Basic Information | |
---|---|
Family ID | F054680 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 139 |
Average Sequence Length | 45 residues |
Representative Sequence | MSKKAPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 139 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 55.34 % |
% of genes near scaffold ends (potentially truncated) | 22.30 % |
% of genes from short scaffolds (< 2000 bps) | 52.52 % |
Associated GOLD sequencing projects | 81 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (76.259 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (33.813 % of family members) |
Environment Ontology (ENVO) | Unclassified (62.590 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (89.209 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 30.56% β-sheet: 0.00% Coil/Unstructured: 69.44% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
Powered by PDBe Molstar |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 139 Family Scaffolds |
---|---|---|
PF01764 | Lipase_3 | 27.34 |
PF13578 | Methyltransf_24 | 23.74 |
PF03851 | UvdE | 2.88 |
PF10263 | SprT-like | 2.16 |
PF00881 | Nitroreductase | 1.44 |
PF00565 | SNase | 1.44 |
PF03462 | PCRF | 0.72 |
PF06831 | H2TH | 0.72 |
PF13394 | Fer4_14 | 0.72 |
PF13187 | Fer4_9 | 0.72 |
PF13489 | Methyltransf_23 | 0.72 |
PF01370 | Epimerase | 0.72 |
PF01149 | Fapy_DNA_glyco | 0.72 |
PF07103 | DUF1365 | 0.72 |
PF02348 | CTP_transf_3 | 0.72 |
PF13759 | 2OG-FeII_Oxy_5 | 0.72 |
PF05118 | Asp_Arg_Hydrox | 0.72 |
COG ID | Name | Functional Category | % Frequency in 139 Family Scaffolds |
---|---|---|---|
COG4294 | UV DNA damage repair endonuclease | Replication, recombination and repair [L] | 2.88 |
COG0266 | Formamidopyrimidine-DNA glycosylase | Replication, recombination and repair [L] | 1.44 |
COG0216 | Protein chain release factor RF1 | Translation, ribosomal structure and biogenesis [J] | 0.72 |
COG1083 | CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family | Cell wall/membrane/envelope biogenesis [M] | 0.72 |
COG1186 | Protein chain release factor PrfB | Translation, ribosomal structure and biogenesis [J] | 0.72 |
COG1212 | CMP-2-keto-3-deoxyoctulosonic acid synthetase | Cell wall/membrane/envelope biogenesis [M] | 0.72 |
COG1861 | Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family | Cell wall/membrane/envelope biogenesis [M] | 0.72 |
COG3496 | Uncharacterized conserved protein, DUF1365 family | Function unknown [S] | 0.72 |
COG3555 | Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily | Posttranslational modification, protein turnover, chaperones [O] | 0.72 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 76.26 % |
All Organisms | root | All Organisms | 23.74 % |
Visualization |
---|
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 33.81% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 16.55% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 6.47% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 5.76% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 5.04% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 5.04% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 4.32% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 3.60% |
Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 2.88% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 2.16% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 2.16% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment | 2.16% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 1.44% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 1.44% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 0.72% |
Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.72% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.72% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.72% |
Marine | Environmental → Aquatic → Marine → Inlet → Unclassified → Marine | 0.72% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.72% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.72% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.72% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment | 0.72% |
Fracking Water | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water | 0.72% |
Visualization |
---|
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
3300005239 | Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine | Environmental | Open in IMG/M |
3300005512 | Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water | Environmental | Open in IMG/M |
3300005611 | Saline surface water microbial communities from Etoliko Lagoon, Greece | Environmental | Open in IMG/M |
3300006025 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA | Environmental | Open in IMG/M |
3300006026 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA | Environmental | Open in IMG/M |
3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006867 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA | Environmental | Open in IMG/M |
3300006868 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA | Environmental | Open in IMG/M |
3300006869 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA | Environmental | Open in IMG/M |
3300006874 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA | Environmental | Open in IMG/M |
3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
3300007234 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA | Environmental | Open in IMG/M |
3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
3300007538 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG | Environmental | Open in IMG/M |
3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
3300007541 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG | Environmental | Open in IMG/M |
3300007542 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG | Environmental | Open in IMG/M |
3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
3300007960 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG | Environmental | Open in IMG/M |
3300008012 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA | Environmental | Open in IMG/M |
3300009000 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG | Environmental | Open in IMG/M |
3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
3300009193 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 | Environmental | Open in IMG/M |
3300009496 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 | Environmental | Open in IMG/M |
3300009508 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 | Environmental | Open in IMG/M |
3300010297 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA | Environmental | Open in IMG/M |
3300010299 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA | Environmental | Open in IMG/M |
3300010300 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA | Environmental | Open in IMG/M |
3300010316 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA | Environmental | Open in IMG/M |
3300010368 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA | Environmental | Open in IMG/M |
3300011258 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate | Environmental | Open in IMG/M |
3300012920 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG | Environmental | Open in IMG/M |
3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
3300012953 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome | Environmental | Open in IMG/M |
3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
3300017748 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21 | Environmental | Open in IMG/M |
3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
3300017763 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20 | Environmental | Open in IMG/M |
3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
3300017818 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017949 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017951 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017956 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017957 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017986 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018049 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018418 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018420 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018682 | Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1 | Environmental | Open in IMG/M |
3300019751 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG | Environmental | Open in IMG/M |
3300020165 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1 | Environmental | Open in IMG/M |
3300020194 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly) | Environmental | Open in IMG/M |
3300021364 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304 | Environmental | Open in IMG/M |
3300021365 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1 | Environmental | Open in IMG/M |
3300021379 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247 | Environmental | Open in IMG/M |
3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
3300021959 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D | Environmental | Open in IMG/M |
3300021964 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D | Environmental | Open in IMG/M |
3300022183 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3) | Environmental | Open in IMG/M |
3300022200 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3) | Environmental | Open in IMG/M |
3300023109 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG | Environmental | Open in IMG/M |
3300023110 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG | Environmental | Open in IMG/M |
3300023117 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG | Environmental | Open in IMG/M |
3300025120 | Marine viral communities from the Pacific Ocean - LP-28 (SPAdes) | Environmental | Open in IMG/M |
3300025610 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025630 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025636 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025647 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025653 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025687 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025803 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025822 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes) | Environmental | Open in IMG/M |
3300025828 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025840 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025890 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes) | Environmental | Open in IMG/M |
3300026138 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300027859 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes) | Environmental | Open in IMG/M |
3300028196 | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m | Environmental | Open in IMG/M |
3300034073 | Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL | Environmental | Open in IMG/M |
3300034375 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4) | Environmental | Open in IMG/M |
3300034418 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4) | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSpr2010_100112373 | 3300000116 | Marine | MSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKMKSK* |
DelMOSpr2010_100166549 | 3300000116 | Marine | MSKKSPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK* |
DelMOSpr2010_100173051 | 3300000116 | Marine | MKKSGVILKGEKIMSKKTPMMNGGKPKMQRKTDGLTPAQKKLPPA |
DelMOSpr2010_100336915 | 3300000116 | Marine | MSKKEPMMNKSKMQRKDDGLTPAQRKLPPALQAAILKKNKSK* |
DelMOSpr2010_101184632 | 3300000116 | Marine | MSKKEPMMNGGKPKMQRKTDGLTPAXXKLPPALQAAILKKMKSK* |
DelMOWin2010_100240181 | 3300000117 | Marine | MAKKSPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
DelMOWin2010_100581364 | 3300000117 | Marine | MAMHPKTKNGMKKNGMKNGKMQSKTNGLTAAQKKLPPALQAAILKKMKSK* |
DelMOWin2010_100830324 | 3300000117 | Marine | MSKKSPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0055584_1003890192 | 3300004097 | Pelagic Marine | MGKKAPIMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0073579_117033117 | 3300005239 | Marine | KEPMKKPPMKGQRKTNGLTPAQKKLPPALQAAILKKMKSK* |
Ga0074648_10259117 | 3300005512 | Saline Water And Sediment | MAMHKKNGKPMNGGKKNGKMQMKTDGLTAAQKKLPPALQAAILKSKKKK* |
Ga0074648_10264617 | 3300005512 | Saline Water And Sediment | MSKKTSMVNGGKPKMQRKDDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0074648_10647702 | 3300005512 | Saline Water And Sediment | MAMHKDKKSGKPMMGGKPKMQRKMDGLTPAQRKLPPALQAAILKKMKKSK* |
Ga0074647_100075626 | 3300005611 | Saline Water And Sediment | MAMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKKSK* |
Ga0075474_1000598110 | 3300006025 | Aqueous | MPMHKDKKSGNPMNGGKPKMQRKNDGLTPAQRKLPPALQAAIIKKMKSK* |
Ga0075474_100341174 | 3300006025 | Aqueous | MSKKAPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0075474_100828982 | 3300006025 | Aqueous | MSKKEPMMSGGKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0075478_100178972 | 3300006026 | Aqueous | MPMHKDKKSGNPMNGGKPKMQRKNDGLTPAQLKLPPALQAAIIKKMKSK* |
Ga0075478_100347322 | 3300006026 | Aqueous | MNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0070749_103505132 | 3300006802 | Aqueous | MSMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0070754_1000979811 | 3300006810 | Aqueous | MPMHKDKKSGNPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0075476_101327603 | 3300006867 | Aqueous | MMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0075481_102422762 | 3300006868 | Aqueous | MPMHKDKKSGNPMNGGKPKMQRKNDGLTPAQRKLPPALQAAIIKKMKSK*AGLITY* |
Ga0075477_103303832 | 3300006869 | Aqueous | RKIMSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0075475_102111802 | 3300006874 | Aqueous | MTMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0070750_102583892 | 3300006916 | Aqueous | MSKKSPMMNGGKAKMQRKQDGLTPAKKQLPPALQAAILKKMKSK* |
Ga0070750_104737411 | 3300006916 | Aqueous | KGGKMQRGKEEFSNGLTPAQRKLPPALQKAILKKKRK* |
Ga0070746_100701795 | 3300006919 | Aqueous | PMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0070746_102327021 | 3300006919 | Aqueous | MRKKTPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0075460_100262187 | 3300007234 | Aqueous | LVKEKKMPMHKDKKSGNPMNGGKPKMQRKNDGLTPAQRKLPPALQAAIIKKMKSK* |
Ga0075460_101874882 | 3300007234 | Aqueous | MMNGSKMQRKDDGLTPAQRKLPPALQAAILKKNKSK* |
Ga0070752_10709942 | 3300007345 | Aqueous | MSKKTPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0099851_10087588 | 3300007538 | Aqueous | MAMHKDKKSGNPMMNGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0099851_10567551 | 3300007538 | Aqueous | MAMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0099849_10555801 | 3300007539 | Aqueous | RPRKERKVIMAMHKDKKSGNPMMNGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0099848_10286095 | 3300007541 | Aqueous | MSMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0099846_10769971 | 3300007542 | Aqueous | RKIMSKKAPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0070751_12625544 | 3300007640 | Aqueous | MSKKSPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAIIKKM |
Ga0099850_10205931 | 3300007960 | Aqueous | KDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0099850_11223953 | 3300007960 | Aqueous | MSKKEPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKNKSK* |
Ga0075480_100165271 | 3300008012 | Aqueous | NGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0075480_102954012 | 3300008012 | Aqueous | MSKKEPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0102960_10059778 | 3300009000 | Pond Water | MSKKSPMMSGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0102960_10167965 | 3300009000 | Pond Water | MKKEPMKMQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0102963_10213323 | 3300009001 | Pond Water | MSKKSPMMNGGKAKMQRKQDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0102963_11549845 | 3300009001 | Pond Water | MAMHKDKKSGNPMSGGKPREKMQRKVDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0102963_12082971 | 3300009001 | Pond Water | KTPMMNKSKMQRKDDGLTPAQRKLPPALQAAILKKNKSK* |
Ga0115566_100089777 | 3300009071 | Pelagic Marine | MKKEPMKKPSMKGQRKTEGLTPAQKKLPPALQAAILKKMKSK* |
Ga0115551_10969643 | 3300009193 | Pelagic Marine | MMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0115570_100776611 | 3300009496 | Pelagic Marine | MGKKNPAMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0115570_101399351 | 3300009496 | Pelagic Marine | MSKKEPMMNGSKMKGQRKTDGLTPAQKKLPPALQA |
Ga0115570_101772234 | 3300009496 | Pelagic Marine | MKKEPMKKPSMKGQRKTEGLNPAQKKLPPALQAAILKKMKSK* |
Ga0115567_109555732 | 3300009508 | Pelagic Marine | MMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKS |
Ga0129345_10337267 | 3300010297 | Freshwater To Marine Saline Gradient | MTMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0129342_12859511 | 3300010299 | Freshwater To Marine Saline Gradient | MAMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0129351_10061279 | 3300010300 | Freshwater To Marine Saline Gradient | MTMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQKKLPPALQAALLKKMKSK* |
Ga0129351_10420091 | 3300010300 | Freshwater To Marine Saline Gradient | RKERKVIMAMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0136655_10315491 | 3300010316 | Freshwater To Marine Saline Gradient | GGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0136655_10519881 | 3300010316 | Freshwater To Marine Saline Gradient | MAMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0129324_101902682 | 3300010368 | Freshwater To Marine Saline Gradient | MAMHKVKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK* |
Ga0151677_10252605 | 3300011258 | Marine | MKKEPMKKPSMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0160423_102740253 | 3300012920 | Surface Seawater | MHKKNGNPMNGGKKMNGVKMQRKDDGLTPAQKKLPPALQAAILKAKKKK* |
Ga0160423_109455672 | 3300012920 | Surface Seawater | MHKKNGNPMNGGKKMNGVKMQRKDDGLTPAQKKLPPALQAAILKSKKNKK* |
Ga0160423_111586481 | 3300012920 | Surface Seawater | MGKKAPMMNGSKMNKENKMKGQRKTDGLTPAQKKLPPALQAAI |
Ga0163109_111648942 | 3300012936 | Surface Seawater | GMRGGMKKNGMKNGKMQNKMNGLTAAQKKLPPALQAAILKSKKKGK* |
Ga0163179_106596582 | 3300012953 | Seawater | MGKKAPMMNGSKMNKENKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK* |
Ga0181389_10098085 | 3300017746 | Seawater | MKKPPMKGQRKTNGLTPAQKKLPPALQAAILKKMKSK |
Ga0181393_10864692 | 3300017748 | Seawater | MGKKNPAMNGSKMKKDNKMKSQRKTDGLTPAQKKLPPALQA |
Ga0181405_10192814 | 3300017750 | Seawater | MMNGSKMKAQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0181410_10826392 | 3300017763 | Seawater | MGKKNPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0181423_13257822 | 3300017781 | Seawater | MGKKNPAMNGSKMKKDNKMKSQRKTDGLTPAQKKLPPALQAAILKKMKS |
Ga0181565_103465422 | 3300017818 | Salt Marsh | MNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181584_103577172 | 3300017949 | Salt Marsh | MSKKSPMMNGGKAKMQRKQDGLTPAQKKLPPALQAAILKKMKSK |
Ga0181584_104299624 | 3300017949 | Salt Marsh | MSKKTPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAILKKMKSK |
Ga0181577_101000803 | 3300017951 | Salt Marsh | VILKGDKMSKKAPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181577_106233012 | 3300017951 | Salt Marsh | MSKKSPMMSGGKPKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181580_102322481 | 3300017956 | Salt Marsh | MSKKSPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKM |
Ga0181580_105451242 | 3300017956 | Salt Marsh | MSKKEPMMSGGKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0181571_104497282 | 3300017957 | Salt Marsh | MSKKAPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181590_1002754511 | 3300017967 | Salt Marsh | MSKKSPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAIL |
Ga0181590_100826438 | 3300017967 | Salt Marsh | MSKKSPMMNGGKAKMQRKQDGLTPAQKKLPPALQAAILKK |
Ga0181590_103145432 | 3300017967 | Salt Marsh | MSKKTPMMNGGKSKMQRKDDGLTPAQRKLPPALQAAILKKMKSK |
Ga0181590_105572642 | 3300017967 | Salt Marsh | MSKKTPMMNGGRPKMQRKDDGLTPAQRKLPPALQAAIIKKMKSK |
Ga0181569_102239384 | 3300017986 | Salt Marsh | MSKKSPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181572_102649852 | 3300018049 | Salt Marsh | VISKGDKMSKKSPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181553_104331052 | 3300018416 | Salt Marsh | MKKEPMKMQRKTDGLTPAQKKLPPALQAAILKRMKSKNK |
Ga0181567_100157912 | 3300018418 | Salt Marsh | VILKGEEMSKKAPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0181567_109274553 | 3300018418 | Salt Marsh | MSKKSPMMSGSKSKMQHKNDGLTPAQKKLPPALQAAILKKKKKK |
Ga0181563_102497483 | 3300018420 | Salt Marsh | MSKKSPMMNKSKMQRKDDGLTPAQRKLPPALQAAILKKNKSK |
Ga0181591_110766353 | 3300018424 | Salt Marsh | MSKKSPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0188851_10094595 | 3300018682 | Freshwater Lake | MAKHSMMGKEPMMKKDKAKGKTMALTAAQKKLPPALQAAILKKMKK |
Ga0194029_10079583 | 3300019751 | Freshwater | MAKKSPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0206125_100074594 | 3300020165 | Seawater | MGKKAPIMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0206125_100414444 | 3300020165 | Seawater | MKKEPMKKPSMKGQRKTEGLTPAQKKLPPALQAAILKKMKSK |
Ga0181597_101671465 | 3300020194 | Salt Marsh | MSKKSPMMNGGKAKMQRKQDGLTPAQKKLPPALQAAILKKM |
Ga0213859_1000020233 | 3300021364 | Seawater | MPMQKNKKAMNGKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0206123_101840612 | 3300021365 | Seawater | MGKKNPAMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0213864_100022427 | 3300021379 | Seawater | MSKKSPMMNGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0213866_103297592 | 3300021425 | Seawater | MSKKEPMMNKSKMQRKDDGLTPAQRKLPPALQAAILKKNKSK |
Ga0222717_1000004862 | 3300021957 | Estuarine Water | MKKEPMKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0222718_100273458 | 3300021958 | Estuarine Water | MPMHKNKKPMNGKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0222718_100404422 | 3300021958 | Estuarine Water | MSKKSPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0222718_102002943 | 3300021958 | Estuarine Water | MSMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0222718_103139802 | 3300021958 | Estuarine Water | MSKKSPMMSGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0222718_103926962 | 3300021958 | Estuarine Water | MPMHKDKKSGNPMMNGGKPKMQRKTDGLTPAQRKLPPALQAAILKKMKKS |
Ga0222716_101417283 | 3300021959 | Estuarine Water | MMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0222716_105915721 | 3300021959 | Estuarine Water | KIMSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKMKKSK |
Ga0222719_103782903 | 3300021964 | Estuarine Water | MSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKSK |
Ga0196891_10428211 | 3300022183 | Aqueous | MSKKAPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAILKKMKSK |
Ga0196901_10615992 | 3300022200 | Aqueous | MAMHKDKKSGNPMMNGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0196901_12461811 | 3300022200 | Aqueous | KKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
(restricted) Ga0233432_102011272 | 3300023109 | Seawater | MSKKEPMMNKSKMKGQRKTDGLTPAQKKLPPALQAAILKKIKSK |
Ga0255743_103973071 | 3300023110 | Salt Marsh | SKKAPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSK |
Ga0255743_104741351 | 3300023110 | Salt Marsh | VILKGDKMSKKAPMMNKSKMQRKDDGLTPAQRKLPPALQAAIIKKNKSKXV |
Ga0255757_103390822 | 3300023117 | Salt Marsh | LKGDNMSKKEPMMSGGKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0209535_100050210 | 3300025120 | Marine | MGKKAPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208149_10508652 | 3300025610 | Aqueous | MPMHKDKKSGNPMNGGKPKMQRKNDGLTPAQLKLPPALQAAIIKKMKSK |
Ga0208004_10266951 | 3300025630 | Aqueous | MSKKAPMMNGGKPKMQRKDDGLTPAQRKLPPALQAAIIKKMKSK |
Ga0209136_11397081 | 3300025636 | Marine | MSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKMKKSK |
Ga0208160_10722425 | 3300025647 | Aqueous | MSKKSPMMNGGKPKMQRKQDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208428_11326842 | 3300025653 | Aqueous | MMNGGKPKMQRKKDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208162_10296411 | 3300025674 | Aqueous | RKARKIMSKKSPMMNGGKAKMQRKQDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208162_11156461 | 3300025674 | Aqueous | ERPRKERKVIMAMHKDKKSGNPMMNGGKPKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208019_10051264 | 3300025687 | Aqueous | MAMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0208019_10198941 | 3300025687 | Aqueous | MTMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMK |
Ga0208019_11030962 | 3300025687 | Aqueous | MTMHKDKKSGNPMMNGGKPREKMQRKMDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208019_11108152 | 3300025687 | Aqueous | MNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKNKSK |
Ga0208425_10616412 | 3300025803 | Aqueous | KGGKMQRGKEEFSNGLTPAQRKLPPALQKAILKKKRK |
Ga0209714_10693311 | 3300025822 | Pelagic Marine | SKKSPMMNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208547_10414435 | 3300025828 | Aqueous | MTMHKDKKSGNPMMNGGKPKMQRKKDGLTPAQRKLPPALQAAILKKMKSK |
Ga0208547_11035862 | 3300025828 | Aqueous | MPMHKDKKSGNPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0208917_10513732 | 3300025840 | Aqueous | MSKKAPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0209631_104933072 | 3300025890 | Pelagic Marine | KPPMKGQRKTNGLTPAQKKLPPALQAAILKKMKSK |
Ga0209951_10808152 | 3300026138 | Pond Water | MNGSKMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0209503_106728861 | 3300027859 | Marine | MGKKNPAMNGSKMKSQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0257114_10290742 | 3300028196 | Marine | MKKEPMKKPSMKGQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0310130_0009126_2728_2844 | 3300034073 | Fracking Water | MAKKPMKTKKDNGLTPAQKKLPAALQAAILKKKKANGS |
Ga0348336_156123_501_659 | 3300034375 | Aqueous | VILKGEKIMSKKTPMMNGGKPKMQRKTDGLTPAQKKLPPALQAAILKKMKSK |
Ga0348337_026324_5_118 | 3300034418 | Aqueous | MNGGKPKMQRKNDGLTPAQRKLPPALQAAIIKKMKSK |
⦗Top⦘ |