Metagenome / Metatranscriptome Family F054531

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054531
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	57 residues
Representative Sequence	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGIS
Number of Associated Samples	93
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.56 %
% of genes near scaffold ends (potentially truncated)	64.03 %
% of genes from short scaffolds (< 2000 bps)	74.82 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.942 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.288 % of family members)
Environment Ontology (ENVO)	Unclassified (53.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.396 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 75.00% β-sheet: 0.00% Coil/Unstructured: 25.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF09954	DUF2188	21.58
PF13356	Arm-DNA-bind_3	7.91
PF03795	YCII	6.47
PF17172	GST_N_4	2.88
PF17171	GST_C_6	2.88
PF00589	Phage_integrase	2.16
PF01964	ThiC_Rad_SAM	1.44
PF03401	TctC	0.72
PF13410	GST_C_2	0.72
PF13667	ThiC-associated	0.72
PF00378	ECH_1	0.72
PF13852	DUF4197	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	6.47
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	1.44
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.94 %
Unclassified	root	N/A	28.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.94 %
Unclassified	root	N/A	28.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.94 %
Unclassified	root	N/A	28.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.19 %
Unclassified	root	N/A	28.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.47 %
Unclassified	root	N/A	28.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	38.85 %
Unclassified	root	N/A	28.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	25.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.06 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.99 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.19 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	5.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7.19 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	5.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1036814	Not Available	707	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1067432	Not Available	509	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1073435	Not Available	539	Open in IMG/M
3300000955\|JGI1027J12803_107915540	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300002917\|JGI25616J43925_10362969	Not Available	535	Open in IMG/M
3300004268\|Ga0066398_10147297	Not Available	588	Open in IMG/M
3300004633\|Ga0066395_10027387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2338	Open in IMG/M
3300005181\|Ga0066678_10951928	Not Available	559	Open in IMG/M
3300005332\|Ga0066388_100297976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2257	Open in IMG/M
3300005332\|Ga0066388_105151949	Not Available	664	Open in IMG/M
3300005332\|Ga0066388_106242339	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005363\|Ga0008090_10200436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	875	Open in IMG/M
3300005468\|Ga0070707_100441602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1262	Open in IMG/M
3300005518\|Ga0070699_100186790	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300005713\|Ga0066905_100954816	Not Available	753	Open in IMG/M
3300005764\|Ga0066903_100428027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2196	Open in IMG/M
3300005764\|Ga0066903_102604002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	980	Open in IMG/M
3300005764\|Ga0066903_102872451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300005764\|Ga0066903_103668142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300005764\|Ga0066903_106553103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	606	Open in IMG/M
3300005764\|Ga0066903_108152841	Not Available	536	Open in IMG/M
3300005764\|Ga0066903_108420109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	526	Open in IMG/M
3300005937\|Ga0081455_10617631	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009090\|Ga0099827_10175112	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300009137\|Ga0066709_104342755	Not Available	517	Open in IMG/M
3300009792\|Ga0126374_10046838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2164	Open in IMG/M
3300009792\|Ga0126374_10830382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	709	Open in IMG/M
3300009792\|Ga0126374_10913081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300010043\|Ga0126380_10297974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1145	Open in IMG/M
3300010043\|Ga0126380_12252722	Not Available	505	Open in IMG/M
3300010046\|Ga0126384_10436443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300010046\|Ga0126384_10601481	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300010047\|Ga0126382_12459042	Not Available	507	Open in IMG/M
3300010048\|Ga0126373_10135179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2325	Open in IMG/M
3300010358\|Ga0126370_10766048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300010359\|Ga0126376_10680083	Not Available	987	Open in IMG/M
3300010359\|Ga0126376_11788752	Not Available	652	Open in IMG/M
3300010360\|Ga0126372_12794906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	540	Open in IMG/M
3300010362\|Ga0126377_13425891	Not Available	513	Open in IMG/M
3300010366\|Ga0126379_10436344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1367	Open in IMG/M
3300010366\|Ga0126379_10723501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1090	Open in IMG/M
3300010366\|Ga0126379_11376899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300010366\|Ga0126379_11888047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300010366\|Ga0126379_12353933	Not Available	632	Open in IMG/M
3300010376\|Ga0126381_102589186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300010398\|Ga0126383_10088900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2723	Open in IMG/M
3300010398\|Ga0126383_11521863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	759	Open in IMG/M
3300010398\|Ga0126383_11525553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300010398\|Ga0126383_13247445	Not Available	531	Open in IMG/M
3300010868\|Ga0124844_1021023	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300012211\|Ga0137377_10181915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2018	Open in IMG/M
3300012948\|Ga0126375_12113008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300012971\|Ga0126369_10596024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300012971\|Ga0126369_11540033	Not Available	755	Open in IMG/M
3300015374\|Ga0132255_101957180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	892	Open in IMG/M
3300016270\|Ga0182036_11882618	Not Available	507	Open in IMG/M
3300016319\|Ga0182033_11224074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	673	Open in IMG/M
3300016341\|Ga0182035_10920377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300016341\|Ga0182035_11906153	Not Available	539	Open in IMG/M
3300016404\|Ga0182037_10002957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9158	Open in IMG/M
3300021560\|Ga0126371_10464503	Not Available	1412	Open in IMG/M
3300021560\|Ga0126371_10686361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1172	Open in IMG/M
3300021560\|Ga0126371_10821980	Not Available	1075	Open in IMG/M
3300021560\|Ga0126371_11742295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300025910\|Ga0207684_10030611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4581	Open in IMG/M
3300027654\|Ga0209799_1015787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1640	Open in IMG/M
3300027654\|Ga0209799_1054008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300031543\|Ga0318516_10003809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6571	Open in IMG/M
3300031544\|Ga0318534_10030470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2939	Open in IMG/M
3300031546\|Ga0318538_10013061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3515	Open in IMG/M
3300031549\|Ga0318571_10185767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300031561\|Ga0318528_10022848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3010	Open in IMG/M
3300031561\|Ga0318528_10136442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1302	Open in IMG/M
3300031572\|Ga0318515_10164344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1185	Open in IMG/M
3300031573\|Ga0310915_10237669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1280	Open in IMG/M
3300031640\|Ga0318555_10157657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1216	Open in IMG/M
3300031680\|Ga0318574_10241478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300031681\|Ga0318572_10228871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1090	Open in IMG/M
3300031682\|Ga0318560_10067999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1792	Open in IMG/M
3300031682\|Ga0318560_10130734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1319	Open in IMG/M
3300031719\|Ga0306917_10737829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	773	Open in IMG/M
3300031719\|Ga0306917_11202939	Not Available	588	Open in IMG/M
3300031719\|Ga0306917_11569556	Not Available	505	Open in IMG/M
3300031724\|Ga0318500_10003403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4809	Open in IMG/M
3300031724\|Ga0318500_10158109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1069	Open in IMG/M
3300031724\|Ga0318500_10168719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300031744\|Ga0306918_10730809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	774	Open in IMG/M
3300031744\|Ga0306918_11349644	Not Available	547	Open in IMG/M
3300031751\|Ga0318494_10544428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300031765\|Ga0318554_10157451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1290	Open in IMG/M
3300031768\|Ga0318509_10079556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1735	Open in IMG/M
3300031771\|Ga0318546_10075794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2159	Open in IMG/M
3300031771\|Ga0318546_10582704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	786	Open in IMG/M
3300031779\|Ga0318566_10364783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	712	Open in IMG/M
3300031780\|Ga0318508_1219027	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031781\|Ga0318547_10069342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1949	Open in IMG/M
3300031781\|Ga0318547_10078020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1850	Open in IMG/M
3300031781\|Ga0318547_10597928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	684	Open in IMG/M
3300031782\|Ga0318552_10298142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300031792\|Ga0318529_10016273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2888	Open in IMG/M
3300031795\|Ga0318557_10006207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4151	Open in IMG/M
3300031798\|Ga0318523_10190260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300031821\|Ga0318567_10285197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	930	Open in IMG/M
3300031832\|Ga0318499_10336042	Not Available	581	Open in IMG/M
3300031833\|Ga0310917_10297319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1091	Open in IMG/M
3300031835\|Ga0318517_10014420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2922	Open in IMG/M
3300031845\|Ga0318511_10139834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300031859\|Ga0318527_10199954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300031860\|Ga0318495_10016724	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300031879\|Ga0306919_10005132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6915	Open in IMG/M
3300031879\|Ga0306919_10312625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1194	Open in IMG/M
3300031879\|Ga0306919_11245185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	564	Open in IMG/M
3300031880\|Ga0318544_10002214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5506	Open in IMG/M
3300031897\|Ga0318520_10322142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300031910\|Ga0306923_11235694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300031912\|Ga0306921_12417951	Not Available	547	Open in IMG/M
3300031942\|Ga0310916_10508832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300031945\|Ga0310913_10972358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300031947\|Ga0310909_10119602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2137	Open in IMG/M
3300031954\|Ga0306926_10257840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2160	Open in IMG/M
3300031954\|Ga0306926_12347329	Not Available	589	Open in IMG/M
3300032039\|Ga0318559_10032851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2086	Open in IMG/M
3300032039\|Ga0318559_10100525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1280	Open in IMG/M
3300032042\|Ga0318545_10161570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300032043\|Ga0318556_10021221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2908	Open in IMG/M
3300032044\|Ga0318558_10013151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3181	Open in IMG/M
3300032054\|Ga0318570_10388341	Not Available	636	Open in IMG/M
3300032089\|Ga0318525_10039138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2331	Open in IMG/M
3300032094\|Ga0318540_10285508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300033289\|Ga0310914_11622888	Not Available	550	Open in IMG/M
3300033290\|Ga0318519_10627110	Not Available	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.56%
Host-Associated	Host-Associated	1.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.56%
Plants	Host-Associated → Plants	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.17%
Loam	Environmental → Terrestrial → Soil → Loam	14.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.16%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10368142	3300000579	Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGNSSHKR*
AP72_2010_repI_A100DRAFT_10674322	3300000837	Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIGSMLMSD
AP72_2010_repI_A001DRAFT_10734352	3300000893	Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIG
JGI1027J12803_1079155401	3300000955	Soil	RNMPGRRHPMRVLAWLLATACAAHAGEATEAASGTTDQFKLLIGSVLMSDYIFRGISSHKR*
JGI25616J43925_103629692	3300002917	Grasslands Soil	MRVLAWLLATTCAAHAGEATEAASTTPDQFKLLIGSVLVSDYIFRGIS
Ga0066398_101472971	3300004268	Tropical Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGSSSHKR*
Ga0066395_100273873	3300004633	Tropical Forest Soil	MAGRWHPTRVLAWLLATAYAAHAGEATQAASATADQFKLMIGSMLMSDYIYRGSSSHKR*
Ga0066678_109519281	3300005181	Soil	MRVLAWLLATACAAHAGEATEAASGTTDQFKLLIGSVLMSDYIFRGISSHKR*
Ga0066388_1002979762	3300005332	Tropical Forest Soil	MKLAMLRLAPHLTRVLAWLVATACVAHAGEATQAPTGADQFKLMIGSMLMTDYIYRGSS*
Ga0066388_1051519491	3300005332	Tropical Forest Soil	MKLAMLRLAPHLMRVLAWLLATACAAHAGEATESASGTADQFKLMIGSMLMTDYIYRGIS
Ga0066388_1062423391	3300005332	Tropical Forest Soil	MRVLAWLLATACAAHAGEATEAASTTTDQFKLLIGSVLMSDYIFRG
Ga0008090_102004362	3300005363	Tropical Rainforest Soil	MLRLAPRPTRVLAWLLASACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQPSVAT*
Ga0070707_1004416022	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPGRRHPMRVLAWLLATACAAHAGEATEAASGTTDQFKLLIGSVLMSDYIFRGISSHKR*
Ga0070699_1001867904	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVGRRHPMRVLAWLLASACAAHAGEATEAASTTTDQFKLTIGSVLMSDYIFRGSSSHKR*
Ga0066905_1000610364	3300005713	Tropical Forest Soil	LATACAAHAGEATEAASGAADQSKLMIGSVLMTDYIYRGISSHKR*
Ga0066905_1009548162	3300005713	Tropical Forest Soil	MLRLAPHPTRVLAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIYRE*
Ga0066903_1004280271	3300005764	Tropical Forest Soil	MVGRRHPMRVLAWLLATACAAHAGEATDAASATPDQFKLLIGSVLMSDYIFRGNSSHKR*
Ga0066903_1026040021	3300005764	Tropical Forest Soil	MKLAMLRLAPHLTRVLAWLVATACVAHAGEATQAPTGADQFKLMIGSMLMTDYIYRGSSSHKR*
Ga0066903_1028724511	3300005764	Tropical Forest Soil	LATACAAHGGEATEAASATTDQFKLLIGSVLMSDYIFRGSSSHKR*
Ga0066903_1036681422	3300005764	Tropical Forest Soil	MKPAMPRLAPRPTHVLAWLLAMACGAHAGEATDAASAAADQFKLMVGSALMTDYIYRGLSYSAH
Ga0066903_1065531031	3300005764	Tropical Forest Soil	MRVLAWLLATACAAHGGEATEAASATTDQFKLLIGSVLMSDYIFRG
Ga0066903_1081528411	3300005764	Tropical Forest Soil	MLRLAPRPTRVLAWLVATACAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGI
Ga0066903_1084201092	3300005764	Tropical Forest Soil	MKPAMLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYRGLSYSAHQPS
Ga0081455_106176311	3300005937	Tabebuia Heterophylla Rhizosphere	MKLAMLRLAPHLTRTLVWLVATACAAHAGEATEAASGTADQFKLMIGSMLM
Ga0099827_101751123	3300009090	Vadose Zone Soil	MHVLAWLLATACAAHAGEATEAASGTTDQFKLTIGSVLMSDYIFRGISSHKR*
Ga0066709_1043427551	3300009137	Grasslands Soil	MRVLAWLLATACAAHAGEATEAASGTTDQFKLLIGSVLMSDYI
Ga0126374_100468384	3300009792	Tropical Forest Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYRGHSSHKR
Ga0126374_108303821	3300009792	Tropical Forest Soil	MKLAMLRLAPHLTRVLAWLVATACVAHAGEATQAPTGADQFKLMIGSMLMTDYIYRGISWHKR*
Ga0126374_109130812	3300009792	Tropical Forest Soil	MAGRWHPTRVLAWLLATAYAAHAGEATQAASATADQFKLMIGSMLMSDYIYRGSSSSHKR
Ga0126380_102979743	3300010043	Tropical Forest Soil	MKLAMPRLVPHLTRVLAWLVATACVAHAGEATESASGTADQFKLMIGSMLMTDYIYRGISWHKR*
Ga0126380_122527221	3300010043	Tropical Forest Soil	MKLAMLRLAPHLTRVFAWLVATACAAHAGEATEAASGTADQFKLMIGS
Ga0126384_104364432	3300010046	Tropical Forest Soil	MLRLAPHPTRILAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIY
Ga0126384_106014812	3300010046	Tropical Forest Soil	MKLAMLRLVPHLTRVLAWLVATACVAHAGDATESASGAADQFKLMIGSMLMTDYIYRGISWHKR*
Ga0126382_124590421	3300010047	Tropical Forest Soil	MKLAMLRLPPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMTDYIYRGISYS
Ga0126373_101351793	3300010048	Tropical Forest Soil	MAGRWHPTRVLAWLLATACAAHAGETTEPASATADQFKLVIGSMLMSDYIYRGSSSHKR*
Ga0126370_107660481	3300010358	Tropical Forest Soil	MLRLAPHPTRILAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIYRGSS*
Ga0126376_106800832	3300010359	Tropical Forest Soil	MKLAMLRLAPHLTRVLAWLVATACVAHAGEATQAPTGADQFKLMIVSMLMTDYIYRGSS*
Ga0126376_117887522	3300010359	Tropical Forest Soil	ILAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIYRGSSSHKR*
Ga0126372_127949061	3300010360	Tropical Forest Soil	MLRLAPRPTHVLAWLLGTAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYRGLSYSAHQPSVGT
Ga0126377_134258911	3300010362	Tropical Forest Soil	MKLAMLRLVPHLTRVLAWLVATACVAHAGEATESASGTADQFKLMIGSMLM
Ga0126379_104363442	3300010366	Tropical Forest Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYRGRSSHKR
Ga0126379_107235012	3300010366	Tropical Forest Soil	MRVLAWLLATASAAHAGEATEAASATTDQFKLLIGSVLMSDYIFRGNSSHKR*
Ga0126379_113768992	3300010366	Tropical Forest Soil	MLRLAPHPTRILAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIYRGISYSAH
Ga0126379_118880471	3300010366	Tropical Forest Soil	MLRLAPHPTRVLAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSD
Ga0126379_123539332	3300010366	Tropical Forest Soil	MKLAMPRLVPHLTRVLAWLVATACVAHAGEATESASGTADQFKLMIGSMLMTDYIYRGGISWHKR*
Ga0126381_1012609231	3300010376	Tropical Forest Soil	LVATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGNSSHKR*
Ga0126381_1025891861	3300010376	Tropical Forest Soil	MLRLAPHPTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYI
Ga0126383_100889005	3300010398	Tropical Forest Soil	MLRLAPHPTRVLAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDFIYRGSSHKR*
Ga0126383_115218632	3300010398	Tropical Forest Soil	MAGRWHPTRVFAWLLATAYAAHAGEATQAASATADQFKLMIGSMLMSDYIYRGSSSHKR*
Ga0126383_115255532	3300010398	Tropical Forest Soil	MKPAMLRLAPRPTHVLAWLLATACAAHAGEATEAASG
Ga0126383_132474451	3300010398	Tropical Forest Soil	MKPAMPRLAPRPTHVLAWLLATASAAHAGEATEAASGTADQFKLMIGSLLM
Ga0124844_10210231	3300010868	Tropical Forest Soil	MAGRWHPTRVLAWLLATAYAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGSSSHKR*
Ga0137377_101819153	3300012211	Vadose Zone Soil	MVGRRHPMRVLAWLLATACAAHAGEATEAASATTDQFKLLIGSVLMSDYIFRGISSHKR*
Ga0126375_121130082	3300012948	Tropical Forest Soil	RLVPHLTRVLAWLVATACVAHAGDATESASGAADQFKLMIGSMLMTDYIYRGISWHKR*
Ga0126369_105960243	3300012971	Tropical Forest Soil	MLRLAPRPTRVLAWLLASACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRG
Ga0126369_115400332	3300012971	Tropical Forest Soil	MLRLAPRPTHVLAWLLGTAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYRGRSSHKR
Ga0132255_1019571802	3300015374	Arabidopsis Rhizosphere	MRVLAWLLATACAAHAGEATEAASATTDQFKLLIGSVLMSDYIFRGISSHKR*
Ga0182036_118826181	3300016270	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIY
Ga0182033_104481131	3300016319	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVATYID
Ga0182033_112240741	3300016319	Soil	MKLAMLRLAAHLTRVLAWLLTTACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQPS
Ga0182033_119012592	3300016319	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQPSV
Ga0182035_109203772	3300016341	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSV
Ga0182035_119061531	3300016341	Soil	MKLAMLRLAAHLTRVLAWLLTTACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGIS
Ga0182037_1000295710	3300016404	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYPRA
Ga0126371_104645032	3300021560	Tropical Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGNSSHKR
Ga0126371_106863611	3300021560	Tropical Forest Soil	MLRLAPHPTRILAWLLATACAAHAGETTEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQPSV
Ga0126371_108219801	3300021560	Tropical Forest Soil	MKPAMLRLAPRPTRVLAWLLATACAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGSSSHKR
Ga0126371_117422952	3300021560	Tropical Forest Soil	MLRLAPHPTRVHAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRG
Ga0207684_100306115	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLAWLLATACAAHAGEATEAASGTTDQFKLLIGSVLMSDYIFRGISSHKR
Ga0257159_10895502	3300026494	Soil	MLPLAVHPTRVLACLLATACAAHAGEATDATATAADQSKLTTGAVLMSDYIYRGISYSARQPVVGAY
Ga0209799_10157872	3300027654	Tropical Forest Soil	MKLAMLRLAPHLTRILAWLVATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGSSSHKR
Ga0209799_10540082	3300027654	Tropical Forest Soil	MKPAMLRLAPRPTHVLAWLLATACAAHAGEATEAASGTADQFKL
Ga0318516_100038096	3300031543	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRGPSSHKR
Ga0318534_100304705	3300031544	Soil	MKLAMLRLAAHLTRVLAWLLTTACAAHAGEATEAASGTADQFKLMIGSMLMSDY
Ga0318538_100045978	3300031546	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVATYI
Ga0318538_100130616	3300031546	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRGLSY
Ga0318571_101857671	3300031549	Soil	VRTATKRAMLRLAPHPTRVLAWLLATACASHAGEATEAASGTADQFKLTIGSVLMSDYI
Ga0318528_100228486	3300031561	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRG
Ga0318528_101364421	3300031561	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAH
Ga0318515_101643441	3300031572	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLM
Ga0310915_102376691	3300031573	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVAT
Ga0318555_101576573	3300031640	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSCLGH
Ga0318574_102414782	3300031680	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVATY
Ga0318572_102288711	3300031681	Soil	MAGRWHPTRVLGWLLATACVAHAGEAKEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQ
Ga0318560_100679993	3300031682	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYREIS
Ga0318560_101307343	3300031682	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVATY
Ga0306917_107378291	3300031719	Soil	MRVLAWLLATACAAHAGEATEAASATTDQFKLTIGSVLMSDYIFRGNSSHKR
Ga0306917_112029392	3300031719	Soil	MPRLVPRPTHVLAWLLATACAAHAGEATDTASAAADQFKLMV
Ga0306917_115695562	3300031719	Soil	MKLAMLRLAAHLTRVLAWLLTTACAAHAGEATEAASGTADQFKLMIGSMLM
Ga0318500_100034031	3300031724	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYLGIS
Ga0318500_101581093	3300031724	Soil	MAGRWHPTRVLGWLLATACVAHAGEAKEAASGTADQFKLMIGSMLMSDYIYRGSSSHK
Ga0318500_101687191	3300031724	Soil	VRTATKRAMLRLAPHPTRVLAWLLATACASHAGEATEAASGTADQFKLTIGSVLMSDYIF
Ga0306918_107308092	3300031744	Soil	MVARRHPMRVLAWLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGNSSHKR
Ga0306918_113496441	3300031744	Soil	MPRLVPRPTHVLAWLLATACAAHAGEATDTASAAADQFKLMVGSALMTDYIYRGRSSHKRSRAVGKRQSACLPSIF
Ga0318494_105444282	3300031751	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRG
Ga0318554_101574513	3300031765	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISY
Ga0318509_100795561	3300031768	Soil	MKLAMLRLAAHLTRVLAWLLTTACAAHAGEATEAASGTADQFKLMIG
Ga0318546_100757941	3300031771	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFK
Ga0318546_105827041	3300031771	Soil	MVARRHPMRVLAWLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGISYSA
Ga0318566_103647831	3300031779	Soil	MRVLAWLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGNSSHKR
Ga0318508_12190271	3300031780	Soil	MASRWHPTRVLAWLLATACAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGISYSAHQ
Ga0318547_100693425	3300031781	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDY
Ga0318547_100780201	3300031781	Soil	MAGRWHPTRVLGWLLATACVAHAGEAKEAASGTADQFKLMIGSMLMSDYIYRGSSSHKR
Ga0318547_105979282	3300031781	Soil	MRVLAWLLATACAAHAGEATEAASATTDQFKLTIGSVLMSD
Ga0318552_102981422	3300031782	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQP
Ga0318529_100162735	3300031792	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSV
Ga0318557_100062071	3300031795	Soil	MAGRWHPTRVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGSRQDHP
Ga0318523_101902603	3300031798	Soil	MAGRWHPTRVLGWLLATACVAHAGEAKEAASGTADQFKLMIGSMLMSDYIYRGISYSAH
Ga0318567_102851973	3300031821	Soil	MRVLAWLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGIS
Ga0318499_103360422	3300031832	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDY
Ga0310917_102973193	3300031833	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQP
Ga0318517_100144201	3300031835	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRGHS
Ga0318511_101398341	3300031845	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSM
Ga0318527_101999541	3300031859	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGI
Ga0318495_100167245	3300031860	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISY
Ga0306919_100051321	3300031879	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQP
Ga0306919_103126251	3300031879	Soil	MRVLAWLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGNSS
Ga0306919_112451851	3300031879	Soil	MRVLAWLLATACAAHAGEATEAASATTDQFKLTIGSVLMSDYIFRGISYSAHQPA
Ga0318544_100022148	3300031880	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPS
Ga0318520_103221421	3300031897	Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSELMTDYIYRGRSSHKR
Ga0306923_112356943	3300031910	Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSALMTDY
Ga0306921_124179511	3300031912	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGSSSHKR
Ga0310916_105088321	3300031942	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAH
Ga0310913_100176901	3300031945	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPSVATYID
Ga0310913_109723581	3300031945	Soil	WLLATACAAHAGEATEAASATADQFKLTIGSVLMSDYIFRGNSSHKR
Ga0310909_101196021	3300031947	Soil	MTLAMLRLAPHLTRVLAWLLATACAAHAGEATEAASGTADQFKLMIGSMLMSDYIYRGISYSAHQ
Ga0306926_102578404	3300031954	Soil	MRVLAWLLATACAAHAGEATEAASATTDQFKLTIGSVLMSDYIF
Ga0306926_123473292	3300031954	Soil	MLRLASRPTPVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSALMTDYIYR
Ga0318559_100328511	3300032039	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRGLSYSA
Ga0318559_101005251	3300032039	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRGISYSAHQPS
Ga0318545_101615702	3300032042	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSC
Ga0318556_100212211	3300032043	Soil	MASRWHPTRVLAWLLATACAAHAGEATEAASATADQFKLMIGSMLMSDYIYRGISY
Ga0318558_100131511	3300032044	Soil	MPRLAPRPTHVLAWLLATACAAHASEATDAASVAADQFKLMVGSLLMTGYIYRGLSYS
Ga0318570_103883412	3300032054	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYIYRGIS
Ga0318524_104969691	3300032067	Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSELMTDYIYRGLSYSAHQPSVGTYV
Ga0318525_100391381	3300032089	Soil	MLRLAPHPARVLAWLLATACAAHAGEATEAASGAPDQFKLMIGSMLMSDYI
Ga0318540_102855082	3300032094	Soil	MLRLAPRPTRVLAWLLATACAAHAGEATKAASGAPDQFKLMIGSMLMSDYIYRG
Ga0310914_116228881	3300033289	Soil	MPRLVPRPTHVLAWLLATACAAHAGEATDTASAAADQFKLMVGSALMTDYIYRGRSSHKRSRA
Ga0318519_106271101	3300033290	Soil	MLRLAPRPTHVLAWLLATAYAAHAGEATDAASAAADQFKLMVGSELMTDDIYRGLSYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054531

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences