Metagenome / Metatranscriptome Family F054270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	66 residues
Representative Sequence	MGRLQRSDRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES
Number of Associated Samples	101
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.61 %
% of genes near scaffold ends (potentially truncated)	21.43 %
% of genes from short scaffolds (< 2000 bps)	75.71 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil (12.143 % of family members)
Environment Ontology (ENVO)	Unclassified (23.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.19% β-sheet: 0.00% Coil/Unstructured: 46.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00027	cNMP_binding	7.14
PF03401	TctC	3.57
PF09839	DUF2066	1.43
PF00982	Glyco_transf_20	1.43
PF13924	Lipocalin_5	1.43
PF00072	Response_reg	0.71
PF04392	ABC_sub_bind	0.71
PF06725	3D	0.71
PF05683	Fumerase_C	0.71
PF02910	Succ_DH_flav_C	0.71
PF00596	Aldolase_II	0.71
PF07075	DUF1343	0.71
PF10778	DehI	0.71
PF01612	DNA_pol_A_exo1	0.71
PF06482	Endostatin	0.71
PF02897	Peptidase_S9_N	0.71
PF12681	Glyoxalase_2	0.71
PF00437	T2SSE	0.71
PF01344	Kelch_1	0.71
PF07813	LTXXQ	0.71
PF02464	CinA	0.71
PF01968	Hydantoinase_A	0.71
PF13185	GAF_2	0.71
PF01039	Carboxyl_trans	0.71
PF00561	Abhydrolase_1	0.71
PF05118	Asp_Arg_Hydrox	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.57
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.86
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.43
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.71
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.71
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.71
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.71
COG1770	Protease II	Amino acid transport and metabolism [E]	0.71
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.71
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.71
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
All Organisms	root	All Organisms	47.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
cellular organisms	root	All Organisms → cellular organisms	47.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.29 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.43 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.43 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	7.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.43 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10236788	Not Available	741	Open in IMG/M
3300004152\|Ga0062386_100180700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300004633\|Ga0066395_10617948	Not Available	636	Open in IMG/M
3300004633\|Ga0066395_10620941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300005171\|Ga0066677_10667659	Not Available	584	Open in IMG/M
3300005179\|Ga0066684_10239582	Not Available	1187	Open in IMG/M
3300005332\|Ga0066388_100561427	Not Available	1769	Open in IMG/M
3300005332\|Ga0066388_100671977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1647	Open in IMG/M
3300005434\|Ga0070709_10644465	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300005436\|Ga0070713_100653972	Not Available	1001	Open in IMG/M
3300005439\|Ga0070711_100545155	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300005553\|Ga0066695_10435572	Not Available	809	Open in IMG/M
3300005554\|Ga0066661_10066748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2093	Open in IMG/M
3300005554\|Ga0066661_10414658	Not Available	825	Open in IMG/M
3300005560\|Ga0066670_10742878	Not Available	594	Open in IMG/M
3300005598\|Ga0066706_11513015	Not Available	505	Open in IMG/M
3300005764\|Ga0066903_104936686	Not Available	708	Open in IMG/M
3300006028\|Ga0070717_11144192	Not Available	708	Open in IMG/M
3300006047\|Ga0075024_100608752	Not Available	588	Open in IMG/M
3300006052\|Ga0075029_100173074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300006052\|Ga0075029_100218976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1194	Open in IMG/M
3300006059\|Ga0075017_100036119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3275	Open in IMG/M
3300006059\|Ga0075017_101430800	Not Available	544	Open in IMG/M
3300006086\|Ga0075019_10094481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1713	Open in IMG/M
3300006086\|Ga0075019_10164310	Not Available	1303	Open in IMG/M
3300006102\|Ga0075015_100224977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1008	Open in IMG/M
3300006162\|Ga0075030_100096447	All Organisms → cellular organisms → Bacteria → Proteobacteria	2415	Open in IMG/M
3300006162\|Ga0075030_100521893	Not Available	944	Open in IMG/M
3300006173\|Ga0070716_101149763	Not Available	621	Open in IMG/M
3300006174\|Ga0075014_100190452	Not Available	1028	Open in IMG/M
3300006174\|Ga0075014_100506807	Not Available	676	Open in IMG/M
3300006175\|Ga0070712_100005792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7637	Open in IMG/M
3300006176\|Ga0070765_101235669	Not Available	705	Open in IMG/M
3300006800\|Ga0066660_10121564	Not Available	1888	Open in IMG/M
3300006806\|Ga0079220_10008307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3904	Open in IMG/M
3300006954\|Ga0079219_11075589	Not Available	678	Open in IMG/M
3300010361\|Ga0126378_10523694	Not Available	1301	Open in IMG/M
3300010376\|Ga0126381_100567139	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300012198\|Ga0137364_10455197	Not Available	960	Open in IMG/M
3300012201\|Ga0137365_10138017	Not Available	1833	Open in IMG/M
3300012206\|Ga0137380_10027514	All Organisms → cellular organisms → Bacteria → Proteobacteria	5237	Open in IMG/M
3300012206\|Ga0137380_10045685	All Organisms → cellular organisms → Bacteria → Proteobacteria	4023	Open in IMG/M
3300012207\|Ga0137381_10018780	All Organisms → cellular organisms → Bacteria → Proteobacteria	5446	Open in IMG/M
3300012207\|Ga0137381_10773476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	833	Open in IMG/M
3300012208\|Ga0137376_10161944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300012209\|Ga0137379_10180189	All Organisms → cellular organisms → Bacteria → Proteobacteria	2025	Open in IMG/M
3300012211\|Ga0137377_10223334	Not Available	1809	Open in IMG/M
3300012349\|Ga0137387_10195771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300012351\|Ga0137386_10526751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300012354\|Ga0137366_10511124	Not Available	867	Open in IMG/M
3300012356\|Ga0137371_11429831	Not Available	506	Open in IMG/M
3300012359\|Ga0137385_10366159	Not Available	1232	Open in IMG/M
3300012917\|Ga0137395_10871938	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300016270\|Ga0182036_10391400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300016319\|Ga0182033_10209221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300016319\|Ga0182033_10240658	Not Available	1464	Open in IMG/M
3300016422\|Ga0182039_10446284	Not Available	1108	Open in IMG/M
3300017822\|Ga0187802_10002069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5594	Open in IMG/M
3300017823\|Ga0187818_10078444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1424	Open in IMG/M
3300017927\|Ga0187824_10009359	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300017927\|Ga0187824_10387956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300017928\|Ga0187806_1013696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2292	Open in IMG/M
3300017955\|Ga0187817_10231776	Not Available	1177	Open in IMG/M
3300017959\|Ga0187779_10020732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3748	Open in IMG/M
3300017966\|Ga0187776_11503925	Not Available	517	Open in IMG/M
3300017973\|Ga0187780_10467733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300017974\|Ga0187777_10082589	All Organisms → cellular organisms → Bacteria → Proteobacteria	2095	Open in IMG/M
3300017974\|Ga0187777_10967011	Not Available	615	Open in IMG/M
3300018007\|Ga0187805_10025130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2622	Open in IMG/M
3300018032\|Ga0187788_10402168	Not Available	575	Open in IMG/M
3300018058\|Ga0187766_10013946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4586	Open in IMG/M
3300018058\|Ga0187766_10020473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3792	Open in IMG/M
3300018058\|Ga0187766_10033527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2986	Open in IMG/M
3300018058\|Ga0187766_11089308	Not Available	573	Open in IMG/M
3300018060\|Ga0187765_10000513	All Organisms → cellular organisms → Bacteria → Proteobacteria	14261	Open in IMG/M
3300018468\|Ga0066662_12171790	Not Available	582	Open in IMG/M
3300018482\|Ga0066669_10822781	Not Available	824	Open in IMG/M
3300019888\|Ga0193751_1000408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34814	Open in IMG/M
3300019888\|Ga0193751_1001594	All Organisms → cellular organisms → Bacteria → Proteobacteria	14383	Open in IMG/M
3300019888\|Ga0193751_1011450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4648	Open in IMG/M
3300019888\|Ga0193751_1054235	Not Available	1709	Open in IMG/M
3300019888\|Ga0193751_1058911	All Organisms → cellular organisms → Bacteria → Proteobacteria	1614	Open in IMG/M
3300020010\|Ga0193749_1003744	All Organisms → cellular organisms → Bacteria → Proteobacteria	2908	Open in IMG/M
3300020010\|Ga0193749_1064257	Not Available	692	Open in IMG/M
3300020150\|Ga0187768_1041207	Not Available	1018	Open in IMG/M
3300020579\|Ga0210407_10291289	Not Available	1274	Open in IMG/M
3300020580\|Ga0210403_10635909	Not Available	859	Open in IMG/M
3300020581\|Ga0210399_10044119	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
3300021420\|Ga0210394_10339824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300021560\|Ga0126371_10050423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3983	Open in IMG/M
3300021560\|Ga0126371_11355510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300021560\|Ga0126371_12270423	Not Available	655	Open in IMG/M
3300025915\|Ga0207693_10777361	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300026489\|Ga0257160_1025814	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300026979\|Ga0207817_1010449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300027003\|Ga0207722_1031136	Not Available	580	Open in IMG/M
3300027039\|Ga0207855_1011113	Not Available	1273	Open in IMG/M
3300027049\|Ga0207806_1012524	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300027070\|Ga0208365_1000552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3551	Open in IMG/M
3300027070\|Ga0208365_1010625	Not Available	1134	Open in IMG/M
3300027090\|Ga0208604_1002348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1770	Open in IMG/M
3300027605\|Ga0209329_1085073	Not Available	688	Open in IMG/M
3300027898\|Ga0209067_10149543	Not Available	1239	Open in IMG/M
3300027911\|Ga0209698_10073642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2913	Open in IMG/M
3300028906\|Ga0308309_11713527	Not Available	533	Open in IMG/M
3300030916\|Ga0075386_12118601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300030916\|Ga0075386_12207598	Not Available	2161	Open in IMG/M
3300030969\|Ga0075394_11476195	Not Available	502	Open in IMG/M
3300031057\|Ga0170834_100382546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1872	Open in IMG/M
3300031057\|Ga0170834_100660714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1370	Open in IMG/M
3300031057\|Ga0170834_104266138	Not Available	1451	Open in IMG/M
3300031057\|Ga0170834_111772568	Not Available	577	Open in IMG/M
3300031057\|Ga0170834_113663780	Not Available	1217	Open in IMG/M
3300031231\|Ga0170824_100399186	Not Available	627	Open in IMG/M
3300031231\|Ga0170824_101830088	Not Available	1065	Open in IMG/M
3300031231\|Ga0170824_106600545	Not Available	2127	Open in IMG/M
3300031231\|Ga0170824_107613470	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300031231\|Ga0170824_118680139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300031231\|Ga0170824_125742468	Not Available	851	Open in IMG/M
3300031231\|Ga0170824_127348635	Not Available	553	Open in IMG/M
3300031446\|Ga0170820_17855152	Not Available	1122	Open in IMG/M
3300031469\|Ga0170819_12742009	Not Available	760	Open in IMG/M
3300031474\|Ga0170818_100335265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300031474\|Ga0170818_104080095	Not Available	1058	Open in IMG/M
3300031474\|Ga0170818_111529973	Not Available	1796	Open in IMG/M
3300031543\|Ga0318516_10654935	Not Available	598	Open in IMG/M
3300031546\|Ga0318538_10643961	Not Available	575	Open in IMG/M
3300031564\|Ga0318573_10591092	Not Available	598	Open in IMG/M
3300031668\|Ga0318542_10677245	Not Available	539	Open in IMG/M
3300031754\|Ga0307475_10122500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2049	Open in IMG/M
3300031754\|Ga0307475_11084386	Not Available	627	Open in IMG/M
3300031820\|Ga0307473_10445549	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300031833\|Ga0310917_10270421	Not Available	1146	Open in IMG/M
3300031879\|Ga0306919_10016757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4324	Open in IMG/M
3300031890\|Ga0306925_10680541	Not Available	1079	Open in IMG/M
3300031962\|Ga0307479_10262035	Not Available	1708	Open in IMG/M
3300032001\|Ga0306922_11828568	Not Available	597	Open in IMG/M
3300032892\|Ga0335081_10115182	All Organisms → cellular organisms → Bacteria → Proteobacteria	3948	Open in IMG/M
3300033289\|Ga0310914_10023790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.29%
Aquatic	Environmental → Aquatic	15.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.29%
Sediment	Environmental → Aquatic → Sediment	10.00%
Freshwater	Environmental → Aquatic → Freshwater	5.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	12.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.43%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102367883	3300003505	Forest Soil	TEGGNRFMGHAQRSNRARLLPKRKPSTRNEIEELREENRQLRELVAHLSKLAIARIAEAAESEEEQAG*
Ga0062386_1001807002	3300004152	Bog Forest Soil	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITESTEPEEQSANTES*
Ga0066395_106179481	3300004633	Tropical Forest Soil	MGRTQGSNRHRAQAIPKVRIKTRNEIEELREENRQLRELVAHLSKLALERITETAEPREQSTVSQKITNP*
Ga0066395_106209412	3300004633	Tropical Forest Soil	MGHIQRSERHRAQALSRRKAKTRNEIGELREENRQLRELVAHLSKLALTRITEPAEPEEQSAGAEN*
Ga0066677_106676591	3300005171	Soil	MGRTQRSDRHRTQALPKRKIKTRNEIEELREENRQLRELVAHLSKLALEGITEPAESREPSADNES*
Ga0066684_102395822	3300005179	Soil	MGRIQRSDRHRAQAQPHRSIKTRNEIEELREENRQLRELVAHLSKLALGRITEAVEPE*
Ga0066388_1005614272	3300005332	Tropical Forest Soil	MGHVQRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRIAESSEPEEQSANTEA*
Ga0066388_1006719772	3300005332	Tropical Forest Soil	MAHIERSDRRQAQVPKRKIKPRNEIQRLREENRQLRELVVHLSKLAVTQITEIVETGEHSARAEN*
Ga0070709_106444652	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRGQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVARLSKIALGRITEAAEPEEQSASAES*
Ga0070713_1006539722	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGRGQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVARLSKIALGRITEAAEPEEQSASAES*
Ga0070711_1005451552	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIQRSDRHRAQAPSKHKVRTRDKIGELREENRKLRELVAQLSKLALTRITESAEPEEQPANTES*
Ga0066695_104355721	3300005553	Soil	MGRTQRSDRDRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG*
Ga0066661_100667481	3300005554	Soil	MGRTQRSDRHRAQALPKRKIKTRNEIEELREENWRLRELVAHLSKLALTRITEAAEPGEGSASQTGSLRKTVERGRQG*
Ga0066661_104146582	3300005554	Soil	MGRLQRADRHRAQAPPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES*
Ga0066670_107428782	3300005560	Soil	MGRIQRSDRHRAQAQPNRSIKTRNEIEELREENRQLRELVAHLSKLALGRITEAVEPE*
Ga0066706_115130151	3300005598	Soil	MGRTQRSDRHRAQALPKRKIKTRNEIEELREENRQLRELVAHLSKLALEGITEPAESREPSADNES*
Ga0066903_1049366862	3300005764	Tropical Forest Soil	MGHIRRSGRHRAQALPKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESPEPEEQPVNTES*
Ga0066903_1077475291	3300005764	Tropical Forest Soil	MGHVVRSSRHRAQAPSKRKVKAQSEIEELREENQRLRELVAHLSKLALERVTEIAEPGEPPSNDPYVGP*
Ga0070717_111441922	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGHAQRSNRAQLLPKRKPSTRNEIEELREENRQLRELVAHLSKLAIARIAEAAETEEEQAG*
Ga0075024_1006087522	3300006047	Watersheds	GRTQRSDRDRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG*
Ga0075029_1001730743	3300006052	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQAANTES*
Ga0075029_1002189762	3300006052	Watersheds	MGRIQRSNRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAAEAGEQSASPEN*
Ga0075017_1000361192	3300006059	Watersheds	MGHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAAEAGEQSASPEN*
Ga0075017_1014308001	3300006059	Watersheds	MGHAQRSNRALLLPKRKPSTRNEIEELREENRQLREVVAHLTKLAVAQITEAAESEEQQAG*
Ga0075019_100944812	3300006086	Watersheds	MILNRTGDRFTGHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAAEAGEQSASPEN*
Ga0075019_101643101	3300006086	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQ
Ga0075015_1002249772	3300006102	Watersheds	MGRIQRSNRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN*
Ga0075030_1000964473	3300006162	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES*
Ga0075030_1005218932	3300006162	Watersheds	MGHAQRSNRAQLLPKRKPSTRNEIEQLREENRQLRELVAHLSKLAIARIAEAAESEEEQAG*
Ga0070716_1011497633	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ALPKRKVKTQTEIEELREENRRLRELVARLSKIALGRITEAAEPEEQSASAES*
Ga0075014_1001904521	3300006174	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITE
Ga0075014_1005068072	3300006174	Watersheds	MGHAQRSNRAQLLPKRKPSTRNEIEQLREENRQLRELVAHLSKLAIARITEAAESEEEQAG*
Ga0070712_10000579212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIRRSDRHRAQAPSKHKVRTRDKIGELREENRKLRELVAQLSKLALTRITESAEPEEQPANTES*
Ga0070765_1012356692	3300006176	Soil	MGRIQRSDRHRVQALPKRKVKTRNEIEELRQENRRLRELVAHLSKLALGRISEAAEPKEQSASAES*
Ga0066660_101215643	3300006800	Soil	MGRLQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSAGAES*
Ga0079220_100083072	3300006806	Agricultural Soil	MGRIRRSDSHRAQAPSKHKVRTRNKIGELQEENRMLRELVAHLSKLALTRITESAEPEEQPANTES*
Ga0079219_110755892	3300006954	Agricultural Soil	MGRIRRSDSHRAQAPSKHKVRTRDKIGELQEENRKLRELVAHLSKLALTRITESAEPEEQPANTES*
Ga0126378_105236942	3300010361	Tropical Forest Soil	MGRALRTDRYRARALPKRKAQDEIEEFREENRRLRELVAHLSKLALERVTEITAEPGEPPATKRRLSSDSI*
Ga0126381_1005671392	3300010376	Tropical Forest Soil	MGHVVRSNRHRALTRPKRKVKAQSEIEELREENRRLRELVAHLSKLALERVTEIAEPGEPPSDPVEVL*
Ga0137364_104551972	3300012198	Vadose Zone Soil	ALPKRKVITRNEIEELRKENRRLRELVTHLSKLALGRIIEAAEPEEQSASAES*
Ga0137365_101380171	3300012201	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVKTRNEIEELRKENRRLRELVTHLSKLALGRIIEAAEPEEQSASAKS*
Ga0137380_100275146	3300012206	Vadose Zone Soil	MGRVQRSDRHRVQALSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES*
Ga0137380_100456856	3300012206	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVITRNEIEELRKENRRLRELVTHLSKLALGRIIEAAEPEEQSASAKS*
Ga0137381_100187802	3300012207	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES*
Ga0137381_107734762	3300012207	Vadose Zone Soil	MGRTQRSNRHRAQGLPKRKAKSQNEVEELREENRQLRELVAKLSSAVERITEGAEPGQPSGNNES*
Ga0137376_101619441	3300012208	Vadose Zone Soil	MGRLQRSNRHRPQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES*
Ga0137379_101801892	3300012209	Vadose Zone Soil	MGRVQRCDRHRVQALSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES*
Ga0137377_102233344	3300012211	Vadose Zone Soil	MGRRQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES*
Ga0137387_101957712	3300012349	Vadose Zone Soil	MGRVQRSDRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES*
Ga0137386_105267511	3300012351	Vadose Zone Soil	MGRTQRSNRHRAQALPKRKAKSQNEVEELREENRQLRELVAKLSSAVERITEGAEPGQPSGNNES*
Ga0137366_105111242	3300012354	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVITRNEIEELREENRRLRELVTHLSKLALGRIIEAAEPEEQSASAKS*
Ga0137371_114298312	3300012356	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVKTRNEIEELREENRRLRELVTHLSKLALGRIIEAAEPEEQSASAES*
Ga0137385_103661593	3300012359	Vadose Zone Soil	MGRLQRSDRHRAQALPKRKVITRNEIEELRKENRRLRELVTHLSKLALGRIIEAAEPEEQSASAES*
Ga0137395_108719382	3300012917	Vadose Zone Soil	MGPDRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES*
Ga0182036_103914001	3300016270	Soil	LTFSWPIRFGGSKSNGDRFMGRIRRSGRHRAQALPKHKVKARDKIGELREENRKLRELVAHLSELALTRITESSEPEEAGQY
Ga0182033_102092211	3300016319	Soil	KSNGDRFMGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELSLTRITESSEPEEQPANTES
Ga0182033_102406583	3300016319	Soil	MGRIRRSGRHRAQALPKHKVKARDKIGELREENRKLRELVAHLSELALTRITESSEPEEAGQY
Ga0182039_104462841	3300016422	Soil	KSNGDRFMGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTES
Ga0187802_100020697	3300017822	Freshwater Sediment	GHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN
Ga0187818_100784442	3300017823	Freshwater Sediment	MGHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN
Ga0187824_100093595	3300017927	Freshwater Sediment	MGRIRRSNRHRAQAPKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTKS
Ga0187824_103879561	3300017927	Freshwater Sediment	RFALMILNRTGDRFMGHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN
Ga0187806_10136962	3300017928	Freshwater Sediment	MILNRTGDRFTGHIQRSIRHRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN
Ga0187817_102317761	3300017955	Freshwater Sediment	MKRIQRSERHRAQALPKHRIENSNEILELREENKRLRELVAQLSKMALGRIVEALEPGERSVSDRK
Ga0187779_100207324	3300017959	Tropical Peatland	MGHVQRSDRRRAQALPKRKTKTRNEIGELREENRQLRELIAHLSELAVTQITEAVESGEQSASTED
Ga0187776_115039252	3300017966	Tropical Peatland	MGRIRRSGHHRAQVLSKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESSEPEEQSANTES
Ga0187780_104677331	3300017973	Tropical Peatland	MGHVQRSDRRRAHAWPKLKTKARTEIGELREENRQLRELIAHLSELAVTQITEAVESGEQSASTED
Ga0187777_100825892	3300017974	Tropical Peatland	MGHVQRSDRRRAQALSKRKTKTRNEIGELREENRQLRELIAHLSELAVTQITEEAESGERSASTED
Ga0187777_109670111	3300017974	Tropical Peatland	MGRILRTDRHRAQASPKRKSQGEIEELREENRRLREIVAHLSKLAVERITETVEPGEPSASDPRAGR
Ga0187805_100251301	3300018007	Freshwater Sediment	HRIQALPKRKIKTRNEIEELREENRQLRELVAHLSKVALARITEAVEAAEAGEQSASPEN
Ga0187788_104021681	3300018032	Tropical Peatland	MGRIRRSDRHRAQAPSKHKVRMRDKIGELREENRKLRELVAHLSKLALTRITETAEPEQQPANTES
Ga0187766_100139467	3300018058	Tropical Peatland	MGRILRTDRHRAQASPKRKSQGEIEELREENRRLREIVAHLSKLAVERITQTVEPGEPSASDPRAGR
Ga0187766_100204731	3300018058	Tropical Peatland	RFMGRIRRSIRHRAQAPSNHKVKTRDKIGELREENRKLRELVAHLSKLALTRITQSSEPEEQSANTEG
Ga0187766_100335272	3300018058	Tropical Peatland	MGHVQRSDRRRAQALSKRKTKTRNEIGELREENRQLRELIAHLSELAVTQITEEAESGERSVSTED
Ga0187766_110893081	3300018058	Tropical Peatland	MGRILRSDRNRVQALPKRRVKAQNEIEELREENRRLRELVAHLSKLALERVTEIAEPGEPPSRR
Ga0187765_100005139	3300018060	Tropical Peatland	MGRILRTDRHRAQASPKRKSQGEIEELREENRRLRELVAHLSKLAVERITETVEPGEPSASDPRAGR
Ga0066662_121717901	3300018468	Grasslands Soil	MGRTQRSDRHRTQALPKRKIKTRNEIEELREENRQLRELVAHLSKLALEGITEPAESREPSADNES
Ga0066669_108227811	3300018482	Grasslands Soil	MGRPQRTGRHRAQALPKRKVKIQTNIEELREENRRLRELVAHLSKLALGRITEAAKAEEQSAGAES
Ga0193751_100040827	3300019888	Soil	MGRLQRADRHRAQALPKRKVKTQTEIEELREENRRLRQLVAHLSKLALGRITEAADPEAQSASAES
Ga0193751_10015943	3300019888	Soil	MGRLQRADRHRAQALPKRKVKTRTEIEELREENRRLRELVAHLSKLALTRIAEAAEPEEQSANTKS
Ga0193751_10114504	3300019888	Soil	MGRIRRSDRHRAQAPSKHKVKSRNKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES
Ga0193751_10542352	3300019888	Soil	MGRILRSDRHRASPPKRKVKTRDKIEELREENRKLRELVAHLSKLALARITESAEPEEQSADTES
Ga0193751_10589112	3300019888	Soil	MGRTQRSDRHRAQALLKYKVKTRDKIEELREENRKLRELVAHLSKLALTRIAESAEPEEQSANTES
Ga0193749_10037444	3300020010	Soil	MGRLQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALTRIAEAAEPEEQSANTKS
Ga0193749_10642572	3300020010	Soil	MGRIQRSDRHCAQAPSKHKVKTRDKIEELREENRKLRELVAHLSKLTLARITESAEPEE
Ga0187768_10412072	3300020150	Tropical Peatland	MGHVQRSDRRRAQALSKRKTKTRNEIGELREENRQLRELIAHLSELAVTQITEEAESGER
Ga0210407_102912893	3300020579	Soil	MGRIQRADRHRAQALPQRKVKTQTKIEELREENRRLRELVAHLSKLALGRITEAAKAEEQSASPES
Ga0210403_106359093	3300020580	Soil	GNRFMGHAQRSNRAQLLPKRKPSTRNEIEQLREENRQLRELVAHLSKLAIARIAEAAESEEEQAG
Ga0210399_100441194	3300020581	Soil	MGHAQRSNRARLLPKRKPSTRNEIEELREENRQLRELVAHLSKLAIARIAEAAESEEEQA
Ga0210394_103398243	3300021420	Soil	MGRIRRSDRHRAQAPSKHKVRTRDKIGELQEENRKLRELVAHLSKLALTRITEPAEPEQQPNNAES
Ga0126371_100504235	3300021560	Tropical Forest Soil	MGRALRTDRYRARALPKRKVKAQDEIEELREENRRLRELVAHLSKLALERVTEITAEPGEPPATKRRLSSDSI
Ga0126371_113555102	3300021560	Tropical Forest Soil	MGHIQRSERHRAQALSRRKAKTRNEIGELREENRQLRELVAHLSKLALTRITEPAEPEEQSAGAEN
Ga0126371_122704232	3300021560	Tropical Forest Soil	MGHVVRSNRHRAQAPSKRKVKAQSEIEELREENQRLRELLAHLSKLALERVTEIAEPGEPTPNDPYFRP
Ga0207693_107773611	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRGQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVARLSKIALGRITEAAEPEEQSASAES
Ga0257160_10258143	3300026489	Soil	MGPTQRSDRHRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG
Ga0207817_10104491	3300026979	Tropical Forest Soil	SGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTES
Ga0207722_10311361	3300027003	Tropical Forest Soil	MGHVQRSDRRHVQALSKRKTKTRNEIGELREENRQLRELIAHLSELAVTQITEEAESGEQSASN
Ga0207855_10111132	3300027039	Tropical Forest Soil	MGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPGEQPANTES
Ga0207806_10125242	3300027049	Tropical Forest Soil	MERIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTES
Ga0208365_10005524	3300027070	Forest Soil	MGRIRRSDRHRAQAPSKHKVRTRDKIGELREENRKLRELVAQLSKLALTRITESAELEEQPANTES
Ga0208365_10106252	3300027070	Forest Soil	MGHAQRSNRARLLPKRKPSTRNEIEELREENRQLRELVAHLSKLAIARITEAAESEEEQA
Ga0208604_10023482	3300027090	Forest Soil	MGRIRRSDRHRAQAPSKHKVGTRDKIGELQEENRKLRELVAHLSKLALTRITEPAEPEEQPANTES
Ga0209329_10850732	3300027605	Forest Soil	MGHAQRSNRAQLLPKRKRSTRNEIEELREENRQLRELVAHLSKLAIARIAEAAESEEEQA
Ga0209067_101495431	3300027898	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQAAN
Ga0209698_100736423	3300027911	Watersheds	MGRIRRSDRHRAQAPSKHKVKPRDKIGELREENRKLRELVAHLSKLAIARIAEAAESEEEQAG
Ga0308309_117135272	3300028906	Soil	MGRIQRSDRHRVQALPKRKVKTRNEIEELRQENRRLRELVAHLSKLALGRISEAAEPKEQSASAES
Ga0075386_121186011	3300030916	Soil	MGRTQRSDRDRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG
Ga0075386_122075984	3300030916	Soil	MGRRQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES
Ga0075394_114761952	3300030969	Soil	MGRLQRTGRHRAQALPKREVKTQTKIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSASAES
Ga0170834_1003825463	3300031057	Forest Soil	MGRTQRSDRHRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG
Ga0170834_1006607143	3300031057	Forest Soil	MGHAQRSNRAQLLPKRKRSTRNEIEELREENRQLRELVAHLSKLAIARITEAAESEEEQA
Ga0170834_1042661381	3300031057	Forest Soil	MGCRQRADRHCAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEA
Ga0170834_1117725681	3300031057	Forest Soil	QRSDRHRAQVLPKRKVKSQNEIEELREENRRLRELVAHLSKLALERITEAAQPGEPSANNES
Ga0170834_1136637803	3300031057	Forest Soil	MGRIQRSNRHRIQALPKRKVKTRNEIEELREENRQLRELVAHLSKVAMARITEAAEAGEQSASPEN
Ga0170824_1003991862	3300031231	Forest Soil	MGRLQRTGRHRAQALPKREVKTQTKIEELREENRRLRELVAHLSKLALGRITEAAELEEQSAGGES
Ga0170824_1018300883	3300031231	Forest Soil	MGRIQRADRHRAQALPQRKVKTQTKIEELREENRRLRELVAHLSKLALGRITEAAKAEEQ
Ga0170824_1066005452	3300031231	Forest Soil	MGRTPRSDRYRAQALPKRKIKTRDEIEELRKENRKLRELVAHLSKVAVARITEAAEPGEQSASAES
Ga0170824_1076134701	3300031231	Forest Soil	MGHAQRSNRALLLPKRKPSTRNEIEELREENTQLREVVAHLTKLAVAQITEAAESEEQQA
Ga0170824_1186801392	3300031231	Forest Soil	MGRTQRSDRHRAQALPKRKIKTRNEIEELREENWRLREVVAHLSKLALTRITEAAEPGEGSASQTGSPRKTVERGRQG
Ga0170824_1257424683	3300031231	Forest Soil	MGRIQRSNRHRIQALPKRKVKTRNEIEELREENRQLRELVAHLSKVALARITEAAEAGEQSASPEN
Ga0170824_1273486351	3300031231	Forest Soil	MGRRQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKIALGRITEAAEPEEQSASAES
Ga0170820_178551523	3300031446	Forest Soil	MGRIQRADRHRAQALPQRKVKTQTKIEELREENRRLRELVAHLSKIALGRITEAAEPEEQSASAES
Ga0170819_127420093	3300031469	Forest Soil	MGRTQRSDRHRAQALPKRKIKTRNEIEELREENRRLRELVAHLSKLALTRITEAAEPGEGSASQTGSLRKTVERGRQG
Ga0170818_1003352652	3300031474	Forest Soil	MGRLQRADRHRAQALPKRKVKTQTEIEELREENRRLRELVAHLSKLALGRITEAAEPEEQSAGAES
Ga0170818_1040800953	3300031474	Forest Soil	MGRIQRADRHRAQALPQRKVKTQTKIEELREENRRLRELVAHLSKLALGRITEA
Ga0170818_1115299733	3300031474	Forest Soil	MGRRQRADRHRAQALPKRKVKTQTEIEELREENRRLRELAAHLSKLALGRITEAAEPEEQSASAES
Ga0318516_106549351	3300031543	Soil	MGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPAN
Ga0318538_106439611	3300031546	Soil	MGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPE
Ga0318573_105910922	3300031564	Soil	SKSNGDRFMGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTGS
Ga0318542_106772451	3300031668	Soil	MGRVLRSVRHRAQAPRKRKAKAQNEIEELREENRRLRELVAHLSKLALERVTEIAEPGEPPANEPCVGVE
Ga0307475_101225004	3300031754	Hardwood Forest Soil	MRRIRRSDRHRAQAPSKHKVRTRDKIGELQEENRKLRELVAHLSKLALTRITEPAEPEQQLNNAES
Ga0307475_110843862	3300031754	Hardwood Forest Soil	MGRIRRSDRHRAQAPSKHKVRTRDKIGELREENRKLRELVAQLSKLALTRITES
Ga0307473_104455492	3300031820	Hardwood Forest Soil	MGRIRRSDRHRAQAPSKHKVGTRDKVGELLEENRKLRELVAHLSKLALTRITEPAEPEEQPANTES
Ga0310917_102704211	3300031833	Soil	ADSLWGSKSNGDRFMGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTES
Ga0306919_100167576	3300031879	Soil	MGRTQGSNRHRAQALPKVRIKTRNEIEELREENRQLRELVAHLSKLALERITETAEPREQSTVSQKITNP
Ga0306925_106805411	3300031890	Soil	MGRVLRSVRHRAQAPRKRKAKAQNEIEELREENRRLRELVAHLSKLALERVTEIAEPGEPPANEPCVGVEVL
Ga0307479_102620353	3300031962	Hardwood Forest Soil	MGHAQRSNRAQLLPKRKPSTRNEIQQLREENRQLRELVAHLSKLAIARIAKAAQSEEEQA
Ga0306922_118285681	3300032001	Soil	MGRVLRSVRHRAQAPRKRKAKAQNEIEELREENRRLRELVAHLSKLALERVTEIAEPGEPPANDPCVGVEVL
Ga0335081_101151824	3300032892	Soil	MGRIRRSNRHRAQAPKHKVKTRDKIGELREENRKLRELVAHLSKLALTRITESAEPEEQSANTES
Ga0310914_100237906	3300033289	Soil	MGRIRRSGRHRAQALSKHKVKTRDKIGELREENRKLRELVAHLSELALTRITESSEPEEQPANTES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences