Metagenome / Metatranscriptome Family F054630

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054630
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	87 residues
Representative Sequence	VNRTDIYRLAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERHQLELAV
Number of Associated Samples	89
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.47 %
% of genes near scaffold ends (potentially truncated)	25.90 %
% of genes from short scaffolds (< 2000 bps)	92.81 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.662 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.093 % of family members)
Environment Ontology (ENVO)	Unclassified (30.935 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.014 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.89% β-sheet: 19.64% Coil/Unstructured: 54.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF07883	Cupin_2	7.91
PF00072	Response_reg	2.88
PF03144	GTP_EFTU_D2	2.16
PF06823	DUF1236	1.44
PF09650	PHA_gran_rgn	1.44
PF03695	UPF0149	1.44
PF13586	DDE_Tnp_1_2	0.72
PF12850	Metallophos_2	0.72
PF13391	HNH_2	0.72
PF02705	K_trans	0.72
PF13426	PAS_9	0.72
PF04986	Y2_Tnp	0.72
PF04828	GFA	0.72
PF01527	HTH_Tnp_1	0.72
PF01425	Amidase	0.72
PF01019	G_glu_transpept	0.72
PF13936	HTH_38	0.72
PF02518	HATPase_c	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	1.44
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.72
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.72
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
All Organisms	root	All Organisms	27.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
cellular organisms	root	All Organisms → cellular organisms	27.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.16 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %
Thermodesulfobacteria	phylum	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.72 %
Thermodesulfobacteria	class	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.32 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.32 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Thermodesulfobacteriales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.72 %
unclassified Thermodesulfobacteriales	no rank	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales	0.72 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.32 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Thermodesulfobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales → Thermodesulfobacteriales bacterium	0.72 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.72 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.32 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Thermodesulfobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales → Thermodesulfobacteriales bacterium	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.32 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.72 %
Bradyrhizobium sp. A19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. A19	0.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Thermodesulfobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales → Thermodesulfobacteriales bacterium	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002G1RQ4	Not Available	514	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10129341	Not Available	526	Open in IMG/M
3300002245\|JGIcombinedJ26739_101126179	Not Available	672	Open in IMG/M
3300003505\|JGIcombinedJ51221_10021174	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300003505\|JGIcombinedJ51221_10067397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1390	Open in IMG/M
3300003505\|JGIcombinedJ51221_10348471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	602	Open in IMG/M
3300003505\|JGIcombinedJ51221_10363400	Not Available	588	Open in IMG/M
3300003505\|JGIcombinedJ51221_10474315	Not Available	505	Open in IMG/M
3300005363\|Ga0008090_15535177	Not Available	647	Open in IMG/M
3300005764\|Ga0066903_100982454	Not Available	1540	Open in IMG/M
3300005764\|Ga0066903_104535893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	740	Open in IMG/M
3300005764\|Ga0066903_106431268	Not Available	613	Open in IMG/M
3300005764\|Ga0066903_107701302	Not Available	554	Open in IMG/M
3300006059\|Ga0075017_101560753	Not Available	521	Open in IMG/M
3300006893\|Ga0073928_10746675	Not Available	680	Open in IMG/M
3300006904\|Ga0075424_101540330	Not Available	705	Open in IMG/M
3300007982\|Ga0102924_1182464	Not Available	929	Open in IMG/M
3300007982\|Ga0102924_1216564	Not Available	817	Open in IMG/M
3300009522\|Ga0116218_1442576	Not Available	579	Open in IMG/M
3300009698\|Ga0116216_10713979	Not Available	602	Open in IMG/M
3300009700\|Ga0116217_10687094	Not Available	634	Open in IMG/M
3300010043\|Ga0126380_11403874	Not Available	613	Open in IMG/M
3300010046\|Ga0126384_10844909	Not Available	823	Open in IMG/M
3300010046\|Ga0126384_11326508	Not Available	668	Open in IMG/M
3300010047\|Ga0126382_12102891	Not Available	540	Open in IMG/M
3300010048\|Ga0126373_12883824	Not Available	536	Open in IMG/M
3300010358\|Ga0126370_10514066	Not Available	1015	Open in IMG/M
3300010361\|Ga0126378_12550941	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_11249605	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300010371\|Ga0134125_12355296	Not Available	579	Open in IMG/M
3300010375\|Ga0105239_13402132	Not Available	517	Open in IMG/M
3300010376\|Ga0126381_100656415	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300010376\|Ga0126381_100878703	Not Available	1290	Open in IMG/M
3300010376\|Ga0126381_103620515	Not Available	605	Open in IMG/M
3300010379\|Ga0136449_100360418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2606	Open in IMG/M
3300010379\|Ga0136449_100624980	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300010379\|Ga0136449_101828190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300010379\|Ga0136449_103130827	Not Available	641	Open in IMG/M
3300010398\|Ga0126383_10932537	Not Available	955	Open in IMG/M
3300010401\|Ga0134121_12164039	Not Available	592	Open in IMG/M
3300010403\|Ga0134123_13119991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	532	Open in IMG/M
3300012957\|Ga0164303_10488842	Not Available	785	Open in IMG/M
3300012957\|Ga0164303_10531629	Not Available	759	Open in IMG/M
3300012960\|Ga0164301_10094735	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300012961\|Ga0164302_11352387	Not Available	579	Open in IMG/M
3300012985\|Ga0164308_10584856	Not Available	947	Open in IMG/M
3300012989\|Ga0164305_10902242	Not Available	743	Open in IMG/M
3300016270\|Ga0182036_10320448	Not Available	1185	Open in IMG/M
3300016270\|Ga0182036_10712381	Not Available	813	Open in IMG/M
3300016294\|Ga0182041_11142977	Not Available	708	Open in IMG/M
3300016319\|Ga0182033_10542397	Not Available	1004	Open in IMG/M
3300016319\|Ga0182033_10970891	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300016357\|Ga0182032_10439676	Not Available	1062	Open in IMG/M
3300016371\|Ga0182034_10457775	Not Available	1057	Open in IMG/M
3300016387\|Ga0182040_10143982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300016387\|Ga0182040_10359744	Not Available	1131	Open in IMG/M
3300016387\|Ga0182040_10443559	Not Available	1027	Open in IMG/M
3300016445\|Ga0182038_10060859	Not Available	2573	Open in IMG/M
3300016445\|Ga0182038_10408121	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300017932\|Ga0187814_10391102	Not Available	541	Open in IMG/M
3300017943\|Ga0187819_10178360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1259	Open in IMG/M
3300017955\|Ga0187817_10804639	Not Available	600	Open in IMG/M
3300017995\|Ga0187816_10425970	Not Available	592	Open in IMG/M
3300018006\|Ga0187804_10212890	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → unclassified Thermodesulfobacteriales → Thermodesulfobacteriales bacterium	828	Open in IMG/M
3300020579\|Ga0210407_10051393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3078	Open in IMG/M
3300020579\|Ga0210407_10547158	Not Available	904	Open in IMG/M
3300020580\|Ga0210403_10418733	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300020581\|Ga0210399_10603656	Not Available	908	Open in IMG/M
3300020583\|Ga0210401_10018221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6773	Open in IMG/M
3300020583\|Ga0210401_10305133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1453	Open in IMG/M
3300020583\|Ga0210401_10487144	Not Available	1096	Open in IMG/M
3300020583\|Ga0210401_10816466	Not Available	792	Open in IMG/M
3300020583\|Ga0210401_11411756	Not Available	554	Open in IMG/M
3300021168\|Ga0210406_10153837	Not Available	1930	Open in IMG/M
3300021171\|Ga0210405_10252379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1396	Open in IMG/M
3300021171\|Ga0210405_10478757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300021178\|Ga0210408_10264884	Not Available	1370	Open in IMG/M
3300021178\|Ga0210408_11437296	Not Available	518	Open in IMG/M
3300021180\|Ga0210396_10401000	Not Available	1206	Open in IMG/M
3300021180\|Ga0210396_10882606	Not Available	763	Open in IMG/M
3300021180\|Ga0210396_11752200	Not Available	503	Open in IMG/M
3300021401\|Ga0210393_10434588	Not Available	1071	Open in IMG/M
3300021401\|Ga0210393_11256173	Not Available	595	Open in IMG/M
3300021403\|Ga0210397_10548739	Not Available	879	Open in IMG/M
3300021403\|Ga0210397_11208490	Not Available	588	Open in IMG/M
3300021404\|Ga0210389_11343791	Not Available	547	Open in IMG/M
3300021405\|Ga0210387_10925931	Not Available	766	Open in IMG/M
3300021405\|Ga0210387_11014558	Not Available	727	Open in IMG/M
3300021406\|Ga0210386_10317184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1338	Open in IMG/M
3300021406\|Ga0210386_10858933	Not Available	778	Open in IMG/M
3300021406\|Ga0210386_11377375	Not Available	592	Open in IMG/M
3300021420\|Ga0210394_10469248	Not Available	1108	Open in IMG/M
3300021420\|Ga0210394_10961580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	741	Open in IMG/M
3300021433\|Ga0210391_11062119	Not Available	630	Open in IMG/M
3300021474\|Ga0210390_10099841	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300021474\|Ga0210390_10712076	Not Available	836	Open in IMG/M
3300021475\|Ga0210392_11311132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. A19	542	Open in IMG/M
3300021478\|Ga0210402_11445592	Not Available	615	Open in IMG/M
3300021478\|Ga0210402_11743844	Not Available	549	Open in IMG/M
3300021559\|Ga0210409_10977969	Not Available	721	Open in IMG/M
3300021560\|Ga0126371_13511642	Not Available	529	Open in IMG/M
3300022557\|Ga0212123_10626522	Not Available	674	Open in IMG/M
3300027895\|Ga0209624_10233143	Not Available	1223	Open in IMG/M
3300027908\|Ga0209006_10299592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300027908\|Ga0209006_10941106	Not Available	691	Open in IMG/M
3300028047\|Ga0209526_10140975	All Organisms → cellular organisms → Bacteria → Nitrospirae	1690	Open in IMG/M
3300028047\|Ga0209526_10346822	Not Available	995	Open in IMG/M
3300028047\|Ga0209526_10553034	Not Available	743	Open in IMG/M
3300029636\|Ga0222749_10372381	Not Available	752	Open in IMG/M
3300031231\|Ga0170824_125645524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1277	Open in IMG/M
3300031545\|Ga0318541_10197536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300031573\|Ga0310915_10438076	Not Available	929	Open in IMG/M
3300031708\|Ga0310686_108832580	Not Available	579	Open in IMG/M
3300031708\|Ga0310686_118328562	Not Available	865	Open in IMG/M
3300031718\|Ga0307474_11103179	Not Available	628	Open in IMG/M
3300031718\|Ga0307474_11583706	Not Available	515	Open in IMG/M
3300031744\|Ga0306918_10728469	Not Available	776	Open in IMG/M
3300031754\|Ga0307475_10793749	Not Available	752	Open in IMG/M
3300031890\|Ga0306925_10241120	Not Available	1949	Open in IMG/M
3300031910\|Ga0306923_11449932	Not Available	721	Open in IMG/M
3300031912\|Ga0306921_10186597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2431	Open in IMG/M
3300031912\|Ga0306921_10971742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	960	Open in IMG/M
3300031942\|Ga0310916_10685439	Not Available	868	Open in IMG/M
3300031942\|Ga0310916_11564901	Not Available	536	Open in IMG/M
3300031946\|Ga0310910_10377647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1122	Open in IMG/M
3300031947\|Ga0310909_10278525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1400	Open in IMG/M
3300031954\|Ga0306926_10532104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1442	Open in IMG/M
3300031954\|Ga0306926_11481492	Not Available	784	Open in IMG/M
3300032001\|Ga0306922_12346311	Not Available	511	Open in IMG/M
3300032076\|Ga0306924_10702377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	1136	Open in IMG/M
3300032076\|Ga0306924_12446954	Not Available	525	Open in IMG/M
3300032160\|Ga0311301_10162093	All Organisms → cellular organisms → Bacteria → Proteobacteria	3990	Open in IMG/M
3300032160\|Ga0311301_12484121	Not Available	580	Open in IMG/M
3300032261\|Ga0306920_101502477	Not Available	962	Open in IMG/M
3300032261\|Ga0306920_102123885	Not Available	783	Open in IMG/M
3300033289\|Ga0310914_10849590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300033289\|Ga0310914_11666068	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.56%
Host-Associated	Host-Associated	1.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.37%
Aquatic	Environmental → Aquatic	7.19%
Plants	Host-Associated → Plants	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.37%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.44%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.86%
Loam	Environmental → Terrestrial → Soil → Loam	11.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.60%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_12329160	2170459003	Grass Soil	MNCTDKTSLPLRLWTIINDVLFALKLEIAVVNRTDIYRLAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRLELTV
AF_2010_repII_A001DRAFT_101293411	3300000793	Forest Soil	DIYRKAIKRTFASLYGVLPDAVDASWTSNDTIVVQCAGKTFIHLILSXPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
JGIcombinedJ26739_1011261791	3300002245	Forest Soil	VNRTDIYRRAIKRTFADLYGVSPDTVDVSWTTGKTIVVHCAGKPFIHPILSDPDDEAPEFTCLDEDPIIVNLTDEEWHQIESAV*
JGIcombinedJ51221_100211745	3300003505	Forest Soil	MTYFFALKLEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCVGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTV*
JGIcombinedJ51221_100673973	3300003505	Forest Soil	MNPTDIYRQAIKRTFANLYGVAPDAVDVRWTSGETIVVQCAGKTFTHLVLSDPNDDAPEFFSISEDPVVVMLSEDERNQLERAI*
JGIcombinedJ51221_103484711	3300003505	Forest Soil	VNRTDIYRRAIKRTFANLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDTPEFTCLDEXPVIVNLTDDEWHQLELAV*
JGIcombinedJ51221_103634001	3300003505	Forest Soil	VNRTDIYRQAIKRTFADLYGVSPDTVDVRWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLDEDPVIVNFTDDERHRLELAT*
JGIcombinedJ51221_104743152	3300003505	Forest Soil	MNSEASNHQRTLANLYGVSSETVDVSWTTGKTLVVQCAGKTFLHPILSDPDDDAPEFTCVDEDRVFVNLTDDERGQLGRAI*
Ga0008090_155351771	3300005363	Tropical Rainforest Soil	MKRIDIYRQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHIILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
Ga0066903_1009824542	3300005764	Tropical Forest Soil	VNRIDIYSQAIKRTFADLYGVLPDTVEVHWASDDTIIVDCANKRFIHLILSDPDDDAPEFLCPDEDPVVVNLTEDERNQLQHAI*
Ga0066903_1045358932	3300005764	Tropical Forest Soil	MSLSALELEIAFVDRTHIYRQAIKRTFANLYGVSPDAVQITWTTGRTIVVHYAGKTFLHPILSAPDDDAPELTCPEEDPVIVTLMDDERSQLESAAG*
Ga0066903_1064312681	3300005764	Tropical Forest Soil	MKRIDIYRQAIKRTFAALYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
Ga0066903_1077013021	3300005764	Tropical Forest Soil	NWPNVFDLKLEVAFVNRADIYRQAIKRTFANLYGVSPNTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIEGAI*
Ga0075017_1015607532	3300006059	Watersheds	VNRTDIYRLAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTADERSQLERAM*
Ga0073928_107466752	3300006893	Iron-Sulfur Acid Spring	VNRTDIYRQAIKRTFADLYGVSPDTVNVIWTEGKTIVVQCAGKTFLHLIVSDPDDHAPEFLCPEKDPVIVNLTDDERHQLELAV*
Ga0075424_1015403302	3300006904	Populus Rhizosphere	MNRTDIFSQAIKRTFADLYSVSPSTVDVTWTREDTMVVQCAGRKFIHLILSVPDGDAPEFLCPDEDPVIVNLTDDERHQLERAI*
Ga0102924_11824642	3300007982	Iron-Sulfur Acid Spring	MHEEVSQTFPALELEIAFVNRTDIYRRAIKRTFANLYGVSPDTVDVGWTIGKTIVVQCAGKTFLHPILSDPDDDAPQFTCPDEDPVIVNLTDDERSQLERAV*
Ga0102924_12165642	3300007982	Iron-Sulfur Acid Spring	MTYFFALKLEIAFVNRTDIYRRAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCASKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTV*
Ga0116218_14425762	3300009522	Peatlands Soil	VNRTDIYRRAIKRTFANLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDTPEFTCLDEDPVIVNLTDDEWHQLELAV*
Ga0116216_107139791	3300009698	Peatlands Soil	VEIAFVNRTDIYRQAIKRTFADLYGVSPDTVDVSWTTGKTIVGKRAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLELPV*
Ga0116217_106870941	3300009700	Peatlands Soil	VEIAFVNRTDIYRQAIKRTFADLYGVSPDTVDVSWTTGKTIFAQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLELP
Ga0126380_114038741	3300010043	Tropical Forest Soil	LEVAFVTRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESAIQ*
Ga0126384_108449092	3300010046	Tropical Forest Soil	LEIASVNRIDIYSQAIKRTFADLYGVLPGTVEVNWASDDTIVVDCANKRFIHLILSDPDDDAPEFLCPDEDPVVVNLTEDERNQLQRAI*
Ga0126384_113265082	3300010046	Tropical Forest Soil	MKRIDIYRQAIKRTFASLYGVLPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
Ga0126382_121028911	3300010047	Tropical Forest Soil	ARGHPQISGRDAGVDAFMNTTDIYRQAIKRTFAGLYGISPDSVDVTWTGAKTVVVQCAGKTFIHLILSDRDGDAPEFLSADEDPVIVNLTDEERHLLERAI*
Ga0126373_128838242	3300010048	Tropical Forest Soil	LEIAIVNRADIYRQAIKRIANLYSVSPDTVEVSWTAGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIECASHECG*
Ga0126370_105140663	3300010358	Tropical Forest Soil	LEVAFVNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGKTIVVECAGKTFLHPILSDPDNDAPQFTCLEEDLVVVNLTDDERSQIESASHECG*
Ga0126378_125509411	3300010361	Tropical Forest Soil	MKRIDIYRQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
Ga0126379_112496051	3300010366	Tropical Forest Soil	EKPFMKRIDIYHQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI*
Ga0134125_123552962	3300010371	Terrestrial Soil	VNRTDIYRQAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDTDDDAPEFTCLAEDPVIVNLTGDERSRLERAI*
Ga0105239_134021322	3300010375	Corn Rhizosphere	VNRAVIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQSAGKTFLHPILGDPDNDAPELTCLDEDPVIVTLVDDER
Ga0126381_1006564152	3300010376	Tropical Forest Soil	LEVAFVNRTDIYRQAIKRTFANLYGVSPNTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESAI*
Ga0126381_1008787032	3300010376	Tropical Forest Soil	LEIASVNRIDIYSQAIKRTFADLYGVLPDTVEVNWASDDTIVVDCANKRFIHLILSDPDDDAPEFLCPDEDPVVVNLTEDERNQLQHAI*
Ga0126381_1036205151	3300010376	Tropical Forest Soil	LEIAFVNQTDIYRQAIKRTFADLYGVSPDTVDVTWTSDNTIVVQCAGETFIHLILSDPDGDAPEFLCPDEDPVIVNLTTMNDTSLSARSDED*
Ga0136449_1003604184	3300010379	Peatlands Soil	VNRTDIYRRAIKRTFANLYGVSADTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDTPEFTCLDEDPVIVNLTDDEWHQLELAV*
Ga0136449_1006249801	3300010379	Peatlands Soil	VEIAFVNRTDIYRQAIKRTFADLYGVSPDTVDVSWTTGKTIVAQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLELPV*
Ga0136449_1018281902	3300010379	Peatlands Soil	LEIAFVNRTDIYRQAIKRTFADLYSVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDRPLFTCLDEDPVIVNLTDDERHQLEFAV*
Ga0136449_1031308271	3300010379	Peatlands Soil	VTRTDIYRQAIKRTFADVYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV*
Ga0126383_109325372	3300010398	Tropical Forest Soil	LEIASVNRIDIYSQAIKRTFADLYGVLPDTVEVNWASDDTIVVDCANKRFIHLILSDPDDDAPEFLCPDEDPVIVNLTG*
Ga0134121_121640391	3300010401	Terrestrial Soil	MYGVVNQPFPALELEITSVKRFDIYRQAIKHTFADLYGVAADTVEVSWASDDRIVVDCAGKRFNHFILTNSDDRVLEFLCPDEDPVVVNLTEDERNQLDRAT
Ga0134123_131199912	3300010403	Terrestrial Soil	QTSLALELEIAFVTRTDIYRQAIKRTFADLYGGSPDTVDISWTTGKTIVVQCAGKTFLHPIVSDPDDDAPEFTCLDEDPVIINLTADERHQLELAV*
Ga0137385_116445052	3300012359	Vadose Zone Soil	MHEEVSQTFPALELEIAFVNRTDIYRQAIKRTFANLYSVSTDTVDVGWTIGKTIVVQCAGKTFLHPILSDPDNDAPQFTCPDEDPSLS
Ga0164303_104888421	3300012957	Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVNLTDDERSQLEGAI*
Ga0164303_105316292	3300012957	Soil	VNRTDIYRRAIKRTFANLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDTPEFTCLDENPVIVNLTDDEWHQLELAV*
Ga0164301_100947353	3300012960	Soil	DIYRQAIKRTFADLYGVSPARVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV*
Ga0164302_113523872	3300012961	Soil	VTRIDIYRQAIKRTFVDLYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVNLTDDERSQLEGAI*
Ga0164308_105848563	3300012985	Soil	GNAFYSRIGIDFQGVSRMNPTDIYRQAIKRTFANLYGVAPDAVDVRWTSGETIVVQCAGKTFTHLVLSDPNDDAPEFFSISEDPVVVMLSEDERNQLERAI*
Ga0164305_109022421	3300012989	Soil	LEIAFVNRTDIYRQAIKRTFSNLYGVSPDTVDVSWSIGKTIIVQCAGKTFLHSILNDPDDDAPEFLCPDEDPVIVNLTTMNGTSLSARSDED*
Ga0182036_103204482	3300016270	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIEGAI
Ga0182036_107123812	3300016270	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTWTGAKTVVVQCAGKTFIHLILSDPDDDAPDFLSADEDPVIVNLTDKETSPGRTRYIG
Ga0182041_111429772	3300016294	Soil	MRRIDIYRQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIINLTSDERSQLESAI
Ga0182033_105423973	3300016319	Soil	TLSAKILTSQTFLAIKLETAFVNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDLVVVNLTDDERSEIER
Ga0182033_109708911	3300016319	Soil	RRIDIYRQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI
Ga0182032_104396762	3300016357	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVKCAGKTFLHPILSDPDNDAPQFTCVEEDPVVVNLMDDERSQIESAIQ
Ga0182034_104577752	3300016371	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSEIER
Ga0182040_101439823	3300016387	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTRTSAKTVVEQCAGKRFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0182040_103597442	3300016387	Soil	MKRIDIYHQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCLDEDPVIVNLTSDERSLLESAI
Ga0182040_104435592	3300016387	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVECAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIEGAI
Ga0182038_100608591	3300016445	Soil	MNTAAAYRRAIKRTFADLYGVSPDSVDVTRTSAKTVVQWAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERH
Ga0182038_104081211	3300016445	Soil	VNRTDIYRQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI
Ga0187814_103911022	3300017932	Freshwater Sediment	ALELEIAFVNRTDIYRRAIKRTFADLYGVSPDTVDVGWTTGKTIVVQCAGKTFLHPILSDPDEDAPQFTCLVEDSVIVNLTDDERSRLERPI
Ga0187819_101783602	3300017943	Freshwater Sediment	VINTRYEEASQTFLALELEIAFVNRTDIYRRAIKRTFADLYGVSPDTVDVGWTTGKTIVVQCAGKTFLHPILSDPDEDAPQFTCLVEDSVIVNLTDDERSRLERPI
Ga0187817_108046392	3300017955	Freshwater Sediment	VNRTDIYRRAIKRTFADLYGVSPDTVDVGWTTGKTIVVQCAGKTFLHPILSDPDEDAPQFTCLVEDSVIVNLTDDERSRLERPI
Ga0187816_104259701	3300017995	Freshwater Sediment	LEIVFVNRTDIYRQAIKRTFANLYSVSPDTVDVSWTTGKTIVVQCAGETFLHPILSDPDDDTPEFTCVVEDPVIVNLTDDERSQLERAI
Ga0187804_102128901	3300018006	Freshwater Sediment	VNRTDIYRLAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERHQLELAV
Ga0210407_100513934	3300020579	Soil	MNPTDIYRQAIKRTFANLYGVAPDAVDVRWTSGETIVVQCAGKTFTHLVLSDPNDDAPEFFSISEDPVVVMLSEDERNQLERAI
Ga0210407_105471581	3300020579	Soil	VNRAHIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLDLPV
Ga0210403_104187332	3300020580	Soil	MTYFFALKLEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCVGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRLELTV
Ga0210399_106036563	3300020581	Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVAQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVNLTDDERSQLEGAI
Ga0210401_1001822110	3300020583	Soil	MNPTDIYRQAIKRTFANLYGVAPDAVDVRWTSGETIVVQCAGKTFTHLVLSDPNDDAPEFFSISEDPVVVMLSEDERNQLERAIRDERR
Ga0210401_103051332	3300020583	Soil	VNQTDIYRQAIKRTFADLYGVSPGTMDVSWTPGKTIVVQCAGKTFPHPILSDPDDDAPEFTCLDEDPVIVNLTDDERRQRERAIQ
Ga0210401_104871442	3300020583	Soil	VNRTDIYRRAIKRTFADLYGVSPDTVDVSWTTGKTIVVHCAGKPFIHPILSDPDDEAPEFTCLDEDPIIVNLTDEEWHQIESAV
Ga0210401_108164662	3300020583	Soil	MNSEASNHQRTLANLYGVSSETVDVSWTTGKTLVVQCAGKTFLHPILSDPDDDAPEFTCVDEDRVFVNLTDDERGQLGRAI
Ga0210401_114117562	3300020583	Soil	VNQTDIYRQTIKRTFAELYGVSPDTVDVTWTSDNTIVVQCAGKTFIHLILSDPDDDAPEFLCPDEDPVIVNLTTMNGTS
Ga0210406_101538373	3300021168	Soil	MTYFFALKLEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCVGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTV
Ga0210405_101265283	3300021171	Soil	MRARFEEASQTFLTLKLEIALVNRTDIYCRAIKRTFANLYGVSTETVDVSWTTGKTIVVQCAGKTFLHPILSDPDDD
Ga0210405_102523792	3300021171	Soil	VNRTDIYRRAIKRTFANLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDTPEFTCLDENPVIVNLTDDEWHQLELAV
Ga0210405_104787572	3300021171	Soil	MTYFFALKLEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCVGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTA
Ga0210408_102648842	3300021178	Soil	VNQTDIYRQAIKRTLADLYGVSPDTVDVTWTSDNTIVLQCAGKTFIHLILSDPDDDAPEFLCPDEDPVIVNLTTMNGTSLSVRSDED
Ga0210408_114372962	3300021178	Soil	RTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDTDDDAPEFTCLAEDPVIVNLTGDERSRLERAI
Ga0210396_104010002	3300021180	Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKIIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVNLTDDERSQLEGAI
Ga0210396_108826061	3300021180	Soil	VNRAHIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTLLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLGLPV
Ga0210396_117522001	3300021180	Soil	MRARFEEASQTFLTLKLEIALVNRTDIYCRAIKRTFANLYGVSTETVDVSWTTGKTIVVQCAGKTFLHPILSDPEDDAPEFTCVDEDPVIVNLTDDE
Ga0210393_104345882	3300021401	Soil	VNQTDIYRQAIKRTLADLYGVSPDTVDVTWTSDNTIVVQCAGKTFIHLILSDPDDDAPEFLCPDEDPVIVNLTTMNGTSLSVRSDED
Ga0210393_112561731	3300021401	Soil	LKIAFVNRTDIYRQAIKRTFVDLYGVSPDTVDVSWTTGKTIVVHCAGKPFIHPILSDPDDEAPEFTCLDEDPIIVNLTDEEWHQIESAV
Ga0210397_105487393	3300021403	Soil	VNQTDIYRQTIKRTFAELYGVSPDTVDVTWTSDNTIVVQCAGKTFIHLILSDPDDDAPEFLCPDEDSVIVNLTTMNGTSLSARSDED
Ga0210397_112084902	3300021403	Soil	VNRAHIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFICRDEDPVIVNFDR
Ga0210389_113437911	3300021404	Soil	VNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLGLPV
Ga0210387_109259311	3300021405	Soil	TYFFALKLEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWTTGKTIVVQCVGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTV
Ga0210387_110145582	3300021405	Soil	TDIYRQAIKRTFADLYGVSPDTVDVTWTSDNTIVVQCAGKTFIHLILRDPDDDAPEFLCPDEDPVIVNLTTMNGTSLSARSDED
Ga0210386_103171842	3300021406	Soil	QTFLAVELEIAFVNRTDIYRQAIKRTFADLYSVSSDTVAVSWTSGESIAVQCAGETVLHPILSDPDDDTPEFTCVNEDPVIVNLTDDERSQIEHPI
Ga0210386_108589331	3300021406	Soil	VNRTDIYRQAIKRTFADLYGVSPDTVDVRWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLDEDPVIVNFTDDERHRLELAT
Ga0210386_113773752	3300021406	Soil	LKIAFVNRTDIYRQAIKRTFVDLYGVSPDTVDVSWTTGKTIVVHCAGKTFLHPILSDPDDEAPEFTCLDEDPVIVNLTDEEWHQIESAV
Ga0210394_104692482	3300021420	Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVNLTDDERSQLEGAI
Ga0210394_109615801	3300021420	Soil	VINSQVYDESTQTILALELEIAFVNRTDVYRQAIKRTFADLYGVSPDTVEVSWTTGKIIVVQCAGKTFLHPILSDPDDDAPEFTCLDEDPVIVNLTDDERHQLELAV
Ga0210391_110621192	3300021433	Soil	EEANQKFLALELEIAFVNRTDIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLGLPV
Ga0210390_100998414	3300021474	Soil	VNRANIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLDLPV
Ga0210390_107120761	3300021474	Soil	VNRTDIYCKSIKRTFANLYGVSPDTVEVSWTSGESIAVQCAGKTFLHQILSDPDDDAPEFTCPDEDPVIVNLTDDERHQLELAI
Ga0210392_113111321	3300021475	Soil	MTCFFALELEIAFVNRTDIYRQAIKRSFADLYGVSPGTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVN
Ga0210402_114455922	3300021478	Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVAQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV
Ga0210402_117438441	3300021478	Soil	FVNQTDIYRQAIKRTLADLYGVSPDTVDVTWTSDNTIVVQCAGKTFIHLILSDPDDDAPEFLCPDEDPVIVNLTTMNGTSLSARSDED
Ga0210409_109779692	3300021559	Soil	FVNRAHIYRQAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTDDERRRIELTV
Ga0126371_135116421	3300021560	Tropical Forest Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILIDPDNDAPQFTCVEEDPVVVNLTDDERSQIESAIQ
Ga0212123_106265222	3300022557	Iron-Sulfur Acid Spring	MHEEVSQTFPALELEIAFVNRTDIYRRAIKRTFANLYGVSPDTVDVGWTIGKTIVVQCAGKTFLHPILSDPDDDAPQFTCPDEDPVIVNLTDDERSQLERAV
Ga0209624_102331433	3300027895	Forest Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVVQCASKTFLQPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV
Ga0209006_102995923	3300027908	Forest Soil	LEIAFVNRTDIYRQAIKRTFADLYGVSPGRVDVSKSTGETILVRCAGKTFLHPILSEPDDDTPEFTCRDEDPVIVNLTDDERRRLELPV
Ga0209006_109411062	3300027908	Forest Soil	VNRTDVYRRAIKRTFADLYGVSPDTVDVSWTTGKTIVVHCAGKTFLHPILSDPDDEAPEFTCLDEDPIIVNLTDEEWHQIESAV
Ga0209526_101409752	3300028047	Forest Soil	VTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGMTIVVQCASKTFLQPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV
Ga0209526_103468221	3300028047	Forest Soil	VNRAHIYRQAIKRTFADLYGVSPDMVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCFDEDPVIVNLTDDERSQLERAI
Ga0209526_105530341	3300028047	Forest Soil	IKRTFANLYGVSPDMVEVSWTSGESIAVQCAGKTFLHPVLSDPDDDAPEFTCLEEDPVIVNLTDDERRRLELTV
Ga0222749_103723812	3300029636	Soil	VNRTDIYRRAIKRTFANLYGVSPDTVDVIWTTGRTIVVQCAGKTFLHPILSDPDDDTPEFTCLNEDPVIVNLTDDEWHQLELAV
Ga0170824_1256455242	3300031231	Forest Soil	VNRAHIFRHAIKRTFADLYGVSPGTVDVSWSTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLELPV
Ga0318541_101975362	3300031545	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTWTSAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0310915_104380762	3300031573	Soil	MNTTAVYRRAIKRTFADLYGASPDSVDVTWTSAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0310686_1088325801	3300031708	Soil	IGNSFVNRADIYGQAIKRTFANLYGVSPDMVEVSWTSGESIAVQCAGKTFLHPVLSDPDDDAPEFTCLEEDPVIVNLTDDERRRLELTV
Ga0310686_1183285622	3300031708	Soil	LAFKLEIALVNRTDIYRQAIQRTFANLYGVSFETVEVGWTSGESITVQCAGKTFHHLIVSDPDDDAPEFVCPEEDPVIVNLTDDERHQLELAI
Ga0307474_111031791	3300031718	Hardwood Forest Soil	FVTRTDIYRQAIKRTFADLYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV
Ga0307474_115837062	3300031718	Hardwood Forest Soil	ASQTFLALELEIAFVNRTDIYRQAIKRTFADLYSVSPGTVDVSWTTGKTIVVQCAGKTFFHPILSASDDDELEFTCLDEDPVIVTLVDDERIQLESAVG
Ga0306918_107284692	3300031744	Soil	LEIAFVNRADIYRQAIKRTFANLYGVSPNTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESASHECG
Ga0307475_107937491	3300031754	Hardwood Forest Soil	VNRTDIYRLAIKRTFADLYGVSPDTVDVSWTTGKTIVVQCAGKTFLHPILSDPDDDAPEFTCLEEDPVIVNLTGDERRRLELTV
Ga0306925_102411202	3300031890	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTWTGAKTVVVRCAGKTFIHLILSDPDDDAPELLSADEDPVIVNLTDEERHQLERAI
Ga0306923_114499321	3300031910	Soil	LLSKLEIAFVNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVKCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESASHECG
Ga0306921_101865974	3300031912	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTWTGAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0306921_109717423	3300031912	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESAIQ
Ga0310916_106854392	3300031942	Soil	LLSKLEIAFVNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESASHECG
Ga0310916_115649011	3300031942	Soil	MKRIDIYHQAIKRTFASLYGVSPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI
Ga0310910_103776472	3300031946	Soil	MNATAVYRRAIKRTFADLYGVSPDSVDVTWTGAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0310909_102785252	3300031947	Soil	MNTTAVYRRAIKRTFADLYGVSPDSVDVTWTSAKTVVVQCAGKTFIHLILSDPDDDAPLSADEDPVIVNLTDEERHQLERAI
Ga0306926_105321042	3300031954	Soil	MNATAVYRRAIKRTFADLYGVSPDSVDVTWTSAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0306926_114814922	3300031954	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLVEDPVVVNLTDDERSQIESASHECG
Ga0306922_123463112	3300032001	Soil	VNRADIYRQAIKRTLANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDLVVVNLT
Ga0306924_107023773	3300032076	Soil	MKRIDIYRQAIKRTFASLYGVLPDAVDASWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI
Ga0306924_124469542	3300032076	Soil	VNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDE
Ga0311301_101620937	3300032160	Peatlands Soil	VNRTDIYRQAIKRTFADLYGVSPDTVDVSWTTGKTIVAQCAGKTFLHPILSDPDDDAPEFTCRDEDPVIVNLTDDERRRLELPV
Ga0311301_124841211	3300032160	Peatlands Soil	VTRTDTYRQAIKRTFADVYGVSPATVEVSWTTGKTIVVQCAGKTFLHPILSEPDDDTPEFTCLDEDPVIVTLMDDERSQIESAV
Ga0306920_1015024772	3300032261	Soil	MKRIDIYRQAIKRTFASLYGVLPDAVDANWTSNDTIVVQCAGKTFIHLILSDPDDDAPEFLCRDEDPVIVNLTSDERSQLESAI
Ga0306920_1021238853	3300032261	Soil	EIAFVKRADIYRQAIKRTFANLYSVSPDTVEVSWTTGKTIVVECAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESASHECG
Ga0310914_108495902	3300033289	Soil	MNTTAVYRRAIKRTFEDLYGVSPDSVDVTWTSAKTVVVQCAGKTFIHLILSDPDDDAPEFLSADEDPVIVNLTDEERHQLERAI
Ga0310914_116660682	3300033289	Soil	PKLEVAFVNRADIYRQAIKRTFANLYSVSPDTVEVSWTTGRTIVVQCAGKTFLHPILSDPDNDAPQFTCLEEDPVVVNLTDDERSQIESAIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054630

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences