_10096686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium740Open in IMG/M
3300031184|Ga0307499_10093258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium814Open in IMG/M
3300031548|Ga0307408_101608241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium617Open in IMG/M
3300031716|Ga0310813_12081303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium536Open in IMG/M
3300031731|Ga0307405_12040374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium514Open in IMG/M
3300031939|Ga0308174_11735175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales537Open in IMG/M
3300031995|Ga0307409_101734615All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300032005|Ga0307411_11699301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium584Open in IMG/M
3300032012|Ga0310902_10013425All Organisms → cellular organisms → Bacteria3419Open in IMG/M
3300032205|Ga0307472_100157764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1668Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.71%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.29%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.29%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.86%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.86%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.14%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.14%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.14%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.43%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.43%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.43%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.43%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.43%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.43%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.43%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.43%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.71%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.71%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.71%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.71%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.71%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.71%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.71%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006186Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022889Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4EnvironmentalOpen in IMG/M
3300022910Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6EnvironmentalOpen in IMG/M
3300023275Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5EnvironmentalOpen in IMG/M
3300025227Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in- M7 (SPAdes)Host-AssociatedOpen in IMG/M
3300025297Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1228445913300000550SoilHVVRLRNAAVEATAEQGTGTIDGQKINLQGSWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKSATRSCAGAIKRPFKPFLPRGKK*
JGIcombinedJ13530_10878662013300001213WetlandGSWKRDGRQYEASYSGSFVRRSAWLKGSQTWTDGGKTATRACTGAIKRPLKAFLRRDTR*
C688J35102_11789669913300002568SoilRNAAVEATAEQGTGTIDGQKINLQGTWKSGSRQYEAKYSGSFVRRGAKLKGTQTWTGGGKTAIRACAGAIKRPFKPFLPRDKK*
C688J35102_12019461913300002568SoilRNAAVEATAEQGTGTIDGQKINLQGTWKSGSRQYEAKYSGSFVRRGAKLKGTQTWTGGGKTAIRPCAGAIKRPFKPFLPRDKK*
JGI25405J52794_1014685023300003911Tabebuia Heterophylla RhizosphereKINLQGTWTGGNRQYEAKYSGTFVRRSAKLKGTQTWTDGGKSVIRACSGAIKRPLRPFLPRGKKQAAL*
Ga0066676_1107803413300005186SoilVRLRSLAVEAAAEQGSGAIDGQKIDLQGSWKGGGREYAAKYSGSFVRRSARLKGTQTWTDGGKTVTRACAGAIKRPLKPFLPRNKKQAVAW*
Ga0065707_1027401023300005295Switchgrass RhizosphereEATAEQGTGTIDRQKINLQGSWKSGNRQYEAKYSGSFVRRSARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK*
Ga0070670_10209160123300005331Switchgrass RhizosphereQNIVLQGSWKGGTREYQAKYSGTFVRRSVKLKGAQTWAEGGKTITRACAGAVKRRLKPFLPRKPSAT*
Ga0070682_10010568413300005337Corn RhizosphereVVRLRNAAVEATAEQGTGTIEGQKITLQGGWKSGARQYEANYSGSFVRRSAKLNGTQTWTDGGKTVTRACTGAIKRPLKAFLPRHRK*
Ga0070689_10185630323300005340Switchgrass RhizosphereIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ*
Ga0070669_10023050633300005353Switchgrass RhizosphereWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ*
Ga0070688_10011797933300005365Switchgrass RhizosphereVEEQGTGTLSGQTIDLQGSWKSGSHEYQAKYSGTFVRRSAKLKGTQTWTEGGKTMSRACSGAIKRPLKPFLPRNKQPAAA*
Ga0070667_10115994413300005367Switchgrass RhizosphereHVVRLRNAAVEAAAEQGSGTIDGQNIDLQGTWKSGSREYAAKYSGSFVRRSARLTGTQTWTDGGKTVIRACAGAIKRPLKPFLPRAKKQAAAW*
Ga0070700_10126291323300005441Corn, Switchgrass And Miscanthus RhizosphereEQGAGKVSGQSIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ*
Ga0070663_10008101333300005455Corn RhizosphereVRLRNAAVEAAAEQGTGTIEGQKITLQGGWKSGARQYEANYSGSFVRRSAKLNGTQTWTDGGKTVTRACTGAIKRPLKAFLPRHRK*
Ga0070663_10074980413300005455Corn RhizosphereTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFRPFLPRNKKQAAAW*
Ga0068853_10074577523300005539Corn RhizosphereNAAVEATAEQGTGTIDGQKINLQGSWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTVVRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0070695_10085366423300005545Corn, Switchgrass And Miscanthus RhizosphereKVSGQSIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ*
Ga0070665_10247163013300005548Switchgrass RhizosphereIDGQKIDLQGAWKGGGREYQATYIGSFVRRSARLKGTQTWTDGGKTVTRACAGAIKRPLKPFLPRTQKQAALR*
Ga0066670_1043037523300005560SoilDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0070664_10089915623300005564Corn RhizosphereGVVKGQNIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKPAG*
Ga0068864_10052292813300005618Switchgrass RhizosphereTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0068866_1139643413300005718Miscanthus RhizosphereHVVRLRNAAVEATAEQGTGTIDGQKINLQGSWKSGNRQYEAKYNGSFVRRSARLKGTQTWTDGGKSATRSCAGAIKRPFKPFLPRGKK*
Ga0068851_1053128313300005834Corn RhizosphereQNIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0068851_1064671623300005834Corn RhizosphereGTVDGQKIQLQGTWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0068870_1077922423300005840Miscanthus RhizosphereLRDSAAEPVPEQGAGKVSGQSIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ*
Ga0068863_10199896923300005841Switchgrass RhizosphereIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKPAG*
Ga0075365_1107315213300006038Populus EndosphereSHVVRLGKVAVEKATEQGTGKIDGQKIDLQGGWKGGSRSYDAKYSGSFVRRTAKLKGTQTWTDGGKTVTRACMGAIKRPLRPFLPRKKQT*
Ga0075369_1039329523300006186Populus EndosphereAVEAAAEQGTGTVVGQNIDLQGAWKSGSREYTAKYSGSFVRRSARLKGTQSWTDGGKTVTRACAGAIKRPLKPFLPRAKKQAAAW*
Ga0075370_1027351723300006353Populus EndosphereTVPVPCSAAVEAAAEQGTGTVSGTKIDLQGSWKGGSWQYEAKYSGSFVRRSATLEGTQSWTDGGKTVTRACTGAIKRPFKPFLPRAKKSAQLQ*
Ga0074056_1175711613300006574SoilDGQKIDLQGTWKGGSREYAANYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA*
Ga0074048_1273004213300006581SoilRDRASEVLEKGAGVVKGQNIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKPAG*
Ga0066665_1108514223300006796SoilGTWKGGGREYAAKYSGSFVRRSARLKGTQTWTDGGKTVTRGCAGAIKRPLKPFLPRNKKQAAAW*
Ga0079219_1028852613300006954Agricultural SoilGSWKGGSREYQAKYSGTFVRRSAKLKGTQTWTEGGKTITRVCSGAIKRPLKAFLPRKKPTA*
Ga0079219_1209872213300006954Agricultural SoilQGTGTLNGDNISLQGSWKAGSRQYEAKYSGAFVRRHADLKGTQTWNDGGKTLTRGCSGTIKRPFKVFLPGDKK*
Ga0105106_1070964823300009078Freshwater SedimentGTGVLKGQHISLEGSWSGGGRQYHAAYSGTFVRRSARLKGRQTWTDGGRIVIRACSGAVKRPFRVFLPRKQDAR*
Ga0105245_1028325343300009098Miscanthus RhizosphereTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTITRTCAGAIKRPFKPFLPRNRKQAAAW*
Ga0105245_1099726923300009098Miscanthus RhizosphereRNAAVEATAEQGTGTIDGQKINLQGSWKSGNRQYEAKYSGSFVRRGARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK*
Ga0075418_1299493313300009100Populus RhizosphereGTGTIDGQRINLQGTWKGGSRAYEAKYGGTFVRRSAKLKGTQTWTDGGKTVTRACAGAIKRPLRPFLPRAKKQAAAW*
Ga0066709_10367110423300009137Grasslands SoilIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0114129_1102648613300009147Populus RhizosphereKIDLQGSWKGGSRAYEAKYSGSFVRRSAKLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0105243_1055865013300009148Miscanthus RhizosphereEQGTGTLSGQNIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0105241_1058536623300009174Corn RhizosphereRKLAVEAAAEQGTGTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFRPFLPRNKKQAAAW*
Ga0105242_1163169213300009176Miscanthus RhizosphereLQGTWKGGSRDYAAKYSGSFVRRSARLKGTQTWTDGGKTVVRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0105237_1118075513300009545Corn RhizosphereAVESVAEQGTGTLSGQNIALQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0105237_1271138213300009545Corn RhizosphereHVVRLRNAAVEAAAEQGTGTIEGQKITLQGGWKSGARQYEANYSGSFVRRSAKLNGTQTWTDGGKTVTRACTGAIKRPLKAFLPRHRK*
Ga0105238_1043560213300009551Corn RhizosphereQGTGTLSGQNIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGGKTMSRACSGAIKRPLKPFLPRKKPAVA*
Ga0105238_1044856613300009551Corn RhizosphereLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFRPFLPRNKKQAAAW*
Ga0126313_1188343713300009840Serpentine SoilGLWKSGTREYQAKYSGTFVRRHAKLKGTQTWSEGGKTMTRACSGAIKRPLKPFLPRNKKPAAA*
Ga0126305_1111342923300010036Serpentine SoilWKGGARQYDAKYSGTFVRRSAHLKGTQTWTEGGKTVTRACTGAIKRPLKLFLPRAKKPAAA*
Ga0126304_1054082913300010037Serpentine SoilTIDGQKINLQGSWKSGARQYEAKYSGHFVRRSAKLTGTQNWTDGGKTAIRACAGAIKRPFKPFLPRKK*
Ga0126310_1172259613300010044Serpentine SoilQGSWKSGSRQYEATYSGSFVRRSAKLTGTQTWTDGGKTVTRACVGAIKRPFKPFLPRGKK
Ga0134125_1023617213300010371Terrestrial SoilTWKGGNRTYEAKYNGTFVRRSARLKGTQTWTDGSSTVVRACTGAIKRPLKPFLPREKKQAGAG*
Ga0134125_1129546823300010371Terrestrial SoilDGQKINLQGSWKSGNRQYEAKYSGSFLRRGARLKGTQTWTDGGKSATRSCAGAIKRPFKPFLPRGKK*
Ga0105239_1188426713300010375Corn RhizosphereKINLQGSWKSGNRQYEAKYSGSFVRRSARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK*
Ga0105239_1306234013300010375Corn RhizosphereEQGTGTIDGQKINLQGTSKGGSRQYEAKYSGSFVRRSAKLKGTQTWTDGGKTVTRACTGAIKRPLKAFLPRHRK*
Ga0134127_1020511423300010399Terrestrial SoilVAEQGTGTVDGQKIQLQGTWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0134127_1179784223300010399Terrestrial SoilKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0134121_1103402223300010401Terrestrial SoilYNHVVRLRNAAVEATAEQGTGTIDGQKINLQGTWKSGSRQYEAKYSGSFVRRGAKLKGTQTWTDGGKTAIRACAGAIKRPFKPFLPRDKK*
Ga0134121_1268414023300010401Terrestrial SoilGTGTLSVQNIDLQGSWKGGTREDQAKYSGTFVRRSARLKGTQTWTEAGKTMTRACSGAIKRPLKPFLPRNKKPAAA*
Ga0134123_1181811213300010403Terrestrial SoilRISLEGSWKGDAGQYQASYSGSFVRRSAKLIGTQTWTVNGRIVTRSCTGVIKRPLKAFLPRAKKPAKSE*
Ga0105246_1076537323300011119Miscanthus RhizosphereQNIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKPAG*
Ga0137442_101519923300011414SoilEGNGTVNGQAISLQGSWSGGSRQYKASYSGAFVRRSARLRGAQTWTDGGRTVTRACSGAIKRPLKAFLRRDNKKPVKP*
Ga0137458_102092733300011436SoilSLQGSWNGGNRQYKASYSGVFVRRSARLKGAQTWIDGGRTITRACSGAIKRPFRAFLPRDKKPPADQ*
Ga0137453_109893623300012034SoilEGAGTLDGQNLSLQGSWNGGNRQYKASYSGVFVRRSARLKGAQTWIDGGRTITRACSGAIKRPLRAFLPRDKKPPAGQ*
Ga0137461_121217813300012040SoilVVRLRGPAEGVAELGAGTLNGQAISLQGSWQGGGRQYNATYSGTFVRRSAKLKGTQTWTGGGRQVARACSGVVKRPFKAFLPRPRKKPASP*
Ga0137361_1194857113300012362Vadose Zone SoilLQGTWKSGSRKYESKYSGSFVRRSAKLKGTQTWTDGGKTEIRACAGAIKRPLKPFLPRARKQAAAW*
Ga0157330_105172413300012514SoilQGTGTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA*
Ga0137397_1010578313300012685Vadose Zone SoilKIDLEGTWKGGGREYAAKYSGSFVRRSARLKGTQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0157286_1008250523300012908SoilGVVEGQDIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLRPFLPRNKPAA*
Ga0137413_1176315013300012924Vadose Zone SoilNAAVEAATEQGTGKIDGQNIDLQGTWQSGSREYQAKYSGSFVRRSARLKGTQTWTDGGKTVIRACAGAIKRPLKPFLPRDRKQAALW*
Ga0137419_1144005023300012925Vadose Zone SoilEAVAEQGSGAIDGQKIDLEGTWKGGGREYAAKYSGSFVRRSAKGTQTWTDGGKTVVRACVGAIKRPLKPFLPRDKKQAAAW*
Ga0153915_1112580523300012931Freshwater WetlandsSGGKRQYKAAYSGTFVRRTARLKGSQTWSVDGKTITRACAGAIKRPLKAFLPRQRKPPR*
Ga0164307_1003258813300012987SoilVEAAAEQGTGTIDGQKIDLQGTWKGGSREYAAKYSGSFVRRSARLKGMQSWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA*
Ga0164306_1049143713300012988SoilDLQGAWKGGGREYAAKYSGSFVRRSARLRGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA*
Ga0157373_1080355423300013100Corn RhizosphereMIDGQKINLLGTWKGGNRTYEAKYNGTFVRRSARLKGTQTWTDGSSTVVRACTGAIKRPLKPFLPREKKQAGAG*
Ga0157378_1093341833300013297Miscanthus RhizosphereQKINLQGSWKSGSRQYEATYSGSFVRRSAKLKGTQTWTDGGKTVTRVCAGAIKRPLKAFLPRDKK*
Ga0157378_1255015713300013297Miscanthus RhizosphereGQNISLEGSGSGGGREYKAKYSGTFVRRSARLTGTQTWTEGGKTMARACSGAIKRPLRLFLPRDKKP*
Ga0163162_1010897013300013306Switchgrass RhizosphereIEGQKINLQGSWKSGSRQYEAKYNGSFVRRSARLKGTQTCTDGGKSATRSCAGAITRPFQPFLPRGKK*
Ga0157375_1140367023300013308Miscanthus RhizosphereWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW*
Ga0157380_1023457323300014326Switchgrass RhizosphereAVAEQGTGTVDGQRIDLQGSWKGDSRSYEAKYSGRFVRRSAKLKGTQTWTDGGKTVTRVCAGAIKRPLKAFLPRDKK*
Ga0157380_1042259723300014326Switchgrass RhizosphereRDRASEVLEKGAGVVKGQNIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKHAG*
Ga0157379_1028093813300014968Switchgrass RhizosphereQNIDLQGSWKGGTREYQAKYSGTFVRRSARLKGTQTWTEAGKTMTRACSGAIKRPLKPFLPRNKKPAAA*
Ga0132257_10105456223300015373Arabidopsis RhizosphereVVRLRDVAVESVAEQGTGTLSGQNIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV*
Ga0132257_10356586113300015373Arabidopsis RhizosphereSLAVEAAAEQGTGMIDGQKIDLQGTWKGGSREYEAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFKPFLPRNKKQAAA*
Ga0163161_1049064323300017792Switchgrass RhizosphereATAEQGTGTVNGAKIDLQGSWKDGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK
Ga0190266_1005727633300017965SoilGSWKDAARQYSAQYGGVFVRRGARLKGTQTWTEGGRTLTRQCAGAIKRPLKAFIPRKRM
Ga0184623_1048342323300018056Groundwater SedimentGRSGAGTGKIDGQKMDLQGTWKGGSREYTAKYSGSFVRRSAKLKGTQTWTDGGKTVIRACAGAIKRPLKPFLSRAKKQAAAW
Ga0187773_1008236023300018064Tropical PeatlandVTGQDISLQGSWSGGKRQYKAAYSGTFVRRTARLKGSQTWSVDGKTITRACAGAIKRPLKAFLPRQRKPPR
Ga0184617_123811623300018066Groundwater SedimentGSGKIDGQKIDLQGSWKGGSRTYEAKYSGSFVRRSAKLKGTQTWTDGGKTVTRACAGAIKRPLKPFLPRARKQAAAW
Ga0184629_1031054713300018084Groundwater SedimentNIRLQGSWSGETRQYKADYSGTFVRRTARLKGTQIWTDGGKTIARACSGAVKRPLKVFLPRDRM
Ga0187774_1128068113300018089Tropical PeatlandVVRLKSVAAEAVAEQGDGTVVGQKISLQGSWSGGGREYKAAYSGTFVRRTARLKGSQTWSVDGKTITRACAGAIKRPLKAFLPRQRKPPR
Ga0190275_1282222823300018432SoilNAAVEATAEQGTGKIDGQKIDLQGTWKSGSREYQAKYSGSFVRRSANLKGTQTWTDGGKTVTRACAGAIKRPLKPFLPRDKKQGAAK
Ga0066669_1214819213300018482Grasslands SoilAATTMLQWKGSGRANAAKYSGSFVRRSARLNGTQIWTDGGKTVIRACAGAIKRPFKPFLPRNKNQAAAW
Ga0173479_1044736723300019362SoilVRLRDSAAEPVPEQGAGKVSGQSIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ
Ga0210380_1005829613300021082Groundwater SedimentTHVVRLKAAATEAVAEQGYGSVVGDNIRLQGSWSGETRQYKADYSGTFVRRTARLKGTQIWTDGGKTIARACSGAVKRPLKVFLPRDRK
Ga0210377_1069610723300021090Groundwater SedimentGSWNGGNRQYKASYSGVFVRRSARLKGAQTWIDGGRTITRACSGAIKRPLRAFLPRERKTPAGQ
Ga0222622_1118885823300022756Groundwater SedimentQGTGTIDGQKINLQGSWKSGARQYEAKYSGSFVRRSAKLTGTQTWTDGGKTAIRACAGAIKRPFKPFLPRGRK
Ga0247785_102998713300022889SoilVEERGTGTLSGQNIDLQGSWKGGTREYQAKYSGTFVRRSARLKGTQTWTEAGKTMTRACSGAIKRPLKPFLPRNKKPAAA
Ga0247768_113655623300022910Plant LitterVRLRNAAVEAAAEQGTGTIEGQKITLQGGWKSGARQYEANYSGSFVRRSAKLNGTQTWTDGGKTVTRACTGAIKRPLKAFLPRHRK
Ga0247776_1037164213300023275Plant LitterWKSGSRSYEAKYSGSFVRRSANIKGTQTWTDGGKTIVRACAGAIKRPLKPFLPGQKKAAVEHGSQPAAS
Ga0207638_100331313300025227Corn, Switchgrass And Miscanthus RhizosphereSEQGKGSLNGQDIELQGSWKAGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKSFTRACTGTIKRPFRVFLPGEKK
Ga0209758_115961223300025297Arabidopsis RhizosphereGGSREYAAKYSGSFVRRSARLKGTQTWTDGGTTVVRACAGAIKRPFKPFLPRNKKQAAAW
Ga0207656_1024556913300025321Corn RhizosphereQKIQLQGTWKGGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW
Ga0207642_1015727523300025899Miscanthus RhizosphereGTWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW
Ga0207705_1089054023300025909Corn RhizosphereVVRLRNLAVEAAAEQGTGTIDGQKIDLQGTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTVTRACAGAIKRPFRPFLPRNKKQAAAW
Ga0207654_1121920123300025911Corn RhizosphereSWKGGTREYQAKYSGTFVRRSARLKGTQTWTEAGKTMTRACSGAIKRPLKPFLPRNKKPAAA
Ga0207681_1053581523300025923Switchgrass RhizosphereAGKVSGQSIELEGSWKGKGREYQAKYSGTFVRRSAHLKGTQSWTDGGTTATRNCTGAIKRPLKAFLPRKPKPPAAQ
Ga0207644_1122777413300025931Switchgrass RhizosphereVLEKGAGVVKGQDIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKLPLKPFLPRNKPAG
Ga0207706_1058572723300025933Corn RhizosphereNAAVEATGEQGTGTIDGQKINLQGTWKSGSRQYEAKYSGSFVRRSAKLKGTQTWTDGGKTVTRVCAGAIKRPLKAFLPRDKK
Ga0207706_1062274213300025933Corn RhizosphereKSGNRQYEAKYSGSFVRRSARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK
Ga0207686_1119353323300025934Miscanthus RhizosphereVRLRDRASEVLEKGAGVVKGQNIDLQGSWKDDTRQYEAKYSGTFVRRSAQLKGTQSWTDGGKTVTRACSGAIKRPLKPFLPRNKPAG
Ga0207709_1017243813300025935Miscanthus RhizosphereEQGTGTLSGQNIDLQGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV
Ga0207704_1110834223300025938Miscanthus RhizosphereGTIDGQKIDLQGSWKSGNRQYEAKYSGSFVRRGARLKGTQTWTDGGKTATRSCAGAIKRPFKPFLPRGKK
Ga0207667_1103162713300025949Corn RhizosphereHAPEQGVEQGTGTVSGQDIQLKGSWKGKSREYQASYSGTFVRRSAKLKGTQTWTEGGKTITRSCTGVIKRPFKVFLPRAKKPPNA
Ga0207640_1181140813300025981Corn RhizosphereTWKGGSRDYAAKYSGSFVRRSARLKGTQTWTDGGKTVVRACAGAIKRPFKPFLPRNKKQAAAR
Ga0207658_1097185413300025986Switchgrass RhizosphereGSWKGGAREYQAKYSGTFVRRSAKLKGTQTWTEGAKTISRACSGAIKRPLKPFLPRNKPAAV
Ga0207677_1087824113300026023Miscanthus RhizosphereAEQGIGTVDGQKIQLQGTWKSGSRQYEAKYSGSFVRRSARLKGTQTWTDGGKTEIRACAGAIKRPFKPFLPRNKKQAAAW
Ga0207677_1195641513300026023Miscanthus RhizosphereISLEGSGSGGGREYKAKYSGTFVRRSARLTGTQTWTEGGKTIARACSGAIKRPLRLFLPRDKKP
Ga0207674_1017250713300026116Corn RhizosphereDGQKIDLQGGWKIGSRSYEAKYSGSFVRRSALLKGTQTWTDGGKTVIRACAGAIKRPLKPFLPRDKKQAALW
Ga0207675_10054258133300026118Switchgrass RhizosphereRYNHVVRLRNAAVEATTEQDTGTIDGQKINLKGSWKSGSRQYEATYSGSFVRRSARLKGTQTWTDGGKTATRACAGAIKRPFKPFLPRDKK
Ga0209974_1009489513300027876Arabidopsis Thaliana RhizosphereNGQDIELQGSWKSGNRQYEAKYSGAFVRRHADLKGTQTWTDGGKTFTRACTGTIKRPFRVFLPGEKK
Ga0209583_1029555833300027910WatershedsVAEQGTGTLSGQNIDLQGSWKGGAGEYQAKYSGTFVRRSAKLKGAQTWIEGGKTTSRACSGAIKRPLKPFLPRDKKPAAV
Ga0268266_1124198023300028379Switchgrass RhizosphereKIDGQKIDLQGAWKGGGREYQATYIGSFVRRSARLKGTQTWTDGGKTVTRACAGAIKRPLKPFLPRTQKQAALR
Ga0307517_1018333313300028786EctomycorrhizaTWKGGGREYAAKYSGSFVRRSARLKGMQTWTDGGKTITRTCAGAIKRPFKPFLPRNRKQAAAW
Ga0307503_1010560013300028802SoilAPEPALEQGSGTVDGQKVDLQGSWKGGARQYDAKYSGTFVRRSAHLKGTQTWTEGGKTVTRACTGAIKRPLKLFLPRAKKPAAA
Ga0307503_1056856123300028802SoilQKINLQGTWKSGGRQYEAKYSGSFVRRGAKLKGTQTWTDGGKTATRACAGAIKRPFKPFLPRDRK
Ga0307289_1017968923300028875SoilGTGTIDGQKINLQGTWKSGNRQYEAKYSGSFVRRSAKLKGTQTWTDGGNTATRACAGAIKRPLKPFLPRDKK
Ga0307286_1029321723300028876SoilNHVMRLRNAAVEATAEQGTGTIDGQKINLQGTWKSGNRQYEAKYSGSFVRRSAKLKGTQTWTDGGKTATRACAGAIKRPLKPFLPRDKK
Ga0307304_1023400423300028885SoilEQGTGTIDGQKIQLQGTWKSGSRQYEAKYSGSFVRRSAKLKGTQTWTDGGKTATRACAGAIKRPLKPFLPRDKK
Ga0307501_1009668623300031152SoilINLQGTWKSGGRQYEAKYSGSFVRRGAKLKGTQTWTDGGKTATRACAGAIKRPFKPFLPRDRK
Ga0307499_1009325813300031184SoilNAAVEATAEQGTGTIDGQKINLQGTWKSGGRQYEAKYSGSFVRRGAKLKGTQTWTDGGKTATRACAGAIKRPFKPFLPRDRK
Ga0307408_10160824123300031548RhizosphereMRSNQRNAAVEATAEQGTGTISGQKIEIQGNWKSGSRQYDAKYSGSFVRRSARLKGTQTWTDGGKTVTRACTAAIKRPFKPFLPRGKKQG
Ga0310813_1208130313300031716SoilHVVRLSKVDVEATTEQGTGTIDGQKISLQGGWKGGNRSYEAKYSGSFVRRSATIKGTQTWTDGGKTITRACTGAIKRPLKPFLPRAKKQAAG
Ga0307405_1204037413300031731RhizosphereGSLRGTRIELQGSWKDATRQYSAQYGGVFVRRSARLKGTQTWTEGGRSLTRQCAGAIKRPLRAFIPRKRM
Ga0308174_1173517513300031939SoilTIEGQKITLQGSWKSGGRQYEATYSGSFVRRSAKLKGTQTWTDGGKTFTRACTGAIKRPLKAFLPRHRK
Ga0307409_10173461513300031995RhizosphereNLQGSWKSGGRQYEAKYSGHFVRRSAKLTGTQAWTDGGKTVTRACAGAIKRPLKAFLPRDKK
Ga0307411_1169930123300032005RhizosphereLQGSWKGGTRQYEARYGGVFVRRSARLKGTQTWTEGGRTVTRHCAGAIKRPLRAFLPRKR
Ga0310902_1001342543300032012SoilVESVEERGTGTLSGQNIDLQGSWKGGTREYQAKYSGTFVRRSARLKGTQTWTEAGKTMTRACSGAIKRPLKPFLPRNKKPAAA
Ga0307472_10015776443300032205Hardwood Forest SoilINLQGGWKGDNRKYEAKYSGTFVRRSAKLKGTQTWTDGGKTVIRACTGAIKRPLKPFLPREKKQAAAW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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