Metagenome / Metatranscriptome Family F054642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054642
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	60 residues
Representative Sequence	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Number of Associated Samples	97
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.28 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	79.14 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.288 % of family members)
Environment Ontology (ENVO)	Unclassified (48.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.201 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.18% β-sheet: 0.00% Coil/Unstructured: 56.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF13407	Peripla_BP_4	28.06
PF00701	DHDPS	3.60
PF08570	DUF1761	1.44
PF09084	NMT1	0.72
PF00005	ABC_tran	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	7.19
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.04 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1045351	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1063538	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1002938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3195	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1017362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10000799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6410	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1006451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1007943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1501	Open in IMG/M
3300005162\|Ga0066814_10081198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300005332\|Ga0066388_101062600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300005332\|Ga0066388_105985673	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300005332\|Ga0066388_106363163	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005332\|Ga0066388_107866590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300005363\|Ga0008090_10083874	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300005364\|Ga0070673_101205487	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300005440\|Ga0070705_101722446	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005467\|Ga0070706_101542394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300005467\|Ga0070706_102170539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300005764\|Ga0066903_100377903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2313	Open in IMG/M
3300005764\|Ga0066903_102680254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300005764\|Ga0066903_105024513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300005764\|Ga0066903_107208192	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300005764\|Ga0066903_107230235	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300006051\|Ga0075364_10866043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300006163\|Ga0070715_10001875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6301	Open in IMG/M
3300006854\|Ga0075425_100066701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4046	Open in IMG/M
3300006914\|Ga0075436_101264885	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300009147\|Ga0114129_10566508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300010043\|Ga0126380_10053341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2198	Open in IMG/M
3300010046\|Ga0126384_10034305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3394	Open in IMG/M
3300010046\|Ga0126384_10442703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300010046\|Ga0126384_10945581	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300010046\|Ga0126384_11832005	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300010047\|Ga0126382_10070317	All Organisms → cellular organisms → Bacteria → Proteobacteria	2142	Open in IMG/M
3300010047\|Ga0126382_10272969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1253	Open in IMG/M
3300010048\|Ga0126373_10219781	All Organisms → cellular organisms → Bacteria → Proteobacteria	1852	Open in IMG/M
3300010048\|Ga0126373_10951924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300010359\|Ga0126376_12230539	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300010360\|Ga0126372_11644214	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300010361\|Ga0126378_10730490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1101	Open in IMG/M
3300010361\|Ga0126378_12951243	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300010366\|Ga0126379_10668712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300010376\|Ga0126381_103023392	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300010376\|Ga0126381_104417950	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300010398\|Ga0126383_11662927	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300010398\|Ga0126383_13290996	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300010863\|Ga0124850_1108066	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300012209\|Ga0137379_10059114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3691	Open in IMG/M
3300012582\|Ga0137358_10137489	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
3300012948\|Ga0126375_10103531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1693	Open in IMG/M
3300012948\|Ga0126375_11126489	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300012948\|Ga0126375_11220093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300012948\|Ga0126375_11334315	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300012958\|Ga0164299_10407169	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300012971\|Ga0126369_10796402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300012971\|Ga0126369_10830978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300012971\|Ga0126369_10895532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300012971\|Ga0126369_11004509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300012971\|Ga0126369_11176027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300015373\|Ga0132257_104143044	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300016270\|Ga0182036_10713113	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300016294\|Ga0182041_10268837	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300016371\|Ga0182034_10233091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1442	Open in IMG/M
3300016371\|Ga0182034_10246143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300016422\|Ga0182039_10106106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300016422\|Ga0182039_10286272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1359	Open in IMG/M
3300016422\|Ga0182039_10524242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1026	Open in IMG/M
3300018433\|Ga0066667_12133767	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021178\|Ga0210408_11094757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300021560\|Ga0126371_11740795	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300021560\|Ga0126371_13050489	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300025898\|Ga0207692_10332688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300026557\|Ga0179587_10677758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300027824\|Ga0209040_10117483	All Organisms → cellular organisms → Bacteria → Proteobacteria	1479	Open in IMG/M
3300028884\|Ga0307308_10361023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300028885\|Ga0307304_10585474	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031093\|Ga0308197_10404546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300031543\|Ga0318516_10629593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300031544\|Ga0318534_10059418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2152	Open in IMG/M
3300031545\|Ga0318541_10009241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4369	Open in IMG/M
3300031545\|Ga0318541_10010627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4123	Open in IMG/M
3300031545\|Ga0318541_10745700	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300031546\|Ga0318538_10021932	All Organisms → cellular organisms → Bacteria → Proteobacteria	2861	Open in IMG/M
3300031561\|Ga0318528_10024680	All Organisms → cellular organisms → Bacteria → Proteobacteria	2909	Open in IMG/M
3300031564\|Ga0318573_10176146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300031573\|Ga0310915_10075991	All Organisms → cellular organisms → Bacteria → Proteobacteria	2223	Open in IMG/M
3300031573\|Ga0310915_11209436	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300031640\|Ga0318555_10187069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300031668\|Ga0318542_10245812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300031668\|Ga0318542_10400853	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300031679\|Ga0318561_10066954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1832	Open in IMG/M
3300031680\|Ga0318574_10052414	All Organisms → cellular organisms → Bacteria → Proteobacteria	2150	Open in IMG/M
3300031680\|Ga0318574_10615715	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300031681\|Ga0318572_10121102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300031713\|Ga0318496_10110022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300031723\|Ga0318493_10536892	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300031723\|Ga0318493_10689048	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300031724\|Ga0318500_10064298	All Organisms → cellular organisms → Bacteria → Proteobacteria	1595	Open in IMG/M
3300031744\|Ga0306918_10109255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1983	Open in IMG/M
3300031751\|Ga0318494_10130147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300031763\|Ga0318537_10075423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300031765\|Ga0318554_10054886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2187	Open in IMG/M
3300031765\|Ga0318554_10126238	All Organisms → cellular organisms → Bacteria → Proteobacteria	1446	Open in IMG/M
3300031768\|Ga0318509_10071616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1819	Open in IMG/M
3300031778\|Ga0318498_10196891	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300031780\|Ga0318508_1156471	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300031782\|Ga0318552_10024065	All Organisms → cellular organisms → Bacteria → Proteobacteria	2733	Open in IMG/M
3300031796\|Ga0318576_10350803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300031832\|Ga0318499_10002468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5061	Open in IMG/M
3300031832\|Ga0318499_10388678	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031833\|Ga0310917_10074570	All Organisms → cellular organisms → Bacteria → Proteobacteria	2136	Open in IMG/M
3300031833\|Ga0310917_10883257	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031845\|Ga0318511_10031086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2040	Open in IMG/M
3300031860\|Ga0318495_10007755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4349	Open in IMG/M
3300031879\|Ga0306919_10350563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1127	Open in IMG/M
3300031890\|Ga0306925_10215256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2072	Open in IMG/M
3300031893\|Ga0318536_10354571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300031894\|Ga0318522_10097312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300031894\|Ga0318522_10339990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300031896\|Ga0318551_10171801	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300031897\|Ga0318520_10117670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1510	Open in IMG/M
3300031941\|Ga0310912_10322944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300031945\|Ga0310913_10079535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2187	Open in IMG/M
3300031947\|Ga0310909_10461112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1066	Open in IMG/M
3300031981\|Ga0318531_10126917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300032001\|Ga0306922_10161088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2402	Open in IMG/M
3300032001\|Ga0306922_10189528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2206	Open in IMG/M
3300032010\|Ga0318569_10353832	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300032025\|Ga0318507_10416299	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300032041\|Ga0318549_10009293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3377	Open in IMG/M
3300032060\|Ga0318505_10003160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5055	Open in IMG/M
3300032065\|Ga0318513_10167161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300032066\|Ga0318514_10115372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1373	Open in IMG/M
3300032076\|Ga0306924_12020925	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300032090\|Ga0318518_10676401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300032091\|Ga0318577_10150207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300032091\|Ga0318577_10224416	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300032180\|Ga0307471_102445282	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300033290\|Ga0318519_10919335	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300034151\|Ga0364935_0148882	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.68%
Host-Associated	Host-Associated	4.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.96%
Plants	Host-Associated → Plants	4.32%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.16%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10453511	3300000580	Forest Soil	MRGRTIAGTIVAAVTALAVFAALSGRTAAESPFGDANAEPAPFNPQMAALMSMLIQPRHAKLGLAG
AF_2010_repII_A01DRAFT_10635381	3300000580	Forest Soil	MRGRTIAGTIVAAVTALAVFAALSGRTAAESPFGDANAEPAPFNPQMAALMSMLIQPRHAKLGLA
AF_2010_repII_A100DRAFT_10029386	3300000655	Forest Soil	MRGRVVAVMVVAAFAVFAPAAMWSGRTAAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAG
AF_2010_repII_A100DRAFT_10173621	3300000655	Forest Soil	MRGRVIAVMMIAALALFATVAIWSGRGAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAG
AF_2010_repII_A001DRAFT_100007991	3300000793	Forest Soil	MRGRVVAVMVVAAFAVFAPAAMWSGRTAAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAGK
AP72_2010_repI_A100DRAFT_10064511	3300000837	Forest Soil	MRRRVVAVMVVAAFTVFAAVALWSGRAAAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAEN
AP72_2010_repI_A100DRAFT_10079434	3300000837	Forest Soil	MRGRVVAVVVVAAFTVFAAAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAEN
Ga0066814_100811981	3300005162	Soil	MRGRVIAGMVVVAFTVFAILAVLSGRTVAQSPFGDANAEPAPFNPQM
Ga0066388_1010626003	3300005332	Tropical Forest Soil	MRGRVIAVMVVAALALFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKL
Ga0066388_1059856731	3300005332	Tropical Forest Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWP
Ga0066388_1063631631	3300005332	Tropical Forest Soil	MRGRVIAGMVVAAFMALATVTILSGRTAAQVPPFGDPNAEPTPFNPQMGALM
Ga0066388_1078665902	3300005332	Tropical Forest Soil	MRGRVIAGIVVVAFTIFAILAVWSGRTVAQSPFGDANAEPAPFNPQMAALMSMLI
Ga0008090_100838741	3300005363	Tropical Rainforest Soil	MRGRVVAVMVVAAFAVFAPAAMWSGRSAAQSPFGDPNAEPAPFNPQMAALM
Ga0070673_1012054871	3300005364	Switchgrass Rhizosphere	MRGPVIAGIVGVVIMASVAVLSDRTAAQSPFGDPNAEPSPFNPQMGALMSMLI
Ga0070705_1017224462	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPVIAGMVGVVIMASVAVLSDRTAAQSPFGDPNAEPSPFNPQMGALMSMLIQPRHTKLGLAGN
Ga0070706_1015423942	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGRVVAVILVAAFTAFATAAIWSDRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0070706_1021705391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGRVIAGMVVVAFTVFAILAVLSGRTVAQSPFGDANAEPAPFNPQMAALM
Ga0066903_1003779031	3300005764	Tropical Forest Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWPLAGYMLKE
Ga0066903_1026802542	3300005764	Tropical Forest Soil	MRGHAIAGTIVAAVTAFAVLVALSGRTAAESPFGDPNAEPAPFNPQMAALMSMLIQ
Ga0066903_1050245132	3300005764	Tropical Forest Soil	MRGPVIAGTVGAVIMASATVAVLSDRTAAQSPFGDPNAEPSPFNPQMGALMSMLIQPRHT
Ga0066903_1072081921	3300005764	Tropical Forest Soil	MRGRVVAVILVAAFTAFVTAAIWSGRTAAQSPFGDPNAEPAPFNPQMAA
Ga0066903_1072302352	3300005764	Tropical Forest Soil	MRGRVIAVMVVAGSTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWPLAGYMLK
Ga0075364_108660431	3300006051	Populus Endosphere	MRGPVIAGMVGAVIMASATVAVLSDRTAAQSPFGDPNAEPSPFNPQMGALMSMLIQPRHT
Ga0070715_100018757	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPVIAGIVGVVIMASVAVLSDRTAAQSPFGDPNAEPAPFNPQMSALMSMLIQPRHTKLGLAGNA
Ga0075425_1000667016	3300006854	Populus Rhizosphere	MRGRVIAGMVGAVIMASATVAVLSNRTGAQSPFGDPNAEPSPFNPQMGALMSMLIQPRHTKLGLAGNGE
Ga0075436_1012648852	3300006914	Populus Rhizosphere	MRGPVIAGMVGVVIMASVAVLSDRTAAQSPFGDPNAEPSPFNPQMG
Ga0114129_105665081	3300009147	Populus Rhizosphere	MRGPVIAGMVGVVTMASVAVLSDRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGN
Ga0126380_100533411	3300010043	Tropical Forest Soil	MRRRVVAVMVVAAFTVFAAVALWSGRAAAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKL
Ga0126384_100343056	3300010046	Tropical Forest Soil	MRGRVIAVMLVAVCTLLATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0126384_104427031	3300010046	Tropical Forest Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLAL
Ga0126384_109455811	3300010046	Tropical Forest Soil	MRGRVVAVILVAAFTAFVTAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLALAGKAENWP
Ga0126384_118320051	3300010046	Tropical Forest Soil	MRGRVVAVILVAAAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLALAGKAENWP
Ga0126382_100703175	3300010047	Tropical Forest Soil	LKENEVMRRRVVAVMVVAAFTVFAAVALWSGRAAAQSPFGDANAEPAPFNPQMAA
Ga0126382_102729691	3300010047	Tropical Forest Soil	MKAMHGRVIAGMVVVAFTAFAILAVLSGRTVAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKL
Ga0126373_102197811	3300010048	Tropical Forest Soil	MRGRVIAVMVVAALALFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0126373_109519241	3300010048	Tropical Forest Soil	MRRRVIAVMLVAVCTLLATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0126376_122305391	3300010359	Tropical Forest Soil	MRGRVIAVMVVAALALFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0126372_116442141	3300010360	Tropical Forest Soil	MRGPVIAGIIGAVIMASVTVAVVSDRTAAQSPFGDPNAEPAPFNPQMGALMSMLIQPRHTKL
Ga0126378_107304901	3300010361	Tropical Forest Soil	MRGRVIAVMLVAVCTLLATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0126378_129512432	3300010361	Tropical Forest Soil	MKVMRGRVVAVVVVAAFTVFAAAAIWSGRTAAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLALAGKAEN
Ga0126379_106687122	3300010366	Tropical Forest Soil	MKAMRGRVIAGMVVVAFTVFAILAVWSGRTVAQSPFGDANAEPAPFNPQMAAL
Ga0126381_1030233922	3300010376	Tropical Forest Soil	MRGRAIAGTLVAAVTAFAVLAALSGRTAAESPFGDPNAEPAPFNPQMAALMTMLIQPRHA
Ga0126381_1044179502	3300010376	Tropical Forest Soil	MKVMRGRVVAVMVVAAFAVFAPAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTK
Ga0126383_116629271	3300010398	Tropical Forest Soil	MKVMRGRVVAVVVVAAFTVFAAAAIWSGRTAAQSPFGDANAEPAPFNPQM
Ga0126383_132909962	3300010398	Tropical Forest Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLALAGKAE
Ga0124850_11080662	3300010863	Tropical Forest Soil	MRGRVIAVMVIAALALFFATAAIWSGRSAAESPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWPLAG
Ga0137379_100591143	3300012209	Vadose Zone Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNLRWPPS*
Ga0137358_101374891	3300012582	Vadose Zone Soil	MRGPVIAGTVGAIIMAFLTVAVLSDRTAAQSPFGDPNAEPAPFN
Ga0126375_101035314	3300012948	Tropical Forest Soil	MKVMRGRVVAVVVVAAFTVFAAAAIWSGRTAARSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAE
Ga0126375_111264892	3300012948	Tropical Forest Soil	MRGPVIAGMVGAVIMASATVAVVSDRTAAQSPFGDPNAEPAPFNPQM
Ga0126375_112200932	3300012948	Tropical Forest Soil	MKAMRGRVIAGMVVVAFTVFAILAVWSGRTLAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTK
Ga0126375_113343151	3300012948	Tropical Forest Soil	MKAMRGRVVAVMVVAAFTVFVAAAIWSGRTAAQSPFGDPNAEPAPFNPQMAAL
Ga0164299_104071693	3300012958	Soil	MRGPVIAGMVGAVIMASVAVLSDRTAAQSPFGDPNAEPAPFNPQ
Ga0126369_107964021	3300012971	Tropical Forest Soil	MRSGVVASIVGLAAVAAIAAFPSGSVAQSPFGDPNAEPAPFNPQMSALMSML
Ga0126369_108309783	3300012971	Tropical Forest Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLI
Ga0126369_108955322	3300012971	Tropical Forest Soil	MKAMRGRVIAGIVVVAFTVFAILAVWSGRTVAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAEN
Ga0126369_110045093	3300012971	Tropical Forest Soil	MRGPVIAGMVGAVIMASATVAVLSDRTVAQGPFGDPNAEPSPFNPQMGALMSMLIQPRHTKLGLA
Ga0126369_111760272	3300012971	Tropical Forest Soil	MRGRVIAGMVVVAFTAFAILAVLSGRTVAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAEN
Ga0132257_1041430441	3300015373	Arabidopsis Rhizosphere	MKVMRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQM
Ga0182036_107131132	3300016270	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLIQPRHTKLGLAGKAE
Ga0182041_102688373	3300016294	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGK
Ga0182034_102330913	3300016371	Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWPLAG
Ga0182034_102461432	3300016371	Soil	MRGRVIAGMVVVAFTVFAILAILSGRTVAQSPFGDANAEPAPFNPQMAALMSMLIQPRHTKLGLAG
Ga0182039_101061064	3300016422	Soil	MRGRVIEGMVVGAFTFFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLA
Ga0182039_102862721	3300016422	Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWPLA
Ga0182039_105242422	3300016422	Soil	MRGRVIAVILVAAFTAFATAAVWSGRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLA
Ga0066667_121337671	3300018433	Grasslands Soil	MRSRVIPVMLVAAFTAFATAAVLSSSSRSVAQQPTEHGPFGDPNADPAPFNPQM
Ga0210408_110947572	3300021178	Soil	MRGPVIAGTVGAVIMASLTVAVLPDRTAAQNPFGDPNAEPAPFNPQMSALMSMLIQPRHTKLGL
Ga0126371_117407952	3300021560	Tropical Forest Soil	MRGRVVAVILVAAAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLALAGK
Ga0126371_130504891	3300021560	Tropical Forest Soil	MRGRVIAVMVIAALALFFATAAIWSGRSAAESPFGDPNAEPAPFNPQMAALMSMLIQPRHTK
Ga0207692_103326883	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPVIAGMVGVVIMASVAVLSDRTAAQSPFGDPNAEPSPFNPQMGAL
Ga0179587_106777582	3300026557	Vadose Zone Soil	MRGRVIAGMVVVAFTVFAILAVLSGRTVAQSPFGDANAEPAPFNPRMAALMSMLIQ
Ga0209040_101174834	3300027824	Bog Forest Soil	MRGRVISVVMGGAFAAFVTIAALSGRSVAQSPFGDPNAEPAPFNPQMAALMSMLIQPR
Ga0307308_103610231	3300028884	Soil	MRSRTAVVVALVGFAAFVAAAGWSGHTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPR
Ga0307304_105854742	3300028885	Soil	MRGPVIAGMVGVVIMASVAVLSDRTAAQSPFGDPNAEPSPFNPQMGALMSMLIQPRHTKLGLAGNAEN
Ga0308197_104045462	3300031093	Soil	MRSRVIPVMLAAALMAFGTAAVLSSRSVAQQPALEHGPFGDPNADPAPFNPQMSALMAMLIQPRHAKLGLA
Ga0318516_106295931	3300031543	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRH
Ga0318534_100594181	3300031544	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAA
Ga0318541_100092411	3300031545	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLA
Ga0318541_100106271	3300031545	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAE
Ga0318541_107457001	3300031545	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSM
Ga0318538_100219321	3300031546	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNM
Ga0318528_100246801	3300031561	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALM
Ga0318573_101761461	3300031564	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0310915_100759911	3300031573	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKL
Ga0310915_112094361	3300031573	Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSML
Ga0318555_101870692	3300031640	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMS
Ga0318542_102458121	3300031668	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAG
Ga0318542_104008531	3300031668	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLIQPRHTKLGLAG
Ga0318561_100669541	3300031679	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0318574_100524141	3300031680	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0318574_106157151	3300031680	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSML
Ga0318572_101211021	3300031681	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLIQPRHTKLGLAGKAEN
Ga0318496_101100221	3300031713	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLI
Ga0318493_105368921	3300031723	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKA
Ga0318493_106890481	3300031723	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKL
Ga0318500_100642984	3300031724	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLG
Ga0306918_101092551	3300031744	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAE
Ga0318494_101301473	3300031751	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQ
Ga0318537_100754232	3300031763	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0318554_100548861	3300031765	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKA
Ga0318554_101262381	3300031765	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLI
Ga0318509_100716163	3300031768	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLA
Ga0318498_101968911	3300031778	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALM
Ga0318508_11564711	3300031780	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALM
Ga0318552_100240655	3300031782	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMN
Ga0318576_103508031	3300031796	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQM
Ga0318499_100024681	3300031832	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALM
Ga0318499_103886782	3300031832	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAAL
Ga0310917_100745701	3300031833	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGL
Ga0310917_108832571	3300031833	Soil	MRGRAIAGTLVAAVTAFAVLAALSGRTAAESPFGDPNAEPAPFNPQMAALMSMLIQPRHA
Ga0318511_100310865	3300031845	Soil	MRGRVVAVMVVAAFTAFAAAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAGKAENWP
Ga0318495_100077551	3300031860	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQP
Ga0306919_103505632	3300031879	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPR
Ga0306925_102152561	3300031890	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAAL
Ga0318536_103545711	3300031893	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKL
Ga0318522_100973123	3300031894	Soil	MRGRVIAVMLVAALALFATAAMWSGRSAAQSPFGDPNAEPAPFNPQMAALMN
Ga0318522_103399902	3300031894	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSM
Ga0318551_101718013	3300031896	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSML
Ga0318520_101176701	3300031897	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLIQPRHT
Ga0310912_103229441	3300031941	Soil	MRGRVIAVILVAAFTAFATAAVWSGRTVAQSPFGDPNAEPAPFNPQMAA
Ga0310913_100795351	3300031945	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0310909_104611122	3300031947	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMS
Ga0318531_101269172	3300031981	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLAG
Ga0306922_101610885	3300032001	Soil	MRGRVTAVMMVAALGVYATAAIWSGRSTAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLGLA
Ga0306922_101895284	3300032001	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMSM
Ga0318569_103538321	3300032010	Soil	MRGRVIAVMLVAALALFATAAVWSGRSAAQSPFGDPNAEPAPFNPQMAALMNMLIQPRH
Ga0318507_104162991	3300032025	Soil	MRGRVIAVILVAAFTAFATAAVWSGRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRH
Ga0318549_100092935	3300032041	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRH
Ga0318505_100031608	3300032060	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQP
Ga0318513_101671612	3300032065	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFN
Ga0318514_101153721	3300032066	Soil	MRGRVVAVILVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSM
Ga0306924_120209251	3300032076	Soil	MRGRVVAVVLVAAFTAFATAAIWSGRTAAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHTKLA
Ga0318518_106764011	3300032090	Soil	MRGRVIEGMVVVAFTVFAILAVLSSRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRH
Ga0318577_101502071	3300032091	Soil	MRRRVIAVMLVAVCTLFATAAIWSGRSAAQSPFGDPNAEPAPFNPQMAALMSMLIQ
Ga0318577_102244162	3300032091	Soil	MRGRVIAVILVAAFTAFATAAVWSGRTVAQSPFGDPNAEPAPFNPQMAALMSMLIQPRHT
Ga0307471_1024452822	3300032180	Hardwood Forest Soil	MVGAVIMASVAVLSDRTAAQSPFGDPNAEPAPFNPQMSALMSMLIQPRHTKLGL
Ga0318519_109193351	3300033290	Soil	MRGRVIAVILVAAFTALATAAVWSGRTVAQSPFGDPNAEPAPFNPQMAALMSML
Ga0364935_0148882_3_173	3300034151	Sediment	MRGRFIAVVAVAAFAAFVTIAALSGRSVAQSPFGDANAEPAPFNPQMSALMGMLIQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences