Metagenome / Metatranscriptome Family F054710

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054710
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	53 residues
Representative Sequence	LAARAAREKEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA
Number of Associated Samples	126
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	82.01 %
% of genes from short scaffolds (< 2000 bps)	79.14 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.079 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.950 % of family members)
Environment Ontology (ENVO)	Unclassified (28.777 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.007 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.57% β-sheet: 0.00% Coil/Unstructured: 54.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF10502	Peptidase_S26	10.07
PF03551	PadR	2.16
PF02861	Clp_N	2.16
PF00106	adh_short	1.44
PF00005	ABC_tran	1.44
PF01850	PIN	1.44
PF14269	Arylsulfotran_2	1.44
PF01425	Amidase	1.44
PF04149	DUF397	0.72
PF14520	HHH_5	0.72
PF00398	RrnaAD	0.72
PF06736	TMEM175	0.72
PF00078	RVT_1	0.72
PF04075	F420H2_quin_red	0.72
PF06983	3-dmu-9_3-mt	0.72
PF01522	Polysacc_deac_1	0.72
PF03133	TTL	0.72
PF01751	Toprim	0.72
PF08327	AHSA1	0.72
PF00589	Phage_integrase	0.72
PF00144	Beta-lactamase	0.72
PF13613	HTH_Tnp_4	0.72
PF13560	HTH_31	0.72
PF02151	UVR	0.72
PF04672	Methyltransf_19	0.72
PF11716	MDMPI_N	0.72
PF01548	DEDD_Tnp_IS110	0.72
PF08734	GYD	0.72
PF04185	Phosphoesterase	0.72
PF05685	Uma2	0.72
PF01791	DeoC	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.16
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.16
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.16
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.16
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.44
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.72
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.72
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.72
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.72
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.72
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.08 %
Unclassified	root	N/A	48.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.08 %
Unclassified	root	N/A	48.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.08 %
Unclassified	root	N/A	48.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.09 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	14.39 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.63 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.44 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.44 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.72 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.63 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.72 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.72 %
Pseudarthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter	0.72 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.72 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.72 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.63 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.72 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.72 %
unclassified Pseudarthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → unclassified Pseudarthrobacter	0.72 %
Kitasatospora paracochleata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora paracochleata	0.72 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.72 %
Streptacidiphilus fuscans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	0.72 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.63 %
Nocardia sp. CS682	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	0.72 %
Pseudarthrobacter sp. AG30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → unclassified Pseudarthrobacter → Pseudarthrobacter sp. AG30	0.72 %
Actinomadura sp. K4S16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	0.72 %
Kitasatospora paracochleata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora paracochleata	0.72 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.72 %
Streptacidiphilus fuscans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	0.72 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ01EG4WI	Not Available	528	Open in IMG/M
3300001593\|JGI12635J15846_10287513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1035	Open in IMG/M
3300004152\|Ga0062386_100016037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5404	Open in IMG/M
3300004629\|Ga0008092_11322492	Not Available	645	Open in IMG/M
3300005176\|Ga0066679_10241376	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005177\|Ga0066690_10658904	Not Available	696	Open in IMG/M
3300005179\|Ga0066684_10421236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	897	Open in IMG/M
3300005330\|Ga0070690_100587970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	843	Open in IMG/M
3300005332\|Ga0066388_104136070	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005336\|Ga0070680_101481800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	588	Open in IMG/M
3300005435\|Ga0070714_102353573	Not Available	518	Open in IMG/M
3300005436\|Ga0070713_100168110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1962	Open in IMG/M
3300005436\|Ga0070713_101754018	Not Available	602	Open in IMG/M
3300005439\|Ga0070711_100419188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1090	Open in IMG/M
3300005440\|Ga0070705_101416351	Not Available	580	Open in IMG/M
3300005454\|Ga0066687_10655296	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005458\|Ga0070681_11393504	Not Available	625	Open in IMG/M
3300005548\|Ga0070665_102584030	Not Available	509	Open in IMG/M
3300005718\|Ga0068866_10210462	Not Available	1167	Open in IMG/M
3300005841\|Ga0068863_102342276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005842\|Ga0068858_101500562	Not Available	665	Open in IMG/M
3300006028\|Ga0070717_11284398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300006796\|Ga0066665_10377901	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006804\|Ga0079221_11410700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300006854\|Ga0075425_100676622	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300006914\|Ga0075436_100849456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300009137\|Ga0066709_100620257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1543	Open in IMG/M
3300009137\|Ga0066709_104356716	Not Available	516	Open in IMG/M
3300009143\|Ga0099792_10168925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300009520\|Ga0116214_1285989	Not Available	630	Open in IMG/M
3300009545\|Ga0105237_11761129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300009683\|Ga0116224_10497014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	581	Open in IMG/M
3300010360\|Ga0126372_10428043	Not Available	1218	Open in IMG/M
3300010366\|Ga0126379_13265465	Not Available	543	Open in IMG/M
3300010373\|Ga0134128_11387020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	774	Open in IMG/M
3300010375\|Ga0105239_10934731	Not Available	996	Open in IMG/M
3300010868\|Ga0124844_1072672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1270	Open in IMG/M
3300010937\|Ga0137776_1663045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → unclassified Pseudarthrobacter → Pseudarthrobacter sp. AG30	955	Open in IMG/M
3300011270\|Ga0137391_10030793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4501	Open in IMG/M
3300011270\|Ga0137391_11555819	Not Available	505	Open in IMG/M
3300012096\|Ga0137389_10009738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6349	Open in IMG/M
3300012206\|Ga0137380_10673301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300012349\|Ga0137387_10057899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2606	Open in IMG/M
3300012351\|Ga0137386_10331198	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300012357\|Ga0137384_11168026	Not Available	614	Open in IMG/M
3300012358\|Ga0137368_10582097	Not Available	713	Open in IMG/M
3300012363\|Ga0137390_11661047	Not Available	575	Open in IMG/M
3300012948\|Ga0126375_11625665	Not Available	557	Open in IMG/M
3300012955\|Ga0164298_10606618	Not Available	752	Open in IMG/M
3300012987\|Ga0164307_10238689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1261	Open in IMG/M
3300013104\|Ga0157370_10138749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2265	Open in IMG/M
3300013104\|Ga0157370_10576461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300013105\|Ga0157369_10995492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300013307\|Ga0157372_13153683	Not Available	526	Open in IMG/M
3300014969\|Ga0157376_11125261	Not Available	812	Open in IMG/M
3300014969\|Ga0157376_11158328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	800	Open in IMG/M
3300016319\|Ga0182033_10319808	Not Available	1287	Open in IMG/M
3300016341\|Ga0182035_11739200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora paracochleata	564	Open in IMG/M
3300017792\|Ga0163161_10298005	Not Available	1269	Open in IMG/M
3300017930\|Ga0187825_10285215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	612	Open in IMG/M
3300017932\|Ga0187814_10025222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2223	Open in IMG/M
3300017932\|Ga0187814_10293245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300017933\|Ga0187801_10366706	Not Available	594	Open in IMG/M
3300017943\|Ga0187819_10339267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300017955\|Ga0187817_10372233	Not Available	911	Open in IMG/M
3300017959\|Ga0187779_10235403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1155	Open in IMG/M
3300017970\|Ga0187783_10570910	Not Available	819	Open in IMG/M
3300017974\|Ga0187777_10597334	Not Available	777	Open in IMG/M
3300017975\|Ga0187782_10903300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300018085\|Ga0187772_10555678	Not Available	813	Open in IMG/M
3300018088\|Ga0187771_10845120	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300021170\|Ga0210400_10323904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1267	Open in IMG/M
3300021170\|Ga0210400_10746188	Not Available	804	Open in IMG/M
3300021171\|Ga0210405_11438384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	501	Open in IMG/M
3300021178\|Ga0210408_10236437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1454	Open in IMG/M
3300021180\|Ga0210396_11718417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	509	Open in IMG/M
3300021377\|Ga0213874_10164499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300021420\|Ga0210394_10875897	Not Available	782	Open in IMG/M
3300021439\|Ga0213879_10249181	Not Available	537	Open in IMG/M
3300021478\|Ga0210402_10485382	Not Available	1147	Open in IMG/M
3300021478\|Ga0210402_11078280	Not Available	730	Open in IMG/M
3300021559\|Ga0210409_10930331	Not Available	743	Open in IMG/M
3300021560\|Ga0126371_10346478	Not Available	1620	Open in IMG/M
3300025904\|Ga0207647_10639370	Not Available	584	Open in IMG/M
3300025915\|Ga0207693_10994432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	641	Open in IMG/M
3300025917\|Ga0207660_11134129	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300025918\|Ga0207662_10769290	Not Available	678	Open in IMG/M
3300025921\|Ga0207652_10527898	Not Available	1062	Open in IMG/M
3300025927\|Ga0207687_11081177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	689	Open in IMG/M
3300025928\|Ga0207700_10134507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2023	Open in IMG/M
3300025928\|Ga0207700_10914483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300025929\|Ga0207664_10206451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300025960\|Ga0207651_11818352	Not Available	548	Open in IMG/M
3300026041\|Ga0207639_10492819	Not Available	1118	Open in IMG/M
3300026118\|Ga0207675_100611524	Not Available	1093	Open in IMG/M
3300026446\|Ga0257178_1011304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300026557\|Ga0179587_10650936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300027812\|Ga0209656_10115803	Not Available	1387	Open in IMG/M
3300027824\|Ga0209040_10047957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2590	Open in IMG/M
3300028047\|Ga0209526_10127410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1788	Open in IMG/M
3300028379\|Ga0268266_11888895	Not Available	571	Open in IMG/M
3300029943\|Ga0311340_11272712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	588	Open in IMG/M
3300030007\|Ga0311338_10337135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1647	Open in IMG/M
3300030013\|Ga0302178_10373270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	641	Open in IMG/M
3300030503\|Ga0311370_11831546	Not Available	615	Open in IMG/M
3300031028\|Ga0302180_10555068	Not Available	557	Open in IMG/M
3300031544\|Ga0318534_10026732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3115	Open in IMG/M
3300031561\|Ga0318528_10005825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5352	Open in IMG/M
3300031564\|Ga0318573_10395967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300031744\|Ga0306918_10378867	Not Available	1101	Open in IMG/M
3300031782\|Ga0318552_10292403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	828	Open in IMG/M
3300031819\|Ga0318568_10657518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	652	Open in IMG/M
3300031860\|Ga0318495_10438388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300032039\|Ga0318559_10515302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300032090\|Ga0318518_10399485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300032174\|Ga0307470_11744997	Not Available	525	Open in IMG/M
3300032783\|Ga0335079_10727131	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300032829\|Ga0335070_10319497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300032896\|Ga0335075_10014383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11888	Open in IMG/M
3300033134\|Ga0335073_11728853	Not Available	589	Open in IMG/M
3300033158\|Ga0335077_11226944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.86%
Host-Associated	Host-Associated	20.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.94%
Plants	Host-Associated → Plants	20.14%
Aquatic	Environmental → Aquatic	7.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.67%
Freshwater	Environmental → Aquatic → Freshwater	6.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.76%
Peat	Environmental → Terrestrial → Peat	3.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Sediment	Environmental → Aquatic → Sediment	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.45%
Loam	Environmental → Terrestrial → Soil → Loam	17.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.16%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_11672140	2170459024	Grass Soil	RAAREKEWTETAAGRSSLAGELGRVAAELDRLRAVLREHGIDPGDDAA
JGI12635J15846_102875133	3300001593	Forest Soil	AAAATRDKEKQLLAARAAREKEWTQAAADRPPLASELDRVNAELERLRVILRGHGIDPGNDAA*
C688J18823_104214383	3300001686	Soil	WTEADAGRPSLASEFGRVNAELARLRAILREHGTDPGDDPA*
Ga0062386_1000160376	3300004152	Bog Forest Soil	MEGAERGGAADRQDFEVAAELRDKEQLRSARADRGKEWMETAADRRSLLQEFGRLNDELDRLRAVLREHGIEPGGDGA*
Ga0008092_113224921	3300004629	Tropical Rainforest Soil	EKQLLAARASREKEWTQAAAGRMPLAQELGQMKAELERLRASLREHGIEPGDDAA*
Ga0066679_102413763	3300005176	Soil	LASGLAGMEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAE*
Ga0066690_106589042	3300005177	Soil	SAALRDQEKQLLAARARQEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0066684_104212362	3300005179	Soil	RARQEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAE*
Ga0070690_1005879702	3300005330	Switchgrass Rhizosphere	LAARAAREREWTETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0066388_1041360701	3300005332	Tropical Forest Soil	EKEWMEAAAGRLPLAAEFGRVDAELDRLRAVLREHGIDPGDDAA*
Ga0070680_1014818001	3300005336	Corn Rhizosphere	AAALRDKETQLLAARAAREREWTEIAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0070671_1004938872	3300005355	Switchgrass Rhizosphere	VDQDVASGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0070714_1023535731	3300005435	Agricultural Soil	AARAAREKEWTEAGAGRPSLASEFGRVNAELARLRAILREHGTDPGDDPA*
Ga0070713_1001681104	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0070713_1017540182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DRQDFEAAAATRDKEKQLLAARADREKEWTRAVPGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0070711_1004191883	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IDRQDFEASAALRDQEKQLLAARARQEKERAGAGAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0070705_1014163511	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AARTAREKEWTEAAAGRPVLAGELGRVNAELDRLRAVLREHGIDPGDDPGDDAA*
Ga0066687_106552962	3300005454	Soil	VRQEKEWTEAAAGRMPLAQELGRVKAELDRLRASLREHDIAPGDDAA*
Ga0070681_113935041	3300005458	Corn Rhizosphere	ESQLLAARAAREREWTETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0070665_1025840302	3300005548	Switchgrass Rhizosphere	KEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA*
Ga0068866_102104623	3300005718	Miscanthus Rhizosphere	DKETQLLAARAAREREWTETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0068863_1023422761	3300005841	Switchgrass Rhizosphere	REREWTETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0068858_1015005621	3300005842	Switchgrass Rhizosphere	IDRQDFEAAAATRDKEKQLLAARADREKEWTQAVPGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0070717_112843981	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLGARAAREKEWMEAAAGRPSLAGELGRVNTELARLRAVLREHGIDPGNDAA*
Ga0070717_118419761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0066665_103779011	3300006796	Soil	LAARAGQEREWTEAAAGRVPLAQELGRVKAELEMLRAVLREHIGPGDDAA*
Ga0079221_114107002	3300006804	Agricultural Soil	RDQEKQLLAARARQEKERAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0075425_1006766223	3300006854	Populus Rhizosphere	LAARADREKEWTQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0075436_1008494561	3300006914	Populus Rhizosphere	AARARQEKERAGAGAGGVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0105247_108192242	3300009101	Switchgrass Rhizosphere	GPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0066709_1006202571	3300009137	Grasslands Soil	RAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAE*
Ga0066709_1043567161	3300009137	Grasslands Soil	RAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA*
Ga0099792_101689251	3300009143	Vadose Zone Soil	SVGLRDQEKQLLAARAGRDAEWAEAAAGRVPLAQELGRVKAELERLRGVLREHGIEPGDDAT*
Ga0116214_12859891	3300009520	Peatlands Soil	FEASAALRGKEKQLRVARAGREKESTDAAAGRMWLAAEFGRVNAELERLRAILREHGIGPRDDTA*
Ga0116218_14228791	3300009522	Peatlands Soil	VQAAADRPPLAGELDRVNAELDRLRVILREHGIDPGNDAA*
Ga0105237_117611291	3300009545	Corn Rhizosphere	ALRDKETQLLAARAAREREWTETAAERPPLAGELGRVNVELDRLRAILREHDIDPGDDAG
Ga0105249_121266682	3300009553	Switchgrass Rhizosphere	VTGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0116224_104970142	3300009683	Peatlands Soil	WTQAAAGRPPLASELDRVNAELDRLRVILREHGIDPGNDAA*
Ga0126372_104280431	3300010360	Tropical Forest Soil	LRDKDKDRLATKASREKEWTAAGSRPSLAGELARVNTELERLRALLREHGIEPGGGAA*
Ga0126379_132654651	3300010366	Tropical Forest Soil	MLGEQAAAALRDKETELLAARAAKEKEWTETAAGRPSLAGELGRVNTELDRLRAVLREHGIDPGDDAA*
Ga0134128_113870201	3300010373	Terrestrial Soil	DRQDFEAAAATRDKEKQLLAARADREKEWTQAVTGGPSLASELGRVNAELDRLRAILLEHGIDPGPGNDAA*
Ga0105239_109347311	3300010375	Corn Rhizosphere	LAARAAREKEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA*
Ga0105239_122563411	3300010375	Corn Rhizosphere	DVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0134127_101357123	3300010399	Terrestrial Soil	PSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0124844_10726723	3300010868	Tropical Forest Soil	RQDFEAAAALRDKERQLLAARTAREKEWTEAAAGRPSLAGELGRVNTELDRLRAVLREHGIDPGDDVA*
Ga0137776_16630453	3300010937	Sediment	LAARAGREKEWAEAAAGRMPLAQELGRVKAELERLRAVLREHGIAPSDDAA*
Ga0137391_100307931	3300011270	Vadose Zone Soil	AARTAREKEWTEAAAGRPSLAGELGRVNTELDRLRAVLREHGIDPGDDAA*
Ga0137391_115558191	3300011270	Vadose Zone Soil	AARTAREKEWTEAAAGRPSLAGELGRVNTELDRLRAVLREHSIDPGDDAA*
Ga0137389_1000973810	3300012096	Vadose Zone Soil	AARTAREKEWTEAAAGRPSLAGELGRVNTELDRLRAVSREHSIDPGDDAA*
Ga0137380_106733013	3300012206	Vadose Zone Soil	QLLAARAAREKEGAEPAAGRLSLARELGRVNAELARLRAIMREHGIPPGDDAA*
Ga0137387_100578991	3300012349	Vadose Zone Soil	GLRDKEKQLLAARAAREKDWTEAAAGRTPLAKEFGGLNTELERLRTILREHGIEPSDGDA
Ga0137386_103311982	3300012351	Vadose Zone Soil	RPSLAGELGRVNTELDRLRAVLREHGIDPGDDVA*
Ga0137384_111680261	3300012357	Vadose Zone Soil	LRDQETQLLAARAGQEKEWTEAAAGRLPLAQELGRVKAEMERLRAVLREYDIAPGDDAA*
Ga0137368_105820972	3300012358	Vadose Zone Soil	EKEWTEAAAGRPSLAGELGRVNTELDRLRAGLREHGSDAGDDAA*
Ga0137390_116610471	3300012363	Vadose Zone Soil	AARTAREKEWTEAAAGRPSLAGELGRVNTELDRLRAVLREHDIDPGDDAA*
Ga0126375_116256651	3300012948	Tropical Forest Soil	QMLGEQAAAALRDKETELLAARAAKEKEWTETAAGRPSLAGELGRVNTELDRLRAVLREHGIDPGDDVA*
Ga0164298_106066182	3300012955	Soil	GRPVLAGELGRVNTELDRLRAVLREHGIDPGDDVA*
Ga0164307_102386893	3300012987	Soil	AARVRQEKEWTEAAAGRMSLAQELGRVKAELDRLRASLREHDIAPGDDAA*
Ga0157370_101387491	3300013104	Corn Rhizosphere	QDFEAAAETRDKEKQLLAARADREKEWTQDVAGGRSLASELGRVNAELDRLRASLREHGIDPGPGNDAA*
Ga0157370_105764611	3300013104	Corn Rhizosphere	ARAAREREWTETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0157369_106236461	3300013105	Corn Rhizosphere	TQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0157369_109954922	3300013105	Corn Rhizosphere	TETAAERPPLAGELGRVNAELDRLRAILREHDIDPGDDAG*
Ga0157372_131536831	3300013307	Corn Rhizosphere	AATRDKEKQLLAARADREKEWTQAVTGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA*
Ga0157376_111252611	3300014969	Miscanthus Rhizosphere	AAQRDKEKQLLAARAAREKEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA*
Ga0157376_111583282	3300014969	Miscanthus Rhizosphere	LRDQEKQLLAARVRQEKEWTEAAAGRMSLAQELGRVKAELDRLRASLREHDIAPGDDAA*
Ga0182033_103198081	3300016319	Soil	ARAAREQEWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0182035_117392002	3300016341	Soil	EKQLLAARAAREQEWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0163161_102980052	3300017792	Switchgrass Rhizosphere	RDKEKQLLAARADREKEWTQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0187825_102852151	3300017930	Freshwater Sediment	EQAAVGRVPLARELARVRAEVDRLRAAMREHGIEPGDDPA
Ga0187814_100252221	3300017932	Freshwater Sediment	ARQDFEAAAALRDKEKELIAARAAREMEWTEAAAGRPSLARDFSRLQAELTRLRAILREHDIDPGDPPSQP
Ga0187814_102932452	3300017932	Freshwater Sediment	ALLAAAAREAREREWTEAAAGRLPMAKELDRVHSELKRLRAILREHGIEPGDDVA
Ga0187801_103667061	3300017933	Freshwater Sediment	QLLAARAGREKEWTEAAAGHLSLARELGRVNTELDRLRTILREHGIEPGDDA
Ga0187819_103392672	3300017943	Freshwater Sediment	DQEKQLRVGRAGGDKEWAEAAAGRVPLGQELARVKAELERLHAVLREHGIAPGDDAA
Ga0187817_103722331	3300017955	Freshwater Sediment	EAAAPLRDKEQELTAARAATEMEWTEAAADRPSLASEFGRVQAELTRLRAILRERDIDPGDASSQP
Ga0187779_102354031	3300017959	Tropical Peatland	AVDRQDFEAAVTLREKEKQLLAARAAREKEWTEAAAGRLPLAEELGRVNTELDRLRAILREHGIEPGDDA
Ga0187783_105709102	3300017970	Tropical Peatland	AAREMEWTEAAAARPSLAREFGRVQAELIRLRAILREDGIDQGDGA
Ga0187777_105973341	3300017974	Tropical Peatland	QDYEAAAALRDKENQLGAARATREAEWTEAAASRLSLARELGRVNSELEKLRAILREHGIDQGDGAA
Ga0187782_109033002	3300017975	Tropical Peatland	AELRNQEKQLLAAHAGREKEWAEAAADRMPLVQELGRVKAELDRLRAILREHGIEPGDDA
Ga0187772_105556782	3300018085	Tropical Peatland	MEWTEAAGGRPSLAAEFGRMNAELTRLRAIVREHGIDPGDGAAAN
Ga0187771_108451202	3300018088	Tropical Peatland	RDKEKELIAARTAREMEWTEAAGGRPSLAAEFGRMNAELTRLRAIVREHGIDPGDGAAAN
Ga0210400_103239044	3300021170	Soil	EKERAGAGAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0210400_107461881	3300021170	Soil	EKERAGAGAGAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDAA
Ga0210405_114383842	3300021171	Soil	QLLAARARQEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0210408_102364374	3300021178	Soil	GAGAGGVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0210396_117184172	3300021180	Soil	DRQDFEASAALRDQEKQLLAARARQEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0213874_101644992	3300021377	Plant Roots	EKQLLAARAAREKEGTEAAAARPALASELGRVNAELARLRAILREHGIDPGDDAA
Ga0210394_108758972	3300021420	Soil	EASVALRDQEKQLMAARASQENDSAEAAAGRMPLAQELALMKAEVARLRAAMREHGIGPGDDAA
Ga0213879_102491811	3300021439	Bulk Soil	AIDRDDFEVAVARRDEEKQGRTARAVREDEWTEADAGRLSLAGEFGRMNAELGRLRAILRENGIDPGDDPA
Ga0210402_104853822	3300021478	Soil	AGAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTA
Ga0210402_110782801	3300021478	Soil	GQDFELSAALRVQERQLLAARAGREKEWTEAAADRMPLAQELGRVKVELERLRAVLRDHDIAPGDDAA
Ga0210409_109303311	3300021559	Soil	AGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTA
Ga0126371_103464781	3300021560	Tropical Forest Soil	MLGEQAAAALRDKETELLAARAAKEKEWTETAAGRPSLAGELGRVNTELDRLRAVLREHGIDPGGDDAA
Ga0207692_110802442	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AARQDEWTDAGTGRLSLAGEFARMHAELGRLRAILREHGIDPGDDPA
Ga0207647_106393701	3300025904	Corn Rhizosphere	ARADREKEWTQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207693_109944322	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QDFEAAAALRDKEMQVLGARVAKEKEWTETAASGPSLAGELGRVTAELDRLRAVLREHGIDPGDDAV
Ga0207660_101370953	3300025917	Corn Rhizosphere	TQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207660_111341293	3300025917	Corn Rhizosphere	EWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA
Ga0207662_107692901	3300025918	Switchgrass Rhizosphere	RAAREKEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA
Ga0207652_105278982	3300025921	Corn Rhizosphere	AATRDKEKQLFAARADREKEWTQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207687_110811771	3300025927	Miscanthus Rhizosphere	DREKEWTQDVASGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207700_101345071	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EKRLRAARARQEKERAGAAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0207700_109144832	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RQDFESSAALRDQEKQLLAARVRQEKEWTEAAAGRMSLAQELGRVKAELDRLRASLREHDIAPGDDAA
Ga0207664_102064511	3300025929	Agricultural Soil	AAAGRVPLARELARVKAEVDRLRAAMREHGIDPGDDTE
Ga0207667_118169191	3300025949	Corn Rhizosphere	VDQDVASGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207651_118183521	3300025960	Switchgrass Rhizosphere	LAARADREKEWTQDVAGGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207639_104928192	3300026041	Corn Rhizosphere	RADREKEWTQDVASGPSLASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0207675_1006115242	3300026118	Switchgrass Rhizosphere	KEKQLFAARADREKEWTQDVAGGPSPASELGRVNAELDRLRAILREHGIDPGPGNDAA
Ga0257178_10113041	3300026446	Soil	AAALRDKETQLLGARTAREKEWTEAAAGRPPLAGELGRVNTELDRLRAVLREHGIDPGDDAA
Ga0179587_106509362	3300026557	Vadose Zone Soil	RDKEMQLLGARVAREEEWMEAAAGRPSLAGELGRVNTELDRLRAVLREHDIDPGDDAA
Ga0209420_11497512	3300027648	Forest Soil	QAAADRPPLASELDRVNAELERLRVILRGHGIDPGNDAA
Ga0209656_101158034	3300027812	Bog Forest Soil	AERGGAADRQDFEVAAELRDKEQLRSARADRGKEWMETAADRRSLLQEFGRLNDELDRLRAVLREHGIEPGGDGA
Ga0209040_100479572	3300027824	Bog Forest Soil	MEGAERGGAADRQDFEVAAELRDKEQLRSARADRGKEWMETAADRRSLLQEFGRLNDELDRLRAVLREHGIEPGGDGA
Ga0209698_112938812	3300027911	Watersheds	MQAAAGRPSLASEFGRVNAELARLRSILREHGIDPGNDAA
Ga0209526_101274103	3300028047	Forest Soil	ERAAAGQVSLARELGRLYAELDKLRAILREHGIDPGDDPA
Ga0268266_118888951	3300028379	Switchgrass Rhizosphere	LLAARAAREKEWTEAAAGRPPLAGELGQVNAELDRLRAVLREHGIDPGDDAA
Ga0307284_103176291	3300028799	Soil	AGRPSLAGEFGRVNAELERLRAILRQQGIEPGDGAA
Ga0307310_107264371	3300028824	Soil	DAGRLSLASEFARMNAELGRLRAILREHGIDPGDDPA
Ga0311340_112727122	3300029943	Palsa	LLAARAAREKEWTQAAADRPSLASELDRVNAELDRLRVILREHGIDPGNDAA
Ga0311338_103371353	3300030007	Palsa	ATRDKERQLLAARAAREKEWTQAAADRPSLASELDRVNAELDRLRVILREHGIDPGNDAA
Ga0302178_103732702	3300030013	Palsa	ARAAREKEWTQAAADRPSLASELDRVNAELDRLRVILREHGIDPGNDAA
Ga0311370_118315462	3300030503	Palsa	DKEKQLLAARAAREKEWTQAAADRPPLASELDRVNAELDRLRVILREHGIDTGNDAA
Ga0302180_105550681	3300031028	Palsa	RGKEKQLLAVRAAREKEWTQAAAGGPSLASELSRVNAELDRLRVILREHGIDPGNDAT
Ga0318534_100267321	3300031544	Soil	AAREQEWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0318528_100058253	3300031561	Soil	MHYEFNLVSREKEWAEAAAGRMPLVQELGLVKAELERLRASLREHGIEPGDDVA
Ga0318573_103959673	3300031564	Soil	VHSCSRAAREQEWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0306918_103788673	3300031744	Soil	ARAAREQEWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGA
Ga0318552_102924033	3300031782	Soil	WTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0318568_106575181	3300031819	Soil	LLTARASREKDWAEDAAGRISLAQELDQVKAELERLRASLREHGIEPGDDAA
Ga0318495_104383881	3300031860	Soil	QDFEVAAELRDKEQQLRAARADQEKEWTEAAADRRSLVQEFVRLNDELDRLRAILREHGIEPGGDGA
Ga0318559_105153022	3300032039	Soil	LTARAGRDKEWAEAAADRMPLAQELGRVKAEVARLRAILHEHGIAPGDDAA
Ga0306924_114028371	3300032076	Soil	AGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0318518_103994853	3300032090	Soil	EWTEGAAGRLPLAGELGRVNAELERLRATLREHGIDPGAGAA
Ga0311301_124368571	3300032160	Peatlands Soil	KESTDAAAGRLSLAAEFGRVNAELERLRAILREHGIGPRDDAA
Ga0307470_117449971	3300032174	Hardwood Forest Soil	AVALRDKETQLLAARAAREKEWTEPAAGRPALAGELGQVNAELDRLRAILREYGNDLGDDAS
Ga0335079_107271311	3300032783	Soil	AAAGRVPLAQELDRVKAELERLQAVLREHGIAPGDDAA
Ga0335070_103194971	3300032829	Soil	AALRDQEKQLLAARAGRDKEWAEAAAGRTPLAQELDRVKAELERLRAVLRERDIAPGDDA
Ga0335075_1001438313	3300032896	Soil	EKKAAITRFDFEAADALREKEKQLLAARSAWQREWTEPAASRLSLAHEFGRMNAELERLLAILHEQGIEPGGSPA
Ga0335073_117288531	3300033134	Soil	WQREWTEPAASRPSLAHEFGRMNAELERLRAILHEQGIEPGGSPA
Ga0335077_112269442	3300033158	Soil	QERQLLAARAGQEKEWTEAAAGRVPLAQELARVKAELERLRAVLREHDIAPGDDAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054710

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences