Metagenome / Metatranscriptome Family F054244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	67 residues
Representative Sequence	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTVAPSSTAG
Number of Associated Samples	112
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.71 %
% of genes near scaffold ends (potentially truncated)	29.29 %
% of genes from short scaffolds (< 2000 bps)	85.00 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.571 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.83% β-sheet: 20.21% Coil/Unstructured: 65.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00196	GerE	46.43
PF00583	Acetyltransf_1	2.86
PF01183	Glyco_hydro_25	2.14
PF13191	AAA_16	0.71
PF03795	YCII	0.71
PF03551	PadR	0.71
PF08327	AHSA1	0.71
PF14417	MEDS	0.71
PF01513	NAD_kinase	0.71
PF01636	APH	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	2.14
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.71
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.71
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.71
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.86 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.14 %
Unclassified	root	N/A	37.14 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.43 %
Unclassified	root	N/A	37.14 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	60.00 %
Unclassified	root	N/A	37.14 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.71 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	10.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.29 %
Cryptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales	3.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.14 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	10.00 %
Cryptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae	3.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.14 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.43 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.43 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.71 %
Tsukamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	7.86 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	3.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.14 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	1.43 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.43 %
Allokutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Allokutzneria	0.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.71 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.71 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.71 %
Tsukamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Actinophytocola oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	7.86 %
Cryptosporangium arvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	3.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.14 %
Herbidospora galbida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	1.43 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.43 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.71 %
Streptomyces cocklensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cocklensis	0.71 %
Allokutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Allokutzneria	0.71 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.71 %
Tsukamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.14 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Actinophytocola oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	7.86 %
Cryptosporangium arvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	3.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.14 %
Herbidospora galbida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	1.43 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.43 %
Pseudonocardia sp. TRM90224	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	0.71 %
Streptomyces cocklensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cocklensis	0.71 %
Allokutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Allokutzneria	0.71 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.71 %
Tsukamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10056674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300004633\|Ga0066395_10486754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300005166\|Ga0066674_10497091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300005332\|Ga0066388_101329088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300005332\|Ga0066388_103242055	Not Available	831	Open in IMG/M
3300005363\|Ga0008090_15233979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	973	Open in IMG/M
3300005434\|Ga0070709_10026500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3436	Open in IMG/M
3300005435\|Ga0070714_100021771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	5248	Open in IMG/M
3300005435\|Ga0070714_100194482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1853	Open in IMG/M
3300005435\|Ga0070714_100321795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1446	Open in IMG/M
3300005436\|Ga0070713_102485230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300005439\|Ga0070711_102080725	Not Available	500	Open in IMG/M
3300005518\|Ga0070699_100434910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	1189	Open in IMG/M
3300005533\|Ga0070734_10434966	Not Available	748	Open in IMG/M
3300005537\|Ga0070730_10027895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4292	Open in IMG/M
3300005541\|Ga0070733_10072543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2171	Open in IMG/M
3300005713\|Ga0066905_100027348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3170	Open in IMG/M
3300005764\|Ga0066903_104591321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300005764\|Ga0066903_105691503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300005764\|Ga0066903_106173721	Not Available	626	Open in IMG/M
3300005921\|Ga0070766_10129207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1527	Open in IMG/M
3300006059\|Ga0075017_100887538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300006174\|Ga0075014_100550493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300006175\|Ga0070712_100304581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1291	Open in IMG/M
3300006755\|Ga0079222_11642671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300006796\|Ga0066665_11148890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	592	Open in IMG/M
3300006800\|Ga0066660_11597356	Not Available	516	Open in IMG/M
3300006804\|Ga0079221_10292981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	950	Open in IMG/M
3300006804\|Ga0079221_11814079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	500	Open in IMG/M
3300006806\|Ga0079220_10395019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	900	Open in IMG/M
3300006854\|Ga0075425_100690942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172	Open in IMG/M
3300006954\|Ga0079219_11875741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300009038\|Ga0099829_10281031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1362	Open in IMG/M
3300009038\|Ga0099829_11016141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300009089\|Ga0099828_10065470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3062	Open in IMG/M
3300009090\|Ga0099827_10411860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300009792\|Ga0126374_10983018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300010043\|Ga0126380_11967826	Not Available	534	Open in IMG/M
3300010046\|Ga0126384_10010213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5827	Open in IMG/M
3300010048\|Ga0126373_12080467	Not Available	630	Open in IMG/M
3300010152\|Ga0126318_10148056	Not Available	738	Open in IMG/M
3300010159\|Ga0099796_10136306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	956	Open in IMG/M
3300010360\|Ga0126372_11585840	Not Available	693	Open in IMG/M
3300010361\|Ga0126378_11042234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300010361\|Ga0126378_12009565	Not Available	659	Open in IMG/M
3300010366\|Ga0126379_10111624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2459	Open in IMG/M
3300010366\|Ga0126379_10749713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1073	Open in IMG/M
3300010366\|Ga0126379_11233137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300010366\|Ga0126379_12809000	Not Available	582	Open in IMG/M
3300010376\|Ga0126381_102243160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Allokutzneria	785	Open in IMG/M
3300010398\|Ga0126383_10155724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2138	Open in IMG/M
3300010398\|Ga0126383_10178370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	2016	Open in IMG/M
3300010937\|Ga0137776_1382459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3749	Open in IMG/M
3300010937\|Ga0137776_1515773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4671	Open in IMG/M
3300011120\|Ga0150983_10337985	Not Available	530	Open in IMG/M
3300011120\|Ga0150983_15805568	Not Available	526	Open in IMG/M
3300012096\|Ga0137389_11073140	Not Available	690	Open in IMG/M
3300012201\|Ga0137365_10002168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15528	Open in IMG/M
3300012210\|Ga0137378_10311051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	1465	Open in IMG/M
3300012357\|Ga0137384_10150099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	1950	Open in IMG/M
3300012971\|Ga0126369_11066212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300012975\|Ga0134110_10259868	Not Available	741	Open in IMG/M
3300014157\|Ga0134078_10619357	Not Available	521	Open in IMG/M
3300016270\|Ga0182036_10309025	Not Available	1205	Open in IMG/M
3300016387\|Ga0182040_11617816	Not Available	552	Open in IMG/M
3300016404\|Ga0182037_11603763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	579	Open in IMG/M
3300016422\|Ga0182039_10404452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300016445\|Ga0182038_11108526	Not Available	704	Open in IMG/M
3300018431\|Ga0066655_10286521	Not Available	1068	Open in IMG/M
3300018433\|Ga0066667_11872804	Not Available	546	Open in IMG/M
3300020199\|Ga0179592_10131677	Not Available	1147	Open in IMG/M
3300021171\|Ga0210405_10112350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	2151	Open in IMG/M
3300021171\|Ga0210405_10462018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300021180\|Ga0210396_10501289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300021377\|Ga0213874_10396520	Not Available	536	Open in IMG/M
3300021401\|Ga0210393_10292995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	1322	Open in IMG/M
3300021407\|Ga0210383_11014751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300021420\|Ga0210394_10437738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	1151	Open in IMG/M
3300021477\|Ga0210398_11010016	Not Available	663	Open in IMG/M
3300021478\|Ga0210402_10453252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300021478\|Ga0210402_11349020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	640	Open in IMG/M
3300021478\|Ga0210402_11881521	Not Available	524	Open in IMG/M
3300021559\|Ga0210409_10141474	Not Available	2207	Open in IMG/M
3300021560\|Ga0126371_10291120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1757	Open in IMG/M
3300021560\|Ga0126371_10632566	Not Available	1219	Open in IMG/M
3300021560\|Ga0126371_11331818	Not Available	851	Open in IMG/M
3300021560\|Ga0126371_12210480	Not Available	664	Open in IMG/M
3300021855\|Ga0213854_1211585	Not Available	586	Open in IMG/M
3300022499\|Ga0242641_1040533	Not Available	539	Open in IMG/M
3300022513\|Ga0242667_1020156	Not Available	693	Open in IMG/M
3300022513\|Ga0242667_1040623	Not Available	564	Open in IMG/M
3300022533\|Ga0242662_10235552	Not Available	589	Open in IMG/M
3300022713\|Ga0242677_1025603	Not Available	759	Open in IMG/M
3300022724\|Ga0242665_10203784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300025898\|Ga0207692_10947907	Not Available	567	Open in IMG/M
3300025915\|Ga0207693_10043192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	3547	Open in IMG/M
3300025916\|Ga0207663_11426746	Not Available	558	Open in IMG/M
3300025928\|Ga0207700_10013680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	5290	Open in IMG/M
3300025928\|Ga0207700_10035277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	3601	Open in IMG/M
3300025929\|Ga0207664_10065612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2907	Open in IMG/M
3300027826\|Ga0209060_10419047	Not Available	609	Open in IMG/M
3300027862\|Ga0209701_10452455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300031057\|Ga0170834_101022909	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031474\|Ga0170818_110204882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300031543\|Ga0318516_10015522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3788	Open in IMG/M
3300031543\|Ga0318516_10205627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	1137	Open in IMG/M
3300031543\|Ga0318516_10415981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300031544\|Ga0318534_10431325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cocklensis	756	Open in IMG/M
3300031545\|Ga0318541_10098312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1569	Open in IMG/M
3300031546\|Ga0318538_10679773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300031573\|Ga0310915_10163666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1544	Open in IMG/M
3300031640\|Ga0318555_10304632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300031668\|Ga0318542_10281872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300031720\|Ga0307469_10650096	Not Available	950	Open in IMG/M
3300031751\|Ga0318494_10563100	Not Available	666	Open in IMG/M
3300031763\|Ga0318537_10332254	Not Available	562	Open in IMG/M
3300031765\|Ga0318554_10100771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1623	Open in IMG/M
3300031779\|Ga0318566_10349292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300031782\|Ga0318552_10598272	Not Available	563	Open in IMG/M
3300031799\|Ga0318565_10105850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300031832\|Ga0318499_10069554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300031890\|Ga0306925_11086029	Not Available	810	Open in IMG/M
3300031896\|Ga0318551_10082008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1690	Open in IMG/M
3300031896\|Ga0318551_10592960	Not Available	639	Open in IMG/M
3300031912\|Ga0306921_10413389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → Actinophytocola oryzae	1574	Open in IMG/M
3300031941\|Ga0310912_11041526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	627	Open in IMG/M
3300031942\|Ga0310916_10663117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	884	Open in IMG/M
3300031954\|Ga0306926_11772070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300032008\|Ga0318562_10118074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1515	Open in IMG/M
3300032008\|Ga0318562_10315282	Not Available	909	Open in IMG/M
3300032009\|Ga0318563_10319156	Not Available	841	Open in IMG/M
3300032025\|Ga0318507_10336779	Not Available	657	Open in IMG/M
3300032043\|Ga0318556_10449772	Not Available	674	Open in IMG/M
3300032043\|Ga0318556_10714113	Not Available	521	Open in IMG/M
3300032054\|Ga0318570_10145295	Not Available	1059	Open in IMG/M
3300032065\|Ga0318513_10117611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300032065\|Ga0318513_10647793	Not Available	517	Open in IMG/M
3300032160\|Ga0311301_12058970	Not Available	663	Open in IMG/M
3300032805\|Ga0335078_10021966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9496	Open in IMG/M
3300033289\|Ga0310914_11507456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.57%
Host-Associated	Host-Associated	1.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Aquatic	Environmental → Aquatic	4.29%
Plants	Host-Associated → Plants	1.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Freshwater	Environmental → Aquatic → Freshwater	1.43%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.43%
Sediment	Environmental → Aquatic → Sediment	1.43%
Roots	Host-Associated → Plants → Roots	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.71%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.14%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.71%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100566742	3300004267	Tropical Forest Soil	LRIVLDVRQTADGRLAGDLRMAGSRVTRPFEGIIELVGLIEVFLANPPPASGISGVEAVNPGGPAS*
Ga0066395_104867542	3300004633	Tropical Forest Soil	LRIVLDVWQTADGRLAGDLRMAGSRVTRPFEGIIELVGLIEVFLANPPPASGISGVEAVNPGGPAS*
Ga0066674_104970911	3300005166	Soil	LRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAGADTVSPGSAAG*
Ga0066388_1013290882	3300005332	Tropical Forest Soil	LRIVVDVRQTADGRLVGDLRMAGSRASRPFEGIIELVGLIEVFLASPPSASGISGVETINPGSPAS*
Ga0066388_1032420552	3300005332	Tropical Forest Soil	MWARPTLNRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRSFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG*
Ga0008090_152339792	3300005363	Tropical Rainforest Soil	LRIVLDVRQTAEGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLAGPPAAPGISGADAVNPHSPAG*
Ga0070709_100265002	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVRQTADGRLAGDLRMPGTRATRPFEGIIELVGLIEVFLANPPAPGMAGADTVNTGSTAG*
Ga0070714_1000217712	3300005435	Agricultural Soil	LHIVLDVQQTADGRLAGDIRVAGSRATRPFEGIIELVGLIEIFLANPPSGPGITGAETVTQTSTAG*
Ga0070714_1001944821	3300005435	Agricultural Soil	LRIVLDVQQTAEGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTIAPSGTAG*
Ga0070714_1003217952	3300005435	Agricultural Soil	LRIVLDVRQTADGRLAGDLRMPGTRATRPFEGIIELVGLIEVFLANPPAPGMAGADAINTGSTAG*
Ga0070713_1024852302	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGVIEAFLANPPSGPGITGAETVTQTSTAG*
Ga0070711_1020807251	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AGMSALPTINRRLARRPQLGGARGLHIVLDVQQTADGRLAGDIRVAGSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTIAPSGTAG*
Ga0070699_1004349101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVQQTAEGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPRIAGADAITPGGTSG*
Ga0070734_104349661	3300005533	Surface Soil	LQIVLDVRQTPDGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPASGTVGADPINTGTHAG*
Ga0070730_100278952	3300005537	Surface Soil	LRIVLDVRQTADGRLAGDLRIAGSRATRPFEGIIELVGLIEVFLANPHAPAGIAGADIVKSIPSQP*
Ga0070733_100725432	3300005541	Surface Soil	LRIVLDVRQATDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG*
Ga0066905_1000273484	3300005713	Tropical Forest Soil	LRIVLDVRQTADGRLAGDLRMAGSRVTRPFEGIIELVGLIEVFLANPPPASGISGVEAVNPGGPAT*
Ga0066903_1045913212	3300005764	Tropical Forest Soil	LHIFLDVRQTADGRLVGDLRMAGSRASRPFEGIIELVGLIEVFLANPPPAPGISGVDAINPGGPAGQP*
Ga0066903_1056915031	3300005764	Tropical Forest Soil	LHIVLDVRQTADGRLAGDVRMAGSRAIRSFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG*
Ga0066903_1061737211	3300005764	Tropical Forest Soil	GRLAGDLRMAGTRATRPFEGVIELVGLIEVFLANPPSAPGIAGADTVNPASTAG*
Ga0070766_101292072	3300005921	Soil	LRIVLDVQQTADGRLAGDIRMADTRATRPFEGIIELVGLIEVFLANPPSVPGITGTDTLNPSSTAG*
Ga0075017_1008875382	3300006059	Watersheds	LRIVLDVRQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSAPIMAGANTVNPGSAAG*
Ga0075014_1005504932	3300006174	Watersheds	LRIVLDVQQTADGRLAGDLRVADSRATRPFEGIIELVGIIEVFLANPPSAPGMVAAEIVTPGSTAG*
Ga0070712_1003045812	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSTSTVG*
Ga0079222_116426711	3300006755	Agricultural Soil	LRIVLDVQQTAEGRLAGDLRMAGTRATRPFEGIIELVGLVEVFLANPPSAPGIAGADTIAPSGTAG*
Ga0066665_111488902	3300006796	Soil	LRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAAADTVTPSGTAG*
Ga0066660_115973561	3300006800	Soil	LGGARVLRIVLDVQQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPQAPAGISSADTVNPYSPAG*
Ga0079221_102929811	3300006804	Agricultural Soil	LRIVLDVRQTADGRLAGDVRMAGTCATRPYDGIIELVGLIEVFRAIPPPAPGIAGADTVTPSSTAG*
Ga0079221_118140791	3300006804	Agricultural Soil	LRIVLDVQQSADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSVPRIAGADAINTSSTAG*
Ga0079220_103950191	3300006806	Agricultural Soil	LRIVLDVRQTADGRLAGDVRMAGTRATRPFEGIIELVGLIEVFLANPPAPGIAGTDTITPSSTAG*
Ga0075425_1006909422	3300006854	Populus Rhizosphere	LRIVLDVRQTADGRLAGDVQMAGSRATRPFEGIIELVGVIEAFLANPPSGPGIAGADTITQTSTAG*
Ga0079219_118757412	3300006954	Agricultural Soil	LRIVLDVRQTADGRLAGDVQMAGSRATRPFEGIIELVGVIEAFLASPPSASGIAGADTVTQTRTAG*
Ga0099829_102810312	3300009038	Vadose Zone Soil	LRIVLDVRQTAEGGLAGDLRMAGSRASRPFEGIIELVGLIEVFLANPPSPPGISGADTVIPGSPAS*
Ga0099829_110161411	3300009038	Vadose Zone Soil	LRIVLDVQQNADGHLAGDVRLADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSSSTVG*
Ga0099828_100654702	3300009089	Vadose Zone Soil	LRIVLDVRQTAEGGLAGDLRMAGSRASRPFEGIIELVGLIEVFLANPPSPPGVSGADTVIPGSPAS*
Ga0099827_104118602	3300009090	Vadose Zone Soil	LRIVLDVRQTADGRLAGDLRMAGSRASRPFEGIIELVGLIEVFLANPQAPAGISSADTVNPHSPAG*
Ga0126374_109830181	3300009792	Tropical Forest Soil	LHIVLDVRQTADGRLAGDVRIAGSRATRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG*
Ga0126380_119678262	3300010043	Tropical Forest Soil	LRIVLDVQQTADGRLAGDLRMAGTRATRPFEGVIELVGLIEVFLANPPSGPGIAAADTVTPSSAAG*
Ga0126384_100102132	3300010046	Tropical Forest Soil	LRIVVDVRQTADGRLVGDLRMAGSRASRPFEGIIELVGLIEVLLASPPSAPEISAAETISPGS*
Ga0126373_120804672	3300010048	Tropical Forest Soil	LHIVLDVRQTADGRLAGDVRIAGSRATRPFEGIIELVGVIEGFLANPPSAPGIAGADAITPSTTAG*
Ga0126318_101480562	3300010152	Soil	QLGGARGLRIVLDVRQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLASPPSVPGIAGAESVTPGSTAG*
Ga0099796_101363061	3300010159	Vadose Zone Soil	LRIVLDVQQAADGRLAGDVRPAGSRATRPFEGIIELVGLIEVFLADPPSVPGITGADTLNPSSTAG*
Ga0126372_115858401	3300010360	Tropical Forest Soil	LRIVLDVRQTADGRLAGDVRMAGSRATRPFEGIIELVGVIEAFLASPPSAPVIAGADAPRSTAG*
Ga0126378_110422342	3300010361	Tropical Forest Soil	LRIVLDVRQTADGRLAGDLRMAGTRAARPFEGIIELVGVIEAFLASPPSAPVIAGADAPRSTAG*
Ga0126378_120095651	3300010361	Tropical Forest Soil	LRIVLDVRQTADGRLAGDVRMAGSRATRPFEGIIELVGVIEAFLANPPSAPGIVGADTITQSSTAG
Ga0126379_101116242	3300010366	Tropical Forest Soil	LRIVLDVRQTADGRLAGDVRMAGSRATRPFEGIIELVGVIEAFLANPPSAPGIVGADTITQSSTAG*
Ga0126379_107497131	3300010366	Tropical Forest Soil	LARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADAITPSTTAG*
Ga0126379_112331372	3300010366	Tropical Forest Soil	VQQTAEGRLAGDVRMAGARASRPFEGILELVGLIEVFLANPAAAAGISGGEAINPGSPGS
Ga0126379_128090001	3300010366	Tropical Forest Soil	LRIVLDVQQTADGRLAGDLRMAGTRATRPFEGVIELVGLIEVFLANPPSAPGIAGADTVNPASTAG*
Ga0126381_1022431602	3300010376	Tropical Forest Soil	LHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADAITPSSTAG*
Ga0126383_101557243	3300010398	Tropical Forest Soil	CGRALRLTEGLARRPQLGGARGLHIVLDVRQTADGRLAGDVRIAGSRATRPFEGIIELVGVIEGFLANPPSAPGIAGADAITPSTTAG*
Ga0126383_101783702	3300010398	Tropical Forest Soil	LRIVLDVQQTADGRLAGDLRMAGTRATRPFEGVIELVGLIEVFLANPPSAPGRSGVETITPGSPAG*
Ga0137776_13824592	3300010937	Sediment	LQIVLDVRQTPDGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPASGTGVGDPINTGTHAG*
Ga0137776_15157736	3300010937	Sediment	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTINTGSTVG*
Ga0150983_103379851	3300011120	Forest Soil	LRIVLDVRQAADGRLAGDLRLAGSRATRPFEGIIELVGLIEVFLASPPSAPGMAGADTMNQSSSAG*
Ga0150983_158055681	3300011120	Forest Soil	VRQAADGRLAGDLWLAGSRATRPFEGIIELVGLIEVFLASPPSAPVIASADTINPGSPAG
Ga0137389_110731402	3300012096	Vadose Zone Soil	LRIVLDVQQAADGRLAGDVRPAGSRATRPFEGIIELVGLIEVSLADPPSVPGIAGADTHTPSSTAE*
Ga0137365_100021689	3300012201	Vadose Zone Soil	LRIVLDVRQTADGRLAGDLRMAGSRASRPFEGIIELVGLIEVFLASPPSPTGIASVGTMNPHSQSGVNIHPV*
Ga0137378_103110512	3300012210	Vadose Zone Soil	LRIVLDVRQTADGRLAGDLRMAGSRATSPFEGIIELVGLIEVFLADPSAVSGITGADTVNPSSTAG*
Ga0137384_101500992	3300012357	Vadose Zone Soil	LRIVLDVQQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSSSTVG*
Ga0126369_110662122	3300012971	Tropical Forest Soil	LHIVLDVRQTADGRLAGDVRIAGSRATRPFEGIIELVGVIEGFLANPPSAPGIAGAEVITPSTTAG*
Ga0134110_102598682	3300012975	Grasslands Soil	QLGGARGLRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAGADTVSPGSAAG*
Ga0134078_106193572	3300014157	Grasslands Soil	ARGLRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAGADTVSPGSAAG*
Ga0182036_103090251	3300016270	Soil	LHIVLDVRQTADRRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0182040_116178161	3300016387	Soil	PQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0182037_116037632	3300016404	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSPGMAGADTITPSSTAG
Ga0182039_104044522	3300016422	Soil	VLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0182038_111085262	3300016445	Soil	LRIVLDVRQTAEGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSAPGIAAADTVTPSSTAG
Ga0066655_102865211	3300018431	Grasslands Soil	LRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAGADTVSPGSAAG
Ga0066667_118728041	3300018433	Grasslands Soil	TIDPWSARRPQLGGARGLRIVLDVQQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSGPGIAGADTVSPGSAAG
Ga0179592_101316772	3300020199	Vadose Zone Soil	LRIVLDVQQAADGRLAGDVRPAGSRATRPFEGIIELVGLIEVFLADPPSVPGITGADTLNPSSTAG
Ga0210405_101123502	3300021171	Soil	LRIVLDVRQATDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG
Ga0210405_104620181	3300021171	Soil	TDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG
Ga0210396_105012892	3300021180	Soil	RQATDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG
Ga0213874_103965202	3300021377	Plant Roots	TAEGRLAGDLRMAGTRATRPFEGIIELVGLIEVLLASPPAPGIAGSDAVNTGSSTG
Ga0210393_102929951	3300021401	Soil	LRIVLDVQQTADGRLAGDIRMADTRATRPFEGIIELVGLIEVFLANPPSVPGITGTDTLNPSSTAG
Ga0210383_110147511	3300021407	Soil	LRIVLDVRQTTDGRLAGDLRMADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG
Ga0210394_104377382	3300021420	Soil	LRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAG
Ga0210398_110100161	3300021477	Soil	LRIVLDVRQTTDGRLAGDLRMADSRATRPFEGIIELVGLIEVFLANPPSAPGMAGADTMNTSSTAG
Ga0210402_104532522	3300021478	Soil	LRIVLDVRQTADGCLAGDLRMADSRATRPFEGIIELVGLIEVFLANPPSAPAITGADTISPGNAAG
Ga0210402_113490201	3300021478	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPAPGVAGADAITSSTTAG
Ga0210402_118815211	3300021478	Soil	LRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSSSTVG
Ga0210409_101414741	3300021559	Soil	LRIVLDVQQTADGRLAGDIRMADTRATRPFEGIIELVGLIEVFLANPPSAPGMAGVDTINPGSPAL
Ga0126371_102911203	3300021560	Tropical Forest Soil	LHIVLDVQQTADGRLAGDIRMAGSRATRPFEGIIELVGVIEAFLANPPSSPGITGAEAVTQSTITG
Ga0126371_106325662	3300021560	Tropical Forest Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAAADTVNPASTAG
Ga0126371_113318182	3300021560	Tropical Forest Soil	LRIVLDVQQNADGRLAGDLRMAGSRASSPFEGIIELVGLIEVFLANSPSAPRISGVDVISPGSVGS
Ga0126371_122104802	3300021560	Tropical Forest Soil	EGLARRPQLGGARGLHIVLDVRQTADGRLAGDVRIAGSRATRPFEGIIELVGVIEGFLANPPSAPGIAGADAITPSTTAG
Ga0213854_12115851	3300021855	Watersheds	LRIVLDVQQSADGRLAGDLRIADSRAARSFEGIIELVGLIEVFLANPQCAPGIAGADAVAPSTAAG
Ga0242641_10405332	3300022499	Soil	RGSAGEATTSGIERVLRIVLDVRQATDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPGIAGADAMNTSSTAG
Ga0242667_10201562	3300022513	Soil	IVLDVRQTTDGRLAGDLRMADSRATRPFEGIIELVGLIEVFLANPPSAPVIAGADTMNTSSTAG
Ga0242667_10406231	3300022513	Soil	LLIVLDVRQTADGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPASAPGISGADTMNTTSTAG
Ga0242662_102355521	3300022533	Soil	PQLGGARGLRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSSSTVG
Ga0242677_10256032	3300022713	Soil	LRIVLDVRQATDGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPPSAPVIAGADTMNTSSTAG
Ga0242665_102037842	3300022724	Soil	SQLGVRVLRIVLDVRQTADGRLAGDLRMAGSRASRPFEGIIELVGLIEVFLANPPSAPGMAGVDTINPGSPAL
Ga0207692_109479071	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GARGLRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNPSSTVG
Ga0207693_100431922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVQQTADGRLAGDLRTADSRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTMNSTSTVG
Ga0207663_114267462	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DGRLAGDVRMAGTCATRPFEGIIELVGLIEVFLANPPSAPGIAGADTIAPSGTAG
Ga0207700_100136804	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LHIVLDVQQTADGRLAGDIRVAGSRATRPFEGIIELVGLIEVFLANPPSGPGITGAETVTQTSTAG
Ga0207700_100352772	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LRIVLDVQQTAEGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSVPGIAGADTIAPSGTAG
Ga0207664_100656121	3300025929	Agricultural Soil	MSALRTINRRLARRPQLGGARGLHIVLDVQQTADGRLAGDIRVAGSRATRPFEGIIELVGLIEIFLANPPSGPGITGAETVTQTSTAG
Ga0209060_104190472	3300027826	Surface Soil	LQIVLDVRQTPDGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPASGTVGADPINTGTHAG
Ga0209701_104524552	3300027862	Vadose Zone Soil	ARVLRIVLDVRQTSEGGLAGDLRMAGSRASRPFEGIIELVGLIEVFLANPPSPPGISGADTVIPGSPAS
Ga0170834_1010229091	3300031057	Forest Soil	LRIVLDVRQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPSAPAITGADTISPGNAAG
Ga0170818_1102048822	3300031474	Forest Soil	LRIVLDVRQTADGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLANPPAPGIAGADTVTQSSSAG
Ga0318516_100155224	3300031543	Soil	LHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318516_102056272	3300031543	Soil	LRIVLDVRQTAEGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLAGPPAAPGISGADAVNPRSPAG
Ga0318516_104159811	3300031543	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGISGVEGINPGSPAL
Ga0318534_104313251	3300031544	Soil	LRIVLDVQQTADGRLAGDLRMAGSRASSPFEGIIELVGLIEVFLANSPSAPRISGVDAISPGSAGS
Ga0318541_100983122	3300031545	Soil	STLNRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318538_106797732	3300031546	Soil	LRIVLDVRQTAEGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLAGPPAAPGISGADAVNPHSPA
Ga0310915_101636663	3300031573	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318555_103046322	3300031640	Soil	LRIVLDVQQTAEGRLAGDVRMAGSRASRPFEGIIELVGLIEVFLANPPSAPGISGVEGINPGSPAL
Ga0318542_102818722	3300031668	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTVAPSSTAG
Ga0307469_106500961	3300031720	Hardwood Forest Soil	LRIVLDVRQTADGRLAGDLRMPGTRATRPFEGIIELVGLIEVFLANPPASGMAGADAINTGSTAG
Ga0318494_105631001	3300031751	Soil	VLDVQQTADGRLAGDLRMAGSRASSPFEGIIELVGLIEVFLANSPSAPRISGVDAISPGSAGS
Ga0318537_103322541	3300031763	Soil	LDVQQTAEGRLAGDVRMAGSRASRPFEGIIELVGLIEVFLANPPSAPGISGVEGINPGSPAL
Ga0318554_101007711	3300031765	Soil	VRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANTPSAPGIAGADVITPSTTAG
Ga0318566_103492921	3300031779	Soil	LRIVLDVQQTAEGRLAGDVRMAGSRASRPFEGIIELVGLIEVFLANPPSVPGISGVEGINPGSPAL
Ga0318552_105982721	3300031782	Soil	LRIVLDVRQTADGRLAGDLRMAGTHATRPFEGIIELVGLIEVFLANPPSAPGISGVEGINPGSPAL
Ga0318565_101058502	3300031799	Soil	GMWAHSTLNRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318499_100695541	3300031832	Soil	NRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0306925_110860292	3300031890	Soil	LRIVLDVQQTAEGRLAGDVRMAGSRASRPFEGIIELVGLIEVFLANPPSVPGIAGVEGINPGSPAL
Ga0318551_100820082	3300031896	Soil	MLAGRPQLGARVLRIVLDVQQTAEGRLAGDVRMAGSRASRPFEGIIELVGLIEVFLANPPSAPGISGVEGINPGSPAL
Ga0318551_105929602	3300031896	Soil	LRIVLDVRQTADGRLAGDLRMAGTHATRPFEGIIELVGLIEVFLANPPSAPGIAGADTVAPSSTAG
Ga0306921_104133892	3300031912	Soil	LRIVLDVQQTADGRLVGDLRMAGSRASSPFEGIIELVGLIEVFLANSPSAPRISGVDAISPGSAGS
Ga0310912_110415261	3300031941	Soil	LHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANTPSAPGIAGADVITPSTTA
Ga0310916_106631172	3300031942	Soil	LRIVLDVRQTAEGRLAGDLRMAGSRATRPFEGIIELVGLIEVFLAGPPAAPGISGADAVNPHSPAG
Ga0306926_117720702	3300031954	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSAPGIAGADTITPSGTAG
Ga0318562_101180741	3300032008	Soil	LDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSPGIAGADTITPSSTA
Ga0318562_103152821	3300032008	Soil	LRIVLDVRQTADGRLAGDLRMAGTHATRPFEGIIELVGLIEVFLANPPSAPGIAGADTITPSGTAG
Ga0318563_103191561	3300032009	Soil	LRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSPGIAGADTITPSSTAG
Ga0318507_103367791	3300032025	Soil	LRIVLDVQQTADGRLAGDLRMAGSRASSPFEGIIELVGLIEVFLANSPSAPRISGVDAISPG
Ga0318556_104497722	3300032043	Soil	LRIVLDVRQTADGRLAGDLRMAGTHATRPFEGIIELVGLIEVFLANPPSAPGIAGADTVTPSGSPIP
Ga0318556_107141132	3300032043	Soil	RGLRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSPGIAGADTITPSSTAG
Ga0318570_101452952	3300032054	Soil	MWAHSTLNRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318513_101176111	3300032065	Soil	HSTLNRRLARRPQLGGARGLHIVLDVRQTADGRLAGDVRMAGSRAIRPFEGIIELVGVIEAFLANPPSAPGIAGADVITPSTTAG
Ga0318513_106477932	3300032065	Soil	PQLGGARVLRIVLDVRQTADGRLAGDLRMAGTRATRPFEGIIELVGLIEVFLANPPSPGIAGADTITPSSTAG
Ga0311301_120589701	3300032160	Peatlands Soil	VRIVLDVRQTADGRLAGDLRMAGSCATRPFEGIIELVGLIEVFLANPASAPGIAGADTMNTSSTAG
Ga0335078_100219664	3300032805	Soil	MVLDVRQTADGHLAGVLQMAGSRASQPFEGIIELVGLIEVFLANPPAGAGIPAADGIDPGKPPG
Ga0310914_115074561	3300033289	Soil	LRIVLDVRQTADGRLAGDLRMAGTHATRPFEGIIELVGLIEVFLANPPSAPGIAAADTVNPASTAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences