Metagenome / Metatranscriptome Family F054658

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054658
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	78 residues
Representative Sequence	RAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Number of Associated Samples	101
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.72 %
% of genes near scaffold ends (potentially truncated)	96.40 %
% of genes from short scaffolds (< 2000 bps)	94.24 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.237 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.338 % of family members)
Environment Ontology (ENVO)	Unclassified (41.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.993 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.87% β-sheet: 2.97% Coil/Unstructured: 84.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF13410	GST_C_2	3.60
PF04392	ABC_sub_bind	2.88
PF13417	GST_N_3	2.88
PF03401	TctC	2.16
PF00106	adh_short	2.16
PF00248	Aldo_ket_red	2.16
PF12800	Fer4_4	1.44
PF00589	Phage_integrase	1.44
PF14497	GST_C_3	0.72
PF00239	Resolvase	0.72
PF13751	DDE_Tnp_1_6	0.72
PF00753	Lactamase_B	0.72
PF01068	DNA_ligase_A_M	0.72
PF00216	Bac_DNA_binding	0.72
PF04143	Sulf_transp	0.72
PF12833	HTH_18	0.72
PF13474	SnoaL_3	0.72
PF04075	F420H2_quin_red	0.72
PF00816	Histone_HNS	0.72
PF00440	TetR_N	0.72
PF04324	Fer2_BFD	0.72
PF07045	DUF1330	0.72
PF01609	DDE_Tnp_1	0.72
PF02371	Transposase_20	0.72
PF05199	GMC_oxred_C	0.72
PF00211	Guanylate_cyc	0.72
PF00378	ECH_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.16
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.72
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.72
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG2916	DNA-binding protein H-NS	Transcription [K]	0.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.72
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
All Organisms	root	All Organisms	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
cellular organisms	root	All Organisms → cellular organisms	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.07 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.72 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10741096	Not Available	568	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10006230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3273	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10102895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1067855	Not Available	629	Open in IMG/M
3300005172\|Ga0066683_10538233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300005181\|Ga0066678_10523656	Not Available	788	Open in IMG/M
3300005332\|Ga0066388_100231913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2479	Open in IMG/M
3300005332\|Ga0066388_100635845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1684	Open in IMG/M
3300005332\|Ga0066388_102159820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300005332\|Ga0066388_102935498	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300005332\|Ga0066388_104888559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300005363\|Ga0008090_15886232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300005436\|Ga0070713_100113933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2361	Open in IMG/M
3300005444\|Ga0070694_101555105	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005471\|Ga0070698_101345574	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005546\|Ga0070696_101181353	Not Available	646	Open in IMG/M
3300005554\|Ga0066661_10611893	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300005713\|Ga0066905_100422073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1088	Open in IMG/M
3300005713\|Ga0066905_100783818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005764\|Ga0066903_103729002	Not Available	819	Open in IMG/M
3300005764\|Ga0066903_105418285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300005764\|Ga0066903_106174164	Not Available	626	Open in IMG/M
3300005764\|Ga0066903_106360943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300005764\|Ga0066903_106655336	Not Available	601	Open in IMG/M
3300005764\|Ga0066903_107412705	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_109122510	Not Available	501	Open in IMG/M
3300006058\|Ga0075432_10170205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300006844\|Ga0075428_100102061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3127	Open in IMG/M
3300006845\|Ga0075421_101131382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	878	Open in IMG/M
3300006852\|Ga0075433_10353490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300006871\|Ga0075434_101686236	Not Available	642	Open in IMG/M
3300009147\|Ga0114129_11751234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300009162\|Ga0075423_11958142	Not Available	634	Open in IMG/M
3300009553\|Ga0105249_11195371	Not Available	831	Open in IMG/M
3300009792\|Ga0126374_11401771	Not Available	569	Open in IMG/M
3300010043\|Ga0126380_11416257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300010046\|Ga0126384_10659407	Not Available	923	Open in IMG/M
3300010047\|Ga0126382_10936606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	753	Open in IMG/M
3300010047\|Ga0126382_11252409	Not Available	668	Open in IMG/M
3300010048\|Ga0126373_10357583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300010048\|Ga0126373_12252657	Not Available	606	Open in IMG/M
3300010048\|Ga0126373_13180353	Not Available	511	Open in IMG/M
3300010336\|Ga0134071_10583550	Not Available	583	Open in IMG/M
3300010358\|Ga0126370_11010644	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300010359\|Ga0126376_12550760	Not Available	559	Open in IMG/M
3300010361\|Ga0126378_10254603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1850	Open in IMG/M
3300010361\|Ga0126378_10572785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300010361\|Ga0126378_12610202	Not Available	577	Open in IMG/M
3300010362\|Ga0126377_10969859	Not Available	915	Open in IMG/M
3300010366\|Ga0126379_10728647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300010371\|Ga0134125_12605952	Not Available	550	Open in IMG/M
3300010376\|Ga0126381_100974943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300010376\|Ga0126381_101243207	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010376\|Ga0126381_103238951	Not Available	643	Open in IMG/M
3300010398\|Ga0126383_11476918	Not Available	770	Open in IMG/M
3300010398\|Ga0126383_11493781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300010398\|Ga0126383_11991780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300011106\|Ga0151489_1484316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012198\|Ga0137364_10560929	Not Available	860	Open in IMG/M
3300012198\|Ga0137364_10809713	Not Available	708	Open in IMG/M
3300012200\|Ga0137382_10648352	Not Available	755	Open in IMG/M
3300012211\|Ga0137377_10753103	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012361\|Ga0137360_11669703	Not Available	542	Open in IMG/M
3300012362\|Ga0137361_11092719	Not Available	718	Open in IMG/M
3300012582\|Ga0137358_10122848	Not Available	1765	Open in IMG/M
3300012582\|Ga0137358_10653729	Not Available	704	Open in IMG/M
3300012923\|Ga0137359_11785242	Not Available	502	Open in IMG/M
3300012948\|Ga0126375_10341370	Not Available	1058	Open in IMG/M
3300012960\|Ga0164301_10830049	Not Available	710	Open in IMG/M
3300012971\|Ga0126369_11587239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300012971\|Ga0126369_13023426	Not Available	551	Open in IMG/M
3300012977\|Ga0134087_10814193	Not Available	507	Open in IMG/M
3300016270\|Ga0182036_10049736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2626	Open in IMG/M
3300016294\|Ga0182041_11537708	Not Available	613	Open in IMG/M
3300016294\|Ga0182041_11642366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300016319\|Ga0182033_10661581	Not Available	912	Open in IMG/M
3300016319\|Ga0182033_11504760	Not Available	607	Open in IMG/M
3300016341\|Ga0182035_11339088	Not Available	642	Open in IMG/M
3300016357\|Ga0182032_10284998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1298	Open in IMG/M
3300016357\|Ga0182032_11543518	Not Available	577	Open in IMG/M
3300016371\|Ga0182034_11070349	Not Available	698	Open in IMG/M
3300016387\|Ga0182040_11633649	Not Available	549	Open in IMG/M
3300016404\|Ga0182037_11619109	Not Available	576	Open in IMG/M
3300016404\|Ga0182037_12074649	Not Available	511	Open in IMG/M
3300016445\|Ga0182038_11572481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300016445\|Ga0182038_11945313	Not Available	532	Open in IMG/M
3300021560\|Ga0126371_12245496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300022512\|Ga0242676_1049008	Not Available	523	Open in IMG/M
3300022724\|Ga0242665_10363173	Not Available	521	Open in IMG/M
3300022726\|Ga0242654_10231062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	655	Open in IMG/M
3300026309\|Ga0209055_1178932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	658	Open in IMG/M
3300026310\|Ga0209239_1227123	Not Available	651	Open in IMG/M
3300027050\|Ga0209325_1003350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1592	Open in IMG/M
3300031022\|Ga0138301_1852175	Not Available	533	Open in IMG/M
3300031543\|Ga0318516_10141052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1381	Open in IMG/M
3300031546\|Ga0318538_10672849	Not Available	561	Open in IMG/M
3300031546\|Ga0318538_10742669	Not Available	532	Open in IMG/M
3300031549\|Ga0318571_10016472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1865	Open in IMG/M
3300031640\|Ga0318555_10028637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2692	Open in IMG/M
3300031713\|Ga0318496_10622107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300031720\|Ga0307469_10650869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300031724\|Ga0318500_10258254	Not Available	846	Open in IMG/M
3300031724\|Ga0318500_10430600	Not Available	658	Open in IMG/M
3300031764\|Ga0318535_10043763	Not Available	1847	Open in IMG/M
3300031765\|Ga0318554_10728427	Not Available	556	Open in IMG/M
3300031769\|Ga0318526_10114527	Not Available	1084	Open in IMG/M
3300031781\|Ga0318547_10424496	Not Available	817	Open in IMG/M
3300031805\|Ga0318497_10623088	Not Available	605	Open in IMG/M
3300031819\|Ga0318568_10092569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1802	Open in IMG/M
3300031833\|Ga0310917_10405008	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031846\|Ga0318512_10610620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300031879\|Ga0306919_10160578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1646	Open in IMG/M
3300031890\|Ga0306925_10453238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1370	Open in IMG/M
3300031890\|Ga0306925_11632114	Not Available	625	Open in IMG/M
3300031894\|Ga0318522_10164458	Not Available	838	Open in IMG/M
3300031894\|Ga0318522_10314645	Not Available	593	Open in IMG/M
3300031897\|Ga0318520_10196740	Not Available	1187	Open in IMG/M
3300031897\|Ga0318520_10339560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300031912\|Ga0306921_10743127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1124	Open in IMG/M
3300031941\|Ga0310912_11287621	Not Available	554	Open in IMG/M
3300031942\|Ga0310916_10476422	Not Available	1063	Open in IMG/M
3300031945\|Ga0310913_10941986	Not Available	606	Open in IMG/M
3300031946\|Ga0310910_11008556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300031954\|Ga0306926_12020851	Not Available	647	Open in IMG/M
3300031959\|Ga0318530_10389984	Not Available	577	Open in IMG/M
3300032001\|Ga0306922_10669578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300032035\|Ga0310911_10542549	Not Available	674	Open in IMG/M
3300032039\|Ga0318559_10265161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300032055\|Ga0318575_10463628	Not Available	643	Open in IMG/M
3300032059\|Ga0318533_11266144	Not Available	539	Open in IMG/M
3300032063\|Ga0318504_10027951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2211	Open in IMG/M
3300032076\|Ga0306924_10721703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1117	Open in IMG/M
3300032094\|Ga0318540_10429085	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300032261\|Ga0306920_101064984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300032261\|Ga0306920_102359327	Not Available	735	Open in IMG/M
3300032261\|Ga0306920_104186431	Not Available	520	Open in IMG/M
3300033289\|Ga0310914_10462413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1148	Open in IMG/M
3300033289\|Ga0310914_11662581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.24%
Host-Associated	Host-Associated	5.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.24%
Plants	Host-Associated → Plants	5.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.86%
Loam	Environmental → Terrestrial → Soil → Loam	14.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_107410963	3300000550	Soil	RAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
AF_2010_repII_A1DRAFT_100062306	3300000597	Forest Soil	AGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYAGSYAIACERLKSGYAAPYGPIFY*
AF_2010_repII_A1DRAFT_101028951	3300000597	Forest Soil	AGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSDYAAPYGPIFY*
AF_2010_repII_A100DRAFT_10678552	3300000655	Forest Soil	GVSRRAYRRAYRSAAYARAAGYGSGLDSGYGCPAYSSYWVPYGTSAAAPYGIAASSYAIACERLKSGYAAPNGPIFY*
Ga0066683_105382331	3300005172	Soil	ERPLTATSVAGVSRRAYRRAYRSAAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSSAPYGVYASSYALACERLKSGYADPYGPIFY*
Ga0066678_105236563	3300005181	Soil	TSVAGVSRRAYRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSYAIAYKRLQSGYAAPYGPIFY*
Ga0066388_1002319133	3300005332	Tropical Forest Soil	HRSAAHASAAGYGSGLNSGYGCPASGYWVPYGTSSSAPWGVYASSFALACERVKSGYADPYGPIFY*
Ga0066388_1006358454	3300005332	Tropical Forest Soil	APYAAGYGSGLYSGYGCPAYSSYWVPYGTSWSAPYGISASSYAQACERLKSGYAAPYGPIFY*
Ga0066388_1021598204	3300005332	Tropical Forest Soil	SAEAQERPLTATRVAGVSRRAYRRAYRSPAYASAAGYGSGLHSGYGCPASSYWVPYGTSSSAPWGIYASSYAMACERVKSGYAAPYGPIFY*
Ga0066388_1029354982	3300005332	Tropical Forest Soil	AAGNGSGSYSGYGCPASNYWIPYGTSSSAPWGVYASSYALACERVKSGYAAPYGPIFY*
Ga0066388_1048885591	3300005332	Tropical Forest Soil	VGLSLDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPTYSSYWVPYGTSSSAPYGIYASSYAKACERLKSGYAAPYGPIFY*
Ga0008090_158862322	3300005363	Tropical Rainforest Soil	GLSLDSAEAQERPLTATSVAGVSQRAYRRAYRSPAYASAAGYGSGLYSGYGCHPASNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0070713_1001139331	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	HSRRAYRRAYRGATYAGAAGYGSGLSSGYGCPAYSSYWVPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY*
Ga0070694_1015551052	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SRRAYRRAYRSATYAGAAGYGSGLYSGYGCPAYSSYWVPYGTSWSAPYGISASSYAQACERLKSGYAAPYGPIFY*
Ga0070698_1013455742	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	HRRAYRRAAYGTAVAGSGGYGYSSPAYSSYWIPYGTSYAAPYGIYSSSYAIAHERLKSGYAAPYGPIFY*
Ga0070696_1011813531	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VALSLASAEAQERPLTATSVAGHSRRAYRRAYRGATYAGAAGYGSGLSSGYGCPAYSSYWVPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY*
Ga0066661_106118931	3300005554	Soil	SLASAEAQERPLAATSVAGVSRRAYRRAYRSDAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0066905_1004220731	3300005713	Tropical Forest Soil	AAGYGSGLYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYALACERLKSGYAAPYGPIFY*
Ga0066905_1007838183	3300005713	Tropical Forest Soil	AAYASAAGYGSGLYSGYGCPTYSSYWVPYGTSSSAPYGISSSYAIACERLKSGYAAPYGPIFY*
Ga0066903_1037290021	3300005764	Tropical Forest Soil	YRSAAYASAAGYGYGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0066903_1054182852	3300005764	Tropical Forest Soil	SAYRRAHHSAAYARAGGYGSGLDSGYGCPAYSNYWVPYGTSAAAPYGIAASSYAIACERLKSGYAVPNGPIFY*
Ga0066903_1061741642	3300005764	Tropical Forest Soil	VAYASVAGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIF
Ga0066903_1063609432	3300005764	Tropical Forest Soil	AAHASAAGYGSGLNSGYGCPASGYWVPYGTSSSAPWGVYASSFAMACERVKSGYAAPYGPIFY*
Ga0066903_1066553362	3300005764	Tropical Forest Soil	NVELSLASAEAQERPLTATRVAGVSQRAYRRAYRSPAYANAAGNGSGSYSGYGCPASNYWIPYGTSSSAPWGVYSSSYALACERVKSGYAAPYGPIFY*
Ga0066903_1074127051	3300005764	Tropical Forest Soil	QEGRPLTHPRTYRRAAYGTAVTGSGGYGYSSPAYSSYWIPYGTSYAAPYGVYSSSYAIAHERLKSGYAAPYGPIFY*
Ga0066903_1091225102	3300005764	Tropical Forest Soil	SAAGYGSGLNSGYGCPASGYWVPYGTSSSAPWGVYASSFALACERLKSGYADPYGPIFY*
Ga0075432_101702051	3300006058	Populus Rhizosphere	GVSRRAYRRAYRSDAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSSAPYGVYASSYALACERLKSGYADPYGPIFY*
Ga0075428_1001020611	3300006844	Populus Rhizosphere	SLASAEAQERPLTATSVAGVSRRAYRRAYRSDAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0075421_1011313823	3300006845	Populus Rhizosphere	GVSRRAYRRAYRSAAYTSAAGYGSGSHSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0075433_103534901	3300006852	Populus Rhizosphere	VHRRAYRRAAYGTAVAGSGGYGYSPPAYSSYWIPYGTSYAAPYGIYSSSYAIAHERLKSGYADPYGPIFY*
Ga0075434_1016862362	3300006871	Populus Rhizosphere	LSLASAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYTGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0114129_117512341	3300009147	Populus Rhizosphere	YGSGSYSGYGCPAYSNYWVPYGTSSSAPYGVYASSYALACERLKSGYADPYGPIFY*
Ga0075423_119581422	3300009162	Populus Rhizosphere	DSAEAQERPLTATSVAGVSRRAYRRAHRGAAYASAAGYGLYSGYGCPASNNYWVPYGTSFSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0105249_111953711	3300009553	Switchgrass Rhizosphere	YRRAYGSAPYAAGYGSGLYSRYGCPASSSYWIPYGTSWTAPYGISASSYAQACERLKSGYAAPYGPIFY*
Ga0126374_114017711	3300009792	Tropical Forest Soil	RAYRRAYRSPAYASAAGYGSGLYSGYGCPASNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0126380_114162572	3300010043	Tropical Forest Soil	VAGVSRRAYRRAYRSAAYARAAGYGSGLYSGYECPAYSSYWVPYGTSSSAPYGIYSSSYAIACERLKSGYAAPYGPIFY*
Ga0126384_106594071	3300010046	Tropical Forest Soil	ERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0126382_109366061	3300010047	Tropical Forest Soil	VTLSLASAEAQERPLTATSVAGVSRRAYRRAYRSAAYARAAGYGSGLYSGYGCPAYSSYWVPYGTSSSAPYGIYASSYAQACERLKSGYAAPYGPIFY*
Ga0126382_112524091	3300010047	Tropical Forest Soil	VRQLGAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERL
Ga0126373_103575832	3300010048	Tropical Forest Soil	VRLALRAFRRQLVRQLGAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY*
Ga0126373_122526571	3300010048	Tropical Forest Soil	GVSRRAYRRAYRSAAYASAAGYGYGSYSGYGCPVYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIIY*
Ga0126373_131803531	3300010048	Tropical Forest Soil	RAYRSPAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPWGVYASSFAMACERVKSGYAAPYGPIFY*
Ga0134071_105835501	3300010336	Grasslands Soil	RAYRSAAYASAAGYGSGLYSGYGCPAYSSYWLPYGRSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0126370_110106441	3300010358	Tropical Forest Soil	RSAAYARAAGYGSGLDSGYGCPAYSSYWVPYGTSAAAPYGIAASSYAIACERLKSGYAAPNGSIFY*
Ga0126376_125507601	3300010359	Tropical Forest Soil	RRAYRRAYRSAAYARVAGYGSGLDSGYGCPAYSSYWVPYGTSSAAPYGIAASSYAIACERLKSGYAAPNGPIFY*
Ga0126378_102546031	3300010361	Tropical Forest Soil	AHRSAAHASAAGYGSGLNSGYGCPASGYWVPYGTSSSAPWGVYASSFALACERVKSGYADPYGPIFY*
Ga0126378_105727852	3300010361	Tropical Forest Soil	VRLALRAFRRQLVRQLGAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLRAGYAAPYGPIFY*
Ga0126378_126102021	3300010361	Tropical Forest Soil	ARAAGYGSGLYSGYGCPAYSSYWVPYGTSSSAPYGIYSSSYAIACERLKSGYAAPYGPIFY*
Ga0126377_109698592	3300010362	Tropical Forest Soil	LSLASAEAQERPLTATSVAGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0126379_107286471	3300010366	Tropical Forest Soil	YRSAAYASAAGYGSGSYSGYGCPAHSNYWVPYGTSSSAPYGVYASSYALACERLKSGYADPYGPIFY*
Ga0134125_126059521	3300010371	Terrestrial Soil	AGHSRRAYRRAYRGATYAGAAGYGSGLSSGYGCPAYSSYWVPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY*
Ga0126381_1009749431	3300010376	Tropical Forest Soil	RPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLHSGYGYPAYSSYWIPYGTSYAAPYGVYSSSYAIAYERLRAGYAAPYGPIFY*
Ga0126381_1012432074	3300010376	Tropical Forest Soil	AGVSRRAYRRAYRSAAYARAAGYGSGLYSSYGCPAYSSYWVPYGTSSSAPYGIYSSSYAIACERLKSGYAAPYGPIFY*
Ga0126381_1032389512	3300010376	Tropical Forest Soil	LALRAFRRQLVRQLGAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY*
Ga0126383_114769181	3300010398	Tropical Forest Soil	VRLALRAFRRQLVRQLGAQERPLTATRVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERL
Ga0126383_114937811	3300010398	Tropical Forest Soil	SAAGYGSGLYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYALACERLKSGYAAPYGPIFY
Ga0126383_119917801	3300010398	Tropical Forest Soil	ATSAPGRRAYRRAAYGAAVAGSGGYGYSAPAYSNYWVPYGTSYAAPYGIYSSSYAIAHERLKSGYADPYGPIFY*
Ga0151489_14843161	3300011106	Soil	KAGTATSAAGVSRRAHRRAYRRAAYGTAAAGSGGYGYSSPAYSNYWIPYGTSYAAPYGIYSSSYAIAHERLKSGYAAPYGPIFY*
Ga0137364_105609291	3300012198	Vadose Zone Soil	TATSVAGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYPNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0137364_108097131	3300012198	Vadose Zone Soil	TATSVAGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0137382_106483522	3300012200	Vadose Zone Soil	TSVAGVSRRVHRRAYRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0137377_107531031	3300012211	Vadose Zone Soil	LTATSVAGVSRRVHRRAYRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSSYAIAYKRLQSGYAAPYGPIFY*
Ga0137360_116697031	3300012361	Vadose Zone Soil	ATSVAGVSRRVHRRAYRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSSYAIAYKRLQSGYAAPYGPIFY*
Ga0137361_110927191	3300012362	Vadose Zone Soil	YRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSSYAIAHERLQSGYAAPYGPIFY*
Ga0137358_101228481	3300012582	Vadose Zone Soil	RRAYRRAAYGTAVAGSGGYGYSSPAYSSYWIPYGTSYAAPYGIYSSSYAKAYKRLQSGYAAPYGPIFY*
Ga0137358_106537291	3300012582	Vadose Zone Soil	RRAYRRAAYGTAVAGSGGYGYSSPAYSSYWIPYGTSYAAPYGVYSSSYAQACERLKSGYAAPYGPIFY*
Ga0137359_117852421	3300012923	Vadose Zone Soil	YRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSSYAKAYKRLQSGYAAPYGPIFY*
Ga0126375_103413701	3300012948	Tropical Forest Soil	RAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0164301_108300492	3300012960	Soil	VVLSLAGAEAQERPLTATSVAGHSRRAYRRAYRGATYAGAAGYGSGLSSGYGCPAYSSYWVPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY*
Ga0126369_115872392	3300012971	Tropical Forest Soil	YRRAYRSPAYARAAGYGSGLYSGYGCPASSYWVPYGTSSSAPWGVYASSFAMACERVKSGYADPYGPIFY*
Ga0126369_130234261	3300012971	Tropical Forest Soil	SAAYARAGGYGSGLDSGYGCPAYSNYWIPYGTSAAAPYGIAASSYAIACERLKSGYAAPNGPIFY*
Ga0134087_108141931	3300012977	Grasslands Soil	RRAYRSDAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY*
Ga0182036_100497361	3300016270	Soil	PLTATSVAGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0182041_115377082	3300016294	Soil	VAGVSRRAYRRAYRSAAYASVAGYGSGFYSGYGCPTNSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAASYGPIFY
Ga0182041_116423662	3300016294	Soil	HRRAYRRAAYGTAVAGSGGYGYSPPTYSNYWIPYGTSYAAPYGVYSSSYAIAHERLKSGYAAPYGPIFY
Ga0182033_106615812	3300016319	Soil	AAYARAAGYGSGLYSGYGCPTYSSYWIPYGTGSSAPYGIAASSYAIACERLKSGYAAPYGPIFY
Ga0182033_115047601	3300016319	Soil	SAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0182035_113390881	3300016341	Soil	LDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASVAGYGSRFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0182032_102849981	3300016357	Soil	RAYRRAYRGAAYTSAAGYGSGLYSGYGCPVQSSYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0182032_115435182	3300016357	Soil	TSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY
Ga0182034_110703492	3300016371	Soil	VRLALRAFRRQLVRQLGAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTTYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY
Ga0182040_116336492	3300016387	Soil	AGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAASYGPIFY
Ga0182037_116191091	3300016404	Soil	LSLASAEAQERPLTATSVAGASRRARRRAYRSPAYASAAGYGSGSYSGYECPASNYWVPYGTSSSAPYGIYASSYGIACERLKSGYAAPYGPIFY
Ga0182037_120746491	3300016404	Soil	AYARVAGYGSRFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0182038_115724811	3300016445	Soil	AGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0182038_119453131	3300016445	Soil	LDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASVAGYGSGFYSGYGCPTNSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAASYGPIFY
Ga0126371_122454961	3300021560	Tropical Forest Soil	RAHRRAYRSAAYASAAGYGSGSYSGYGCPAHSNYWVPYGTSSSAPYGVYASSYALACERLKSGYADPYGPIFY
Ga0242676_10490081	3300022512	Soil	DLALSLASAEAQERPLTATSVAGLSRRAYRRAYRSATYAGAAGYGSGLYSGYGCPAYSSYWVPYGTSWSAPYGISASSYAQACERLKSGYAAPYGPIFY
Ga0242665_103631732	3300022724	Soil	LDSAEAREGRPLTHPRAHRRAVYGTAVAGSGGYGYSSPAYSSYWIPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY
Ga0242654_102310622	3300022726	Soil	TATSVAGHSRRAYRRAYRGATYAGAAGYGSGLSSGYGCPAYSSYWVPYGTSWSAPYGISAGSYAQACERLKSGYAAPYGPIFY
Ga0209055_11789321	3300026309	Soil	VTLSLASAEAQERPLAATSVAGVSRRAYRRAYRSDAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0209239_12271232	3300026310	Grasslands Soil	RAYRSAAYTSAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGVYASSYAIACERLKSGYAAPYGPIFY
Ga0209325_10033503	3300027050	Forest Soil	RRAYRRAYRSAAYASAAGYGHGSYSGHGYPADSSYWIPYGTSYAAPYGVYSSSYAIAHERLKSGYADPYGPIFY
Ga0138301_18521751	3300031022	Soil	GRRVHRRAYRRAYRSAAYASAAGYGHGLYSGYGYPAYSSYYIPYGTSYAAPYGIYSSSYAKAYKRLQSGYAAPYGPIFY
Ga0318516_101410523	3300031543	Soil	PYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0318538_106728492	3300031546	Soil	YRSAAYASVAGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318538_107426691	3300031546	Soil	AYASAAGYGYGSYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318571_100164721	3300031549	Soil	RAYRRAAYGNAVAGSGGYGYSPPAYSNYWVPYGTSYAAPYGIYSSSYAIAHERLKSGYADPYGPIFY
Ga0318555_100286377	3300031640	Soil	YRSAAYASAAGYGNGLYSGYSSPAYSSYWIPYGTSYAAPYGIYASSYAIAYERLRAGYAAPYGPIFY
Ga0318496_106221071	3300031713	Soil	AGTATSAPGVSRRVHRRAYRRAAYGAAVAGSGGYGYSSPAYSNYWIPYGTSYAAPYGIYSSSYAIAHERLKSGYADPYGPIFY
Ga0307469_106508691	3300031720	Hardwood Forest Soil	PRTAANCDERCRCQKNRRAYGSAPYAAGYDSGLYSSYGCPAYSSYWVPYGTSWSAPYGVSASSYTQACERLKSGYAAPYGPIFY
Ga0318500_102582541	3300031724	Soil	QKGARPYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318500_104306001	3300031724	Soil	AYRSAAYASAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318535_100437631	3300031764	Soil	YTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318554_107284271	3300031765	Soil	AYRRAYRSAAYARAAGYGSGLYSGYGCPTYSSYWIPYGTSSSAPYGIAASSYAIACERLKSGYAAPYGPIFY
Ga0318526_101145273	3300031769	Soil	SAAYASAAGYGNGLYSGYSSPAYSSYWIPYGTSYAAPYGIYASSYAIAYERLRAGYAAPYGPIFY
Ga0318547_104244961	3300031781	Soil	AYRSAAYASAAGYGNGLYSGYSSPAYSSYWIPYGTSYAAPYGIYASSYAIAYERLRAGYAAPYGPIFY
Ga0318497_106230881	3300031805	Soil	AYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0318568_100925695	3300031819	Soil	SPYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0310917_104050082	3300031833	Soil	RSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310917_110552671	3300031833	Soil	HRRAYRRAAYGTAVAGSGGYGYSPPAYSNYWVPYGTSYAAPYGVYSSSYAIARERLKSGYADPYGPIFY
Ga0318512_106106201	3300031846	Soil	PGVSRRVHRRAYRRAAYGAAVAGSGGYGYSSPAYSNYWIPYGTSYAAPYGIYSSSYAIAHERLKSGYADPYGPIFY
Ga0306919_101605781	3300031879	Soil	RAYRSAAYASAAGYGNGLYSGYSSPAYSSYWIPYGTSYAAPYGIYASSYAIAYERLRAGYAAPYGPIFY
Ga0306925_104532381	3300031890	Soil	SLASAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGYGSYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0306925_116321143	3300031890	Soil	SRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318522_101644581	3300031894	Soil	DSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318522_103146451	3300031894	Soil	NVGLSLDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPWDVYASSFAMACERVKSGYAAPYGPIFY
Ga0318520_101967401	3300031897	Soil	AGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318520_103395602	3300031897	Soil	ASAAGYGYGSYSGYGCPAYSNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIF
Ga0306921_107431271	3300031912	Soil	VRLALRAFRRQLVRQLGAQERPLTATSVAGVSRRAYRHAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY
Ga0310912_112876211	3300031941	Soil	GLSLDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASVAGYSSGCPTYSSYWVPYGTSSVAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310916_104764221	3300031942	Soil	ATSVADVSRRAYRRAYRSPAYASAAGYGSGSYSGYGCPASNYWVPYGTSSSAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310913_109419861	3300031945	Soil	RSAAYASVAGYGSRFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310910_110085562	3300031946	Soil	AYRHAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY
Ga0306926_120208511	3300031954	Soil	YRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0318530_103899842	3300031959	Soil	GVSRRAYRRAYRSASYASVAGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0306922_106695781	3300032001	Soil	ATSVAGVSRRAYRRAYRSAAYASVAGYGSRFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310911_105425491	3300032035	Soil	RAYRRAYRSAAYASAAGYGSGSYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318559_102651611	3300032039	Soil	GVSPYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0318575_104636281	3300032055	Soil	KGARPYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318533_112661442	3300032059	Soil	AKAGTATSAAGGSRKGHRRAYRRAAYGTAVAGSGGYGYSPPAYSNYWVPYGTSYAAPYGVYSSSYAIARERLKSGYADPYGPIFY
Ga0318504_100279511	3300032063	Soil	NVALSLASDATSVAGVSRRAYRRAYRSAAYTSAAGYGSGLYSGYGCPAYSNYWVPYGTSSAAPYGIYASSYAKACERLKSGYAAPYGPIFY
Ga0306924_107217031	3300032076	Soil	SLDSAEAQERPLTATSVAGVSRRAYRRAYRSAAYASVAGYGSGFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0318540_104290851	3300032094	Soil	AYARAAGYGSGLYSGYGCPASSYWVPYGTSSSAPWGVYASSFAMACERVKSGYAAPYGPIFY
Ga0306920_1010649842	3300032261	Soil	NVTLSLASAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLKSGYAAPYGPIFY
Ga0306920_1023593271	3300032261	Soil	LDGAEAQERPLTATSVAGVSRRAYRRAYRSAAYASAAGYGSGLYSGYGCPASSYWVPYGTSSSAPFGIYASSYAIACERLKSGYAAPYGPIFY
Ga0306920_1041864311	3300032261	Soil	ATSVAGVSRRAYRRAYRSAAYASVAGYSSGCPTYSSYWVPYGTSSVAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310914_104624133	3300033289	Soil	AEAQERPLTATSVAGVSRRAYRRAYRSAAYASVAGYGSRFYSGYGCPTYSSYWVPYGTSSAAPYGIYASSYAIACERLKSGYAAPYGPIFY
Ga0310914_116625811	3300033289	Soil	VRLALRAFRRQLVRQLGAQERPLTATRVAGVSRRAYRRAYRSAAYASAAGYGNGLYSGYSSPAYSSYYLPYGTSYAAPYGIYASSYAIAYERLRAGYAAPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054658

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences